HEADER HYDROLASE 28-JUL-10 3O61 TITLE STRUCTURE OF THE E100A E.COLI GDP-MANNOSE HYDROLASE (YFFH) IN COMPLEX TITLE 2 WITH GDP-MANNOSE AND MG++ COMPND MOL_ID: 1; COMPND 2 MOLECULE: GDP-MANNOSE PYROPHOSPHATASE NUDK; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.6.1.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B2467, JW2451, NUDK, YFFH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24A KEYWDS NUDIX, GDP_MANNOSE, HYDROLASE, BIOFILM EXPDTA X-RAY DIFFRACTION AUTHOR L.M.AMZEL,S.B.GABELLI,A.N.BOTO REVDAT 4 06-SEP-23 3O61 1 REMARK SEQADV LINK REVDAT 3 10-AUG-11 3O61 1 JRNL REVDAT 2 13-JUL-11 3O61 1 JRNL REVDAT 1 11-MAY-11 3O61 0 JRNL AUTH A.N.BOTO,W.XU,J.JAKONCIC,A.PANNURI,T.ROMEO,M.J.BESSMAN, JRNL AUTH 2 S.B.GABELLI,L.M.AMZEL JRNL TITL STRUCTURAL STUDIES OF THE NUDIX GDP-MANNOSE HYDROLASE FROM JRNL TITL 2 E. COLI REVEALS A NEW MOTIF FOR MANNOSE RECOGNITION. JRNL REF PROTEINS V. 79 2455 2011 JRNL REFN ISSN 0887-3585 JRNL PMID 21638333 JRNL DOI 10.1002/PROT.23069 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 32614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1644 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.52 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1449 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.3790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5971 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 163 REMARK 3 SOLVENT ATOMS : 112 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.30000 REMARK 3 B22 (A**2) : 7.41000 REMARK 3 B33 (A**2) : -1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.64000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.333 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.244 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.735 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.892 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6224 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8432 ; 1.584 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 739 ; 6.714 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 301 ;34.857 ;24.817 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1126 ;18.397 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;16.159 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 975 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4552 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2744 ; 0.228 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4153 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 296 ; 0.182 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 4 ; 0.136 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 22 ; 0.195 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.173 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3679 ; 0.575 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5945 ; 1.052 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2639 ; 1.697 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2487 ; 2.627 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 3846 REMARK 3 ORIGIN FOR THE GROUP (A): 19.9490 29.2910 102.2940 REMARK 3 T TENSOR REMARK 3 T11: -0.0979 T22: -0.0588 REMARK 3 T33: -0.0643 T12: -0.0458 REMARK 3 T13: -0.0149 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 2.0419 L22: 2.5776 REMARK 3 L33: 4.2732 L12: -1.0294 REMARK 3 L13: -1.4174 L23: 2.1478 REMARK 3 S TENSOR REMARK 3 S11: 0.1876 S12: -0.2758 S13: 0.3134 REMARK 3 S21: 0.1023 S22: -0.0519 S23: -0.0927 REMARK 3 S31: -0.1706 S32: 0.0739 S33: -0.1357 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 3846 REMARK 3 ORIGIN FOR THE GROUP (A): 10.8250 26.4760 91.8400 REMARK 3 T TENSOR REMARK 3 T11: -0.0584 T22: -0.0251 REMARK 3 T33: -0.1022 T12: 0.0748 REMARK 3 T13: -0.0191 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 4.3060 L22: 1.1110 REMARK 3 L33: 2.8919 L12: 0.2680 REMARK 3 L13: -1.5448 L23: -0.4652 REMARK 3 S TENSOR REMARK 3 S11: 0.1264 S12: 0.3590 S13: 0.2161 REMARK 3 S21: 0.0030 S22: -0.0641 S23: 0.1829 REMARK 3 S31: -0.1484 S32: -0.6356 S33: -0.0623 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 3846 REMARK 3 ORIGIN FOR THE GROUP (A): 35.7090 37.9260 145.2970 REMARK 3 T TENSOR REMARK 3 T11: -0.0545 T22: -0.0818 REMARK 3 T33: -0.1437 T12: -0.0793 REMARK 3 T13: -0.0290 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 3.8019 L22: 1.1219 REMARK 3 L33: 2.1518 L12: -0.3122 REMARK 3 L13: 0.8340 L23: -0.2625 REMARK 3 S TENSOR REMARK 3 S11: 0.0347 S12: -0.1605 S13: -0.0489 REMARK 3 S21: 0.0333 S22: -0.0282 S23: 0.1127 REMARK 3 S31: 0.1483 S32: -0.4545 S33: -0.0065 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 3846 REMARK 3 ORIGIN FOR THE GROUP (A): 44.5120 34.6620 135.2100 REMARK 3 T TENSOR REMARK 3 T11: -0.0965 T22: -0.0776 REMARK 3 T33: -0.1108 T12: 0.0027 REMARK 3 T13: -0.0370 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 1.3693 L22: 2.6022 REMARK 3 L33: 3.3139 L12: 0.5470 REMARK 3 L13: 0.7814 L23: 1.5852 REMARK 3 S TENSOR REMARK 3 S11: 0.1604 S12: 0.3062 S13: -0.1477 REMARK 3 S21: -0.1207 S22: -0.0430 S23: -0.1791 REMARK 3 S31: 0.1979 S32: 0.0584 S33: -0.1175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3O61 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000060709. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32636 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 32.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.16500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3O52 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-26% PEG 3350, 0.2 M MG CL, 0.1 M REMARK 280 TRIS HCL PH 8.5, 4MM GDP-MANNOSE AT A RATIO OF 1:1 PROTEIN: REMARK 280 RESERVOIR, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.91200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 147 REMARK 465 VAL A 148 REMARK 465 GLU A 149 REMARK 465 ASP A 150 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLU B 149 REMARK 465 ASP B 150 REMARK 465 MET C 1 REMARK 465 ASN C 143 REMARK 465 ALA C 144 REMARK 465 GLY C 145 REMARK 465 GLY C 146 REMARK 465 GLY C 147 REMARK 465 VAL C 148 REMARK 465 GLU C 149 REMARK 465 ASP C 150 REMARK 465 MET D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU C 127 O41 GDD C 3846 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL D 68 CB - CA - C ANGL. DEV. = -13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 2 -97.77 -49.71 REMARK 500 GLN A 4 90.02 59.79 REMARK 500 SER A 14 130.06 -170.83 REMARK 500 ASP A 89 -122.87 51.25 REMARK 500 LEU A 115 -67.28 -100.54 REMARK 500 SER A 121 66.54 -155.10 REMARK 500 GLU A 127 113.56 -36.48 REMARK 500 ASN A 143 -156.27 -143.86 REMARK 500 ASP A 152 25.18 -63.36 REMARK 500 ARG A 173 35.54 -145.30 REMARK 500 HIS A 188 -4.95 72.86 REMARK 500 TYR B 17 -65.03 -145.41 REMARK 500 LYS B 30 28.68 -67.32 REMARK 500 ASP B 31 -32.25 -134.73 REMARK 500 ASN B 90 -6.83 65.58 REMARK 500 ALA B 134 145.21 -170.69 REMARK 500 ALA B 142 -49.35 -139.75 REMARK 500 ASN B 143 -166.90 -128.50 REMARK 500 ARG B 173 29.12 -152.74 REMARK 500 HIS B 188 -7.67 69.97 REMARK 500 GLN C 3 -73.67 153.58 REMARK 500 TYR C 17 -57.21 -125.89 REMARK 500 ARG C 29 162.28 -46.06 REMARK 500 ASP C 89 -124.54 46.90 REMARK 500 SER C 121 71.83 -154.77 REMARK 500 GLU C 127 129.86 -36.93 REMARK 500 HIS C 188 7.05 81.59 REMARK 500 ASN D 16 -110.30 -72.00 REMARK 500 ASP D 89 -97.29 48.34 REMARK 500 GLN D 140 -1.38 -58.22 REMARK 500 ASN D 143 -155.96 -159.07 REMARK 500 GLU D 149 -66.73 62.84 REMARK 500 ARG D 173 38.76 -147.56 REMARK 500 HIS D 188 -1.79 71.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 85 O REMARK 620 2 GLU A 104 OE2 80.2 REMARK 620 3 GLU A 104 OE1 80.6 48.5 REMARK 620 4 HOH A 206 O 85.2 117.5 69.3 REMARK 620 5 GDD A3846 O2B 89.7 155.4 151.7 83.5 REMARK 620 6 GDD A3846 O1A 90.0 75.3 123.8 165.1 82.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 85 O REMARK 620 2 GLU B 104 OE2 82.2 REMARK 620 3 HOH B 218 O 174.8 103.0 REMARK 620 4 HOH B 219 O 79.8 97.2 99.6 REMARK 620 5 GDD B3846 O1A 84.7 91.6 94.8 160.9 REMARK 620 6 GDD B3846 O2B 86.2 168.3 88.6 81.9 86.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 230 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 82 OE2 REMARK 620 2 SER C 83 O 105.3 REMARK 620 3 HOH C 217 O 131.0 114.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA C 85 O REMARK 620 2 GLU C 104 OE2 105.7 REMARK 620 3 HOH C 215 O 173.7 71.2 REMARK 620 4 HOH C 217 O 102.4 78.1 82.5 REMARK 620 5 GDD C3846 O2B 97.9 155.6 85.9 91.2 REMARK 620 6 GDD C3846 O1A 94.7 93.6 80.2 162.5 90.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA D 85 O REMARK 620 2 GLU D 104 OE2 101.4 REMARK 620 3 GLU D 104 OE1 73.7 46.7 REMARK 620 4 HOH D 223 O 83.7 97.2 57.7 REMARK 620 5 GDD D3846 O1A 99.2 88.5 129.2 173.0 REMARK 620 6 GDD D3846 O2B 87.0 170.2 133.4 78.6 95.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDD A 3846 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDD B 3846 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDD C 3846 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 230 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDD D 3846 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3O52 RELATED DB: PDB REMARK 900 E. COLI GDPMK IN COMPLEX WITH TARTRATE REMARK 900 RELATED ID: 3O69 RELATED DB: PDB REMARK 900 E. COLI GDPMK E100A MUTANT IN COMPLEX WITH MG++ REMARK 900 RELATED ID: 3O6Z RELATED DB: PDB REMARK 900 E. COLI GDPMK IN COMPLEX WITH MG++ DBREF 3O61 A 1 191 UNP P37128 NUDK_ECOLI 1 191 DBREF 3O61 B 1 191 UNP P37128 NUDK_ECOLI 1 191 DBREF 3O61 C 1 191 UNP P37128 NUDK_ECOLI 1 191 DBREF 3O61 D 1 191 UNP P37128 NUDK_ECOLI 1 191 SEQADV 3O61 ALA A 100 UNP P37128 GLU 100 ENGINEERED MUTATION SEQADV 3O61 ALA B 100 UNP P37128 GLU 100 ENGINEERED MUTATION SEQADV 3O61 ALA C 100 UNP P37128 GLU 100 ENGINEERED MUTATION SEQADV 3O61 ALA D 100 UNP P37128 GLU 100 ENGINEERED MUTATION SEQRES 1 A 191 MET THR GLN GLN ILE THR LEU ILE LYS ASP LYS ILE LEU SEQRES 2 A 191 SER ASP ASN TYR PHE THR LEU HIS ASN ILE THR TYR ASP SEQRES 3 A 191 LEU THR ARG LYS ASP GLY GLU VAL ILE ARG HIS LYS ARG SEQRES 4 A 191 GLU VAL TYR ASP ARG GLY ASN GLY ALA THR ILE LEU LEU SEQRES 5 A 191 TYR ASN THR LYS LYS LYS THR VAL VAL LEU ILE ARG GLN SEQRES 6 A 191 PHE ARG VAL ALA THR TRP VAL ASN GLY ASN GLU SER GLY SEQRES 7 A 191 GLN LEU ILE GLU SER CYS ALA GLY LEU LEU ASP ASN ASP SEQRES 8 A 191 GLU PRO GLU VAL CYS ILE ARG LYS ALA ALA ILE GLU GLU SEQRES 9 A 191 THR GLY TYR GLU VAL GLY GLU VAL ARG LYS LEU PHE GLU SEQRES 10 A 191 LEU TYR MET SER PRO GLY GLY VAL THR GLU LEU ILE HIS SEQRES 11 A 191 PHE PHE ILE ALA GLU TYR SER ASP ASN GLN ARG ALA ASN SEQRES 12 A 191 ALA GLY GLY GLY VAL GLU ASP GLU ASP ILE GLU VAL LEU SEQRES 13 A 191 GLU LEU PRO PHE SER GLN ALA LEU GLU MET ILE LYS THR SEQRES 14 A 191 GLY GLU ILE ARG ASP GLY LYS THR VAL LEU LEU LEU ASN SEQRES 15 A 191 TYR LEU GLN THR SER HIS LEU MET ASP SEQRES 1 B 191 MET THR GLN GLN ILE THR LEU ILE LYS ASP LYS ILE LEU SEQRES 2 B 191 SER ASP ASN TYR PHE THR LEU HIS ASN ILE THR TYR ASP SEQRES 3 B 191 LEU THR ARG LYS ASP GLY GLU VAL ILE ARG HIS LYS ARG SEQRES 4 B 191 GLU VAL TYR ASP ARG GLY ASN GLY ALA THR ILE LEU LEU SEQRES 5 B 191 TYR ASN THR LYS LYS LYS THR VAL VAL LEU ILE ARG GLN SEQRES 6 B 191 PHE ARG VAL ALA THR TRP VAL ASN GLY ASN GLU SER GLY SEQRES 7 B 191 GLN LEU ILE GLU SER CYS ALA GLY LEU LEU ASP ASN ASP SEQRES 8 B 191 GLU PRO GLU VAL CYS ILE ARG LYS ALA ALA ILE GLU GLU SEQRES 9 B 191 THR GLY TYR GLU VAL GLY GLU VAL ARG LYS LEU PHE GLU SEQRES 10 B 191 LEU TYR MET SER PRO GLY GLY VAL THR GLU LEU ILE HIS SEQRES 11 B 191 PHE PHE ILE ALA GLU TYR SER ASP ASN GLN ARG ALA ASN SEQRES 12 B 191 ALA GLY GLY GLY VAL GLU ASP GLU ASP ILE GLU VAL LEU SEQRES 13 B 191 GLU LEU PRO PHE SER GLN ALA LEU GLU MET ILE LYS THR SEQRES 14 B 191 GLY GLU ILE ARG ASP GLY LYS THR VAL LEU LEU LEU ASN SEQRES 15 B 191 TYR LEU GLN THR SER HIS LEU MET ASP SEQRES 1 C 191 MET THR GLN GLN ILE THR LEU ILE LYS ASP LYS ILE LEU SEQRES 2 C 191 SER ASP ASN TYR PHE THR LEU HIS ASN ILE THR TYR ASP SEQRES 3 C 191 LEU THR ARG LYS ASP GLY GLU VAL ILE ARG HIS LYS ARG SEQRES 4 C 191 GLU VAL TYR ASP ARG GLY ASN GLY ALA THR ILE LEU LEU SEQRES 5 C 191 TYR ASN THR LYS LYS LYS THR VAL VAL LEU ILE ARG GLN SEQRES 6 C 191 PHE ARG VAL ALA THR TRP VAL ASN GLY ASN GLU SER GLY SEQRES 7 C 191 GLN LEU ILE GLU SER CYS ALA GLY LEU LEU ASP ASN ASP SEQRES 8 C 191 GLU PRO GLU VAL CYS ILE ARG LYS ALA ALA ILE GLU GLU SEQRES 9 C 191 THR GLY TYR GLU VAL GLY GLU VAL ARG LYS LEU PHE GLU SEQRES 10 C 191 LEU TYR MET SER PRO GLY GLY VAL THR GLU LEU ILE HIS SEQRES 11 C 191 PHE PHE ILE ALA GLU TYR SER ASP ASN GLN ARG ALA ASN SEQRES 12 C 191 ALA GLY GLY GLY VAL GLU ASP GLU ASP ILE GLU VAL LEU SEQRES 13 C 191 GLU LEU PRO PHE SER GLN ALA LEU GLU MET ILE LYS THR SEQRES 14 C 191 GLY GLU ILE ARG ASP GLY LYS THR VAL LEU LEU LEU ASN SEQRES 15 C 191 TYR LEU GLN THR SER HIS LEU MET ASP SEQRES 1 D 191 MET THR GLN GLN ILE THR LEU ILE LYS ASP LYS ILE LEU SEQRES 2 D 191 SER ASP ASN TYR PHE THR LEU HIS ASN ILE THR TYR ASP SEQRES 3 D 191 LEU THR ARG LYS ASP GLY GLU VAL ILE ARG HIS LYS ARG SEQRES 4 D 191 GLU VAL TYR ASP ARG GLY ASN GLY ALA THR ILE LEU LEU SEQRES 5 D 191 TYR ASN THR LYS LYS LYS THR VAL VAL LEU ILE ARG GLN SEQRES 6 D 191 PHE ARG VAL ALA THR TRP VAL ASN GLY ASN GLU SER GLY SEQRES 7 D 191 GLN LEU ILE GLU SER CYS ALA GLY LEU LEU ASP ASN ASP SEQRES 8 D 191 GLU PRO GLU VAL CYS ILE ARG LYS ALA ALA ILE GLU GLU SEQRES 9 D 191 THR GLY TYR GLU VAL GLY GLU VAL ARG LYS LEU PHE GLU SEQRES 10 D 191 LEU TYR MET SER PRO GLY GLY VAL THR GLU LEU ILE HIS SEQRES 11 D 191 PHE PHE ILE ALA GLU TYR SER ASP ASN GLN ARG ALA ASN SEQRES 12 D 191 ALA GLY GLY GLY VAL GLU ASP GLU ASP ILE GLU VAL LEU SEQRES 13 D 191 GLU LEU PRO PHE SER GLN ALA LEU GLU MET ILE LYS THR SEQRES 14 D 191 GLY GLU ILE ARG ASP GLY LYS THR VAL LEU LEU LEU ASN SEQRES 15 D 191 TYR LEU GLN THR SER HIS LEU MET ASP HET GDD A3846 39 HET MG A 202 1 HET NA A 204 1 HET GDD B3846 39 HET MG B 202 1 HET GDD C3846 39 HET MG C 202 1 HET NA C 230 1 HET CL C 240 1 HET GDD D3846 39 HET MG D 202 1 HETNAM GDD GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION FORMUL 5 GDD 4(C16 H25 N5 O16 P2) FORMUL 6 MG 4(MG 2+) FORMUL 7 NA 2(NA 1+) FORMUL 13 CL CL 1- FORMUL 16 HOH *112(H2 O) HELIX 1 1 ARG A 67 VAL A 72 1 6 HELIX 2 2 GLU A 92 THR A 105 1 14 HELIX 3 3 SER A 137 ARG A 141 5 5 HELIX 4 4 PHE A 160 GLY A 170 1 11 HELIX 5 5 ASP A 174 HIS A 188 1 15 HELIX 6 6 ARG B 67 VAL B 72 1 6 HELIX 7 7 GLU B 92 GLY B 106 1 15 HELIX 8 8 SER B 137 ARG B 141 5 5 HELIX 9 9 PHE B 160 THR B 169 1 10 HELIX 10 10 ASP B 174 HIS B 188 1 15 HELIX 11 11 ARG C 67 VAL C 72 1 6 HELIX 12 12 GLU C 92 THR C 105 1 14 HELIX 13 13 PHE C 160 GLY C 170 1 11 HELIX 14 14 ASP C 174 HIS C 188 1 15 HELIX 15 15 ARG D 67 VAL D 72 1 6 HELIX 16 16 GLU D 92 THR D 105 1 14 HELIX 17 17 PHE D 160 THR D 169 1 10 HELIX 18 18 ASP D 174 HIS D 188 1 15 SHEET 1 A 3 GLN A 3 SER A 14 0 SHEET 2 A 3 THR A 19 THR A 28 -1 O ASN A 22 N LYS A 11 SHEET 3 A 3 VAL A 34 ASP A 43 -1 O VAL A 41 N HIS A 21 SHEET 1 B 5 GLN A 79 GLU A 82 0 SHEET 2 B 5 THR A 59 PHE A 66 -1 N ILE A 63 O GLU A 82 SHEET 3 B 5 GLY A 47 ASN A 54 -1 N LEU A 52 O VAL A 61 SHEET 4 B 5 LEU A 128 GLU A 135 1 O LEU A 128 N GLY A 47 SHEET 5 B 5 ARG A 113 TYR A 119 -1 N ARG A 113 O ILE A 133 SHEET 1 C 4 ALA A 85 LEU A 87 0 SHEET 2 C 4 GLY A 47 ASN A 54 -1 N ALA A 48 O GLY A 86 SHEET 3 C 4 THR A 59 PHE A 66 -1 O VAL A 61 N LEU A 52 SHEET 4 C 4 GLU A 154 PRO A 159 -1 O LEU A 156 N LEU A 62 SHEET 1 D 3 ILE B 5 SER B 14 0 SHEET 2 D 3 THR B 19 THR B 28 -1 O THR B 24 N ILE B 8 SHEET 3 D 3 VAL B 34 ASP B 43 -1 O VAL B 41 N HIS B 21 SHEET 1 E 5 GLN B 79 GLU B 82 0 SHEET 2 E 5 THR B 59 PHE B 66 -1 N ILE B 63 O GLU B 82 SHEET 3 E 5 GLY B 47 ASN B 54 -1 N LEU B 52 O VAL B 61 SHEET 4 E 5 LEU B 128 GLU B 135 1 O HIS B 130 N GLY B 47 SHEET 5 E 5 ARG B 113 TYR B 119 -1 N LEU B 118 O ILE B 129 SHEET 1 F 4 CYS B 84 LEU B 87 0 SHEET 2 F 4 GLY B 47 ASN B 54 -1 N ILE B 50 O CYS B 84 SHEET 3 F 4 THR B 59 PHE B 66 -1 O VAL B 61 N LEU B 52 SHEET 4 F 4 GLU B 154 PRO B 159 -1 O LEU B 158 N VAL B 60 SHEET 1 G 3 ILE C 5 SER C 14 0 SHEET 2 G 3 THR C 19 THR C 28 -1 O ASN C 22 N LYS C 11 SHEET 3 G 3 VAL C 34 ASP C 43 -1 O HIS C 37 N TYR C 25 SHEET 1 H 5 GLN C 79 GLU C 82 0 SHEET 2 H 5 THR C 59 PHE C 66 -1 N ILE C 63 O GLU C 82 SHEET 3 H 5 GLY C 47 ASN C 54 -1 N ASN C 54 O THR C 59 SHEET 4 H 5 LEU C 128 GLU C 135 1 O ALA C 134 N TYR C 53 SHEET 5 H 5 VAL C 112 TYR C 119 -1 N LEU C 118 O ILE C 129 SHEET 1 I 4 CYS C 84 LEU C 87 0 SHEET 2 I 4 GLY C 47 ASN C 54 -1 N ILE C 50 O CYS C 84 SHEET 3 I 4 THR C 59 PHE C 66 -1 O THR C 59 N ASN C 54 SHEET 4 I 4 GLU C 154 PRO C 159 -1 O LEU C 156 N LEU C 62 SHEET 1 J 3 GLN D 4 ASP D 15 0 SHEET 2 J 3 THR D 19 THR D 28 -1 O ASN D 22 N LYS D 11 SHEET 3 J 3 VAL D 34 ASP D 43 -1 O ASP D 43 N THR D 19 SHEET 1 K 5 GLN D 79 GLU D 82 0 SHEET 2 K 5 THR D 59 PHE D 66 -1 N GLN D 65 O LEU D 80 SHEET 3 K 5 GLY D 47 ASN D 54 -1 N ASN D 54 O THR D 59 SHEET 4 K 5 LEU D 128 GLU D 135 1 O ALA D 134 N LEU D 51 SHEET 5 K 5 ARG D 113 TYR D 119 -1 N ARG D 113 O ILE D 133 SHEET 1 L 4 CYS D 84 LEU D 87 0 SHEET 2 L 4 GLY D 47 ASN D 54 -1 N ILE D 50 O CYS D 84 SHEET 3 L 4 THR D 59 PHE D 66 -1 O THR D 59 N ASN D 54 SHEET 4 L 4 GLU D 154 PRO D 159 -1 O LEU D 156 N LEU D 62 LINK OG1 THR A 19 NA NA A 204 1555 1555 2.59 LINK O ALA A 85 MG MG A 202 1555 1555 2.27 LINK OE2 GLU A 104 MG MG A 202 1555 1555 2.33 LINK OE1 GLU A 104 MG MG A 202 1555 1555 2.88 LINK MG MG A 202 O HOH A 206 1555 1555 2.01 LINK MG MG A 202 O2B GDD A3846 1555 1555 2.03 LINK MG MG A 202 O1A GDD A3846 1555 1555 2.35 LINK O ALA B 85 MG MG B 202 1555 1555 2.29 LINK OE2 GLU B 104 MG MG B 202 1555 1555 1.93 LINK MG MG B 202 O HOH B 218 1555 1555 2.50 LINK MG MG B 202 O HOH B 219 1555 1555 2.30 LINK MG MG B 202 O1A GDD B3846 1555 1555 2.08 LINK MG MG B 202 O2B GDD B3846 1555 1555 2.10 LINK OE2 GLU C 82 NA NA C 230 1555 1555 2.67 LINK O SER C 83 NA NA C 230 1555 1555 3.11 LINK O ALA C 85 MG MG C 202 1555 1555 1.95 LINK OE2 GLU C 104 MG MG C 202 1555 1555 2.11 LINK MG MG C 202 O HOH C 215 1555 1555 2.36 LINK MG MG C 202 O HOH C 217 1555 1555 2.18 LINK MG MG C 202 O2B GDD C3846 1555 1555 1.74 LINK MG MG C 202 O1A GDD C3846 1555 1555 2.16 LINK O HOH C 217 NA NA C 230 1555 1555 2.36 LINK O ALA D 85 MG MG D 202 1555 1555 2.13 LINK OE2 GLU D 104 MG MG D 202 1555 1555 2.12 LINK OE1 GLU D 104 MG MG D 202 1555 1555 2.97 LINK MG MG D 202 O HOH D 223 1555 1555 2.34 LINK MG MG D 202 O1A GDD D3846 1555 1555 2.11 LINK MG MG D 202 O2B GDD D3846 1555 1555 2.21 CISPEP 1 GLU C 151 ASP C 152 0 -0.01 SITE 1 AC1 20 TYR A 17 GLY A 47 ALA A 48 ARG A 67 SITE 2 AC1 20 ALA A 85 GLY A 86 LEU A 87 GLU A 104 SITE 3 AC1 20 GLU A 127 ILE A 129 GLU A 151 LYS A 176 SITE 4 AC1 20 MG A 202 HOH A 206 HOH A 210 LYS B 38 SITE 5 AC1 20 ARG B 39 GLU B 40 SER B 121 PRO B 122 SITE 1 AC2 4 ALA A 85 GLU A 104 HOH A 206 GDD A3846 SITE 1 AC3 1 THR A 19 SITE 1 AC4 24 LYS A 38 ARG A 39 GLU A 40 SER A 121 SITE 2 AC4 24 PRO A 122 GLY A 123 HOH A 199 TYR B 17 SITE 3 AC4 24 PHE B 18 ARG B 44 GLY B 47 ARG B 67 SITE 4 AC4 24 ALA B 85 GLY B 86 LEU B 87 GLU B 104 SITE 5 AC4 24 GLU B 127 ILE B 129 GLU B 151 LYS B 176 SITE 6 AC4 24 HOH B 196 MG B 202 HOH B 204 HOH B 219 SITE 1 AC5 5 ALA B 85 GLU B 104 HOH B 218 HOH B 219 SITE 2 AC5 5 GDD B3846 SITE 1 AC6 24 TYR C 17 PHE C 18 ARG C 44 GLY C 47 SITE 2 AC6 24 ALA C 48 ARG C 67 ALA C 85 GLY C 86 SITE 3 AC6 24 LEU C 87 GLU C 104 GLU C 127 ILE C 129 SITE 4 AC6 24 LYS C 176 MG C 202 HOH C 209 HOH C 215 SITE 5 AC6 24 HOH C 217 NA C 230 LYS D 38 ARG D 39 SITE 6 AC6 24 GLU D 40 SER D 121 PRO D 122 GLY D 123 SITE 1 AC7 5 ALA C 85 GLU C 104 HOH C 215 HOH C 217 SITE 2 AC7 5 GDD C3846 SITE 1 AC8 6 ARG C 67 GLU C 82 SER C 83 ALA C 85 SITE 2 AC8 6 HOH C 217 GDD C3846 SITE 1 AC9 19 LYS C 38 ARG C 39 GLU C 40 SER C 121 SITE 2 AC9 19 PRO C 122 TYR D 17 ARG D 44 ARG D 67 SITE 3 AC9 19 ALA D 85 GLY D 86 LEU D 87 GLU D 104 SITE 4 AC9 19 GLU D 127 ILE D 129 ASP D 150 GLU D 151 SITE 5 AC9 19 LYS D 176 MG D 202 HOH D 223 SITE 1 BC1 4 ALA D 85 GLU D 104 HOH D 223 GDD D3846 CRYST1 54.276 55.824 158.121 90.00 91.71 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018424 0.000000 0.000550 0.00000 SCALE2 0.000000 0.017913 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006327 0.00000