HEADER OXIDOREDUCTASE 04-AUG-10 3O9Z TITLE CRYSTAL STRUCTURE OF THE WLBA (WBPB) DEHYDROGENASE FROM THERMUS TITLE 2 THERMOPHILUS IN COMPLEX WITH NAD AND ALPHA-KETOGLUTARATE AT 1.45 TITLE 3 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOPOLYSACCHARIDE BIOSYNTHESIS PROTEIN WBPB; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 262724; SOURCE 4 STRAIN: HB27 / ATCC BAA-163 / DSM 7039; SOURCE 5 GENE: TT_C0287, WBPB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS OXIDOREDUCTASE, SUGAR BIOSYNTHESIS, DEHYDROGENASE EXPDTA X-RAY DIFFRACTION AUTHOR H.M.HOLDEN,J.B.THODEN REVDAT 4 21-FEB-24 3O9Z 1 REMARK SEQADV REVDAT 3 22-SEP-10 3O9Z 1 JRNL REVDAT 2 25-AUG-10 3O9Z 1 JRNL REVDAT 1 18-AUG-10 3O9Z 0 JRNL AUTH J.B.THODEN,H.M.HOLDEN JRNL TITL STRUCTURAL AND FUNCTIONAL STUDIES OF WLBA: A DEHYDROGENASE JRNL TITL 2 INVOLVED IN THE BIOSYNTHESIS OF JRNL TITL 3 2,3-DIACETAMIDO-2,3-DIDEOXY-D-MANNURONIC ACID . JRNL REF BIOCHEMISTRY V. 49 7939 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20690587 JRNL DOI 10.1021/BI101103S REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 270490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 13628 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 17112 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 935 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9799 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 232 REMARK 3 SOLVENT ATOMS : 1216 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.70000 REMARK 3 B22 (A**2) : -0.58000 REMARK 3 B33 (A**2) : -1.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.30000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.045 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.141 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10362 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14129 ; 2.348 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1259 ; 7.308 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 471 ;31.505 ;22.208 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1683 ;15.225 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 105 ;20.726 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1545 ; 0.141 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7911 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1551 ; 1.772 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2489 ; 2.524 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1006 ; 3.725 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 981 ; 5.751 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3O9Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000060851. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918,0.97953,0.97150 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI-111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 270515 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.449 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 44.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.16700 REMARK 200 R SYM FOR SHELL (I) : 0.16700 REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15-20% PEG-5000, 100 MM MOPS, 20 MM REMARK 280 ALPHA-KETOGLUTARATE, PH 7, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.09950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -77.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 GLY C -1 REMARK 465 HIS C 0 REMARK 465 GLY D -1 REMARK 465 HIS D 0 REMARK 465 GLY D 310 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU C 146 CG LYS C 147 1.18 REMARK 500 OH TYR D 156 NH1 ARG D 245 1.77 REMARK 500 CG LEU D 136 CE1 PHE D 256 1.91 REMARK 500 OE1 GLU B 146 OD1 ASP B 250 1.92 REMARK 500 O HOH A 782 O HOH A 1141 1.95 REMARK 500 O HOH C 669 O HOH C 1203 1.95 REMARK 500 OH TYR D 156 O4 AKG D 312 1.95 REMARK 500 CD1 LEU D 136 CE1 PHE D 256 1.95 REMARK 500 O HOH D 458 O HOH D 651 1.96 REMARK 500 O HOH D 475 O HOH D 720 1.96 REMARK 500 O HOH C 725 O HOH C 1195 1.98 REMARK 500 O HOH C 873 O HOH C 914 2.01 REMARK 500 O HOH C 1088 O HOH D 759 2.03 REMARK 500 CD2 LEU D 136 CE1 PHE D 256 2.03 REMARK 500 O HOH A 1142 O HOH C 424 2.04 REMARK 500 O HOH A 715 O HOH A 820 2.04 REMARK 500 O HOH A 754 O HOH A 1080 2.05 REMARK 500 OD2 ASP A 280 O HOH A 977 2.07 REMARK 500 O HOH A 754 O HOH A 1081 2.07 REMARK 500 O HOH B 1092 O HOH B 1149 2.07 REMARK 500 O LEU D 137 O HOH D 770 2.07 REMARK 500 O HOH D 372 O HOH D 702 2.08 REMARK 500 O HOH C 623 O HOH C 729 2.10 REMARK 500 O HIS D 133 CD1 LEU D 137 2.11 REMARK 500 NZ LYS A 162 O HOH A 896 2.13 REMARK 500 O HOH C 342 O HOH D 863 2.14 REMARK 500 O GLU A 252 O HOH A 938 2.15 REMARK 500 O HOH B 771 O HOH B 1194 2.17 REMARK 500 OE1 GLU A 141 O HOH A 962 2.17 REMARK 500 O GLU A 141 O HOH A 1009 2.18 REMARK 500 NH1 ARG A 237 O HOH A 786 2.19 REMARK 500 O HOH A 1075 O HOH A 1136 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS D 147 O HOH D 1057 2746 1.82 REMARK 500 O HOH A 1207 O HOH C 829 2645 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU C 146 CG GLU C 146 CD 0.265 REMARK 500 GLU C 146 CD GLU C 146 OE1 -0.166 REMARK 500 GLU C 146 CD GLU C 146 OE2 -0.092 REMARK 500 LYS D 147 CD LYS D 147 CE -0.412 REMARK 500 LYS D 147 CE LYS D 147 NZ 0.386 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 57 CB - CG - CD1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG A 88 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 MET A 89 CG - SD - CE ANGL. DEV. = -10.7 DEGREES REMARK 500 ARG A 122 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 122 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG C 92 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG C 92 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 GLU C 146 CG - CD - OE1 ANGL. DEV. = 22.2 DEGREES REMARK 500 GLU C 146 CG - CD - OE2 ANGL. DEV. = -19.9 DEGREES REMARK 500 ARG C 287 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 GLU D 55 OE1 - CD - OE2 ANGL. DEV. = 8.7 DEGREES REMARK 500 ARG D 92 NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 PRO D 207 C - N - CA ANGL. DEV. = -10.1 DEGREES REMARK 500 ARG D 287 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 205 87.46 -154.96 REMARK 500 ASP B 66 2.40 -67.89 REMARK 500 GLU C 146 -111.26 -104.94 REMARK 500 LYS C 147 142.18 133.50 REMARK 500 ARG C 205 85.97 -151.13 REMARK 500 LEU D 128 78.39 -116.33 REMARK 500 ARG D 142 -71.60 -56.50 REMARK 500 THR D 261 31.98 -96.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU D 253 VAL D 254 146.26 REMARK 500 GLU D 255 PHE D 256 -149.85 REMARK 500 THR D 261 ASP D 262 -141.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG B 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD C 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG C 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD D 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG D 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D 313 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OA0 RELATED DB: PDB REMARK 900 HOMOLOGUE FROM THERMUS THERMOPHILUS IN COMPLEX WITH NAD AND UDP- REMARK 900 GLCNACA REMARK 900 RELATED ID: 3OA2 RELATED DB: PDB REMARK 900 HOMOLOGUE FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH NAD DBREF 3O9Z A 1 310 UNP Q72KX8 Q72KX8_THET2 1 310 DBREF 3O9Z B 1 310 UNP Q72KX8 Q72KX8_THET2 1 310 DBREF 3O9Z C 1 310 UNP Q72KX8 Q72KX8_THET2 1 310 DBREF 3O9Z D 1 310 UNP Q72KX8 Q72KX8_THET2 1 310 SEQADV 3O9Z GLY A -1 UNP Q72KX8 EXPRESSION TAG SEQADV 3O9Z HIS A 0 UNP Q72KX8 EXPRESSION TAG SEQADV 3O9Z GLY B -1 UNP Q72KX8 EXPRESSION TAG SEQADV 3O9Z HIS B 0 UNP Q72KX8 EXPRESSION TAG SEQADV 3O9Z GLY C -1 UNP Q72KX8 EXPRESSION TAG SEQADV 3O9Z HIS C 0 UNP Q72KX8 EXPRESSION TAG SEQADV 3O9Z GLY D -1 UNP Q72KX8 EXPRESSION TAG SEQADV 3O9Z HIS D 0 UNP Q72KX8 EXPRESSION TAG SEQRES 1 A 312 GLY HIS MET THR ARG PHE ALA LEU THR GLY LEU ALA GLY SEQRES 2 A 312 TYR ILE ALA PRO ARG HIS LEU LYS ALA ILE LYS GLU VAL SEQRES 3 A 312 GLY GLY VAL LEU VAL ALA SER LEU ASP PRO ALA THR ASN SEQRES 4 A 312 VAL GLY LEU VAL ASP SER PHE PHE PRO GLU ALA GLU PHE SEQRES 5 A 312 PHE THR GLU PRO GLU ALA PHE GLU ALA TYR LEU GLU ASP SEQRES 6 A 312 LEU ARG ASP ARG GLY GLU GLY VAL ASP TYR LEU SER ILE SEQRES 7 A 312 ALA SER PRO ASN HIS LEU HIS TYR PRO GLN ILE ARG MET SEQRES 8 A 312 ALA LEU ARG LEU GLY ALA ASN ALA LEU SER GLU LYS PRO SEQRES 9 A 312 LEU VAL LEU TRP PRO GLU GLU ILE ALA ARG LEU LYS GLU SEQRES 10 A 312 LEU GLU ALA ARG THR GLY ARG ARG VAL TYR THR VAL LEU SEQRES 11 A 312 GLN LEU ARG VAL HIS PRO SER LEU LEU ALA LEU LYS GLU SEQRES 12 A 312 ARG LEU GLY GLN GLU LYS GLY ALA LYS ASP VAL VAL LEU SEQRES 13 A 312 THR TYR VAL THR GLY ARG GLY LYS TRP TYR GLY LYS SER SEQRES 14 A 312 TRP LYS VAL ASP GLU ALA LYS SER GLY GLY LEU ALA THR SEQRES 15 A 312 ASN ILE GLY ILE HIS PHE PHE ASP LEU LEU ALA TRP LEU SEQRES 16 A 312 PHE GLY ARG ALA LEU HIS VAL GLU VAL HIS ALA ARG THR SEQRES 17 A 312 PRO THR VAL ASN ALA GLY TYR LEU GLU LEU GLU GLY ALA SEQRES 18 A 312 ARG VAL ARG TRP PHE LEU SER ILE ASP PRO SER PHE VAL SEQRES 19 A 312 PRO GLU PRO LEU ARG ARG GLN GLY LYS ARG THR TYR ARG SEQRES 20 A 312 SER ILE ALA VAL ASP GLY GLU GLU VAL GLU PHE SER GLU SEQRES 21 A 312 GLY PHE THR ASP LEU HIS THR GLU VAL TYR ARG LYS THR SEQRES 22 A 312 LEU ALA GLY GLU GLY PHE GLY LEU ASP GLU ALA ALA GLU SEQRES 23 A 312 ALA ILE ARG VAL ALA ALA LEU LEU ARG THR LEU PRO LEU SEQRES 24 A 312 SER GLN PRO SER PRO GLU ASN ARG HIS PRO PHE LEU GLY SEQRES 1 B 312 GLY HIS MET THR ARG PHE ALA LEU THR GLY LEU ALA GLY SEQRES 2 B 312 TYR ILE ALA PRO ARG HIS LEU LYS ALA ILE LYS GLU VAL SEQRES 3 B 312 GLY GLY VAL LEU VAL ALA SER LEU ASP PRO ALA THR ASN SEQRES 4 B 312 VAL GLY LEU VAL ASP SER PHE PHE PRO GLU ALA GLU PHE SEQRES 5 B 312 PHE THR GLU PRO GLU ALA PHE GLU ALA TYR LEU GLU ASP SEQRES 6 B 312 LEU ARG ASP ARG GLY GLU GLY VAL ASP TYR LEU SER ILE SEQRES 7 B 312 ALA SER PRO ASN HIS LEU HIS TYR PRO GLN ILE ARG MET SEQRES 8 B 312 ALA LEU ARG LEU GLY ALA ASN ALA LEU SER GLU LYS PRO SEQRES 9 B 312 LEU VAL LEU TRP PRO GLU GLU ILE ALA ARG LEU LYS GLU SEQRES 10 B 312 LEU GLU ALA ARG THR GLY ARG ARG VAL TYR THR VAL LEU SEQRES 11 B 312 GLN LEU ARG VAL HIS PRO SER LEU LEU ALA LEU LYS GLU SEQRES 12 B 312 ARG LEU GLY GLN GLU LYS GLY ALA LYS ASP VAL VAL LEU SEQRES 13 B 312 THR TYR VAL THR GLY ARG GLY LYS TRP TYR GLY LYS SER SEQRES 14 B 312 TRP LYS VAL ASP GLU ALA LYS SER GLY GLY LEU ALA THR SEQRES 15 B 312 ASN ILE GLY ILE HIS PHE PHE ASP LEU LEU ALA TRP LEU SEQRES 16 B 312 PHE GLY ARG ALA LEU HIS VAL GLU VAL HIS ALA ARG THR SEQRES 17 B 312 PRO THR VAL ASN ALA GLY TYR LEU GLU LEU GLU GLY ALA SEQRES 18 B 312 ARG VAL ARG TRP PHE LEU SER ILE ASP PRO SER PHE VAL SEQRES 19 B 312 PRO GLU PRO LEU ARG ARG GLN GLY LYS ARG THR TYR ARG SEQRES 20 B 312 SER ILE ALA VAL ASP GLY GLU GLU VAL GLU PHE SER GLU SEQRES 21 B 312 GLY PHE THR ASP LEU HIS THR GLU VAL TYR ARG LYS THR SEQRES 22 B 312 LEU ALA GLY GLU GLY PHE GLY LEU ASP GLU ALA ALA GLU SEQRES 23 B 312 ALA ILE ARG VAL ALA ALA LEU LEU ARG THR LEU PRO LEU SEQRES 24 B 312 SER GLN PRO SER PRO GLU ASN ARG HIS PRO PHE LEU GLY SEQRES 1 C 312 GLY HIS MET THR ARG PHE ALA LEU THR GLY LEU ALA GLY SEQRES 2 C 312 TYR ILE ALA PRO ARG HIS LEU LYS ALA ILE LYS GLU VAL SEQRES 3 C 312 GLY GLY VAL LEU VAL ALA SER LEU ASP PRO ALA THR ASN SEQRES 4 C 312 VAL GLY LEU VAL ASP SER PHE PHE PRO GLU ALA GLU PHE SEQRES 5 C 312 PHE THR GLU PRO GLU ALA PHE GLU ALA TYR LEU GLU ASP SEQRES 6 C 312 LEU ARG ASP ARG GLY GLU GLY VAL ASP TYR LEU SER ILE SEQRES 7 C 312 ALA SER PRO ASN HIS LEU HIS TYR PRO GLN ILE ARG MET SEQRES 8 C 312 ALA LEU ARG LEU GLY ALA ASN ALA LEU SER GLU LYS PRO SEQRES 9 C 312 LEU VAL LEU TRP PRO GLU GLU ILE ALA ARG LEU LYS GLU SEQRES 10 C 312 LEU GLU ALA ARG THR GLY ARG ARG VAL TYR THR VAL LEU SEQRES 11 C 312 GLN LEU ARG VAL HIS PRO SER LEU LEU ALA LEU LYS GLU SEQRES 12 C 312 ARG LEU GLY GLN GLU LYS GLY ALA LYS ASP VAL VAL LEU SEQRES 13 C 312 THR TYR VAL THR GLY ARG GLY LYS TRP TYR GLY LYS SER SEQRES 14 C 312 TRP LYS VAL ASP GLU ALA LYS SER GLY GLY LEU ALA THR SEQRES 15 C 312 ASN ILE GLY ILE HIS PHE PHE ASP LEU LEU ALA TRP LEU SEQRES 16 C 312 PHE GLY ARG ALA LEU HIS VAL GLU VAL HIS ALA ARG THR SEQRES 17 C 312 PRO THR VAL ASN ALA GLY TYR LEU GLU LEU GLU GLY ALA SEQRES 18 C 312 ARG VAL ARG TRP PHE LEU SER ILE ASP PRO SER PHE VAL SEQRES 19 C 312 PRO GLU PRO LEU ARG ARG GLN GLY LYS ARG THR TYR ARG SEQRES 20 C 312 SER ILE ALA VAL ASP GLY GLU GLU VAL GLU PHE SER GLU SEQRES 21 C 312 GLY PHE THR ASP LEU HIS THR GLU VAL TYR ARG LYS THR SEQRES 22 C 312 LEU ALA GLY GLU GLY PHE GLY LEU ASP GLU ALA ALA GLU SEQRES 23 C 312 ALA ILE ARG VAL ALA ALA LEU LEU ARG THR LEU PRO LEU SEQRES 24 C 312 SER GLN PRO SER PRO GLU ASN ARG HIS PRO PHE LEU GLY SEQRES 1 D 312 GLY HIS MET THR ARG PHE ALA LEU THR GLY LEU ALA GLY SEQRES 2 D 312 TYR ILE ALA PRO ARG HIS LEU LYS ALA ILE LYS GLU VAL SEQRES 3 D 312 GLY GLY VAL LEU VAL ALA SER LEU ASP PRO ALA THR ASN SEQRES 4 D 312 VAL GLY LEU VAL ASP SER PHE PHE PRO GLU ALA GLU PHE SEQRES 5 D 312 PHE THR GLU PRO GLU ALA PHE GLU ALA TYR LEU GLU ASP SEQRES 6 D 312 LEU ARG ASP ARG GLY GLU GLY VAL ASP TYR LEU SER ILE SEQRES 7 D 312 ALA SER PRO ASN HIS LEU HIS TYR PRO GLN ILE ARG MET SEQRES 8 D 312 ALA LEU ARG LEU GLY ALA ASN ALA LEU SER GLU LYS PRO SEQRES 9 D 312 LEU VAL LEU TRP PRO GLU GLU ILE ALA ARG LEU LYS GLU SEQRES 10 D 312 LEU GLU ALA ARG THR GLY ARG ARG VAL TYR THR VAL LEU SEQRES 11 D 312 GLN LEU ARG VAL HIS PRO SER LEU LEU ALA LEU LYS GLU SEQRES 12 D 312 ARG LEU GLY GLN GLU LYS GLY ALA LYS ASP VAL VAL LEU SEQRES 13 D 312 THR TYR VAL THR GLY ARG GLY LYS TRP TYR GLY LYS SER SEQRES 14 D 312 TRP LYS VAL ASP GLU ALA LYS SER GLY GLY LEU ALA THR SEQRES 15 D 312 ASN ILE GLY ILE HIS PHE PHE ASP LEU LEU ALA TRP LEU SEQRES 16 D 312 PHE GLY ARG ALA LEU HIS VAL GLU VAL HIS ALA ARG THR SEQRES 17 D 312 PRO THR VAL ASN ALA GLY TYR LEU GLU LEU GLU GLY ALA SEQRES 18 D 312 ARG VAL ARG TRP PHE LEU SER ILE ASP PRO SER PHE VAL SEQRES 19 D 312 PRO GLU PRO LEU ARG ARG GLN GLY LYS ARG THR TYR ARG SEQRES 20 D 312 SER ILE ALA VAL ASP GLY GLU GLU VAL GLU PHE SER GLU SEQRES 21 D 312 GLY PHE THR ASP LEU HIS THR GLU VAL TYR ARG LYS THR SEQRES 22 D 312 LEU ALA GLY GLU GLY PHE GLY LEU ASP GLU ALA ALA GLU SEQRES 23 D 312 ALA ILE ARG VAL ALA ALA LEU LEU ARG THR LEU PRO LEU SEQRES 24 D 312 SER GLN PRO SER PRO GLU ASN ARG HIS PRO PHE LEU GLY HET NAD A 311 44 HET AKG A 312 10 HET CL A 313 1 HET NAD B 311 44 HET AKG B 312 10 HET EDO B 313 4 HET EDO B 314 4 HET CL B 315 1 HET NAD C 311 44 HET AKG C 312 10 HET EDO C 313 4 HET CL C 314 1 HET NAD D 311 44 HET AKG D 312 10 HET CL D 313 1 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM AKG 2-OXOGLUTARIC ACID HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 NAD 4(C21 H27 N7 O14 P2) FORMUL 6 AKG 4(C5 H6 O5) FORMUL 7 CL 4(CL 1-) FORMUL 10 EDO 3(C2 H6 O2) FORMUL 20 HOH *1216(H2 O) HELIX 1 1 ILE A 13 VAL A 24 1 12 HELIX 2 2 VAL A 38 PHE A 44 5 7 HELIX 3 3 GLU A 53 ARG A 67 1 15 HELIX 4 4 PRO A 79 HIS A 81 5 3 HELIX 5 5 LEU A 82 LEU A 93 1 12 HELIX 6 6 TRP A 106 GLY A 121 1 16 HELIX 7 7 LEU A 128 VAL A 132 5 5 HELIX 8 8 HIS A 133 GLN A 145 1 13 HELIX 9 9 TRP A 163 VAL A 170 5 8 HELIX 10 10 ASP A 171 GLY A 176 1 6 HELIX 11 11 GLY A 177 ILE A 182 1 6 HELIX 12 12 GLY A 183 GLY A 195 1 13 HELIX 13 13 ASP A 228 VAL A 232 5 5 HELIX 14 14 PRO A 233 ARG A 238 1 6 HELIX 15 15 LEU A 263 ALA A 273 1 11 HELIX 16 16 LEU A 279 ARG A 293 1 15 HELIX 17 17 SER A 301 ARG A 305 5 5 HELIX 18 18 HIS A 306 GLY A 310 5 5 HELIX 19 19 ILE B 13 VAL B 24 1 12 HELIX 20 20 VAL B 38 PHE B 44 5 7 HELIX 21 21 GLU B 53 ASP B 66 1 14 HELIX 22 22 PRO B 79 HIS B 81 5 3 HELIX 23 23 LEU B 82 LEU B 93 1 12 HELIX 24 24 TRP B 106 GLY B 121 1 16 HELIX 25 25 LEU B 128 VAL B 132 5 5 HELIX 26 26 HIS B 133 GLY B 144 1 12 HELIX 27 27 TRP B 163 VAL B 170 5 8 HELIX 28 28 ASP B 171 GLY B 176 1 6 HELIX 29 29 GLY B 177 ILE B 182 1 6 HELIX 30 30 GLY B 183 GLY B 195 1 13 HELIX 31 31 ASP B 228 VAL B 232 5 5 HELIX 32 32 PRO B 233 GLN B 239 1 7 HELIX 33 33 LEU B 263 ALA B 273 1 11 HELIX 34 34 GLY B 278 ARG B 293 1 16 HELIX 35 35 SER B 301 ARG B 305 5 5 HELIX 36 36 HIS B 306 GLY B 310 5 5 HELIX 37 37 ILE C 13 VAL C 24 1 12 HELIX 38 38 VAL C 38 PHE C 44 5 7 HELIX 39 39 GLU C 53 ARG C 67 1 15 HELIX 40 40 PRO C 79 HIS C 81 5 3 HELIX 41 41 LEU C 82 LEU C 93 1 12 HELIX 42 42 TRP C 106 GLY C 121 1 16 HELIX 43 43 LEU C 128 VAL C 132 5 5 HELIX 44 44 HIS C 133 GLN C 145 1 13 HELIX 45 45 TRP C 163 VAL C 170 5 8 HELIX 46 46 ASP C 171 GLY C 176 1 6 HELIX 47 47 GLY C 177 ILE C 182 1 6 HELIX 48 48 GLY C 183 GLY C 195 1 13 HELIX 49 49 ASP C 228 VAL C 232 5 5 HELIX 50 50 PRO C 233 ARG C 238 1 6 HELIX 51 51 LEU C 263 ALA C 273 1 11 HELIX 52 52 LEU C 279 LEU C 295 1 17 HELIX 53 53 SER C 301 ARG C 305 5 5 HELIX 54 54 HIS C 306 GLY C 310 5 5 HELIX 55 55 ILE D 13 VAL D 24 1 12 HELIX 56 56 VAL D 38 PHE D 44 5 7 HELIX 57 57 GLU D 53 ARG D 67 1 15 HELIX 58 58 PRO D 79 HIS D 81 5 3 HELIX 59 59 LEU D 82 LEU D 93 1 12 HELIX 60 60 TRP D 106 GLY D 121 1 16 HELIX 61 61 LEU D 128 VAL D 132 5 5 HELIX 62 62 HIS D 133 GLY D 144 1 12 HELIX 63 63 TRP D 163 VAL D 170 5 8 HELIX 64 64 ASP D 171 GLY D 176 1 6 HELIX 65 65 GLY D 177 ILE D 182 1 6 HELIX 66 66 GLY D 183 GLY D 195 1 13 HELIX 67 67 ASP D 228 VAL D 232 5 5 HELIX 68 68 PRO D 233 ARG D 238 1 6 HELIX 69 69 LEU D 263 ALA D 273 1 11 HELIX 70 70 GLY D 278 LEU D 295 1 18 HELIX 71 71 SER D 301 ARG D 305 5 5 SHEET 1 A 7 GLU A 49 PHE A 51 0 SHEET 2 A 7 VAL A 27 LEU A 32 1 N VAL A 29 O GLU A 49 SHEET 3 A 7 ARG A 3 THR A 7 1 N PHE A 4 O VAL A 29 SHEET 4 A 7 TYR A 73 ILE A 76 1 O SER A 75 N ALA A 5 SHEET 5 A 7 ASN A 96 SER A 99 1 O LEU A 98 N LEU A 74 SHEET 6 A 7 VAL A 124 THR A 126 1 O TYR A 125 N ALA A 97 SHEET 7 A 7 PHE A 277 GLY A 278 -1 O PHE A 277 N THR A 126 SHEET 1 B 6 ALA A 197 ARG A 205 0 SHEET 2 B 6 VAL A 209 LEU A 216 -1 O ALA A 211 N HIS A 203 SHEET 3 B 6 ALA A 219 SER A 226 -1 O ALA A 219 N LEU A 216 SHEET 4 B 6 LYS A 150 THR A 158 1 N LEU A 154 O ARG A 222 SHEET 5 B 6 THR A 243 VAL A 249 -1 O SER A 246 N THR A 155 SHEET 6 B 6 GLU A 252 GLU A 255 -1 O VAL A 254 N ILE A 247 SHEET 1 C 6 GLU B 49 PHE B 51 0 SHEET 2 C 6 VAL B 27 LEU B 32 1 N VAL B 29 O GLU B 49 SHEET 3 C 6 ARG B 3 THR B 7 1 N PHE B 4 O VAL B 29 SHEET 4 C 6 TYR B 73 ILE B 76 1 O SER B 75 N ALA B 5 SHEET 5 C 6 ASN B 96 SER B 99 1 O LEU B 98 N LEU B 74 SHEET 6 C 6 VAL B 124 THR B 126 1 O TYR B 125 N SER B 99 SHEET 1 D 6 ALA B 197 ARG B 205 0 SHEET 2 D 6 VAL B 209 LEU B 216 -1 O ALA B 211 N HIS B 203 SHEET 3 D 6 ALA B 219 SER B 226 -1 O ALA B 219 N LEU B 216 SHEET 4 D 6 LYS B 150 THR B 158 1 N VAL B 152 O ARG B 220 SHEET 5 D 6 THR B 243 VAL B 249 -1 O TYR B 244 N VAL B 157 SHEET 6 D 6 GLU B 252 GLU B 255 -1 O VAL B 254 N ILE B 247 SHEET 1 E 7 GLU C 49 PHE C 51 0 SHEET 2 E 7 VAL C 27 LEU C 32 1 N VAL C 29 O GLU C 49 SHEET 3 E 7 ARG C 3 THR C 7 1 N PHE C 4 O VAL C 29 SHEET 4 E 7 TYR C 73 ILE C 76 1 O SER C 75 N ALA C 5 SHEET 5 E 7 ASN C 96 SER C 99 1 O LEU C 98 N LEU C 74 SHEET 6 E 7 VAL C 124 THR C 126 1 O TYR C 125 N SER C 99 SHEET 7 E 7 PHE C 277 GLY C 278 -1 O PHE C 277 N THR C 126 SHEET 1 F 6 ALA C 197 ARG C 205 0 SHEET 2 F 6 VAL C 209 LEU C 216 -1 O ALA C 211 N HIS C 203 SHEET 3 F 6 ALA C 219 SER C 226 -1 O ALA C 219 N LEU C 216 SHEET 4 F 6 LYS C 150 THR C 158 1 N LEU C 154 O ARG C 222 SHEET 5 F 6 THR C 243 VAL C 249 -1 O SER C 246 N THR C 155 SHEET 6 F 6 GLU C 252 GLU C 255 -1 O VAL C 254 N ILE C 247 SHEET 1 G 6 GLU D 49 PHE D 51 0 SHEET 2 G 6 VAL D 27 LEU D 32 1 N VAL D 29 O GLU D 49 SHEET 3 G 6 ARG D 3 THR D 7 1 N PHE D 4 O VAL D 29 SHEET 4 G 6 TYR D 73 ILE D 76 1 O SER D 75 N ALA D 5 SHEET 5 G 6 ASN D 96 SER D 99 1 O LEU D 98 N LEU D 74 SHEET 6 G 6 VAL D 124 THR D 126 1 O TYR D 125 N SER D 99 SHEET 1 H 6 ALA D 197 ARG D 205 0 SHEET 2 H 6 VAL D 209 LEU D 216 -1 O TYR D 213 N GLU D 201 SHEET 3 H 6 ALA D 219 SER D 226 -1 O ALA D 219 N LEU D 216 SHEET 4 H 6 LYS D 150 THR D 158 1 N VAL D 152 O ARG D 220 SHEET 5 H 6 THR D 243 VAL D 249 -1 O TYR D 244 N VAL D 157 SHEET 6 H 6 GLU D 252 GLU D 255 -1 O GLU D 252 N VAL D 249 CISPEP 1 LYS A 101 PRO A 102 0 -16.74 CISPEP 2 LYS B 101 PRO B 102 0 -17.80 CISPEP 3 LYS C 101 PRO C 102 0 -18.84 CISPEP 4 LYS D 101 PRO D 102 0 -19.34 SITE 1 AC1 36 GLY A 8 ALA A 10 GLY A 11 TYR A 12 SITE 2 AC1 36 ILE A 13 LEU A 32 ASP A 33 PRO A 34 SITE 3 AC1 36 ALA A 77 SER A 78 PRO A 79 ASN A 80 SITE 4 AC1 36 LEU A 82 HIS A 83 GLN A 86 GLU A 100 SITE 5 AC1 36 LYS A 101 GLN A 129 TRP A 168 LYS A 169 SITE 6 AC1 36 ASN A 181 HIS A 185 HIS A 264 AKG A 312 SITE 7 AC1 36 HOH A 323 HOH A 325 HOH A 327 HOH A 418 SITE 8 AC1 36 HOH A 585 HOH A1050 HOH A1081 ASN B 37 SITE 9 AC1 36 HOH B 319 GLU D 55 HOH D 320 HOH D 345 SITE 1 AC2 11 LYS A 101 TYR A 156 THR A 158 ARG A 160 SITE 2 AC2 11 ILE A 182 HIS A 185 ARG A 245 PHE A 260 SITE 3 AC2 11 NAD A 311 HOH A 332 HOH A 341 SITE 1 AC3 4 PHE A 51 THR A 52 GLU A 53 LYS B 166 SITE 1 AC4 36 ASN A 37 HOH A 382 GLY B 8 ALA B 10 SITE 2 AC4 36 GLY B 11 TYR B 12 ILE B 13 LEU B 32 SITE 3 AC4 36 ASP B 33 PRO B 34 ALA B 35 ALA B 77 SITE 4 AC4 36 SER B 78 PRO B 79 ASN B 80 LEU B 82 SITE 5 AC4 36 HIS B 83 GLN B 86 GLU B 100 LYS B 101 SITE 6 AC4 36 GLN B 129 TRP B 168 LYS B 169 ASN B 181 SITE 7 AC4 36 HIS B 185 HIS B 264 AKG B 312 HOH B 316 SITE 8 AC4 36 HOH B 324 HOH B 325 HOH B 366 HOH B 438 SITE 9 AC4 36 HOH B1051 GLU C 55 HOH C 322 HOH C 340 SITE 1 AC5 11 LYS B 101 TYR B 156 THR B 158 ARG B 160 SITE 2 AC5 11 HIS B 185 ARG B 245 PHE B 260 NAD B 311 SITE 3 AC5 11 HOH B 346 HOH B 352 HOH B1086 SITE 1 AC6 6 THR B 158 GLY B 159 ARG B 160 ARG B 242 SITE 2 AC6 6 HOH B 440 HOH B1217 SITE 1 AC7 7 LYS A 166 HOH A 334 HOH A 365 THR B 52 SITE 2 AC7 7 HOH B1093 HOH B1148 ALA C 173 SITE 1 AC8 4 LYS A 166 PHE B 51 THR B 52 GLU B 53 SITE 1 AC9 36 GLU B 55 HOH B 327 HOH B 400 GLY C 8 SITE 2 AC9 36 ALA C 10 GLY C 11 TYR C 12 ILE C 13 SITE 3 AC9 36 LEU C 32 ASP C 33 PRO C 34 ALA C 77 SITE 4 AC9 36 SER C 78 PRO C 79 ASN C 80 LEU C 82 SITE 5 AC9 36 HIS C 83 GLN C 86 GLU C 100 LYS C 101 SITE 6 AC9 36 GLN C 129 TRP C 168 LYS C 169 ASN C 181 SITE 7 AC9 36 HIS C 185 HIS C 264 AKG C 312 HOH C 327 SITE 8 AC9 36 HOH C 350 HOH C 398 HOH C 634 HOH C 687 SITE 9 AC9 36 HOH C 809 HOH C1088 ASN D 37 HOH D 358 SITE 1 BC1 13 LYS C 101 TYR C 156 THR C 158 ARG C 160 SITE 2 BC1 13 ASN C 181 ILE C 182 HIS C 185 ARG C 245 SITE 3 BC1 13 PHE C 260 NAD C 311 HOH C 316 HOH C 393 SITE 4 BC1 13 HOH C 703 SITE 1 BC2 4 HIS B 81 THR C 52 HOH C 698 LYS D 166 SITE 1 BC3 4 PHE C 51 THR C 52 GLU C 53 LYS D 166 SITE 1 BC4 34 GLU A 55 HOH A 483 ASN C 37 GLY D 8 SITE 2 BC4 34 ALA D 10 GLY D 11 TYR D 12 ILE D 13 SITE 3 BC4 34 LEU D 32 ASP D 33 PRO D 34 ALA D 35 SITE 4 BC4 34 ALA D 77 SER D 78 PRO D 79 ASN D 80 SITE 5 BC4 34 LEU D 82 HIS D 83 GLN D 86 GLU D 100 SITE 6 BC4 34 LYS D 101 GLN D 129 TRP D 168 LYS D 169 SITE 7 BC4 34 ASN D 181 PHE D 260 AKG D 312 HOH D 332 SITE 8 BC4 34 HOH D 356 HOH D 374 HOH D 563 HOH D 670 SITE 9 BC4 34 HOH D 707 HOH D 737 SITE 1 BC5 10 LYS D 101 TYR D 156 THR D 158 ARG D 160 SITE 2 BC5 10 ASN D 181 HIS D 185 ARG D 245 PHE D 260 SITE 3 BC5 10 NAD D 311 HOH D 335 SITE 1 BC6 4 LYS C 166 PHE D 51 THR D 52 GLU D 53 CRYST1 71.781 68.199 164.053 90.00 94.66 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013931 0.000000 0.001135 0.00000 SCALE2 0.000000 0.014663 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006116 0.00000