data_3OC8 # _entry.id 3OC8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3OC8 pdb_00003oc8 10.2210/pdb3oc8/pdb RCSB RCSB060932 ? ? WWPDB D_1000060932 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3OC5 _pdbx_database_related.details 'Crystal Structure Analysis of TcpF' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3OC8 _pdbx_database_status.recvd_initial_deposition_date 2010-08-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Craig, L.' 1 'Kolappan, S.' 2 'Yuen, A.S.W.' 3 # _citation.id primary _citation.title 'Crystal Structure of the Vibrio cholerae Colonization Factor TcpF and Identification of a Functional Immunogenic Site.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 409 _citation.page_first 146 _citation.page_last 158 _citation.year 2011 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21440558 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2011.03.027 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Megli, C.J.' 1 ? primary 'Yuen, A.S.' 2 ? primary 'Kolappan, S.' 3 ? primary 'Richardson, M.R.' 4 ? primary 'Dharmasena, M.N.' 5 ? primary 'Krebs, S.J.' 6 ? primary 'Taylor, R.K.' 7 ? primary 'Craig, L.' 8 ? # _cell.entry_id 3OC8 _cell.length_a 64.220 _cell.length_b 80.300 _cell.length_c 56.090 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3OC8 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Toxin coregulated pilus biosynthesis protein F' 15509.472 1 ? ? 'UNP residues 206-338' ? 2 non-polymer syn '1,4-DIETHYLENE DIOXIDE' 88.105 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 5 water nat water 18.015 108 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TCP pilus biosynthesis protein tcpF' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSKHGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSN NLTGKKLYNVSTNDMHNGYKWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSKHGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSN NLTGKKLYNVSTNDMHNGYKWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 ILE n 1 7 TYR n 1 8 PRO n 1 9 HIS n 1 10 ILE n 1 11 LYS n 1 12 VAL n 1 13 TYR n 1 14 GLU n 1 15 GLY n 1 16 THR n 1 17 LEU n 1 18 SER n 1 19 ARG n 1 20 LEU n 1 21 LYS n 1 22 PRO n 1 23 GLY n 1 24 GLY n 1 25 ALA n 1 26 MET n 1 27 ILE n 1 28 ALA n 1 29 VAL n 1 30 LEU n 1 31 GLU n 1 32 TYR n 1 33 ASP n 1 34 VAL n 1 35 ASN n 1 36 GLU n 1 37 LEU n 1 38 SER n 1 39 LYS n 1 40 HIS n 1 41 GLY n 1 42 TYR n 1 43 THR n 1 44 ASN n 1 45 LEU n 1 46 TRP n 1 47 ASP n 1 48 VAL n 1 49 GLN n 1 50 PHE n 1 51 LYS n 1 52 VAL n 1 53 LEU n 1 54 VAL n 1 55 GLY n 1 56 VAL n 1 57 PRO n 1 58 HIS n 1 59 ALA n 1 60 GLU n 1 61 THR n 1 62 GLY n 1 63 VAL n 1 64 ILE n 1 65 TYR n 1 66 ASP n 1 67 PRO n 1 68 VAL n 1 69 TYR n 1 70 GLU n 1 71 GLU n 1 72 THR n 1 73 VAL n 1 74 LYS n 1 75 PRO n 1 76 TYR n 1 77 GLN n 1 78 PRO n 1 79 SER n 1 80 ASN n 1 81 ASN n 1 82 LEU n 1 83 THR n 1 84 GLY n 1 85 LYS n 1 86 LYS n 1 87 LEU n 1 88 TYR n 1 89 ASN n 1 90 VAL n 1 91 SER n 1 92 THR n 1 93 ASN n 1 94 ASP n 1 95 MET n 1 96 HIS n 1 97 ASN n 1 98 GLY n 1 99 TYR n 1 100 LYS n 1 101 TRP n 1 102 SER n 1 103 ASN n 1 104 THR n 1 105 MET n 1 106 PHE n 1 107 SER n 1 108 ASN n 1 109 SER n 1 110 ASN n 1 111 TYR n 1 112 LYS n 1 113 THR n 1 114 GLN n 1 115 ILE n 1 116 LEU n 1 117 LEU n 1 118 THR n 1 119 LYS n 1 120 GLY n 1 121 ASP n 1 122 GLY n 1 123 SER n 1 124 GLY n 1 125 VAL n 1 126 LYS n 1 127 LEU n 1 128 TYR n 1 129 SER n 1 130 LYS n 1 131 ALA n 1 132 TYR n 1 133 SER n 1 134 GLU n 1 135 ASN n 1 136 PHE n 1 137 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'tcpF, VC_0837' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 666 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TCPF_VIBCH _struct_ref.pdbx_db_accession P0C6Q5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSKHGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSNNLTG KKLYNVSTNDMHNGYKWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK ; _struct_ref.pdbx_align_begin 206 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3OC8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 137 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0C6Q5 _struct_ref_seq.db_align_beg 206 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 338 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 186 _struct_ref_seq.pdbx_auth_seq_align_end 318 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3OC8 GLY A 1 ? UNP P0C6Q5 ? ? 'expression tag' 182 1 1 3OC8 SER A 2 ? UNP P0C6Q5 ? ? 'expression tag' 183 2 1 3OC8 HIS A 3 ? UNP P0C6Q5 ? ? 'expression tag' 184 3 1 3OC8 MET A 4 ? UNP P0C6Q5 ? ? 'expression tag' 185 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DIO non-polymer . '1,4-DIETHYLENE DIOXIDE' ? 'C4 H8 O2' 88.105 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3OC8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_percent_sol 47.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.6 M Ammonium Sulfate, 0.1 M MES pH 6.5, 10% v/v Dioxane, VAPOR DIFFUSION, HANGING DROP, temperature 293K' # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'MARMOSAIC 325 mm CCD' 2009-08-08 ? 2 ? ? ? ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'SIDE SCATTERING BENT CUBE-ROOT I -BEAM SINGLE CRYSTAL' 'SINGLE WAVELENGTH' x-ray 2 1 ? 'ASYMMETRIC CUT 4.965 DEGS.' ? x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0722 _diffrn_radiation_wavelength.wt 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'SSRL BEAMLINE BL11-1' SSRL BL11-1 1.0722 ? 2 ? ? ? ? ? ? # _reflns.entry_id 3OC8 _reflns.observed_criterion_sigma_I 22.900 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 2.100 _reflns.number_obs 8452 _reflns.number_all ? _reflns.percent_possible_obs 96.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3OC8 _refine.ls_number_reflns_obs 8029 _refine.ls_number_reflns_all 8452 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.41 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.173 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.169 _refine.ls_R_factor_R_free 0.238 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 423 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.921 _refine.B_iso_mean 21.57 _refine.aniso_B[1][1] -0.62000 _refine.aniso_B[2][2] -0.48000 _refine.aniso_B[3][3] 1.10000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 3OC5 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.198 _refine.overall_SU_ML 0.126 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 10.480 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1,2 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1060 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 108 _refine_hist.number_atoms_total 1202 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 19.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.021 0.022 ? 1134 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 751 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.824 1.980 ? 1536 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.993 3.000 ? 1849 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.859 5.000 ? 137 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.828 25.600 ? 50 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.667 15.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 37.366 15.000 ? 1 'X-RAY DIFFRACTION' ? r_chiral_restr 0.111 0.200 ? 162 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 1247 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 213 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.869 1.500 ? 677 'X-RAY DIFFRACTION' ? r_mcbond_other 0.244 1.500 ? 276 'X-RAY DIFFRACTION' ? r_mcangle_it 1.567 2.000 ? 1099 'X-RAY DIFFRACTION' ? r_scbond_it 2.700 3.000 ? 457 'X-RAY DIFFRACTION' ? r_scangle_it 3.920 4.500 ? 437 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.15 _refine_ls_shell.number_reflns_R_work 447 _refine_ls_shell.R_factor_R_work 0.1690 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.2220 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 24 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3OC8 _struct.title 'Crystal Structure of the C-terminal Domain of the Vibrio cholerae soluble colonization factor TcpF' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OC8 _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'immunoglobulin-like fold, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 34 ? HIS A 40 ? VAL A 215 HIS A 221 1 ? 7 HELX_P HELX_P2 2 ASN A 93 ? ASN A 97 ? ASN A 274 ASN A 278 5 ? 5 HELX_P HELX_P3 3 TYR A 99 ? PHE A 106 ? TYR A 280 PHE A 287 1 ? 8 HELX_P HELX_P4 4 SER A 133 ? LYS A 137 ? SER A 314 LYS A 318 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 27 ? ASP A 33 ? ILE A 208 ASP A 214 A 2 LYS A 85 ? SER A 91 ? LYS A 266 SER A 272 B 1 TYR A 69 ? VAL A 73 ? TYR A 250 VAL A 254 B 2 VAL A 48 ? GLY A 55 ? VAL A 229 GLY A 236 B 3 LYS A 112 ? LYS A 119 ? LYS A 293 LYS A 300 B 4 LEU A 127 ? TYR A 128 ? LEU A 308 TYR A 309 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 28 ? N ALA A 209 O VAL A 90 ? O VAL A 271 B 1 2 O TYR A 69 ? O TYR A 250 N VAL A 54 ? N VAL A 235 B 2 3 N LYS A 51 ? N LYS A 232 O LEU A 116 ? O LEU A 297 B 3 4 N LEU A 117 ? N LEU A 298 O LEU A 127 ? O LEU A 308 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DIO 401 ? 4 'BINDING SITE FOR RESIDUE DIO A 401' AC2 Software A GOL 501 ? 4 'BINDING SITE FOR RESIDUE GOL A 501' AC3 Software A GOL 502 ? 4 'BINDING SITE FOR RESIDUE GOL A 502' AC4 Software A GOL 503 ? 6 'BINDING SITE FOR RESIDUE GOL A 503' AC5 Software A SO4 601 ? 4 'BINDING SITE FOR RESIDUE SO4 A 601' AC6 Software A SO4 602 ? 3 'BINDING SITE FOR RESIDUE SO4 A 602' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 TYR A 13 ? TYR A 194 . ? 1_555 ? 2 AC1 4 TYR A 13 ? TYR A 194 . ? 3_654 ? 3 AC1 4 LEU A 82 ? LEU A 263 . ? 1_555 ? 4 AC1 4 LEU A 87 ? LEU A 268 . ? 3_654 ? 5 AC2 4 GLU A 71 ? GLU A 252 . ? 1_555 ? 6 AC2 4 ASN A 93 ? ASN A 274 . ? 1_555 ? 7 AC2 4 ASN A 97 ? ASN A 278 . ? 1_555 ? 8 AC2 4 LYS A 100 ? LYS A 281 . ? 1_555 ? 9 AC3 4 HOH H . ? HOH A 50 . ? 6_554 ? 10 AC3 4 PRO A 57 ? PRO A 238 . ? 6_554 ? 11 AC3 4 TYR A 76 ? TYR A 257 . ? 1_555 ? 12 AC3 4 ASN A 89 ? ASN A 270 . ? 1_555 ? 13 AC4 6 HOH H . ? HOH A 54 . ? 3_654 ? 14 AC4 6 HOH H . ? HOH A 75 . ? 1_555 ? 15 AC4 6 ASN A 80 ? ASN A 261 . ? 3_654 ? 16 AC4 6 ASN A 81 ? ASN A 262 . ? 3_654 ? 17 AC4 6 LEU A 82 ? LEU A 263 . ? 1_555 ? 18 AC4 6 THR A 83 ? THR A 264 . ? 1_555 ? 19 AC5 4 HOH H . ? HOH A 73 . ? 1_555 ? 20 AC5 4 THR A 43 ? THR A 224 . ? 1_555 ? 21 AC5 4 ASN A 44 ? ASN A 225 . ? 1_555 ? 22 AC5 4 LEU A 45 ? LEU A 226 . ? 1_555 ? 23 AC6 3 SER A 107 ? SER A 288 . ? 1_555 ? 24 AC6 3 ASN A 108 ? ASN A 289 . ? 1_555 ? 25 AC6 3 TYR A 111 ? TYR A 292 . ? 1_555 ? # _database_PDB_matrix.entry_id 3OC8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3OC8 _atom_sites.fract_transf_matrix[1][1] 0.015571 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012453 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017828 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 182 ? ? ? A . n A 1 2 SER 2 183 ? ? ? A . n A 1 3 HIS 3 184 ? ? ? A . n A 1 4 MET 4 185 185 MET MET A . n A 1 5 GLU 5 186 186 GLU GLU A . n A 1 6 ILE 6 187 187 ILE ILE A . n A 1 7 TYR 7 188 188 TYR TYR A . n A 1 8 PRO 8 189 189 PRO PRO A . n A 1 9 HIS 9 190 190 HIS HIS A . n A 1 10 ILE 10 191 191 ILE ILE A . n A 1 11 LYS 11 192 192 LYS LYS A . n A 1 12 VAL 12 193 193 VAL VAL A . n A 1 13 TYR 13 194 194 TYR TYR A . n A 1 14 GLU 14 195 195 GLU GLU A . n A 1 15 GLY 15 196 196 GLY GLY A . n A 1 16 THR 16 197 197 THR THR A . n A 1 17 LEU 17 198 198 LEU LEU A . n A 1 18 SER 18 199 199 SER SER A . n A 1 19 ARG 19 200 200 ARG ARG A . n A 1 20 LEU 20 201 201 LEU LEU A . n A 1 21 LYS 21 202 202 LYS LYS A . n A 1 22 PRO 22 203 203 PRO PRO A . n A 1 23 GLY 23 204 204 GLY GLY A . n A 1 24 GLY 24 205 205 GLY GLY A . n A 1 25 ALA 25 206 206 ALA ALA A . n A 1 26 MET 26 207 207 MET MET A . n A 1 27 ILE 27 208 208 ILE ILE A . n A 1 28 ALA 28 209 209 ALA ALA A . n A 1 29 VAL 29 210 210 VAL VAL A . n A 1 30 LEU 30 211 211 LEU LEU A . n A 1 31 GLU 31 212 212 GLU GLU A . n A 1 32 TYR 32 213 213 TYR TYR A . n A 1 33 ASP 33 214 214 ASP ASP A . n A 1 34 VAL 34 215 215 VAL VAL A . n A 1 35 ASN 35 216 216 ASN ASN A . n A 1 36 GLU 36 217 217 GLU GLU A . n A 1 37 LEU 37 218 218 LEU LEU A . n A 1 38 SER 38 219 219 SER SER A . n A 1 39 LYS 39 220 220 LYS LYS A . n A 1 40 HIS 40 221 221 HIS HIS A . n A 1 41 GLY 41 222 222 GLY GLY A . n A 1 42 TYR 42 223 223 TYR TYR A . n A 1 43 THR 43 224 224 THR THR A . n A 1 44 ASN 44 225 225 ASN ASN A . n A 1 45 LEU 45 226 226 LEU LEU A . n A 1 46 TRP 46 227 227 TRP TRP A . n A 1 47 ASP 47 228 228 ASP ASP A . n A 1 48 VAL 48 229 229 VAL VAL A . n A 1 49 GLN 49 230 230 GLN GLN A . n A 1 50 PHE 50 231 231 PHE PHE A . n A 1 51 LYS 51 232 232 LYS LYS A . n A 1 52 VAL 52 233 233 VAL VAL A . n A 1 53 LEU 53 234 234 LEU LEU A . n A 1 54 VAL 54 235 235 VAL VAL A . n A 1 55 GLY 55 236 236 GLY GLY A . n A 1 56 VAL 56 237 237 VAL VAL A . n A 1 57 PRO 57 238 238 PRO PRO A . n A 1 58 HIS 58 239 239 HIS HIS A . n A 1 59 ALA 59 240 240 ALA ALA A . n A 1 60 GLU 60 241 241 GLU GLU A . n A 1 61 THR 61 242 242 THR THR A . n A 1 62 GLY 62 243 243 GLY GLY A . n A 1 63 VAL 63 244 244 VAL VAL A . n A 1 64 ILE 64 245 245 ILE ILE A . n A 1 65 TYR 65 246 246 TYR TYR A . n A 1 66 ASP 66 247 247 ASP ASP A . n A 1 67 PRO 67 248 248 PRO PRO A . n A 1 68 VAL 68 249 249 VAL VAL A . n A 1 69 TYR 69 250 250 TYR TYR A . n A 1 70 GLU 70 251 251 GLU GLU A . n A 1 71 GLU 71 252 252 GLU GLU A . n A 1 72 THR 72 253 253 THR THR A . n A 1 73 VAL 73 254 254 VAL VAL A . n A 1 74 LYS 74 255 255 LYS LYS A . n A 1 75 PRO 75 256 256 PRO PRO A . n A 1 76 TYR 76 257 257 TYR TYR A . n A 1 77 GLN 77 258 258 GLN GLN A . n A 1 78 PRO 78 259 259 PRO PRO A . n A 1 79 SER 79 260 260 SER SER A . n A 1 80 ASN 80 261 261 ASN ASN A . n A 1 81 ASN 81 262 262 ASN ASN A . n A 1 82 LEU 82 263 263 LEU LEU A . n A 1 83 THR 83 264 264 THR THR A . n A 1 84 GLY 84 265 265 GLY GLY A . n A 1 85 LYS 85 266 266 LYS LYS A . n A 1 86 LYS 86 267 267 LYS LYS A . n A 1 87 LEU 87 268 268 LEU LEU A . n A 1 88 TYR 88 269 269 TYR TYR A . n A 1 89 ASN 89 270 270 ASN ASN A . n A 1 90 VAL 90 271 271 VAL VAL A . n A 1 91 SER 91 272 272 SER SER A . n A 1 92 THR 92 273 273 THR THR A . n A 1 93 ASN 93 274 274 ASN ASN A . n A 1 94 ASP 94 275 275 ASP ASP A . n A 1 95 MET 95 276 276 MET MET A . n A 1 96 HIS 96 277 277 HIS HIS A . n A 1 97 ASN 97 278 278 ASN ASN A . n A 1 98 GLY 98 279 279 GLY GLY A . n A 1 99 TYR 99 280 280 TYR TYR A . n A 1 100 LYS 100 281 281 LYS LYS A . n A 1 101 TRP 101 282 282 TRP TRP A . n A 1 102 SER 102 283 283 SER SER A . n A 1 103 ASN 103 284 284 ASN ASN A . n A 1 104 THR 104 285 285 THR THR A . n A 1 105 MET 105 286 286 MET MET A . n A 1 106 PHE 106 287 287 PHE PHE A . n A 1 107 SER 107 288 288 SER SER A . n A 1 108 ASN 108 289 289 ASN ASN A . n A 1 109 SER 109 290 290 SER SER A . n A 1 110 ASN 110 291 291 ASN ASN A . n A 1 111 TYR 111 292 292 TYR TYR A . n A 1 112 LYS 112 293 293 LYS LYS A . n A 1 113 THR 113 294 294 THR THR A . n A 1 114 GLN 114 295 295 GLN GLN A . n A 1 115 ILE 115 296 296 ILE ILE A . n A 1 116 LEU 116 297 297 LEU LEU A . n A 1 117 LEU 117 298 298 LEU LEU A . n A 1 118 THR 118 299 299 THR THR A . n A 1 119 LYS 119 300 300 LYS LYS A . n A 1 120 GLY 120 301 301 GLY GLY A . n A 1 121 ASP 121 302 302 ASP ASP A . n A 1 122 GLY 122 303 303 GLY GLY A . n A 1 123 SER 123 304 304 SER SER A . n A 1 124 GLY 124 305 305 GLY GLY A . n A 1 125 VAL 125 306 306 VAL VAL A . n A 1 126 LYS 126 307 307 LYS LYS A . n A 1 127 LEU 127 308 308 LEU LEU A . n A 1 128 TYR 128 309 309 TYR TYR A . n A 1 129 SER 129 310 310 SER SER A . n A 1 130 LYS 130 311 311 LYS LYS A . n A 1 131 ALA 131 312 312 ALA ALA A . n A 1 132 TYR 132 313 313 TYR TYR A . n A 1 133 SER 133 314 314 SER SER A . n A 1 134 GLU 134 315 315 GLU GLU A . n A 1 135 ASN 135 316 316 ASN ASN A . n A 1 136 PHE 136 317 317 PHE PHE A . n A 1 137 LYS 137 318 318 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DIO 1 401 401 DIO DIO A . C 3 GOL 1 501 501 GOL GOL A . D 3 GOL 1 502 502 GOL GOL A . E 3 GOL 1 503 503 GOL GOL A . F 4 SO4 1 601 601 SO4 SO4 A . G 4 SO4 1 602 602 SO4 SO4 A . H 5 HOH 1 1 1 HOH HOH A . H 5 HOH 2 2 2 HOH HOH A . H 5 HOH 3 3 3 HOH HOH A . H 5 HOH 4 4 4 HOH HOH A . H 5 HOH 5 5 5 HOH HOH A . H 5 HOH 6 6 6 HOH HOH A . H 5 HOH 7 7 7 HOH HOH A . H 5 HOH 8 8 8 HOH HOH A . H 5 HOH 9 9 9 HOH HOH A . H 5 HOH 10 10 10 HOH HOH A . H 5 HOH 11 11 11 HOH HOH A . H 5 HOH 12 12 12 HOH HOH A . H 5 HOH 13 13 13 HOH HOH A . H 5 HOH 14 14 14 HOH HOH A . H 5 HOH 15 15 15 HOH HOH A . H 5 HOH 16 16 16 HOH HOH A . H 5 HOH 17 17 17 HOH HOH A . H 5 HOH 18 18 18 HOH HOH A . H 5 HOH 19 19 19 HOH HOH A . H 5 HOH 20 20 20 HOH HOH A . H 5 HOH 21 21 21 HOH HOH A . H 5 HOH 22 22 22 HOH HOH A . H 5 HOH 23 23 23 HOH HOH A . H 5 HOH 24 24 24 HOH HOH A . H 5 HOH 25 25 25 HOH HOH A . H 5 HOH 26 26 26 HOH HOH A . H 5 HOH 27 27 27 HOH HOH A . H 5 HOH 28 28 28 HOH HOH A . H 5 HOH 29 29 29 HOH HOH A . H 5 HOH 30 30 30 HOH HOH A . H 5 HOH 31 31 31 HOH HOH A . H 5 HOH 32 32 32 HOH HOH A . H 5 HOH 33 33 33 HOH HOH A . H 5 HOH 34 34 34 HOH HOH A . H 5 HOH 35 35 35 HOH HOH A . H 5 HOH 36 36 36 HOH HOH A . H 5 HOH 37 37 37 HOH HOH A . H 5 HOH 38 38 38 HOH HOH A . H 5 HOH 39 39 39 HOH HOH A . H 5 HOH 40 40 40 HOH HOH A . H 5 HOH 41 41 41 HOH HOH A . H 5 HOH 42 42 42 HOH HOH A . H 5 HOH 43 43 43 HOH HOH A . H 5 HOH 44 44 44 HOH HOH A . H 5 HOH 45 45 45 HOH HOH A . H 5 HOH 46 46 46 HOH HOH A . H 5 HOH 47 47 47 HOH HOH A . H 5 HOH 48 48 48 HOH HOH A . H 5 HOH 49 49 49 HOH HOH A . H 5 HOH 50 50 50 HOH HOH A . H 5 HOH 51 51 51 HOH HOH A . H 5 HOH 52 52 52 HOH HOH A . H 5 HOH 53 53 53 HOH HOH A . H 5 HOH 54 54 54 HOH HOH A . H 5 HOH 55 55 55 HOH HOH A . H 5 HOH 56 56 56 HOH HOH A . H 5 HOH 57 57 57 HOH HOH A . H 5 HOH 58 58 58 HOH HOH A . H 5 HOH 59 59 59 HOH HOH A . H 5 HOH 60 60 60 HOH HOH A . H 5 HOH 61 61 61 HOH HOH A . H 5 HOH 62 62 62 HOH HOH A . H 5 HOH 63 63 63 HOH HOH A . H 5 HOH 64 64 64 HOH HOH A . H 5 HOH 65 65 65 HOH HOH A . H 5 HOH 66 66 66 HOH HOH A . H 5 HOH 67 67 67 HOH HOH A . H 5 HOH 68 68 68 HOH HOH A . H 5 HOH 69 69 69 HOH HOH A . H 5 HOH 70 70 70 HOH HOH A . H 5 HOH 71 71 71 HOH HOH A . H 5 HOH 72 72 72 HOH HOH A . H 5 HOH 73 73 73 HOH HOH A . H 5 HOH 74 74 74 HOH HOH A . H 5 HOH 75 75 75 HOH HOH A . H 5 HOH 76 76 76 HOH HOH A . H 5 HOH 77 77 77 HOH HOH A . H 5 HOH 78 78 78 HOH HOH A . H 5 HOH 79 79 79 HOH HOH A . H 5 HOH 80 80 80 HOH HOH A . H 5 HOH 81 81 81 HOH HOH A . H 5 HOH 82 82 82 HOH HOH A . H 5 HOH 83 83 83 HOH HOH A . H 5 HOH 84 84 84 HOH HOH A . H 5 HOH 85 85 85 HOH HOH A . H 5 HOH 86 86 86 HOH HOH A . H 5 HOH 87 87 87 HOH HOH A . H 5 HOH 88 88 88 HOH HOH A . H 5 HOH 89 89 89 HOH HOH A . H 5 HOH 90 90 90 HOH HOH A . H 5 HOH 91 91 91 HOH HOH A . H 5 HOH 92 92 92 HOH HOH A . H 5 HOH 93 93 93 HOH HOH A . H 5 HOH 94 94 94 HOH HOH A . H 5 HOH 95 95 95 HOH HOH A . H 5 HOH 96 96 96 HOH HOH A . H 5 HOH 97 97 97 HOH HOH A . H 5 HOH 98 98 98 HOH HOH A . H 5 HOH 99 99 99 HOH HOH A . H 5 HOH 100 100 100 HOH HOH A . H 5 HOH 101 101 101 HOH HOH A . H 5 HOH 102 102 102 HOH HOH A . H 5 HOH 103 103 103 HOH HOH A . H 5 HOH 104 104 104 HOH HOH A . H 5 HOH 105 105 105 HOH HOH A . H 5 HOH 106 106 106 HOH HOH A . H 5 HOH 107 107 107 HOH HOH A . H 5 HOH 108 108 108 HOH HOH A . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H 2 1,2 A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 3470 ? 2 MORE -23 ? 2 'SSA (A^2)' 13600 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_654 -x+1,y,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 64.2200000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -28.0450000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 18.0308 _pdbx_refine_tls.origin_y 15.1660 _pdbx_refine_tls.origin_z -11.8731 _pdbx_refine_tls.T[1][1] .0345 _pdbx_refine_tls.T[2][2] .0271 _pdbx_refine_tls.T[3][3] .0207 _pdbx_refine_tls.T[1][2] -.0111 _pdbx_refine_tls.T[1][3] -.0154 _pdbx_refine_tls.T[2][3] .0101 _pdbx_refine_tls.L[1][1] 1.8905 _pdbx_refine_tls.L[2][2] .8300 _pdbx_refine_tls.L[3][3] .2985 _pdbx_refine_tls.L[1][2] -.7674 _pdbx_refine_tls.L[1][3] -.2478 _pdbx_refine_tls.L[2][3] .2676 _pdbx_refine_tls.S[1][1] .0563 _pdbx_refine_tls.S[1][2] .0630 _pdbx_refine_tls.S[1][3] -.1308 _pdbx_refine_tls.S[2][1] -.0540 _pdbx_refine_tls.S[2][2] -.0394 _pdbx_refine_tls.S[2][3] .0865 _pdbx_refine_tls.S[3][1] .0397 _pdbx_refine_tls.S[3][2] -.0824 _pdbx_refine_tls.S[3][3] -.0169 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 185 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 318 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0072 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 185 ? CG ? A MET 4 CG 2 1 Y 1 A MET 185 ? SD ? A MET 4 SD 3 1 Y 1 A MET 185 ? CE ? A MET 4 CE 4 1 Y 1 A TRP 227 ? CD1 ? A TRP 46 CD1 5 1 Y 1 A TRP 227 ? CD2 ? A TRP 46 CD2 6 1 Y 1 A TRP 227 ? NE1 ? A TRP 46 NE1 7 1 Y 1 A TRP 227 ? CE2 ? A TRP 46 CE2 8 1 Y 1 A TRP 227 ? CE3 ? A TRP 46 CE3 9 1 Y 1 A TRP 227 ? CZ2 ? A TRP 46 CZ2 10 1 Y 1 A TRP 227 ? CZ3 ? A TRP 46 CZ3 11 1 Y 1 A TRP 227 ? CH2 ? A TRP 46 CH2 12 1 Y 1 A LYS 318 ? CD ? A LYS 137 CD 13 1 Y 1 A LYS 318 ? CE ? A LYS 137 CE 14 1 Y 1 A LYS 318 ? NZ ? A LYS 137 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 182 ? A GLY 1 2 1 Y 1 A SER 183 ? A SER 2 3 1 Y 1 A HIS 184 ? A HIS 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DIO C1 C N N 74 DIO C2 C N N 75 DIO "C1'" C N N 76 DIO "C2'" C N N 77 DIO O1 O N N 78 DIO "O1'" O N N 79 DIO H11 H N N 80 DIO H12 H N N 81 DIO H21 H N N 82 DIO H22 H N N 83 DIO "H1'1" H N N 84 DIO "H1'2" H N N 85 DIO "H2'1" H N N 86 DIO "H2'2" H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 SO4 S S N N 318 SO4 O1 O N N 319 SO4 O2 O N N 320 SO4 O3 O N N 321 SO4 O4 O N N 322 THR N N N N 323 THR CA C N S 324 THR C C N N 325 THR O O N N 326 THR CB C N R 327 THR OG1 O N N 328 THR CG2 C N N 329 THR OXT O N N 330 THR H H N N 331 THR H2 H N N 332 THR HA H N N 333 THR HB H N N 334 THR HG1 H N N 335 THR HG21 H N N 336 THR HG22 H N N 337 THR HG23 H N N 338 THR HXT H N N 339 TRP N N N N 340 TRP CA C N S 341 TRP C C N N 342 TRP O O N N 343 TRP CB C N N 344 TRP CG C Y N 345 TRP CD1 C Y N 346 TRP CD2 C Y N 347 TRP NE1 N Y N 348 TRP CE2 C Y N 349 TRP CE3 C Y N 350 TRP CZ2 C Y N 351 TRP CZ3 C Y N 352 TRP CH2 C Y N 353 TRP OXT O N N 354 TRP H H N N 355 TRP H2 H N N 356 TRP HA H N N 357 TRP HB2 H N N 358 TRP HB3 H N N 359 TRP HD1 H N N 360 TRP HE1 H N N 361 TRP HE3 H N N 362 TRP HZ2 H N N 363 TRP HZ3 H N N 364 TRP HH2 H N N 365 TRP HXT H N N 366 TYR N N N N 367 TYR CA C N S 368 TYR C C N N 369 TYR O O N N 370 TYR CB C N N 371 TYR CG C Y N 372 TYR CD1 C Y N 373 TYR CD2 C Y N 374 TYR CE1 C Y N 375 TYR CE2 C Y N 376 TYR CZ C Y N 377 TYR OH O N N 378 TYR OXT O N N 379 TYR H H N N 380 TYR H2 H N N 381 TYR HA H N N 382 TYR HB2 H N N 383 TYR HB3 H N N 384 TYR HD1 H N N 385 TYR HD2 H N N 386 TYR HE1 H N N 387 TYR HE2 H N N 388 TYR HH H N N 389 TYR HXT H N N 390 VAL N N N N 391 VAL CA C N S 392 VAL C C N N 393 VAL O O N N 394 VAL CB C N N 395 VAL CG1 C N N 396 VAL CG2 C N N 397 VAL OXT O N N 398 VAL H H N N 399 VAL H2 H N N 400 VAL HA H N N 401 VAL HB H N N 402 VAL HG11 H N N 403 VAL HG12 H N N 404 VAL HG13 H N N 405 VAL HG21 H N N 406 VAL HG22 H N N 407 VAL HG23 H N N 408 VAL HXT H N N 409 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DIO C1 "C1'" sing N N 70 DIO C1 O1 sing N N 71 DIO C1 H11 sing N N 72 DIO C1 H12 sing N N 73 DIO C2 "C2'" sing N N 74 DIO C2 O1 sing N N 75 DIO C2 H21 sing N N 76 DIO C2 H22 sing N N 77 DIO "C1'" "O1'" sing N N 78 DIO "C1'" "H1'1" sing N N 79 DIO "C1'" "H1'2" sing N N 80 DIO "C2'" "O1'" sing N N 81 DIO "C2'" "H2'1" sing N N 82 DIO "C2'" "H2'2" sing N N 83 GLN N CA sing N N 84 GLN N H sing N N 85 GLN N H2 sing N N 86 GLN CA C sing N N 87 GLN CA CB sing N N 88 GLN CA HA sing N N 89 GLN C O doub N N 90 GLN C OXT sing N N 91 GLN CB CG sing N N 92 GLN CB HB2 sing N N 93 GLN CB HB3 sing N N 94 GLN CG CD sing N N 95 GLN CG HG2 sing N N 96 GLN CG HG3 sing N N 97 GLN CD OE1 doub N N 98 GLN CD NE2 sing N N 99 GLN NE2 HE21 sing N N 100 GLN NE2 HE22 sing N N 101 GLN OXT HXT sing N N 102 GLU N CA sing N N 103 GLU N H sing N N 104 GLU N H2 sing N N 105 GLU CA C sing N N 106 GLU CA CB sing N N 107 GLU CA HA sing N N 108 GLU C O doub N N 109 GLU C OXT sing N N 110 GLU CB CG sing N N 111 GLU CB HB2 sing N N 112 GLU CB HB3 sing N N 113 GLU CG CD sing N N 114 GLU CG HG2 sing N N 115 GLU CG HG3 sing N N 116 GLU CD OE1 doub N N 117 GLU CD OE2 sing N N 118 GLU OE2 HE2 sing N N 119 GLU OXT HXT sing N N 120 GLY N CA sing N N 121 GLY N H sing N N 122 GLY N H2 sing N N 123 GLY CA C sing N N 124 GLY CA HA2 sing N N 125 GLY CA HA3 sing N N 126 GLY C O doub N N 127 GLY C OXT sing N N 128 GLY OXT HXT sing N N 129 GOL C1 O1 sing N N 130 GOL C1 C2 sing N N 131 GOL C1 H11 sing N N 132 GOL C1 H12 sing N N 133 GOL O1 HO1 sing N N 134 GOL C2 O2 sing N N 135 GOL C2 C3 sing N N 136 GOL C2 H2 sing N N 137 GOL O2 HO2 sing N N 138 GOL C3 O3 sing N N 139 GOL C3 H31 sing N N 140 GOL C3 H32 sing N N 141 GOL O3 HO3 sing N N 142 HIS N CA sing N N 143 HIS N H sing N N 144 HIS N H2 sing N N 145 HIS CA C sing N N 146 HIS CA CB sing N N 147 HIS CA HA sing N N 148 HIS C O doub N N 149 HIS C OXT sing N N 150 HIS CB CG sing N N 151 HIS CB HB2 sing N N 152 HIS CB HB3 sing N N 153 HIS CG ND1 sing Y N 154 HIS CG CD2 doub Y N 155 HIS ND1 CE1 doub Y N 156 HIS ND1 HD1 sing N N 157 HIS CD2 NE2 sing Y N 158 HIS CD2 HD2 sing N N 159 HIS CE1 NE2 sing Y N 160 HIS CE1 HE1 sing N N 161 HIS NE2 HE2 sing N N 162 HIS OXT HXT sing N N 163 HOH O H1 sing N N 164 HOH O H2 sing N N 165 ILE N CA sing N N 166 ILE N H sing N N 167 ILE N H2 sing N N 168 ILE CA C sing N N 169 ILE CA CB sing N N 170 ILE CA HA sing N N 171 ILE C O doub N N 172 ILE C OXT sing N N 173 ILE CB CG1 sing N N 174 ILE CB CG2 sing N N 175 ILE CB HB sing N N 176 ILE CG1 CD1 sing N N 177 ILE CG1 HG12 sing N N 178 ILE CG1 HG13 sing N N 179 ILE CG2 HG21 sing N N 180 ILE CG2 HG22 sing N N 181 ILE CG2 HG23 sing N N 182 ILE CD1 HD11 sing N N 183 ILE CD1 HD12 sing N N 184 ILE CD1 HD13 sing N N 185 ILE OXT HXT sing N N 186 LEU N CA sing N N 187 LEU N H sing N N 188 LEU N H2 sing N N 189 LEU CA C sing N N 190 LEU CA CB sing N N 191 LEU CA HA sing N N 192 LEU C O doub N N 193 LEU C OXT sing N N 194 LEU CB CG sing N N 195 LEU CB HB2 sing N N 196 LEU CB HB3 sing N N 197 LEU CG CD1 sing N N 198 LEU CG CD2 sing N N 199 LEU CG HG sing N N 200 LEU CD1 HD11 sing N N 201 LEU CD1 HD12 sing N N 202 LEU CD1 HD13 sing N N 203 LEU CD2 HD21 sing N N 204 LEU CD2 HD22 sing N N 205 LEU CD2 HD23 sing N N 206 LEU OXT HXT sing N N 207 LYS N CA sing N N 208 LYS N H sing N N 209 LYS N H2 sing N N 210 LYS CA C sing N N 211 LYS CA CB sing N N 212 LYS CA HA sing N N 213 LYS C O doub N N 214 LYS C OXT sing N N 215 LYS CB CG sing N N 216 LYS CB HB2 sing N N 217 LYS CB HB3 sing N N 218 LYS CG CD sing N N 219 LYS CG HG2 sing N N 220 LYS CG HG3 sing N N 221 LYS CD CE sing N N 222 LYS CD HD2 sing N N 223 LYS CD HD3 sing N N 224 LYS CE NZ sing N N 225 LYS CE HE2 sing N N 226 LYS CE HE3 sing N N 227 LYS NZ HZ1 sing N N 228 LYS NZ HZ2 sing N N 229 LYS NZ HZ3 sing N N 230 LYS OXT HXT sing N N 231 MET N CA sing N N 232 MET N H sing N N 233 MET N H2 sing N N 234 MET CA C sing N N 235 MET CA CB sing N N 236 MET CA HA sing N N 237 MET C O doub N N 238 MET C OXT sing N N 239 MET CB CG sing N N 240 MET CB HB2 sing N N 241 MET CB HB3 sing N N 242 MET CG SD sing N N 243 MET CG HG2 sing N N 244 MET CG HG3 sing N N 245 MET SD CE sing N N 246 MET CE HE1 sing N N 247 MET CE HE2 sing N N 248 MET CE HE3 sing N N 249 MET OXT HXT sing N N 250 PHE N CA sing N N 251 PHE N H sing N N 252 PHE N H2 sing N N 253 PHE CA C sing N N 254 PHE CA CB sing N N 255 PHE CA HA sing N N 256 PHE C O doub N N 257 PHE C OXT sing N N 258 PHE CB CG sing N N 259 PHE CB HB2 sing N N 260 PHE CB HB3 sing N N 261 PHE CG CD1 doub Y N 262 PHE CG CD2 sing Y N 263 PHE CD1 CE1 sing Y N 264 PHE CD1 HD1 sing N N 265 PHE CD2 CE2 doub Y N 266 PHE CD2 HD2 sing N N 267 PHE CE1 CZ doub Y N 268 PHE CE1 HE1 sing N N 269 PHE CE2 CZ sing Y N 270 PHE CE2 HE2 sing N N 271 PHE CZ HZ sing N N 272 PHE OXT HXT sing N N 273 PRO N CA sing N N 274 PRO N CD sing N N 275 PRO N H sing N N 276 PRO CA C sing N N 277 PRO CA CB sing N N 278 PRO CA HA sing N N 279 PRO C O doub N N 280 PRO C OXT sing N N 281 PRO CB CG sing N N 282 PRO CB HB2 sing N N 283 PRO CB HB3 sing N N 284 PRO CG CD sing N N 285 PRO CG HG2 sing N N 286 PRO CG HG3 sing N N 287 PRO CD HD2 sing N N 288 PRO CD HD3 sing N N 289 PRO OXT HXT sing N N 290 SER N CA sing N N 291 SER N H sing N N 292 SER N H2 sing N N 293 SER CA C sing N N 294 SER CA CB sing N N 295 SER CA HA sing N N 296 SER C O doub N N 297 SER C OXT sing N N 298 SER CB OG sing N N 299 SER CB HB2 sing N N 300 SER CB HB3 sing N N 301 SER OG HG sing N N 302 SER OXT HXT sing N N 303 SO4 S O1 doub N N 304 SO4 S O2 doub N N 305 SO4 S O3 sing N N 306 SO4 S O4 sing N N 307 THR N CA sing N N 308 THR N H sing N N 309 THR N H2 sing N N 310 THR CA C sing N N 311 THR CA CB sing N N 312 THR CA HA sing N N 313 THR C O doub N N 314 THR C OXT sing N N 315 THR CB OG1 sing N N 316 THR CB CG2 sing N N 317 THR CB HB sing N N 318 THR OG1 HG1 sing N N 319 THR CG2 HG21 sing N N 320 THR CG2 HG22 sing N N 321 THR CG2 HG23 sing N N 322 THR OXT HXT sing N N 323 TRP N CA sing N N 324 TRP N H sing N N 325 TRP N H2 sing N N 326 TRP CA C sing N N 327 TRP CA CB sing N N 328 TRP CA HA sing N N 329 TRP C O doub N N 330 TRP C OXT sing N N 331 TRP CB CG sing N N 332 TRP CB HB2 sing N N 333 TRP CB HB3 sing N N 334 TRP CG CD1 doub Y N 335 TRP CG CD2 sing Y N 336 TRP CD1 NE1 sing Y N 337 TRP CD1 HD1 sing N N 338 TRP CD2 CE2 doub Y N 339 TRP CD2 CE3 sing Y N 340 TRP NE1 CE2 sing Y N 341 TRP NE1 HE1 sing N N 342 TRP CE2 CZ2 sing Y N 343 TRP CE3 CZ3 doub Y N 344 TRP CE3 HE3 sing N N 345 TRP CZ2 CH2 doub Y N 346 TRP CZ2 HZ2 sing N N 347 TRP CZ3 CH2 sing Y N 348 TRP CZ3 HZ3 sing N N 349 TRP CH2 HH2 sing N N 350 TRP OXT HXT sing N N 351 TYR N CA sing N N 352 TYR N H sing N N 353 TYR N H2 sing N N 354 TYR CA C sing N N 355 TYR CA CB sing N N 356 TYR CA HA sing N N 357 TYR C O doub N N 358 TYR C OXT sing N N 359 TYR CB CG sing N N 360 TYR CB HB2 sing N N 361 TYR CB HB3 sing N N 362 TYR CG CD1 doub Y N 363 TYR CG CD2 sing Y N 364 TYR CD1 CE1 sing Y N 365 TYR CD1 HD1 sing N N 366 TYR CD2 CE2 doub Y N 367 TYR CD2 HD2 sing N N 368 TYR CE1 CZ doub Y N 369 TYR CE1 HE1 sing N N 370 TYR CE2 CZ sing Y N 371 TYR CE2 HE2 sing N N 372 TYR CZ OH sing N N 373 TYR OH HH sing N N 374 TYR OXT HXT sing N N 375 VAL N CA sing N N 376 VAL N H sing N N 377 VAL N H2 sing N N 378 VAL CA C sing N N 379 VAL CA CB sing N N 380 VAL CA HA sing N N 381 VAL C O doub N N 382 VAL C OXT sing N N 383 VAL CB CG1 sing N N 384 VAL CB CG2 sing N N 385 VAL CB HB sing N N 386 VAL CG1 HG11 sing N N 387 VAL CG1 HG12 sing N N 388 VAL CG1 HG13 sing N N 389 VAL CG2 HG21 sing N N 390 VAL CG2 HG22 sing N N 391 VAL CG2 HG23 sing N N 392 VAL OXT HXT sing N N 393 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '1,4-DIETHYLENE DIOXIDE' DIO 3 GLYCEROL GOL 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3OC5 _pdbx_initial_refinement_model.details ? #