HEADER HYDROLASE 10-AUG-10 3OCU TITLE STRUCTURE OF RECOMBINANT HAEMOPHILUS INFLUENZAE E(P4) ACID PHOSPHATASE TITLE 2 MUTANT D66N COMPLEXED WITH NMN COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOPROTEIN E; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OUTER MEMBRANE PROTEIN P4, OMP P4; COMPND 5 EC: 3.1.3.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 GENE: HEL, HI_0693, OMPP4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET20B KEYWDS HYDROLASE, OUTER MEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR H.SINGH,J.SCHUERMANN,T.REILLY,M.CALCUTT,J.TANNER REVDAT 4 06-SEP-23 3OCU 1 REMARK SEQADV LINK REVDAT 3 08-NOV-17 3OCU 1 REMARK REVDAT 2 24-AUG-11 3OCU 1 JRNL VERSN REVDAT 1 20-OCT-10 3OCU 0 JRNL AUTH H.SINGH,J.P.SCHUERMANN,T.J.REILLY,M.J.CALCUTT,J.J.TANNER JRNL TITL RECOGNITION OF NUCLEOSIDE MONOPHOSPHATE SUBSTRATES BY JRNL TITL 2 HAEMOPHILUS INFLUENZAE CLASS C ACID PHOSPHATASE. JRNL REF J.MOL.BIOL. V. 404 639 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20934434 JRNL DOI 10.1016/J.JMB.2010.09.065 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.2_432 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 65943 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.136 REMARK 3 R VALUE (WORKING SET) : 0.135 REMARK 3 FREE R VALUE : 0.154 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 3379 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.0078 - 3.8920 0.98 2820 137 0.1597 0.1504 REMARK 3 2 3.8920 - 3.0900 0.99 2672 163 0.1508 0.1670 REMARK 3 3 3.0900 - 2.6996 0.99 2686 131 0.1583 0.1551 REMARK 3 4 2.6996 - 2.4529 1.00 2638 133 0.1435 0.1440 REMARK 3 5 2.4529 - 2.2771 1.00 2645 135 0.1327 0.1630 REMARK 3 6 2.2771 - 2.1429 1.00 2639 130 0.1273 0.1466 REMARK 3 7 2.1429 - 2.0356 1.00 2620 125 0.1214 0.1374 REMARK 3 8 2.0356 - 1.9470 1.00 2604 151 0.1154 0.1369 REMARK 3 9 1.9470 - 1.8721 1.00 2590 159 0.1096 0.1320 REMARK 3 10 1.8721 - 1.8075 1.00 2585 148 0.1050 0.1368 REMARK 3 11 1.8075 - 1.7510 1.00 2610 135 0.1045 0.1296 REMARK 3 12 1.7510 - 1.7009 1.00 2569 153 0.1008 0.1288 REMARK 3 13 1.7009 - 1.6561 1.00 2590 145 0.0969 0.1312 REMARK 3 14 1.6561 - 1.6157 1.00 2600 127 0.0976 0.1359 REMARK 3 15 1.6157 - 1.5790 1.00 2574 148 0.1012 0.1425 REMARK 3 16 1.5790 - 1.5454 1.00 2585 141 0.1112 0.1496 REMARK 3 17 1.5454 - 1.5145 1.00 2573 138 0.1138 0.1662 REMARK 3 18 1.5145 - 1.4859 1.00 2575 130 0.1221 0.1624 REMARK 3 19 1.4859 - 1.4594 1.00 2572 135 0.1292 0.1803 REMARK 3 20 1.4594 - 1.4346 1.00 2572 157 0.1374 0.1714 REMARK 3 21 1.4346 - 1.4115 1.00 2557 152 0.1508 0.1846 REMARK 3 22 1.4115 - 1.3898 1.00 2571 129 0.1632 0.1916 REMARK 3 23 1.3898 - 1.3693 1.00 2567 145 0.1890 0.2590 REMARK 3 24 1.3693 - 1.3500 0.99 2550 132 0.2107 0.2453 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.43 REMARK 3 B_SOL : 46.02 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.15450 REMARK 3 B22 (A**2) : -1.15450 REMARK 3 B33 (A**2) : 2.30890 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2001 REMARK 3 ANGLE : 1.172 2711 REMARK 3 CHIRALITY : 0.084 273 REMARK 3 PLANARITY : 0.005 359 REMARK 3 DIHEDRAL : 15.198 732 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OCU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000060954. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66003 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.40 REMARK 200 R MERGE FOR SHELL (I) : 0.60300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3ET4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23-28% (W/V) PEG 3350, 0.05-0.2 M REMARK 280 AMMONIUM CITRATE DIBASIC, 0.05-0.15 MM MGCL2, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.95467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.47733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.21600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 17.73867 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 88.69333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.95467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 35.47733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 17.73867 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 53.21600 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 88.69333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 470 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 471 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 473 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 475 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 HIS A 4 REMARK 465 GLN A 5 REMARK 465 MET A 6 REMARK 465 LYS A 7 REMARK 465 SER A 8 REMARK 465 GLU A 256 REMARK 465 HIS A 257 REMARK 465 HIS A 258 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 9 CG CD OE1 OE2 REMARK 470 GLU A 10 CG CD OE1 OE2 REMARK 470 LYS A 52 CD CE NZ REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 ASP A 157 CG OD1 OD2 REMARK 470 LYS A 158 CD CE NZ REMARK 470 LYS A 170 CG CD CE NZ REMARK 470 GLU A 230 CG CD OE1 OE2 REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 GLN A 238 CG CD OE1 NE2 REMARK 470 LYS A 254 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 140 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 65 -67.19 -99.34 REMARK 500 THR A 68 -57.81 -121.66 REMARK 500 LYS A 156 -89.88 -112.16 REMARK 500 LYS A 211 -87.44 -123.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 263 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD2 REMARK 620 2 ASN A 66 O 90.2 REMARK 620 3 ASP A 181 OD1 84.6 86.3 REMARK 620 4 HOH A 434 O 170.0 85.2 86.2 REMARK 620 5 HOH A 435 O 92.0 170.1 84.3 91.1 REMARK 620 6 NMN A2003 O3P 103.4 97.1 171.2 86.0 91.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 263 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NMN A 2003 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ET4 RELATED DB: PDB REMARK 900 RELATED ID: 3OCV RELATED DB: PDB REMARK 900 RELATED ID: 3OCW RELATED DB: PDB REMARK 900 RELATED ID: 3OCX RELATED DB: PDB REMARK 900 RELATED ID: 3OCY RELATED DB: PDB REMARK 900 RELATED ID: 3OCZ RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 G30E SEQUENCE CONFLICT IN UNP ENTRY P26093 DBREF 3OCU A 2 254 UNP P26093 HEL_HAEIN 22 274 SEQADV 3OCU MET A 1 UNP P26093 INITIATING METHIONINE SEQADV 3OCU GLU A 10 UNP P26093 GLY 30 SEE REMARK 999 SEQADV 3OCU ASN A 66 UNP P26093 ASP 86 ENGINEERED MUTATION SEQADV 3OCU LEU A 255 UNP P26093 EXPRESSION TAG SEQADV 3OCU GLU A 256 UNP P26093 EXPRESSION TAG SEQADV 3OCU HIS A 257 UNP P26093 EXPRESSION TAG SEQADV 3OCU HIS A 258 UNP P26093 EXPRESSION TAG SEQADV 3OCU HIS A 259 UNP P26093 EXPRESSION TAG SEQADV 3OCU HIS A 260 UNP P26093 EXPRESSION TAG SEQADV 3OCU HIS A 261 UNP P26093 EXPRESSION TAG SEQADV 3OCU HIS A 262 UNP P26093 EXPRESSION TAG SEQRES 1 A 262 MET GLY SER HIS GLN MET LYS SER GLU GLU HIS ALA ASN SEQRES 2 A 262 MET GLN LEU GLN GLN GLN ALA VAL LEU GLY LEU ASN TRP SEQRES 3 A 262 MET GLN ASP SER GLY GLU TYR LYS ALA LEU ALA TYR GLN SEQRES 4 A 262 ALA TYR ASN ALA ALA LYS VAL ALA PHE ASP HIS ALA LYS SEQRES 5 A 262 VAL ALA LYS GLY LYS LYS LYS ALA VAL VAL ALA ASP LEU SEQRES 6 A 262 ASN GLU THR MET LEU ASP ASN SER PRO TYR ALA GLY TRP SEQRES 7 A 262 GLN VAL GLN ASN ASN LYS PRO PHE ASP GLY LYS ASP TRP SEQRES 8 A 262 THR ARG TRP VAL ASP ALA ARG GLN SER ARG ALA VAL PRO SEQRES 9 A 262 GLY ALA VAL GLU PHE ASN ASN TYR VAL ASN SER HIS ASN SEQRES 10 A 262 GLY LYS VAL PHE TYR VAL THR ASN ARG LYS ASP SER THR SEQRES 11 A 262 GLU LYS SER GLY THR ILE ASP ASP MET LYS ARG LEU GLY SEQRES 12 A 262 PHE ASN GLY VAL GLU GLU SER ALA PHE TYR LEU LYS LYS SEQRES 13 A 262 ASP LYS SER ALA LYS ALA ALA ARG PHE ALA GLU ILE GLU SEQRES 14 A 262 LYS GLN GLY TYR GLU ILE VAL LEU TYR VAL GLY ASP ASN SEQRES 15 A 262 LEU ASP ASP PHE GLY ASN THR VAL TYR GLY LYS LEU ASN SEQRES 16 A 262 ALA ASP ARG ARG ALA PHE VAL ASP GLN ASN GLN GLY LYS SEQRES 17 A 262 PHE GLY LYS THR PHE ILE MET LEU PRO ASN ALA ASN TYR SEQRES 18 A 262 GLY GLY TRP GLU GLY GLY LEU ALA GLU GLY TYR PHE LYS SEQRES 19 A 262 LYS ASP THR GLN GLY GLN ILE LYS ALA ARG LEU ASP ALA SEQRES 20 A 262 VAL GLN ALA TRP ASP GLY LYS LEU GLU HIS HIS HIS HIS SEQRES 21 A 262 HIS HIS HET MG A 263 1 HET NMN A2003 22 HETNAM MG MAGNESIUM ION HETNAM NMN BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE HETSYN NMN NICOTINAMIDE MONONUCLEOTIDE FORMUL 2 MG MG 2+ FORMUL 3 NMN C11 H16 N2 O8 P 1+ FORMUL 4 HOH *274(H2 O) HELIX 1 1 GLU A 9 GLN A 19 1 11 HELIX 2 2 ALA A 20 SER A 30 1 11 HELIX 3 3 SER A 30 ALA A 51 1 22 HELIX 4 4 ASN A 72 ASN A 83 1 12 HELIX 5 5 ASP A 87 ALA A 97 1 11 HELIX 6 6 GLY A 105 HIS A 116 1 12 HELIX 7 7 GLU A 131 GLY A 143 1 13 HELIX 8 8 GLU A 148 SER A 150 5 3 HELIX 9 9 LYS A 161 GLN A 171 1 11 HELIX 10 10 ASN A 182 GLY A 187 5 6 HELIX 11 11 LEU A 194 ASN A 205 1 12 HELIX 12 12 GLN A 206 PHE A 209 5 4 HELIX 13 13 GLY A 222 GLY A 227 1 6 HELIX 14 14 GLY A 231 LYS A 235 5 5 HELIX 15 15 ASP A 236 VAL A 248 1 13 SHEET 1 A 5 PHE A 152 LYS A 155 0 SHEET 2 A 5 GLY A 118 LYS A 127 1 N TYR A 122 O TYR A 153 SHEET 3 A 5 LYS A 58 ALA A 63 1 N VAL A 61 O PHE A 121 SHEET 4 A 5 TYR A 173 GLY A 180 1 O GLU A 174 N LYS A 58 SHEET 5 A 5 PHE A 213 MET A 215 1 O ILE A 214 N TYR A 178 SHEET 1 B 2 LEU A 70 ASP A 71 0 SHEET 2 B 2 ARG A 101 ALA A 102 -1 O ARG A 101 N ASP A 71 LINK OD2 ASP A 64 MG MG A 263 1555 1555 2.03 LINK O ASN A 66 MG MG A 263 1555 1555 2.14 LINK OD1 ASP A 181 MG MG A 263 1555 1555 2.13 LINK MG MG A 263 O HOH A 434 1555 1555 2.18 LINK MG MG A 263 O HOH A 435 1555 1555 2.09 LINK MG MG A 263 O3P NMN A2003 1555 1555 1.94 SITE 1 AC1 6 ASP A 64 ASN A 66 ASP A 181 HOH A 434 SITE 2 AC1 6 HOH A 435 NMN A2003 SITE 1 AC2 21 ASP A 64 LEU A 65 ASN A 66 PHE A 86 SITE 2 AC2 21 TRP A 91 THR A 124 ASN A 125 ARG A 126 SITE 3 AC2 21 LYS A 161 TYR A 221 MG A 263 HOH A 321 SITE 4 AC2 21 HOH A 422 HOH A 423 HOH A 425 HOH A 434 SITE 5 AC2 21 HOH A 435 HOH A 438 HOH A 454 HOH A 469 SITE 6 AC2 21 HOH A 512 CRYST1 97.758 97.758 106.432 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010229 0.005906 0.000000 0.00000 SCALE2 0.000000 0.011812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009396 0.00000