HEADER MEMBRANE PROTEIN 11-AUG-10 3ODN TITLE THE CRYSTAL STRUCTURE OF DROSOPHILA DALLY-LIKE PROTEIN CORE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DALLY-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 74-399, 438-617; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: DLP, CG32146; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSGHV0 KEYWDS ALPHA HELICAL BUNDLE, HEDGEHOG SIGNALING, HEDGEHOG VIA CO- KEYWDS 2 IMMUNOPRECIPITATION, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.-S.KIM,D.J.LEAHY REVDAT 4 23-AUG-17 3ODN 1 SOURCE REMARK REVDAT 3 21-DEC-11 3ODN 1 DBREF SEQRES REVDAT 2 24-AUG-11 3ODN 1 JRNL REVDAT 1 27-JUL-11 3ODN 0 JRNL AUTH M.S.KIM,A.M.SAUNDERS,B.Y.HAMAOKA,P.A.BEACHY,D.J.LEAHY JRNL TITL STRUCTURE OF THE PROTEIN CORE OF THE GLYPICAN DALLY-LIKE AND JRNL TITL 2 LOCALIZATION OF A REGION IMPORTANT FOR HEDGEHOG SIGNALING. JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 13112 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 21828006 JRNL DOI 10.1073/PNAS.1109877108 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 20563 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1054 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.53 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3008 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2730 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2842 REMARK 3 BIN R VALUE (WORKING SET) : 0.2721 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.52 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 166 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2934 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 69 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.85290 REMARK 3 B22 (A**2) : -4.00100 REMARK 3 B33 (A**2) : 8.85390 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 8.98340 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.460 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.916 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.885 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2993 ; 2.000 ; NULL REMARK 3 BOND ANGLES : 4030 ; 2.000 ; NULL REMARK 3 TORSION ANGLES : 1066 ; 2.000 ; NULL REMARK 3 TRIGONAL CARBON PLANES : 81 ; 2.000 ; NULL REMARK 3 GENERAL PLANES : 428 ; 5.000 ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : 2993 ; 20.000 ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 391 ; 5.000 ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3460 ; 4.000 ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.15 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.56 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 21.31 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: A117 - A128 REMARK 3 ORIGIN FOR THE GROUP (A): 12.1149 65.9117 -9.5486 REMARK 3 T TENSOR REMARK 3 T11: -0.1354 T22: 0.2064 REMARK 3 T33: -0.1222 T12: 0.0836 REMARK 3 T13: -0.1695 T23: 0.1696 REMARK 3 L TENSOR REMARK 3 L11: -0.1254 L22: 0.0088 REMARK 3 L33: 0.5886 L12: -0.6872 REMARK 3 L13: 0.4904 L23: -0.7811 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: -0.0288 S13: 0.0194 REMARK 3 S21: 0.0625 S22: -0.0271 S23: 0.0629 REMARK 3 S31: -0.0197 S32: -0.0292 S33: 0.0323 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: A129 - A227 REMARK 3 ORIGIN FOR THE GROUP (A): 49.4383 48.3942 34.3086 REMARK 3 T TENSOR REMARK 3 T11: -0.0336 T22: -0.2364 REMARK 3 T33: -0.2631 T12: -0.0735 REMARK 3 T13: -0.1095 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 1.9366 L22: 1.6256 REMARK 3 L33: 9.0778 L12: -0.8314 REMARK 3 L13: 1.3139 L23: -2.7154 REMARK 3 S TENSOR REMARK 3 S11: 0.0172 S12: 0.1069 S13: -0.1833 REMARK 3 S21: -0.0550 S22: 0.3570 S23: 0.4001 REMARK 3 S31: 0.5929 S32: -0.4010 S33: -0.3742 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: A228 - A547 REMARK 3 ORIGIN FOR THE GROUP (A): 50.0064 58.2501 23.8548 REMARK 3 T TENSOR REMARK 3 T11: -0.1256 T22: -0.2055 REMARK 3 T33: -0.3452 T12: 0.0101 REMARK 3 T13: -0.0601 T23: 0.0353 REMARK 3 L TENSOR REMARK 3 L11: -0.0301 L22: 1.5042 REMARK 3 L33: 8.6991 L12: -0.8399 REMARK 3 L13: 0.8610 L23: -2.2777 REMARK 3 S TENSOR REMARK 3 S11: 0.0787 S12: -0.0429 S13: -0.1384 REMARK 3 S21: 0.2121 S22: 0.1926 S23: 0.1465 REMARK 3 S31: -0.4991 S32: -0.2695 S33: -0.2713 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: A548 - A614 REMARK 3 ORIGIN FOR THE GROUP (A): 38.3844 70.4551 7.0073 REMARK 3 T TENSOR REMARK 3 T11: 0.1033 T22: -0.0781 REMARK 3 T33: -0.3441 T12: 0.1525 REMARK 3 T13: -0.0223 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 3.4197 L22: 2.5764 REMARK 3 L33: 4.3225 L12: -1.7385 REMARK 3 L13: 3.0931 L23: -1.3315 REMARK 3 S TENSOR REMARK 3 S11: 0.1311 S12: -0.0197 S13: 0.1262 REMARK 3 S21: -0.1799 S22: -0.2566 S23: 0.1893 REMARK 3 S31: -0.5575 S32: -0.4197 S33: 0.1254 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3ODN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000060983. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20563 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M MG FORMATE, PH 6.7, REMARK 280 EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 48.51050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.21200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 48.51050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.21200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 74 REMARK 465 GLN A 75 REMARK 465 PHE A 76 REMARK 465 SER A 77 REMARK 465 PRO A 78 REMARK 465 GLU A 79 REMARK 465 CYS A 80 REMARK 465 SER A 81 REMARK 465 ALA A 82 REMARK 465 VAL A 83 REMARK 465 THR A 84 REMARK 465 HIS A 85 REMARK 465 ILE A 86 REMARK 465 PHE A 87 REMARK 465 GLN A 88 REMARK 465 ALA A 89 REMARK 465 ARG A 90 REMARK 465 GLY A 91 REMARK 465 ILE A 92 REMARK 465 ASP A 93 REMARK 465 ALA A 94 REMARK 465 ILE A 95 REMARK 465 GLU A 96 REMARK 465 ILE A 97 REMARK 465 PRO A 98 REMARK 465 GLN A 99 REMARK 465 LYS A 100 REMARK 465 PRO A 101 REMARK 465 SER A 102 REMARK 465 ASN A 103 REMARK 465 GLU A 104 REMARK 465 ARG A 105 REMARK 465 VAL A 106 REMARK 465 LEU A 107 REMARK 465 ARG A 108 REMARK 465 TYR A 109 REMARK 465 CYS A 110 REMARK 465 GLU A 111 REMARK 465 SER A 112 REMARK 465 PRO A 113 REMARK 465 SER A 114 REMARK 465 VAL A 115 REMARK 465 GLY A 116 REMARK 465 ASN A 289 REMARK 465 VAL A 290 REMARK 465 ARG A 291 REMARK 465 LEU A 292 REMARK 465 PRO A 433 REMARK 465 LYS A 434 REMARK 465 LEU A 435 REMARK 465 LYS A 436 REMARK 465 LYS A 437 REMARK 465 ARG A 438 REMARK 465 GLU A 439 REMARK 465 ARG A 440 REMARK 465 ARG A 441 REMARK 465 ALA A 442 REMARK 465 ALA A 443 REMARK 465 GLU A 444 REMARK 465 PRO A 445 REMARK 465 GLY A 446 REMARK 465 SER A 447 REMARK 465 GLN A 448 REMARK 465 GLU A 449 REMARK 465 THR A 450 REMARK 465 SER A 451 REMARK 465 SER A 452 REMARK 465 GLN A 453 REMARK 465 GLN A 454 REMARK 465 SER A 455 REMARK 465 GLN A 456 REMARK 465 GLU A 457 REMARK 465 GLN A 458 REMARK 465 GLY A 459 REMARK 465 VAL A 460 REMARK 465 GLY A 461 REMARK 465 LYS A 462 REMARK 465 SER A 463 REMARK 465 GLY A 464 REMARK 465 ASN A 465 REMARK 465 GLY A 466 REMARK 465 GLY A 467 REMARK 465 GLY A 468 REMARK 465 GLY A 469 REMARK 465 GLY A 470 REMARK 465 GLY A 471 REMARK 465 GLY A 472 REMARK 465 ASN A 473 REMARK 465 ASN A 474 REMARK 465 ARG A 475 REMARK 465 ARG A 476 REMARK 465 GLN A 477 REMARK 465 GLN A 478 REMARK 465 GLN A 479 REMARK 465 ARG A 480 REMARK 465 ARG A 481 REMARK 465 LYS A 482 REMARK 465 GLN A 483 REMARK 465 GLN A 484 REMARK 465 GLN A 485 REMARK 465 GLN A 486 REMARK 465 ARG A 487 REMARK 465 ARG A 488 REMARK 465 LYS A 489 REMARK 465 GLN A 490 REMARK 465 GLN A 491 REMARK 465 ASN A 492 REMARK 465 ASN A 493 REMARK 465 ARG A 494 REMARK 465 ASP A 495 REMARK 465 ASP A 496 REMARK 465 ASN A 497 REMARK 465 ASP A 498 REMARK 465 ASP A 499 REMARK 465 ASP A 500 REMARK 465 ASP A 501 REMARK 465 GLU A 502 REMARK 465 GLU A 503 REMARK 465 SER A 504 REMARK 465 GLY A 505 REMARK 465 GLY A 506 REMARK 465 GLY A 507 REMARK 465 ARG A 508 REMARK 465 HIS A 570 REMARK 465 GLY A 571 REMARK 465 THR A 577 REMARK 465 GLY A 578 REMARK 465 ASN A 579 REMARK 465 PRO A 580 REMARK 465 ALA A 581 REMARK 465 SER A 582 REMARK 465 THR A 583 REMARK 465 LYS A 584 REMARK 465 GLN A 585 REMARK 465 THR A 586 REMARK 465 ALA A 587 REMARK 465 GLN A 588 REMARK 465 SER A 615 REMARK 465 GLU A 616 REMARK 465 GLN A 617 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 117 OG1 CG2 REMARK 470 CYS A 118 SG REMARK 470 CYS A 119 SG REMARK 470 ARG A 394 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 509 CG CD OE1 OE2 REMARK 470 GLU A 569 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 229 53.82 -96.13 REMARK 500 LYS A 250 73.28 50.50 REMARK 500 ALA A 294 -52.45 15.08 REMARK 500 LEU A 329 32.33 -97.21 REMARK 500 CYS A 392 -69.96 -100.48 REMARK 500 VAL A 549 -31.71 -39.24 REMARK 500 MET A 552 34.32 -97.88 REMARK 500 HIS A 557 -60.24 -127.85 REMARK 500 MET A 563 34.80 -87.63 REMARK 500 THR A 568 -83.97 -134.38 REMARK 500 REMARK 500 REMARK: NULL DBREF 3ODN A 74 437 UNP Q9GPL5 Q9GPL5_DROME 74 399 DBREF 3ODN A 438 617 UNP Q9GPL5 Q9GPL5_DROME 438 617 SEQADV 3ODN GLU A 79 UNP Q9GPL5 ASN 79 ENGINEERED MUTATION SEQADV 3ODN GLU A 502 UNP Q9GPL5 ASN 502 ENGINEERED MUTATION SEQRES 1 A 506 ASP GLN PHE SER PRO GLU CYS SER ALA VAL THR HIS ILE SEQRES 2 A 506 PHE GLN ALA ARG GLY ILE ASP ALA ILE GLU ILE PRO GLN SEQRES 3 A 506 LYS PRO SER ASN GLU ARG VAL LEU ARG TYR CYS GLU SER SEQRES 4 A 506 PRO SER VAL GLY THR CYS CYS THR TYR ASN MET GLU THR SEQRES 5 A 506 ARG MET ALA MET GLN SER ARG GLN GLN LEU GLU GLY HIS SEQRES 6 A 506 THR LYS ASP GLN ILE SER ARG MET SER GLY ILE LEU GLY SEQRES 7 A 506 SER LYS ALA THR LYS PHE LYS ASP ILE PHE THR ALA LEU SEQRES 8 A 506 LEU LYS GLU SER ARG THR GLN PHE ASN SER MET PHE ILE SEQRES 9 A 506 ARG THR TYR GLY VAL ILE TYR GLU ARG ASN SER TYR VAL SEQRES 10 A 506 PHE SER ASP LEU PHE LYS GLU LEU GLU THR TYR PHE ALA SEQRES 11 A 506 ASN GLY ARG VAL ASP LEU LEU GLU VAL MET ASP LYS PHE SEQRES 12 A 506 PHE ASN THR LEU TYR GLN LYS MET PHE THR VAL LEU ASN SEQRES 13 A 506 THR GLN TYR THR PHE ASP GLU ASN TYR MET ARG CYS VAL SEQRES 14 A 506 SER GLU HIS MET LYS GLU LEU LYS PRO PHE GLY ASP VAL SEQRES 15 A 506 PRO ASP LYS LEU SER VAL GLN ILE LYS ARG SER PHE VAL SEQRES 16 A 506 ALA THR ARG THR TYR GLY GLN ALA LEU THR THR ALA SER SEQRES 17 A 506 GLU VAL ALA LYS LYS VAL LEU ASN VAL ARG LEU ASN ALA SEQRES 18 A 506 ASP CYS THR GLY ALA LEU THR LYS MET GLN HIS CYS GLY SEQRES 19 A 506 ALA CYS LYS GLY TYR THR GLU LYS PRO CYS THR ASN TYR SEQRES 20 A 506 CYS VAL ASN VAL ILE LYS GLY CYS LEU HIS TYR GLN HIS SEQRES 21 A 506 GLU PHE ASP SER GLU TRP GLU ASN PHE ALA MET ALA MET SEQRES 22 A 506 ASP LYS VAL ALA GLU ARG LEU LEU GLY SER PHE ASN ILE SEQRES 23 A 506 VAL MET VAL VAL GLU PRO LEU ASN ILE LYS ILE SER GLU SEQRES 24 A 506 ALA ILE MET ASN PHE GLN ASP SER GLY GLN ASP ILE THR SEQRES 25 A 506 ASN ARG VAL PHE GLN GLY CYS GLY ARG PRO LYS LEU LYS SEQRES 26 A 506 LYS ARG GLU ARG ARG ALA ALA GLU PRO GLY SER GLN GLU SEQRES 27 A 506 THR SER SER GLN GLN SER GLN GLU GLN GLY VAL GLY LYS SEQRES 28 A 506 SER GLY ASN GLY GLY GLY GLY GLY GLY GLY ASN ASN ARG SEQRES 29 A 506 ARG GLN GLN GLN ARG ARG LYS GLN GLN GLN GLN ARG ARG SEQRES 30 A 506 LYS GLN GLN ASN ASN ARG ASP ASP ASN ASP ASP ASP ASP SEQRES 31 A 506 GLU GLU SER GLY GLY GLY ARG GLU PRO ILE LEU ASP ARG SEQRES 32 A 506 ILE VAL ARG ASP ILE ARG GLN ARG VAL LYS ASP TYR LYS SEQRES 33 A 506 LYS PHE TRP SER ASN LEU PRO HIS SER VAL CYS SER ASN SEQRES 34 A 506 GLU ASP ILE ALA SER SER SER ASP VAL ASP GLY MET CYS SEQRES 35 A 506 TRP ASN GLY HIS THR ILE ASP ARG TYR MET HIS SER ILE SEQRES 36 A 506 THR THR GLU HIS GLY SER ASN PRO GLU PHE THR GLY ASN SEQRES 37 A 506 PRO ALA SER THR LYS GLN THR ALA GLN MET ALA SER GLN SEQRES 38 A 506 LEU SER HIS LEU LYS ASN ALA ILE VAL HIS LEU ARG ASN SEQRES 39 A 506 ALA TYR ASN GLY GLN ASP VAL GLU TRP SER GLU GLN FORMUL 2 HOH *69(H2 O) HELIX 1 1 THR A 120 TYR A 180 1 61 HELIX 2 2 GLY A 181 ASN A 187 1 7 HELIX 3 3 ASN A 187 GLY A 205 1 19 HELIX 4 4 ASP A 208 ASN A 229 1 22 HELIX 5 5 ASP A 235 LYS A 250 1 16 HELIX 6 6 ASP A 254 LEU A 288 1 35 HELIX 7 7 ALA A 294 HIS A 305 1 12 HELIX 8 8 GLY A 307 GLY A 311 5 5 HELIX 9 9 CYS A 317 LEU A 329 1 13 HELIX 10 10 GLN A 332 GLY A 355 1 24 HELIX 11 11 ILE A 359 GLU A 364 1 6 HELIX 12 12 PRO A 365 SER A 380 1 16 HELIX 13 13 SER A 380 CYS A 392 1 13 HELIX 14 14 PRO A 510 TYR A 526 1 17 HELIX 15 15 ASN A 532 ASN A 540 1 9 HELIX 16 16 SER A 547 GLY A 551 5 5 HELIX 17 17 MET A 589 ASN A 608 1 20 SSBOND 1 CYS A 241 CYS A 392 1555 1555 2.04 SSBOND 2 CYS A 296 CYS A 328 1555 1555 2.04 SSBOND 3 CYS A 317 CYS A 553 1555 1555 2.04 SSBOND 4 CYS A 321 CYS A 538 1555 1555 2.05 CRYST1 97.021 66.424 85.725 90.00 104.85 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010307 0.000000 0.002733 0.00000 SCALE2 0.000000 0.015055 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012068 0.00000