HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 13-AUG-10 3OEP TITLE CRYSTAL STRUCTURE OF TTHA0988 IN SPACE GROUP P43212 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN TTHA0988; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: TTHA0988; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS KIPI, KIPA, CYCLOPHILIN, ALLOPHANATE HYDROLASE, STRUCTURAL GENOMICS, KEYWDS 2 UNKNOWN FUNCTION, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI EXPDTA X-RAY DIFFRACTION AUTHOR D.A.JACQUES,D.B.LANGLEY,J.TREWHELLA,J.M.GUSS,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 5 03-APR-24 3OEP 1 REMARK REVDAT 4 20-MAR-24 3OEP 1 REMARK REVDAT 3 08-NOV-17 3OEP 1 REMARK REVDAT 2 02-FEB-11 3OEP 1 JRNL REVDAT 1 24-NOV-10 3OEP 0 JRNL AUTH D.A.JACQUES,D.B.LANGLEY,S.KURAMITSU,S.YOKOYAMA,J.TREWHELLA, JRNL AUTH 2 J.M.GUSS JRNL TITL THE STRUCTURE OF TTHA0988 FROM THERMUS THERMOPHILUS, A JRNL TITL 2 KIPI-KIPA HOMOLOGUE INCORRECTLY ANNOTATED AS AN ALLOPHANATE JRNL TITL 3 HYDROLASE JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 67 105 2011 JRNL REFN ISSN 0907-4449 JRNL PMID 21245531 JRNL DOI 10.1107/S0907444910051127 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 53882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2745 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3386 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.1910 REMARK 3 BIN FREE R VALUE SET COUNT : 176 REMARK 3 BIN FREE R VALUE : 0.2230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3640 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.848 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3861 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2796 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5292 ; 1.166 ; 2.029 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6760 ; 0.787 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 511 ; 5.505 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 147 ;30.894 ;20.408 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 564 ;11.049 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;14.558 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 577 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4351 ; 0.005 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): 818 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2477 ; 1.208 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 986 ; 0.359 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3977 ; 2.073 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1384 ; 3.011 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1304 ; 4.958 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 207 REMARK 3 ORIGIN FOR THE GROUP (A): -24.1416 36.6874 -15.4777 REMARK 3 T TENSOR REMARK 3 T11: 0.0147 T22: 0.0187 REMARK 3 T33: 0.0305 T12: 0.0077 REMARK 3 T13: 0.0143 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.6551 L22: 0.4991 REMARK 3 L33: 1.0531 L12: -0.1002 REMARK 3 L13: 0.3917 L23: 0.0605 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: -0.0125 S13: 0.0143 REMARK 3 S21: 0.0500 S22: 0.0392 S23: -0.0166 REMARK 3 S31: -0.0094 S32: -0.0052 S33: -0.0107 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 208 A 383 REMARK 3 ORIGIN FOR THE GROUP (A): 7.7473 24.5358 -19.9342 REMARK 3 T TENSOR REMARK 3 T11: 0.0022 T22: 0.0503 REMARK 3 T33: 0.0150 T12: -0.0030 REMARK 3 T13: 0.0022 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.0986 L22: 0.4468 REMARK 3 L33: 0.8027 L12: -0.1882 REMARK 3 L13: -0.5138 L23: 0.0701 REMARK 3 S TENSOR REMARK 3 S11: 0.0021 S12: -0.0316 S13: 0.0256 REMARK 3 S21: 0.0100 S22: -0.0296 S23: -0.0235 REMARK 3 S31: -0.0188 S32: 0.0576 S33: 0.0275 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 384 A 493 REMARK 3 ORIGIN FOR THE GROUP (A): -11.4736 18.0656 -1.7144 REMARK 3 T TENSOR REMARK 3 T11: 0.0191 T22: 0.0320 REMARK 3 T33: 0.0289 T12: -0.0116 REMARK 3 T13: 0.0222 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 0.8205 L22: 0.8991 REMARK 3 L33: 1.3032 L12: -0.4993 REMARK 3 L13: -0.4846 L23: -0.0706 REMARK 3 S TENSOR REMARK 3 S11: -0.0490 S12: 0.0163 S13: -0.0302 REMARK 3 S21: 0.0522 S22: -0.0393 S23: 0.0664 REMARK 3 S31: 0.1025 S32: 0.0319 S33: 0.0883 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES REMARK 4 REMARK 4 3OEP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000061021. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95369 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53995 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.10 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : 0.81700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 1.3.3 REMARK 200 STARTING MODEL: IDENTICAL PROTEIN IN SPACEGROUP P212121 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17.9%(W/V) PEG 8000, 10.5%(V/V) REMARK 280 GLYCEROL, 60MM SODIUM CACODYLATE, PH 6.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.51600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.64450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.64450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 137.27400 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.64450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.64450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.75800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.64450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.64450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 137.27400 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.64450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.64450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.75800 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 91.51600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 69 REMARK 465 GLU A 70 REMARK 465 ARG A 71 REMARK 465 ALA A 72 REMARK 465 GLU A 73 REMARK 465 GLU A 74 REMARK 465 GLY A 75 REMARK 465 GLY A 494 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 N CA CB CG SD CE REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 ARG A 53 CD NE CZ NH1 NH2 REMARK 470 ARG A 59 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 65 CD CE NZ REMARK 470 GLU A 79 CG CD OE1 OE2 REMARK 470 GLU A 184 CG CD OE1 OE2 REMARK 470 ARG A 190 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 217 CG CD OE1 OE2 REMARK 470 GLU A 388 CG CD OE1 OE2 REMARK 470 ARG A 391 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 417 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 429 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 43 -129.80 53.72 REMARK 500 MET A 231 80.93 -158.83 REMARK 500 ASP A 236 -156.97 -109.00 REMARK 500 SER A 250 -143.90 56.06 REMARK 500 TYR A 278 -55.90 71.06 REMARK 500 VAL A 330 -9.61 -142.38 REMARK 500 LEU A 457 -166.54 -118.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003001624.1 RELATED DB: TARGETDB DBREF 3OEP A 1 494 UNP Q5SJM0 Q5SJM0_THET8 1 494 SEQRES 1 A 494 MET VAL ARG GLY PHE TYR LEU ARG PHE GLY GLU GLY VAL SEQRES 2 A 494 SER GLU GLU ALA ASN ARG ARG ALA LEU ALA LEU ALA GLU SEQRES 3 A 494 ALA LEU LEU ARG ALA PRO PRO PRO GLY LEU LEU ASP ALA SEQRES 4 A 494 VAL PRO ALA TYR GLY VAL LEU TYR LEU GLU TYR ASP PRO SEQRES 5 A 494 ARG ARG LEU SER ARG GLY ARG LEU LEU ARG LEU LEU LYS SEQRES 6 A 494 GLY LEU PRO GLN GLU ARG ALA GLU GLU GLY ARG VAL VAL SEQRES 7 A 494 GLU ILE PRO VAL ARG TYR ASP GLY GLU ASP LEU PRO GLU SEQRES 8 A 494 VAL ALA SER ARG LEU GLY LEU SER LEU GLU ALA VAL LYS SEQRES 9 A 494 ALA LEU HIS GLN LYS PRO LEU TYR ARG VAL TYR ALA LEU SEQRES 10 A 494 GLY PHE THR PRO GLY PHE PRO PHE LEU ALA GLU VAL GLU SEQRES 11 A 494 PRO ALA LEU ARG LEU PRO ARG LYS PRO HIS PRO ARG PRO SEQRES 12 A 494 ARG VAL PRO ALA HIS ALA VAL ALA VAL ALA GLY VAL GLN SEQRES 13 A 494 THR GLY ILE TYR PRO LEU PRO SER PRO GLY GLY TRP ASN SEQRES 14 A 494 LEU LEU GLY THR SER LEU VAL ALA VAL TYR ASP PRO HIS SEQRES 15 A 494 ARG GLU THR PRO PHE LEU LEU ARG PRO GLY ASP ARG VAL SEQRES 16 A 494 ARG PHE LEU GLU ALA GLU GLY PRO THR PRO PRO GLU PRO SEQRES 17 A 494 ARG PRO LEU GLU LEU LEU PRO GLU GLU PRO ARG LEU PRO SEQRES 18 A 494 ALA LEU LEU VAL GLU GLU PRO GLY LEU MET ASP LEU VAL SEQRES 19 A 494 VAL ASP GLY GLY ARG PHE LEU GLY GLY HIS LEU GLY LEU SEQRES 20 A 494 ALA ARG SER GLY PRO LEU ASP ALA PRO SER ALA ARG LEU SEQRES 21 A 494 ALA ASN ARG LEU VAL GLY ASN GLY ALA GLY ALA PRO LEU SEQRES 22 A 494 LEU GLU PHE ALA TYR LYS GLY PRO VAL LEU THR ALA LEU SEQRES 23 A 494 ARG ASP LEU VAL ALA ALA PHE ALA GLY TYR GLY PHE VAL SEQRES 24 A 494 ALA LEU LEU GLU GLY GLU GLU ILE PRO PRO GLY GLN SER SEQRES 25 A 494 PHE LEU TRP PRO ARG GLY LYS THR LEU ARG PHE ARG PRO SEQRES 26 A 494 ARG GLY PRO GLY VAL ARG GLY TYR LEU ALA VAL ALA GLY SEQRES 27 A 494 GLY LEU GLU VAL ARG PRO PHE LEU GLY SER ALA SER PRO SEQRES 28 A 494 ASP LEU ARG GLY ARG ILE GLY ARG PRO LEU TRP ALA GLY SEQRES 29 A 494 ASP VAL LEU GLY LEU GLU ALA LEU ARG PRO VAL ARG PRO SEQRES 30 A 494 GLY ARG ALA PHE PRO GLN ARG PRO LEU PRO GLU ALA PHE SEQRES 31 A 494 ARG LEU ARG LEU LEU PRO GLY PRO GLN PHE ALA GLY GLU SEQRES 32 A 494 ALA PHE ARG ALA LEU CYS SER GLY PRO PHE ARG VAL ALA SEQRES 33 A 494 ARG ALA ASP ARG VAL GLY VAL GLU LEU LEU GLY PRO GLU SEQRES 34 A 494 VAL PRO GLY GLY GLU GLY LEU SER GLU PRO THR PRO LEU SEQRES 35 A 494 GLY GLY VAL GLN VAL PRO PRO SER GLY ARG PRO LEU VAL SEQRES 36 A 494 LEU LEU ALA ASP LYS GLY SER LEU GLY GLY TYR ALA LYS SEQRES 37 A 494 PRO ALA LEU VAL ASP PRO ARG ASP LEU TRP LEU LEU GLY SEQRES 38 A 494 GLN ALA ARG PRO GLY VAL GLU ILE HIS PHE THR SER GLY HET GOL A 500 6 HET GOL A 501 6 HET GOL A 502 6 HET SO4 A 600 5 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *500(H2 O) HELIX 1 1 SER A 14 ALA A 31 1 18 HELIX 2 2 SER A 56 LEU A 67 1 12 HELIX 3 3 ASP A 88 GLY A 97 1 10 HELIX 4 4 SER A 99 LYS A 109 1 11 HELIX 5 5 GLU A 130 ARG A 134 5 5 HELIX 6 6 GLY A 242 GLY A 246 5 5 HELIX 7 7 ASP A 254 VAL A 265 1 12 HELIX 8 8 ALA A 401 CYS A 409 1 9 HELIX 9 9 ASP A 476 GLY A 481 1 6 SHEET 1 A 3 ARG A 3 ARG A 8 0 SHEET 2 A 3 VAL A 45 TYR A 50 -1 O LEU A 46 N LEU A 7 SHEET 3 A 3 LEU A 36 ALA A 42 -1 N LEU A 37 O GLU A 49 SHEET 1 B 8 VAL A 77 ARG A 83 0 SHEET 2 B 8 ASN A 169 SER A 174 -1 O THR A 173 N ARG A 83 SHEET 3 B 8 ALA A 149 ALA A 153 -1 N VAL A 150 O GLY A 172 SHEET 4 B 8 GLN A 156 ILE A 159 -1 O GLN A 156 N ALA A 153 SHEET 5 B 8 PRO A 124 ALA A 127 -1 N LEU A 126 O THR A 157 SHEET 6 B 8 TYR A 112 LEU A 117 -1 N ALA A 116 O PHE A 125 SHEET 7 B 8 ARG A 194 GLU A 199 -1 O VAL A 195 N TYR A 112 SHEET 8 B 8 VAL A 77 ARG A 83 1 N ILE A 80 O ARG A 196 SHEET 1 C 2 ARG A 142 VAL A 145 0 SHEET 2 C 2 SER A 164 GLY A 166 -1 O SER A 164 N VAL A 145 SHEET 1 D 6 GLU A 305 ILE A 307 0 SHEET 2 D 6 PHE A 298 LEU A 302 -1 N ALA A 300 O ILE A 307 SHEET 3 D 6 THR A 320 PRO A 325 -1 O ARG A 322 N LEU A 301 SHEET 4 D 6 VAL A 282 ALA A 285 -1 N LEU A 283 O LEU A 321 SHEET 5 D 6 PRO A 221 GLU A 227 -1 N LEU A 224 O THR A 284 SHEET 6 D 6 VAL A 366 GLY A 368 -1 O LEU A 367 N ALA A 222 SHEET 1 E 5 LEU A 233 VAL A 235 0 SHEET 2 E 5 LEU A 273 ALA A 277 -1 O GLU A 275 N LEU A 233 SHEET 3 E 5 ARG A 331 VAL A 336 -1 O GLY A 332 N PHE A 276 SHEET 4 E 5 LEU A 289 GLY A 295 -1 N ALA A 294 O TYR A 333 SHEET 5 E 5 GLN A 311 TRP A 315 -1 O TRP A 315 N LEU A 289 SHEET 1 F 9 GLU A 434 PRO A 439 0 SHEET 2 F 9 LEU A 463 VAL A 472 -1 O GLY A 465 N GLY A 435 SHEET 3 F 9 GLY A 444 VAL A 447 -1 N VAL A 447 O ALA A 467 SHEET 4 F 9 LEU A 454 LEU A 456 -1 O LEU A 454 N GLN A 446 SHEET 5 F 9 GLY A 422 LEU A 426 -1 N VAL A 423 O VAL A 455 SHEET 6 F 9 PHE A 413 ALA A 418 -1 N ALA A 416 O GLU A 424 SHEET 7 F 9 GLU A 488 THR A 492 -1 O ILE A 489 N PHE A 413 SHEET 8 F 9 PHE A 390 PRO A 396 1 N LEU A 394 O THR A 492 SHEET 9 F 9 LEU A 463 VAL A 472 -1 O LEU A 471 N LEU A 395 CISPEP 1 ALA A 127 GLU A 128 0 3.36 SITE 1 AC1 8 GLY A 97 ARG A 287 ASP A 288 LEU A 289 SITE 2 AC1 8 VAL A 290 HOH A 586 HOH A 664 HOH A 757 SITE 1 AC2 8 PHE A 119 PHE A 125 TYR A 160 GLY A 166 SITE 2 AC2 8 TRP A 168 HOH A 749 HOH A 828 HOH A 834 SITE 1 AC3 8 GLU A 201 GLY A 202 PRO A 203 ARG A 414 SITE 2 AC3 8 ALA A 416 LEU A 426 GLY A 486 HOH A 518 SITE 1 AC4 4 ARG A 263 GLY A 268 ALA A 269 HOH A 806 CRYST1 75.289 75.289 183.032 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013282 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013282 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005464 0.00000