HEADER TRANSFERASE 17-AUG-10 3OH1 TITLE PROTEIN STRUCTURE OF USP FROM L. MAJOR BOUND TO URIDINE-5'- TITLE 2 DIPHOSPHATE-GALACTURONIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-SUGAR PYROPHOSPHORYLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.64; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MAJOR; SOURCE 3 ORGANISM_TAXID: 5664; SOURCE 4 STRAIN: 5ASKH; SOURCE 5 GENE: USP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS LEFT HANDED BETA HELIX, ROSSMANN FOLD, UDP SUGAR PYROPHOSPHORYLASE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.DICKMANNS,S.DAMEROW,P.NEUMANN,E.-C.SCHULZ,A.LAMERZ,F.ROUTIER, AUTHOR 2 R.FICNER REVDAT 4 06-SEP-23 3OH1 1 REMARK SEQADV REVDAT 3 16-MAR-11 3OH1 1 JRNL REVDAT 2 05-JAN-11 3OH1 1 JRNL REVDAT 1 17-NOV-10 3OH1 0 JRNL AUTH A.DICKMANNS,S.DAMEROW,P.NEUMANN,E.C.SCHULZ,A.C.LAMERZ, JRNL AUTH 2 F.H.ROUTIER,R.FICNER JRNL TITL STRUCTURAL BASIS FOR THE BROAD SUBSTRATE RANGE OF THE JRNL TITL 2 UDP-SUGAR PYROPHOSPHORYLASE FROM LEISHMANIA MAJOR. JRNL REF J.MOL.BIOL. V. 405 461 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21073876 JRNL DOI 10.1016/J.JMB.2010.10.057 REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.1_357 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 37777 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1840 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5113 - 5.1145 0.96 2839 146 0.1503 0.1706 REMARK 3 2 5.1145 - 4.0629 1.00 2977 129 0.1367 0.1717 REMARK 3 3 4.0629 - 3.5503 0.99 2923 148 0.1644 0.1933 REMARK 3 4 3.5503 - 3.2261 0.99 2921 139 0.1733 0.2238 REMARK 3 5 3.2261 - 2.9951 1.00 2921 146 0.1781 0.1939 REMARK 3 6 2.9951 - 2.8187 1.00 2932 152 0.1941 0.2672 REMARK 3 7 2.8187 - 2.6776 1.00 2923 149 0.1917 0.2795 REMARK 3 8 2.6776 - 2.5611 1.00 2896 167 0.1925 0.2531 REMARK 3 9 2.5611 - 2.4626 1.00 2919 145 0.1861 0.2248 REMARK 3 10 2.4626 - 2.3776 0.99 2885 150 0.2064 0.2573 REMARK 3 11 2.3776 - 2.3033 0.86 2505 133 0.2956 0.3688 REMARK 3 12 2.3033 - 2.2375 0.83 2419 142 0.5170 0.5493 REMARK 3 13 2.2375 - 2.1800 0.64 1877 94 0.5759 0.5912 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 56.86 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.09270 REMARK 3 B22 (A**2) : -8.11250 REMARK 3 B33 (A**2) : 0.01980 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.84220 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 4700 REMARK 3 ANGLE : 1.376 6397 REMARK 3 CHIRALITY : 0.090 736 REMARK 3 PLANARITY : 0.006 826 REMARK 3 DIHEDRAL : 19.037 1769 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:76) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8052 29.8801 48.4837 REMARK 3 T TENSOR REMARK 3 T11: 0.5655 T22: 0.5203 REMARK 3 T33: 0.6450 T12: -0.2675 REMARK 3 T13: 0.1568 T23: -0.0975 REMARK 3 L TENSOR REMARK 3 L11: 3.8071 L22: 0.9143 REMARK 3 L33: 1.4435 L12: 0.5472 REMARK 3 L13: -1.2868 L23: 0.3308 REMARK 3 S TENSOR REMARK 3 S11: 0.2088 S12: -0.1395 S13: 0.2834 REMARK 3 S21: 0.5636 S22: -0.1605 S23: 0.3599 REMARK 3 S31: 0.5597 S32: -0.1913 S33: 0.0137 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 77:85 OR RESID 300:356) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1269 12.8163 24.5405 REMARK 3 T TENSOR REMARK 3 T11: 0.9982 T22: 0.5730 REMARK 3 T33: 1.2759 T12: -0.4450 REMARK 3 T13: 0.0387 T23: 0.0331 REMARK 3 L TENSOR REMARK 3 L11: 1.4506 L22: 0.6718 REMARK 3 L33: 1.8303 L12: 0.5399 REMARK 3 L13: 1.1702 L23: 1.0592 REMARK 3 S TENSOR REMARK 3 S11: -0.3940 S12: 0.1427 S13: 0.9949 REMARK 3 S21: -0.6761 S22: 0.0240 S23: -0.3955 REMARK 3 S31: -1.2538 S32: 0.4505 S33: 0.2711 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 86:195 OR RESID 224:299 OR RESID REMARK 3 357:378 OR RESID 406:615) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5210 -6.6327 24.5975 REMARK 3 T TENSOR REMARK 3 T11: 0.2657 T22: 0.2706 REMARK 3 T33: 0.2353 T12: -0.0480 REMARK 3 T13: 0.0124 T23: 0.0475 REMARK 3 L TENSOR REMARK 3 L11: 1.2525 L22: 2.1650 REMARK 3 L33: 2.0898 L12: -0.2523 REMARK 3 L13: 0.2725 L23: 0.3197 REMARK 3 S TENSOR REMARK 3 S11: 0.1767 S12: -0.0112 S13: 0.0711 REMARK 3 S21: -0.0199 S22: -0.1593 S23: -0.3028 REMARK 3 S31: -0.0860 S32: 0.0069 S33: -0.0101 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 379:405) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7786 25.8615 30.2983 REMARK 3 T TENSOR REMARK 3 T11: 0.7127 T22: 0.5179 REMARK 3 T33: 0.4528 T12: -0.2057 REMARK 3 T13: -0.1141 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 1.2574 L22: 0.5091 REMARK 3 L33: 1.9208 L12: 0.2243 REMARK 3 L13: 1.1018 L23: 0.8700 REMARK 3 S TENSOR REMARK 3 S11: -0.0545 S12: 0.2722 S13: -0.2702 REMARK 3 S21: -0.3142 S22: 0.1177 S23: 0.0834 REMARK 3 S31: -0.4236 S32: 0.3569 S33: -0.0706 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 196:223) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7480 25.6545 38.0471 REMARK 3 T TENSOR REMARK 3 T11: 0.5253 T22: 0.4809 REMARK 3 T33: 0.7786 T12: -0.2112 REMARK 3 T13: -0.0514 T23: -0.1420 REMARK 3 L TENSOR REMARK 3 L11: 2.6418 L22: 1.1045 REMARK 3 L33: 0.7179 L12: 1.4560 REMARK 3 L13: 0.9977 L23: 0.5276 REMARK 3 S TENSOR REMARK 3 S11: -0.0250 S12: 0.1363 S13: 0.3607 REMARK 3 S21: -0.1617 S22: -0.4148 S23: 0.8272 REMARK 3 S31: 0.1857 S32: -0.3082 S33: 0.3751 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OH1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000061105. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7-8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39879 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : 0.04400 REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.30100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 3OGZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1-0.2 M SODIUM TARTRATE, 16-20% REMARK 280 PEG5000, 10 MM DTT, PH 7-8, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 54.11300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.16000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 54.11300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 61.16000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 657 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 691 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 LYS A 237 REMARK 465 ARG A 238 REMARK 465 ASP A 239 REMARK 465 VAL A 240 REMARK 465 VAL A 241 REMARK 465 PRO A 242 REMARK 465 ASP A 243 REMARK 465 SER A 244 REMARK 465 GLY A 245 REMARK 465 ASP A 246 REMARK 465 GLY A 247 REMARK 465 THR A 248 REMARK 465 ALA A 249 REMARK 465 THR A 250 REMARK 465 ASN A 339 REMARK 465 LYS A 340 REMARK 465 ASP A 341 REMARK 465 GLY A 342 REMARK 465 GLY A 343 REMARK 465 ASP A 344 REMARK 465 GLU A 345 REMARK 465 VAL A 346 REMARK 465 SER A 347 REMARK 465 ASP A 348 REMARK 465 PRO A 349 REMARK 465 THR A 350 REMARK 465 ASN A 611 REMARK 465 THR A 612 REMARK 465 LYS A 613 REMARK 465 GLY A 614 REMARK 465 GLU A 615 REMARK 465 SER A 616 REMARK 465 GLU A 617 REMARK 465 ALA A 618 REMARK 465 GLY A 619 REMARK 465 ALA A 620 REMARK 465 PRO A 621 REMARK 465 SER A 622 REMARK 465 GLY A 623 REMARK 465 ALA A 624 REMARK 465 ALA A 625 REMARK 465 ASP A 626 REMARK 465 PRO A 627 REMARK 465 ALA A 628 REMARK 465 LYS A 629 REMARK 465 LEU A 630 REMARK 465 MET A 631 REMARK 465 ARG A 632 REMARK 465 ARG A 633 REMARK 465 LEU A 634 REMARK 465 GLU A 635 REMARK 465 HIS A 636 REMARK 465 HIS A 637 REMARK 465 HIS A 638 REMARK 465 HIS A 639 REMARK 465 HIS A 640 REMARK 465 HIS A 641 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS A 610 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 126 N GLY A 129 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 596 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 23 40.33 -102.98 REMARK 500 HIS A 25 1.10 -62.58 REMARK 500 ALA A 121 46.48 -141.43 REMARK 500 ARG A 127 -28.06 -31.48 REMARK 500 THR A 214 0.78 -69.94 REMARK 500 THR A 272 36.29 -143.28 REMARK 500 LYS A 315 -70.88 -56.02 REMARK 500 SER A 353 137.98 -173.56 REMARK 500 ASN A 360 33.97 70.67 REMARK 500 THR A 392 -92.30 -91.28 REMARK 500 ARG A 394 28.09 -73.22 REMARK 500 SER A 506 -129.02 60.51 REMARK 500 MET A 605 118.60 -171.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UGB A 642 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 643 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 644 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OH0 RELATED DB: PDB REMARK 900 RELATED ID: 3OGZ RELATED DB: PDB REMARK 900 RELATED ID: 3OH2 RELATED DB: PDB REMARK 900 RELATED ID: 3OH3 RELATED DB: PDB REMARK 900 RELATED ID: 3OH4 RELATED DB: PDB DBREF 3OH1 A 1 630 UNP D3G6S4 D3G6S4_LEIMA 1 630 SEQADV 3OH1 MET A 631 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 ARG A 632 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 ARG A 633 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 LEU A 634 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 GLU A 635 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 HIS A 636 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 HIS A 637 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 HIS A 638 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 HIS A 639 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 HIS A 640 UNP D3G6S4 EXPRESSION TAG SEQADV 3OH1 HIS A 641 UNP D3G6S4 EXPRESSION TAG SEQRES 1 A 641 MET THR ASN PRO SER ASN SER ASN LEU GLN ALA LEU ARG SEQRES 2 A 641 GLU GLU LEU CYS THR PRO GLY LEU ASP GLN GLY HIS LEU SEQRES 3 A 641 PHE GLU GLY TRP PRO GLU THR VAL ASP GLU CYS ASN GLU SEQRES 4 A 641 ARG GLN ILE ALA LEU LEU THR ASP LEU TYR MET PHE SER SEQRES 5 A 641 ASN MET TYR PRO GLY GLY VAL ALA GLN TYR ILE ARG ASN SEQRES 6 A 641 GLY HIS GLU LEU LEU ALA ARG GLU SER GLU GLU VAL ASP SEQRES 7 A 641 PHE ALA ALA LEU GLU MET PRO PRO LEU ILE PHE GLU ALA SEQRES 8 A 641 PRO SER LEU HIS ARG ARG THR ALA GLU ARG THR ALA LEU SEQRES 9 A 641 GLU ASN ALA GLY THR ALA MET LEU CYS LYS THR VAL PHE SEQRES 10 A 641 VAL LEU VAL ALA GLY GLY LEU GLY GLU ARG LEU GLY TYR SEQRES 11 A 641 SER SER ILE LYS VAL SER LEU PRO VAL GLU THR ALA THR SEQRES 12 A 641 ASN THR THR TYR LEU ALA TYR TYR LEU ARG TRP ALA GLN SEQRES 13 A 641 ARG VAL GLY GLY LYS GLU VAL PRO PHE VAL ILE MET THR SEQRES 14 A 641 SER ASP ASP THR HIS ASP ARG THR LEU GLN LEU LEU ARG SEQRES 15 A 641 GLU LEU GLN LEU GLU VAL PRO ASN LEU HIS VAL LEU LYS SEQRES 16 A 641 GLN GLY GLN VAL PHE CYS PHE ALA ASP SER ALA ALA HIS SEQRES 17 A 641 LEU ALA LEU ASP GLU THR GLY LYS LEU LEU ARG LYS PRO SEQRES 18 A 641 HIS GLY HIS GLY ASP VAL HIS SER LEU ILE TYR ASN ALA SEQRES 19 A 641 THR VAL LYS ARG ASP VAL VAL PRO ASP SER GLY ASP GLY SEQRES 20 A 641 THR ALA THR ALA GLN PRO LEU VAL ASN ASP TRP LEU ALA SEQRES 21 A 641 ALA GLY TYR GLU SER ILE VAL PHE ILE GLN ASP THR ASN SEQRES 22 A 641 ALA GLY ALA THR ILE THR ILE PRO ILE SER LEU ALA LEU SEQRES 23 A 641 SER ALA GLU HIS SER LEU ASP MET ASN PHE THR CYS ILE SEQRES 24 A 641 PRO ARG VAL PRO LYS GLU PRO ILE GLY LEU LEU CYS ARG SEQRES 25 A 641 THR LYS LYS ASN SER GLY ASP PRO TRP LEU VAL ALA ASN SEQRES 26 A 641 VAL GLU TYR ASN VAL PHE ALA GLU VAL SER ARG ALA LEU SEQRES 27 A 641 ASN LYS ASP GLY GLY ASP GLU VAL SER ASP PRO THR GLY SEQRES 28 A 641 PHE SER PRO PHE PRO GLY SER VAL ASN THR LEU VAL PHE SEQRES 29 A 641 LYS LEU SER SER TYR VAL ASP ARG LEU ARG GLU SER HIS SEQRES 30 A 641 GLY ILE VAL PRO GLU PHE ILE ASN PRO LYS TYR SER ASP SEQRES 31 A 641 GLU THR ARG ARG SER PHE LYS LYS PRO ALA ARG ILE GLU SEQRES 32 A 641 SER LEU MET GLN ASP ILE ALA LEU LEU PHE SER GLU ASP SEQRES 33 A 641 ASP TYR ARG VAL GLY GLY THR VAL PHE GLU ARG PHE SER SEQRES 34 A 641 TYR GLN PRO VAL LYS ASN SER LEU GLU GLU ALA ALA GLY SEQRES 35 A 641 LEU VAL ALA GLN GLY ASN GLY ALA TYR CYS ALA ALA THR SEQRES 36 A 641 GLY GLU ALA ALA PHE TYR GLU LEU GLN ARG ARG ARG LEU SEQRES 37 A 641 LYS ALA ILE GLY LEU PRO LEU PHE TYR SER SER GLN PRO SEQRES 38 A 641 GLU VAL THR VAL ALA LYS ASP ALA PHE GLY VAL ARG LEU SEQRES 39 A 641 PHE PRO ILE ILE VAL LEU ASP THR VAL CYS ALA SER SER SEQRES 40 A 641 GLY SER LEU ASP ASP LEU ALA ARG VAL PHE PRO THR PRO SEQRES 41 A 641 GLU LYS VAL HIS ILE ASP GLN HIS SER THR LEU ILE VAL SEQRES 42 A 641 GLU GLY ARG VAL ILE ILE GLU SER LEU GLU LEU TYR GLY SEQRES 43 A 641 ALA LEU THR ILE ARG GLY PRO THR ASP SER MET ALA LEU SEQRES 44 A 641 PRO HIS VAL VAL ARG ASN ALA VAL VAL ARG ASN ALA GLY SEQRES 45 A 641 TRP SER VAL HIS ALA ILE LEU SER LEU CYS ALA GLY ARG SEQRES 46 A 641 ASP SER ARG LEU SER GLU VAL ASP ARG ILE ARG GLY PHE SEQRES 47 A 641 VAL LEU LYS LYS THR ALA MET ALA VAL MET ASP CYS ASN SEQRES 48 A 641 THR LYS GLY GLU SER GLU ALA GLY ALA PRO SER GLY ALA SEQRES 49 A 641 ALA ASP PRO ALA LYS LEU MET ARG ARG LEU GLU HIS HIS SEQRES 50 A 641 HIS HIS HIS HIS HET UGB A 642 37 HET GOL A 643 6 HET GOL A 644 6 HETNAM UGB (2S,3R,4S,5R,6R)-6-[[[(2R,3S,4R,5R)-5-(2,4- HETNAM 2 UGB DIOXOPYRIMIDIN-1-YL)-3,4-DIHYDROXY-OXOLAN-2- HETNAM 3 UGB YL]METHOXY-HYDROXY-PHOSPHORYL]OXY-HYDROXY- HETNAM 4 UGB PHOSPHORYL]OXY-3,4,5-TRIHYDROXY-OXANE-2-CARBOXYLIC HETNAM 5 UGB ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 UGB C15 H22 N2 O18 P2 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *219(H2 O) HELIX 1 1 SER A 5 CYS A 17 1 13 HELIX 2 2 GLN A 23 PHE A 27 5 5 HELIX 3 3 ASN A 38 PHE A 51 1 14 HELIX 4 4 SER A 52 MET A 54 5 3 HELIX 5 5 GLY A 57 GLU A 73 1 17 HELIX 6 6 THR A 98 LEU A 112 1 15 HELIX 7 7 ILE A 133 LEU A 137 5 5 HELIX 8 8 THR A 146 GLY A 160 1 15 HELIX 9 9 THR A 173 LEU A 184 1 12 HELIX 10 10 GLY A 223 GLY A 225 5 3 HELIX 11 11 ASP A 226 ALA A 234 1 9 HELIX 12 12 PRO A 253 ALA A 261 1 9 HELIX 13 13 GLY A 275 HIS A 290 1 16 HELIX 14 14 GLU A 327 LEU A 338 1 12 HELIX 15 15 LEU A 366 HIS A 377 1 12 HELIX 16 16 LEU A 405 PHE A 413 5 9 HELIX 17 17 GLU A 426 TYR A 430 5 5 HELIX 18 18 SER A 436 GLN A 446 1 11 HELIX 19 19 CYS A 452 ILE A 471 1 20 HELIX 20 20 ASP A 501 SER A 506 1 6 HELIX 21 21 SER A 509 PHE A 517 1 9 HELIX 22 22 THR A 519 GLU A 521 5 3 HELIX 23 23 SER A 590 ILE A 595 1 6 SHEET 1 A 3 ALA A 81 GLU A 83 0 SHEET 2 A 3 LEU A 309 LYS A 314 -1 O ARG A 312 N GLU A 83 SHEET 3 A 3 LEU A 322 VAL A 326 -1 O LEU A 322 N THR A 313 SHEET 1 B 8 ILE A 88 GLU A 90 0 SHEET 2 B 8 VAL A 420 VAL A 424 1 O VAL A 424 N PHE A 89 SHEET 3 B 8 MET A 294 ILE A 299 1 N CYS A 298 O THR A 423 SHEET 4 B 8 GLY A 357 LYS A 365 -1 O VAL A 363 N ASN A 295 SHEET 5 B 8 SER A 265 ILE A 269 -1 N PHE A 268 O LEU A 362 SHEET 6 B 8 THR A 115 VAL A 120 1 N VAL A 116 O SER A 265 SHEET 7 B 8 PHE A 165 SER A 170 1 O VAL A 166 N LEU A 119 SHEET 8 B 8 LEU A 191 GLN A 196 1 O GLN A 196 N THR A 169 SHEET 1 C 2 GLN A 198 PHE A 200 0 SHEET 2 C 2 ARG A 219 PRO A 221 -1 O LYS A 220 N VAL A 199 SHEET 1 D 2 PHE A 383 ILE A 384 0 SHEET 2 D 2 ILE A 402 GLU A 403 -1 O GLU A 403 N PHE A 383 SHEET 1 E 2 VAL A 483 VAL A 485 0 SHEET 2 E 2 PHE A 490 VAL A 492 -1 O PHE A 490 N VAL A 485 SHEET 1 F 4 ILE A 497 LEU A 500 0 SHEET 2 F 4 THR A 530 GLU A 534 1 O LEU A 531 N ILE A 497 SHEET 3 F 4 ALA A 547 ARG A 551 1 O LEU A 548 N ILE A 532 SHEET 4 F 4 ALA A 606 MET A 608 1 O ALA A 606 N THR A 549 SHEET 1 G 3 VAL A 523 ILE A 525 0 SHEET 2 G 3 LEU A 542 TYR A 545 1 O LEU A 542 N HIS A 524 SHEET 3 G 3 ALA A 566 ARG A 569 1 O VAL A 568 N GLU A 543 SHEET 1 H 2 VAL A 537 ILE A 539 0 SHEET 2 H 2 HIS A 561 VAL A 563 1 O VAL A 563 N ILE A 538 SHEET 1 I 2 SER A 574 ALA A 577 0 SHEET 2 I 2 PHE A 598 LYS A 601 -1 O LYS A 601 N SER A 574 CISPEP 1 PHE A 495 PRO A 496 0 -4.52 SITE 1 AC1 22 VAL A 120 ALA A 121 GLY A 122 GLY A 123 SITE 2 AC1 22 MET A 168 GLN A 196 PRO A 221 GLY A 223 SITE 3 AC1 22 HIS A 224 GLN A 270 ASP A 271 ILE A 307 SITE 4 AC1 22 ASN A 325 SER A 358 VAL A 359 ASN A 360 SITE 5 AC1 22 GLN A 407 TYR A 430 LYS A 434 HOH A 764 SITE 6 AC1 22 HOH A 766 HOH A 829 SITE 1 AC2 3 GLN A 156 LYS A 161 HOH A 680 SITE 1 AC3 5 SER A 478 SER A 479 GLN A 480 LYS A 601 SITE 2 AC3 5 THR A 603 CRYST1 108.226 122.320 61.221 90.00 105.42 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009240 0.000000 0.002549 0.00000 SCALE2 0.000000 0.008175 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016944 0.00000