HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 19-AUG-10 3OIG TITLE CRYSTAL STRUCTURE OF ENOYL-ACP REDUCTASES I (FABI) FROM B. SUBTILIS TITLE 2 (COMPLEX WITH NAD AND INH) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENOYL-ACP REDUCTASES I, FABI, NADH-DEPENDENT ENOYL-ACP COMPND 5 REDUCTASE, COLD SHOCK-INDUCED PROTEIN 15, CSI15, VEGETATIVE PROTEIN COMPND 6 241, VEG241; COMPND 7 EC: 1.3.1.9; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: FABI; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS FATTY ACID SYNTHESIS, ROSSMANN-LIKE FOLD, ENOYL-ACP REDUCTASES, NADH KEYWDS 2 BINDING, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.-H.KIM,B.H.HA,S.J.KIM,S.K.HONG,K.Y.HWANG,E.E.KIM REVDAT 3 01-NOV-23 3OIG 1 REMARK SEQADV REVDAT 2 16-FEB-11 3OIG 1 JRNL REVDAT 1 05-JAN-11 3OIG 0 JRNL AUTH K.-H.KIM,B.H.HA,S.J.KIM,S.K.HONG,K.Y.HWANG,E.E.KIM JRNL TITL CRYSTAL STRUCTURES OF ENOYL-ACP REDUCTASES I (FABI) AND III JRNL TITL 2 (FABL) FROM B. SUBTILIS JRNL REF J.MOL.BIOL. V. 406 403 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21185310 JRNL DOI 10.1016/J.JMB.2010.12.003 REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 64281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3438 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4596 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 242 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1972 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 73 REMARK 3 SOLVENT ATOMS : 265 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.10000 REMARK 3 B33 (A**2) : 0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.045 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.025 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.560 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2082 ; 0.033 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2827 ; 2.461 ; 2.004 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 259 ; 6.472 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 86 ;29.527 ;23.837 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 345 ;12.630 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;15.542 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 325 ; 0.170 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1552 ; 0.016 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1284 ; 1.333 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2059 ; 2.249 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 798 ; 3.438 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 768 ; 5.445 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3OIG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000061156. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 6B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12174 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PROTEUM 300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67984 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.29 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.930 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 3OIF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M DI-AMMONIUM TARTRATE, 22% (W/V) REMARK 280 PEG 3350, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.56300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.00200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.03850 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.56300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.00200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.03850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.56300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.00200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.03850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.56300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 40.00200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.03850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 69.12600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -80.00400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 69.12600 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 176.15400 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -80.00400 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 176.15400 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 414 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 HIS A 266 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 469 O HOH A 534 2.06 REMARK 500 CE MET A 155 O HOH A 530 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 48 CB SER A 48 OG -0.089 REMARK 500 VAL A 85 CB VAL A 85 CG2 -0.187 REMARK 500 TYR A 124 CZ TYR A 124 CE2 -0.106 REMARK 500 GLU A 152 CD GLU A 152 OE2 0.070 REMARK 500 LEU A 153 CA LEU A 153 CB 0.144 REMARK 500 SER A 171 CB SER A 171 OG -0.137 REMARK 500 ARG A 185 CZ ARG A 185 NH1 0.115 REMARK 500 ARG A 185 CZ ARG A 185 NH2 0.125 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 29 CB - CG - CD2 ANGL. DEV. = 12.0 DEGREES REMARK 500 ASP A 67 CB - CG - OD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 THR A 69 OG1 - CB - CG2 ANGL. DEV. = -17.2 DEGREES REMARK 500 ASP A 71 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG A 112 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 TYR A 124 CG - CD2 - CE2 ANGL. DEV. = -5.6 DEGREES REMARK 500 VAL A 129 CA - CB - CG2 ANGL. DEV. = 13.4 DEGREES REMARK 500 ASP A 178 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 178 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG A 185 NE - CZ - NH2 ANGL. DEV. = -6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 59 53.17 -100.93 REMARK 500 CYS A 66 87.58 -154.37 REMARK 500 ASN A 70 -156.76 -124.32 REMARK 500 SER A 123 -58.86 -121.77 REMARK 500 MET A 137 69.93 -100.50 REMARK 500 ASN A 157 -13.27 75.79 REMARK 500 ASN A 159 -130.24 52.21 REMARK 500 ASP A 250 18.32 -147.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMJ A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OIC RELATED DB: PDB REMARK 900 ENOYL-ACP REDUCTASES III, APO-FORM REMARK 900 RELATED ID: 3OID RELATED DB: PDB REMARK 900 ENOYL-ACP REDUCTASES III IN COMPLEX WITH NAD AND TRICLOSAN REMARK 900 RELATED ID: 3OIF RELATED DB: PDB REMARK 900 ENOYL-ACP REDUCTASES I IN COMPLEX WITH NAD AND TRICLOSAN DBREF 3OIG A 1 258 UNP P54616 FABI_BACSU 1 258 SEQADV 3OIG LEU A 259 UNP P54616 EXPRESSION TAG SEQADV 3OIG GLU A 260 UNP P54616 EXPRESSION TAG SEQADV 3OIG HIS A 261 UNP P54616 EXPRESSION TAG SEQADV 3OIG HIS A 262 UNP P54616 EXPRESSION TAG SEQADV 3OIG HIS A 263 UNP P54616 EXPRESSION TAG SEQADV 3OIG HIS A 264 UNP P54616 EXPRESSION TAG SEQADV 3OIG HIS A 265 UNP P54616 EXPRESSION TAG SEQADV 3OIG HIS A 266 UNP P54616 EXPRESSION TAG SEQRES 1 A 266 MET ASN PHE SER LEU GLU GLY ARG ASN ILE VAL VAL MET SEQRES 2 A 266 GLY VAL ALA ASN LYS ARG SER ILE ALA TRP GLY ILE ALA SEQRES 3 A 266 ARG SER LEU HIS GLU ALA GLY ALA ARG LEU ILE PHE THR SEQRES 4 A 266 TYR ALA GLY GLU ARG LEU GLU LYS SER VAL HIS GLU LEU SEQRES 5 A 266 ALA GLY THR LEU ASP ARG ASN ASP SER ILE ILE LEU PRO SEQRES 6 A 266 CYS ASP VAL THR ASN ASP ALA GLU ILE GLU THR CYS PHE SEQRES 7 A 266 ALA SER ILE LYS GLU GLN VAL GLY VAL ILE HIS GLY ILE SEQRES 8 A 266 ALA HIS CYS ILE ALA PHE ALA ASN LYS GLU GLU LEU VAL SEQRES 9 A 266 GLY GLU TYR LEU ASN THR ASN ARG ASP GLY PHE LEU LEU SEQRES 10 A 266 ALA HIS ASN ILE SER SER TYR SER LEU THR ALA VAL VAL SEQRES 11 A 266 LYS ALA ALA ARG PRO MET MET THR GLU GLY GLY SER ILE SEQRES 12 A 266 VAL THR LEU THR TYR LEU GLY GLY GLU LEU VAL MET PRO SEQRES 13 A 266 ASN TYR ASN VAL MET GLY VAL ALA LYS ALA SER LEU ASP SEQRES 14 A 266 ALA SER VAL LYS TYR LEU ALA ALA ASP LEU GLY LYS GLU SEQRES 15 A 266 ASN ILE ARG VAL ASN SER ILE SER ALA GLY PRO ILE ARG SEQRES 16 A 266 THR LEU SER ALA LYS GLY ILE SER ASP PHE ASN SER ILE SEQRES 17 A 266 LEU LYS ASP ILE GLU GLU ARG ALA PRO LEU ARG ARG THR SEQRES 18 A 266 THR THR PRO GLU GLU VAL GLY ASP THR ALA ALA PHE LEU SEQRES 19 A 266 PHE SER ASP MET SER ARG GLY ILE THR GLY GLU ASN LEU SEQRES 20 A 266 HIS VAL ASP SER GLY PHE HIS ILE THR ALA ARG LEU GLU SEQRES 21 A 266 HIS HIS HIS HIS HIS HIS HET NAD A1501 44 HET IMJ A 301 29 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM IMJ (2E)-N-[(1,2-DIMETHYL-1H-INDOL-3-YL)METHYL]-N-METHYL-3- HETNAM 2 IMJ (7-OXO-5,6,7,8-TETRAHYDRO-1,8-NAPHTHYRIDIN-3-YL)PROP- HETNAM 3 IMJ 2-ENAMIDE FORMUL 2 NAD C21 H27 N7 O14 P2 FORMUL 3 IMJ C23 H24 N4 O2 FORMUL 4 HOH *265(H2 O) HELIX 1 1 SER A 20 ALA A 32 1 13 HELIX 2 2 GLY A 42 ARG A 44 5 3 HELIX 3 3 LEU A 45 THR A 55 1 11 HELIX 4 4 ASP A 71 GLY A 86 1 16 HELIX 5 5 ASN A 99 VAL A 104 5 6 HELIX 6 6 GLU A 106 THR A 110 5 5 HELIX 7 7 ASN A 111 SER A 123 1 13 HELIX 8 8 SER A 123 ARG A 134 1 12 HELIX 9 9 PRO A 135 MET A 137 5 3 HELIX 10 10 TYR A 148 GLU A 152 5 5 HELIX 11 11 TYR A 158 GLY A 180 1 23 HELIX 12 12 THR A 196 LYS A 200 5 5 HELIX 13 13 ASP A 204 ALA A 216 1 13 HELIX 14 14 THR A 223 SER A 236 1 14 HELIX 15 15 ASP A 237 ARG A 240 5 4 HELIX 16 16 GLY A 252 THR A 256 5 5 SHEET 1 A 7 ILE A 62 PRO A 65 0 SHEET 2 A 7 ARG A 35 TYR A 40 1 N PHE A 38 O ILE A 62 SHEET 3 A 7 ASN A 9 MET A 13 1 N VAL A 12 O ILE A 37 SHEET 4 A 7 GLY A 90 HIS A 93 1 O ALA A 92 N VAL A 11 SHEET 5 A 7 GLY A 141 THR A 147 1 O VAL A 144 N HIS A 93 SHEET 6 A 7 ILE A 184 ALA A 191 1 O ILE A 189 N THR A 147 SHEET 7 A 7 ASN A 246 VAL A 249 1 O LEU A 247 N SER A 188 SITE 1 AC1 31 GLY A 14 VAL A 15 ALA A 16 SER A 20 SITE 2 AC1 31 ILE A 21 ALA A 41 CYS A 66 ASP A 67 SITE 3 AC1 31 VAL A 68 THR A 69 CYS A 94 ILE A 95 SITE 4 AC1 31 ALA A 96 LEU A 146 THR A 147 LYS A 165 SITE 5 AC1 31 ALA A 191 GLY A 192 PRO A 193 ILE A 194 SITE 6 AC1 31 THR A 196 LEU A 197 SER A 198 HOH A 271 SITE 7 AC1 31 HOH A 274 HOH A 276 HOH A 282 IMJ A 301 SITE 8 AC1 31 HOH A 487 HOH A 500 HOH A 501 SITE 1 AC2 10 PHE A 97 ALA A 98 TYR A 148 ASN A 157 SITE 2 AC2 10 TYR A 158 SER A 198 ILE A 202 HOH A 299 SITE 3 AC2 10 HOH A 384 NAD A1501 CRYST1 69.126 80.004 88.077 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014466 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012499 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011354 0.00000