HEADER TRANSCRIPTION/TRANSFERASE/DNA 03-SEP-10 3OQO TITLE CCPA-HPR-SER46P-SYN CRE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATABOLITE CONTROL PROTEIN A; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: GLUCOSE-RESISTANCE AMYLASE REGULATOR; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PHOSPHOCARRIER PROTEIN HPR; COMPND 8 CHAIN: S, D; COMPND 9 SYNONYM: HISTIDINE-CONTAINING PROTEIN; COMPND 10 EC: 2.7.11.-; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 5'-D(*CP*TP*GP*TP*TP*AP*GP*CP*GP*CP*TP*TP*TP*CP*AP*G)-3'; COMPND 14 CHAIN: E; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: 5'-D(*CP*TP*GP*AP*AP*AP*GP*CP*GP*CP*TP*AP*AP*CP*AP*G)-3'; COMPND 18 CHAIN: B; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: ALSA, AMYR, BSU29740, CCPA, GRAR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 9 ORGANISM_TAXID: 1423; SOURCE 10 GENE: BSU13900, HPR, PTSH; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 16 ORGANISM_TAXID: 1423; SOURCE 17 MOL_ID: 4; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 20 ORGANISM_TAXID: 1423 KEYWDS PBP FOLD FOR CCPA, TRANSCRIPTION, HPR-SER46P, CRE DNA, NUCLEOID, KEYWDS 2 TRANSCRIPTION-TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SCHUMACHER,M.SPREHE,M.BARTHOLOMAE,W.HILLEN,R.G.BRENNAN REVDAT 2 09-APR-14 3OQO 1 JRNL REVDAT 1 26-OCT-11 3OQO 0 JRNL AUTH M.A.SCHUMACHER,M.SPREHE,M.BARTHOLOMAE,W.HILLEN,R.G.BRENNAN JRNL TITL STRUCTURES OF CARBON CATABOLITE PROTEIN A-(HPR-SER46-P) JRNL TITL 2 BOUND TO DIVERSE CATABOLITE RESPONSE ELEMENT SITES REVEAL JRNL TITL 3 THE BASIS FOR HIGH-AFFINITY BINDING TO DEGENERATE DNA JRNL TITL 4 OPERATORS. JRNL REF NUCLEIC ACIDS RES. V. 39 2931 2011 JRNL REFN ISSN 0305-1048 JRNL PMID 21106498 JRNL DOI 10.1093/NAR/GKQ1177 REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1865585.120 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 28497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1959 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.15 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3978 REMARK 3 BIN R VALUE (WORKING SET) : 0.3440 REMARK 3 BIN FREE R VALUE : 0.3910 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 302 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.023 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6437 REMARK 3 NUCLEIC ACID ATOMS : 650 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 250.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 86.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.84000 REMARK 3 B22 (A**2) : -2.00000 REMARK 3 B33 (A**2) : 11.85000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM SIGMAA (A) : 0.56 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.62 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.800 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.940 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.600 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 5.710 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 5.760 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 8.260 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 55.40 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP-NEWSEP.PARAM.TXT REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN-NEWSEP.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3OQO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-10. REMARK 100 THE RCSB ID CODE IS RCSB061452. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28585 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.970 REMARK 200 RESOLUTION RANGE LOW (A) : 105.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.07500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.86500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.60500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.86500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.07500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.60500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -138.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, S, E, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 335 REMARK 465 HIS A 336 REMARK 465 HIS A 337 REMARK 465 HIS A 338 REMARK 465 HIS A 339 REMARK 465 HIS A 340 REMARK 465 ALA C 334 REMARK 465 HIS C 335 REMARK 465 HIS C 336 REMARK 465 HIS C 337 REMARK 465 HIS C 338 REMARK 465 HIS C 339 REMARK 465 HIS C 340 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 4 89.90 32.50 REMARK 500 ASN A 29 73.04 -56.51 REMARK 500 VAL A 30 111.42 -166.15 REMARK 500 GLN A 101 9.67 57.24 REMARK 500 GLU A 106 -74.69 -58.40 REMARK 500 ARG A 138 48.94 -100.19 REMARK 500 GLU A 153 60.41 35.19 REMARK 500 ALA A 159 -168.95 -177.95 REMARK 500 ASP A 175 18.23 -61.73 REMARK 500 LYS A 196 -74.53 -107.06 REMARK 500 ASP A 221 39.48 -140.09 REMARK 500 TYR A 222 -10.62 65.46 REMARK 500 ILE A 256 -72.00 -45.08 REMARK 500 GLN A 262 31.90 -80.59 REMARK 500 ASP A 276 -49.17 118.14 REMARK 500 ASN A 277 42.80 72.98 REMARK 500 GLU A 317 109.01 66.32 REMARK 500 ARG A 329 -139.77 -121.83 REMARK 500 GLN S 3 159.34 176.57 REMARK 500 LYS S 4 139.81 168.21 REMARK 500 ALA S 16 -154.72 53.93 REMARK 500 ASN S 38 78.43 -6.76 REMARK 500 ALA S 68 -79.15 -59.54 REMARK 500 ASP S 69 9.71 -64.96 REMARK 500 ALA S 73 -70.36 -68.80 REMARK 500 MET S 81 -33.62 -39.80 REMARK 500 LEU S 86 -66.50 -95.89 REMARK 500 ASN C 3 179.58 -54.78 REMARK 500 GLU C 12 19.76 -63.32 REMARK 500 ALA C 13 1.53 -158.44 REMARK 500 ASN C 29 62.99 -65.15 REMARK 500 ASP C 70 97.22 -161.00 REMARK 500 ILE C 71 -6.87 -56.38 REMARK 500 LYS C 116 5.08 -69.39 REMARK 500 GLU C 154 -43.19 -130.84 REMARK 500 VAL C 158 86.21 -155.05 REMARK 500 ALA C 159 -144.78 -133.88 REMARK 500 ASP C 175 -1.55 -59.39 REMARK 500 ILE C 192 -33.38 -38.33 REMARK 500 ARG C 194 -71.74 -63.31 REMARK 500 SER C 195 24.84 -75.86 REMARK 500 LYS C 196 -59.45 -153.85 REMARK 500 GLN C 215 3.86 -69.14 REMARK 500 ASP C 221 44.47 -157.57 REMARK 500 TYR C 222 7.98 55.82 REMARK 500 SER C 236 -80.50 -55.74 REMARK 500 LEU C 237 163.71 -48.22 REMARK 500 LYS C 239 90.44 -63.37 REMARK 500 LEU C 264 146.33 -39.90 REMARK 500 ASP C 276 -33.52 157.18 REMARK 500 REMARK 500 THIS ENTRY HAS 68 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DC B 700 0.07 SIDE CHAIN REMARK 500 DC B 713 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 342 DISTANCE = 5.11 ANGSTROMS REMARK 525 HOH A 347 DISTANCE = 5.57 ANGSTROMS REMARK 525 HOH A 352 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH A 361 DISTANCE = 5.57 ANGSTROMS REMARK 525 HOH C 345 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH S 135 DISTANCE = 5.01 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 499 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 399 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 599 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 699 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 999 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OQM RELATED DB: PDB REMARK 900 CCPA-HPRSER46P-ACKA2 CRE REMARK 900 RELATED ID: 3OQN RELATED DB: PDB REMARK 900 CCPA-HPRSER46P-GNTR-DOWN CRE DBREF 3OQO A 2 334 UNP P25144 CCPA_BACSU 1 333 DBREF 3OQO S 2 88 UNP P08877 PTHP_BACSU 2 88 DBREF 3OQO C 2 334 UNP P25144 CCPA_BACSU 1 333 DBREF 3OQO D 2 88 UNP P08877 PTHP_BACSU 2 88 DBREF 3OQO E 700 715 PDB 3OQO 3OQO 700 715 DBREF 3OQO B 700 715 PDB 3OQO 3OQO 700 715 SEQADV 3OQO HIS A 335 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS A 336 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS A 337 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS A 338 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS A 339 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS A 340 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS C 335 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS C 336 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS C 337 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS C 338 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS C 339 UNP P25144 EXPRESSION TAG SEQADV 3OQO HIS C 340 UNP P25144 EXPRESSION TAG SEQRES 1 A 339 MET ASN ILE THR ILE TYR ASP VAL ALA ARG GLU ALA ASN SEQRES 2 A 339 VAL SER MET ALA THR VAL SER ARG VAL VAL ASN GLY ASN SEQRES 3 A 339 PRO ASN VAL LYS PRO THR THR ARG LYS LYS VAL LEU GLU SEQRES 4 A 339 ALA ILE GLU ARG LEU GLY TYR ARG PRO ASN ALA VAL ALA SEQRES 5 A 339 ARG GLY LEU ALA SER LYS LYS THR THR THR VAL GLY VAL SEQRES 6 A 339 ILE ILE PRO ASP ILE SER SER ILE PHE TYR SER GLU LEU SEQRES 7 A 339 ALA ARG GLY ILE GLU ASP ILE ALA THR MET TYR LYS TYR SEQRES 8 A 339 ASN ILE ILE LEU SER ASN SER ASP GLN ASN MET GLU LYS SEQRES 9 A 339 GLU LEU HIS LEU LEU ASN THR MET LEU GLY LYS GLN VAL SEQRES 10 A 339 ASP GLY ILE VAL PHE MET GLY GLY ASN ILE THR ASP GLU SEQRES 11 A 339 HIS VAL ALA GLU PHE LYS ARG SER PRO VAL PRO ILE VAL SEQRES 12 A 339 LEU ALA ALA SER VAL GLU GLU GLN GLU GLU THR PRO SER SEQRES 13 A 339 VAL ALA ILE ASP TYR GLU GLN ALA ILE TYR ASP ALA VAL SEQRES 14 A 339 LYS LEU LEU VAL ASP LYS GLY HIS THR ASP ILE ALA PHE SEQRES 15 A 339 VAL SER GLY PRO MET ALA GLU PRO ILE ASN ARG SER LYS SEQRES 16 A 339 LYS LEU GLN GLY TYR LYS ARG ALA LEU GLU GLU ALA ASN SEQRES 17 A 339 LEU PRO PHE ASN GLU GLN PHE VAL ALA GLU GLY ASP TYR SEQRES 18 A 339 THR TYR ASP SER GLY LEU GLU ALA LEU GLN HIS LEU MET SEQRES 19 A 339 SER LEU ASP LYS LYS PRO THR ALA ILE LEU SER ALA THR SEQRES 20 A 339 ASP GLU MET ALA LEU GLY ILE ILE HIS ALA ALA GLN ASP SEQRES 21 A 339 GLN GLY LEU SER ILE PRO GLU ASP LEU ASP ILE ILE GLY SEQRES 22 A 339 PHE ASP ASN THR ARG LEU SER LEU MET VAL ARG PRO GLN SEQRES 23 A 339 LEU SER THR VAL VAL GLN PRO THR TYR ASP ILE GLY ALA SEQRES 24 A 339 VAL ALA MET ARG LEU LEU THR LYS LEU MET ASN LYS GLU SEQRES 25 A 339 PRO VAL GLU GLU HIS ILE VAL GLU LEU PRO HIS ARG ILE SEQRES 26 A 339 GLU LEU ARG LYS SER THR LYS ALA HIS HIS HIS HIS HIS SEQRES 27 A 339 HIS SEQRES 1 S 87 ALA GLN LYS THR PHE LYS VAL THR ALA ASP SER GLY ILE SEQRES 2 S 87 HIS ALA ARG PRO ALA THR VAL LEU VAL GLN THR ALA SER SEQRES 3 S 87 LYS TYR ASP ALA ASP VAL ASN LEU GLU TYR ASN GLY LYS SEQRES 4 S 87 THR VAL ASN LEU LYS SEP ILE MET GLY VAL MET SER LEU SEQRES 5 S 87 GLY ILE ALA LYS GLY ALA GLU ILE THR ILE SER ALA SER SEQRES 6 S 87 GLY ALA ASP GLU ASN ASP ALA LEU ASN ALA LEU GLU GLU SEQRES 7 S 87 THR MET LYS SER GLU GLY LEU GLY GLU SEQRES 1 C 339 MET ASN ILE THR ILE TYR ASP VAL ALA ARG GLU ALA ASN SEQRES 2 C 339 VAL SER MET ALA THR VAL SER ARG VAL VAL ASN GLY ASN SEQRES 3 C 339 PRO ASN VAL LYS PRO THR THR ARG LYS LYS VAL LEU GLU SEQRES 4 C 339 ALA ILE GLU ARG LEU GLY TYR ARG PRO ASN ALA VAL ALA SEQRES 5 C 339 ARG GLY LEU ALA SER LYS LYS THR THR THR VAL GLY VAL SEQRES 6 C 339 ILE ILE PRO ASP ILE SER SER ILE PHE TYR SER GLU LEU SEQRES 7 C 339 ALA ARG GLY ILE GLU ASP ILE ALA THR MET TYR LYS TYR SEQRES 8 C 339 ASN ILE ILE LEU SER ASN SER ASP GLN ASN MET GLU LYS SEQRES 9 C 339 GLU LEU HIS LEU LEU ASN THR MET LEU GLY LYS GLN VAL SEQRES 10 C 339 ASP GLY ILE VAL PHE MET GLY GLY ASN ILE THR ASP GLU SEQRES 11 C 339 HIS VAL ALA GLU PHE LYS ARG SER PRO VAL PRO ILE VAL SEQRES 12 C 339 LEU ALA ALA SER VAL GLU GLU GLN GLU GLU THR PRO SER SEQRES 13 C 339 VAL ALA ILE ASP TYR GLU GLN ALA ILE TYR ASP ALA VAL SEQRES 14 C 339 LYS LEU LEU VAL ASP LYS GLY HIS THR ASP ILE ALA PHE SEQRES 15 C 339 VAL SER GLY PRO MET ALA GLU PRO ILE ASN ARG SER LYS SEQRES 16 C 339 LYS LEU GLN GLY TYR LYS ARG ALA LEU GLU GLU ALA ASN SEQRES 17 C 339 LEU PRO PHE ASN GLU GLN PHE VAL ALA GLU GLY ASP TYR SEQRES 18 C 339 THR TYR ASP SER GLY LEU GLU ALA LEU GLN HIS LEU MET SEQRES 19 C 339 SER LEU ASP LYS LYS PRO THR ALA ILE LEU SER ALA THR SEQRES 20 C 339 ASP GLU MET ALA LEU GLY ILE ILE HIS ALA ALA GLN ASP SEQRES 21 C 339 GLN GLY LEU SER ILE PRO GLU ASP LEU ASP ILE ILE GLY SEQRES 22 C 339 PHE ASP ASN THR ARG LEU SER LEU MET VAL ARG PRO GLN SEQRES 23 C 339 LEU SER THR VAL VAL GLN PRO THR TYR ASP ILE GLY ALA SEQRES 24 C 339 VAL ALA MET ARG LEU LEU THR LYS LEU MET ASN LYS GLU SEQRES 25 C 339 PRO VAL GLU GLU HIS ILE VAL GLU LEU PRO HIS ARG ILE SEQRES 26 C 339 GLU LEU ARG LYS SER THR LYS ALA HIS HIS HIS HIS HIS SEQRES 27 C 339 HIS SEQRES 1 D 87 ALA GLN LYS THR PHE LYS VAL THR ALA ASP SER GLY ILE SEQRES 2 D 87 HIS ALA ARG PRO ALA THR VAL LEU VAL GLN THR ALA SER SEQRES 3 D 87 LYS TYR ASP ALA ASP VAL ASN LEU GLU TYR ASN GLY LYS SEQRES 4 D 87 THR VAL ASN LEU LYS SEP ILE MET GLY VAL MET SER LEU SEQRES 5 D 87 GLY ILE ALA LYS GLY ALA GLU ILE THR ILE SER ALA SER SEQRES 6 D 87 GLY ALA ASP GLU ASN ASP ALA LEU ASN ALA LEU GLU GLU SEQRES 7 D 87 THR MET LYS SER GLU GLY LEU GLY GLU SEQRES 1 E 16 DC DT DG DT DT DA DG DC DG DC DT DT DT SEQRES 2 E 16 DC DA DG SEQRES 1 B 16 DC DT DG DA DA DA DG DC DG DC DT DA DA SEQRES 2 B 16 DC DA DG MODRES 3OQO SEP S 46 SER PHOSPHOSERINE MODRES 3OQO SEP D 46 SER PHOSPHOSERINE HET SEP S 46 10 HET SEP D 46 10 HET SO4 A 499 5 HET SO4 A 399 5 HET SO4 C 599 5 HET SO4 C 699 5 HET SO4 C 999 5 HETNAM SEP PHOSPHOSERINE HETNAM SO4 SULFATE ION HETSYN SEP PHOSPHONOSERINE FORMUL 2 SEP 2(C3 H8 N O6 P) FORMUL 7 SO4 5(O4 S 2-) FORMUL 12 HOH *48(H2 O) HELIX 1 1 THR A 5 ALA A 13 1 9 HELIX 2 2 SER A 16 ASN A 25 1 10 HELIX 3 3 LYS A 31 GLY A 46 1 16 HELIX 4 4 ASN A 50 LYS A 59 1 10 HELIX 5 5 SER A 73 TYR A 90 1 18 HELIX 6 6 ASN A 102 LYS A 116 1 15 HELIX 7 7 THR A 129 ARG A 138 1 10 HELIX 8 8 ASP A 161 ASP A 175 1 15 HELIX 9 9 GLU A 190 SER A 195 1 6 HELIX 10 10 LYS A 196 ALA A 208 1 13 HELIX 11 11 ASN A 213 GLN A 215 5 3 HELIX 12 12 THR A 223 MET A 235 1 13 HELIX 13 13 THR A 248 GLN A 262 1 15 HELIX 14 14 THR A 278 VAL A 284 5 7 HELIX 15 15 PRO A 294 ASN A 311 1 18 HELIX 16 16 HIS S 15 LYS S 28 1 14 HELIX 17 17 SEP S 46 SER S 52 1 7 HELIX 18 18 ASP S 69 GLU S 84 1 16 HELIX 19 19 THR C 5 GLU C 12 1 8 HELIX 20 20 SER C 16 ASN C 25 1 10 HELIX 21 21 LYS C 31 GLY C 46 1 16 HELIX 22 22 ASN C 50 LYS C 59 1 10 HELIX 23 23 SER C 73 TYR C 90 1 18 HELIX 24 24 ASN C 102 LYS C 116 1 15 HELIX 25 25 THR C 129 LYS C 137 1 9 HELIX 26 26 ASP C 161 ASP C 175 1 15 HELIX 27 27 GLU C 190 SER C 195 1 6 HELIX 28 28 LYS C 196 GLU C 207 1 12 HELIX 29 29 ASN C 213 GLN C 215 5 3 HELIX 30 30 THR C 223 LEU C 237 1 15 HELIX 31 31 THR C 248 ASP C 261 1 14 HELIX 32 32 THR C 278 MET C 283 5 6 HELIX 33 33 PRO C 294 ASN C 311 1 18 HELIX 34 34 HIS D 15 ALA D 26 1 12 HELIX 35 35 SEP D 46 GLY D 54 1 9 HELIX 36 36 ASP D 69 GLU D 84 1 16 SHEET 1 A12 ILE A 319 GLU A 321 0 SHEET 2 A12 SER A 157 ALA A 159 1 N SER A 157 O VAL A 320 SHEET 3 A12 ILE A 143 ALA A 146 1 N LEU A 145 O VAL A 158 SHEET 4 A12 GLY A 120 PHE A 123 1 N PHE A 123 O VAL A 144 SHEET 5 A12 THR A 63 ILE A 68 1 N GLY A 65 O GLY A 120 SHEET 6 A12 ASN A 93 ASN A 98 1 O ILE A 95 N VAL A 66 SHEET 7 A12 ASN C 93 ASN C 98 -1 O ILE C 94 N LEU A 96 SHEET 8 A12 THR C 63 ILE C 68 1 N VAL C 64 O ASN C 93 SHEET 9 A12 GLY C 120 PHE C 123 1 O GLY C 120 N GLY C 65 SHEET 10 A12 ILE C 143 ALA C 146 1 O VAL C 144 N PHE C 123 SHEET 11 A12 SER C 157 ALA C 159 1 O VAL C 158 N LEU C 145 SHEET 12 A12 VAL C 320 GLU C 321 1 O VAL C 320 N SER C 157 SHEET 1 B 6 VAL A 217 GLU A 219 0 SHEET 2 B 6 ILE A 181 SER A 185 1 N SER A 185 O ALA A 218 SHEET 3 B 6 ALA A 243 SER A 246 1 O LEU A 245 N ALA A 182 SHEET 4 B 6 ASP A 271 ASP A 276 1 O ASP A 271 N ILE A 244 SHEET 5 B 6 SER A 289 VAL A 292 1 O SER A 289 N GLY A 274 SHEET 6 B 6 ARG A 325 GLU A 327 -1 O ARG A 325 N VAL A 292 SHEET 1 C 4 THR S 5 LYS S 7 0 SHEET 2 C 4 GLU S 60 SER S 66 -1 O ILE S 61 N PHE S 6 SHEET 3 C 4 ASP S 32 TYR S 37 -1 N GLU S 36 O THR S 62 SHEET 4 C 4 THR S 41 VAL S 42 -1 O VAL S 42 N LEU S 35 SHEET 1 D 6 VAL C 217 GLU C 219 0 SHEET 2 D 6 ILE C 181 SER C 185 1 N PHE C 183 O ALA C 218 SHEET 3 D 6 ALA C 243 SER C 246 1 O LEU C 245 N VAL C 184 SHEET 4 D 6 ASP C 271 ASP C 276 1 O ASP C 271 N ILE C 244 SHEET 5 D 6 SER C 289 VAL C 292 1 O SER C 289 N GLY C 274 SHEET 6 D 6 ARG C 325 GLU C 327 -1 O ARG C 325 N VAL C 292 SHEET 1 E 4 THR D 5 LYS D 7 0 SHEET 2 E 4 GLU D 60 ILE D 63 -1 O ILE D 61 N PHE D 6 SHEET 3 E 4 ASN D 34 TYR D 37 -1 N GLU D 36 O THR D 62 SHEET 4 E 4 LYS D 40 ASN D 43 -1 O LYS D 40 N TYR D 37 LINK C LYS S 45 N SEP S 46 1555 1555 1.33 LINK C SEP S 46 N ILE S 47 1555 1555 1.33 LINK C LYS D 45 N SEP D 46 1555 1555 1.33 LINK C SEP D 46 N ILE D 47 1555 1555 1.33 CISPEP 1 ILE A 266 PRO A 267 0 -0.03 CISPEP 2 ARG A 285 PRO A 286 0 0.27 CISPEP 3 ILE C 266 PRO C 267 0 -0.42 CISPEP 4 ARG C 285 PRO C 286 0 -0.02 SITE 1 AC1 4 TYR A 90 ARG A 304 ASN A 311 GLU A 313 SITE 1 AC2 1 TYR A 90 SITE 1 AC3 5 TYR C 90 ARG C 304 THR C 307 ASN C 311 SITE 2 AC3 5 GLU C 313 SITE 1 AC4 1 MET C 89 SITE 1 AC5 2 ASP C 85 ARG D 17 CRYST1 74.150 105.210 173.730 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013486 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009505 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005756 0.00000