data_3OT6 # _entry.id 3OT6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3OT6 RCSB RCSB061541 WWPDB D_1000061541 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC61708 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3OT6 _pdbx_database_status.recvd_initial_deposition_date 2010-09-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joachimiak, A.' 1 'Duke, N.E.C.' 2 'Stein, A.' 3 'Chhor, G.' 4 'Freeman, L.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Crystal Structure of an enoyl-CoA hydratase/isomerase family protein from Psudomonas syringae' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Joachimiak, A.' 1 primary 'Duke, N.E.C.' 2 primary 'Stein, A.' 3 primary 'Chhor, G.' 4 primary 'Freeman, L.' 5 # _cell.entry_id 3OT6 _cell.length_a 162.517 _cell.length_b 162.517 _cell.length_c 162.517 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3OT6 _symmetry.space_group_name_H-M 'I 41 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 214 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Enoyl-CoA hydratase/isomerase family protein' 25090.584 1 ? ? ? ? 2 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 3 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 1 ? ? ? ? 4 water nat water 18.015 82 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)SDLVSYHLDDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKDRAIVIVTGQPGILSGGYDLKV(MSE)TSS AEAAINLVAQGSTLARR(MSE)LSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIG(MSE)T(MSE)H HAGIELARDRLRKSAFNRSVINAE(MSE)FDPEGA(MSE)AAGFLDKVVSVEELQGAALAVAAQLKKIN(MSE)NAHKKT KLKVRKGLLDTLDAAIEQDRQH(MSE)L ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMSDLVSYHLDDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKDRAIVIVTGQPGILSGGYDLKVMTSSAEAAINLV AQGSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSV INAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHKKTKLKVRKGLLDTLDAAIEQDRQHML ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC61708 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 SER n 1 6 ASP n 1 7 LEU n 1 8 VAL n 1 9 SER n 1 10 TYR n 1 11 HIS n 1 12 LEU n 1 13 ASP n 1 14 ASP n 1 15 GLY n 1 16 VAL n 1 17 ALA n 1 18 THR n 1 19 LEU n 1 20 THR n 1 21 LEU n 1 22 ASN n 1 23 ASN n 1 24 GLY n 1 25 LYS n 1 26 VAL n 1 27 ASN n 1 28 ALA n 1 29 ILE n 1 30 SER n 1 31 PRO n 1 32 ASP n 1 33 VAL n 1 34 ILE n 1 35 ILE n 1 36 ALA n 1 37 PHE n 1 38 ASN n 1 39 ALA n 1 40 ALA n 1 41 LEU n 1 42 ASP n 1 43 GLN n 1 44 ALA n 1 45 GLU n 1 46 LYS n 1 47 ASP n 1 48 ARG n 1 49 ALA n 1 50 ILE n 1 51 VAL n 1 52 ILE n 1 53 VAL n 1 54 THR n 1 55 GLY n 1 56 GLN n 1 57 PRO n 1 58 GLY n 1 59 ILE n 1 60 LEU n 1 61 SER n 1 62 GLY n 1 63 GLY n 1 64 TYR n 1 65 ASP n 1 66 LEU n 1 67 LYS n 1 68 VAL n 1 69 MSE n 1 70 THR n 1 71 SER n 1 72 SER n 1 73 ALA n 1 74 GLU n 1 75 ALA n 1 76 ALA n 1 77 ILE n 1 78 ASN n 1 79 LEU n 1 80 VAL n 1 81 ALA n 1 82 GLN n 1 83 GLY n 1 84 SER n 1 85 THR n 1 86 LEU n 1 87 ALA n 1 88 ARG n 1 89 ARG n 1 90 MSE n 1 91 LEU n 1 92 SER n 1 93 HIS n 1 94 PRO n 1 95 PHE n 1 96 PRO n 1 97 ILE n 1 98 ILE n 1 99 VAL n 1 100 ALA n 1 101 CYS n 1 102 PRO n 1 103 GLY n 1 104 HIS n 1 105 ALA n 1 106 VAL n 1 107 ALA n 1 108 LYS n 1 109 GLY n 1 110 ALA n 1 111 PHE n 1 112 LEU n 1 113 LEU n 1 114 LEU n 1 115 SER n 1 116 ALA n 1 117 ASP n 1 118 TYR n 1 119 ARG n 1 120 ILE n 1 121 GLY n 1 122 VAL n 1 123 ALA n 1 124 GLY n 1 125 PRO n 1 126 PHE n 1 127 SER n 1 128 ILE n 1 129 GLY n 1 130 LEU n 1 131 ASN n 1 132 GLU n 1 133 VAL n 1 134 GLN n 1 135 ILE n 1 136 GLY n 1 137 MSE n 1 138 THR n 1 139 MSE n 1 140 HIS n 1 141 HIS n 1 142 ALA n 1 143 GLY n 1 144 ILE n 1 145 GLU n 1 146 LEU n 1 147 ALA n 1 148 ARG n 1 149 ASP n 1 150 ARG n 1 151 LEU n 1 152 ARG n 1 153 LYS n 1 154 SER n 1 155 ALA n 1 156 PHE n 1 157 ASN n 1 158 ARG n 1 159 SER n 1 160 VAL n 1 161 ILE n 1 162 ASN n 1 163 ALA n 1 164 GLU n 1 165 MSE n 1 166 PHE n 1 167 ASP n 1 168 PRO n 1 169 GLU n 1 170 GLY n 1 171 ALA n 1 172 MSE n 1 173 ALA n 1 174 ALA n 1 175 GLY n 1 176 PHE n 1 177 LEU n 1 178 ASP n 1 179 LYS n 1 180 VAL n 1 181 VAL n 1 182 SER n 1 183 VAL n 1 184 GLU n 1 185 GLU n 1 186 LEU n 1 187 GLN n 1 188 GLY n 1 189 ALA n 1 190 ALA n 1 191 LEU n 1 192 ALA n 1 193 VAL n 1 194 ALA n 1 195 ALA n 1 196 GLN n 1 197 LEU n 1 198 LYS n 1 199 LYS n 1 200 ILE n 1 201 ASN n 1 202 MSE n 1 203 ASN n 1 204 ALA n 1 205 HIS n 1 206 LYS n 1 207 LYS n 1 208 THR n 1 209 LYS n 1 210 LEU n 1 211 LYS n 1 212 VAL n 1 213 ARG n 1 214 LYS n 1 215 GLY n 1 216 LEU n 1 217 LEU n 1 218 ASP n 1 219 THR n 1 220 LEU n 1 221 ASP n 1 222 ALA n 1 223 ALA n 1 224 ILE n 1 225 GLU n 1 226 GLN n 1 227 ASP n 1 228 ARG n 1 229 GLN n 1 230 HIS n 1 231 MSE n 1 232 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PSPTO2065, PSPTO_2065' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas syringae pv. tomato' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 323 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pMCSG7 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q884M3_PSESM _struct_ref.pdbx_db_accession Q884M3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSDLVSYHLDDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKDRAIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQG STLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINA EMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHKKTKLKVRKGLLDTLDAAIEQDRQHML ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3OT6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 232 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q884M3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 229 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 229 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3OT6 SER A 1 ? UNP Q884M3 ? ? 'EXPRESSION TAG' -2 1 1 3OT6 ASN A 2 ? UNP Q884M3 ? ? 'EXPRESSION TAG' -1 2 1 3OT6 ALA A 3 ? UNP Q884M3 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3OT6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.56 _exptl_crystal.density_percent_sol 65.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details ;0.20M ammonium phosphate, 0.10M tris pH 8.5, 50% v/v MPD (2-methyl-1,3 propanediol), 2% v/v dioxane, 0.1mM n-octyl-beta-D-thioglucoside, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-04-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97940 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97940 # _reflns.entry_id 3OT6 _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 114.71 _reflns.d_resolution_high 2.50 _reflns.number_obs 23759 _reflns.number_all ? _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3OT6 _refine.ls_number_reflns_obs 12219 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 114.71 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 98.99 _refine.ls_R_factor_obs 0.18951 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18661 _refine.ls_R_factor_R_free 0.25164 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 626 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.896 _refine.B_iso_mean 28.308 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.247 _refine.overall_SU_ML 0.139 _refine.overall_SU_B 6.216 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.287 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1713 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 1811 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 114.71 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 1750 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.869 1.979 ? 2366 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.152 5.000 ? 229 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.406 24.559 ? 68 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.564 15.000 ? 306 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.138 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.118 0.200 ? 281 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 1277 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.010 1.500 ? 1139 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.987 2.000 ? 1814 'X-RAY DIFFRACTION' ? r_scbond_it 3.813 3.000 ? 611 'X-RAY DIFFRACTION' ? r_scangle_it 6.316 4.500 ? 552 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.501 _refine_ls_shell.d_res_low 2.566 _refine_ls_shell.number_reflns_R_work 768 _refine_ls_shell.R_factor_R_work 0.337 _refine_ls_shell.percent_reflns_obs 87.43 _refine_ls_shell.R_factor_R_free 0.450 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3OT6 _struct.title 'Crystal Structure of an enoyl-CoA hydratase/isomerase family protein from Psudomonas syringae' _struct.pdbx_descriptor 'Enoyl-CoA hydratase/isomerase family protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OT6 _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, ISOMERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 3 ? LEU A 7 ? ALA A 0 LEU A 4 1 ? 5 HELX_P HELX_P2 2 SER A 30 ? ASP A 47 ? SER A 27 ASP A 44 1 ? 18 HELX_P HELX_P3 3 ASP A 65 ? SER A 72 ? ASP A 62 SER A 69 1 ? 8 HELX_P HELX_P4 4 SER A 72 ? SER A 92 ? SER A 69 SER A 89 1 ? 21 HELX_P HELX_P5 5 ALA A 107 ? LEU A 114 ? ALA A 104 LEU A 111 1 ? 8 HELX_P HELX_P6 6 HIS A 140 ? LEU A 151 ? HIS A 137 LEU A 148 1 ? 12 HELX_P HELX_P7 7 ARG A 152 ? ILE A 161 ? ARG A 149 ILE A 158 1 ? 10 HELX_P HELX_P8 8 ASP A 167 ? ALA A 174 ? ASP A 164 ALA A 171 1 ? 8 HELX_P HELX_P9 9 GLU A 185 ? LYS A 198 ? GLU A 182 LYS A 195 1 ? 14 HELX_P HELX_P10 10 ASN A 201 ? MSE A 231 ? ASN A 198 MSE A 228 1 ? 31 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 3 C ? ? ? 1_555 A MSE 4 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.324 ? covale2 covale ? ? A MSE 4 C ? ? ? 1_555 A SER 5 N ? ? A MSE 1 A SER 2 1_555 ? ? ? ? ? ? ? 1.342 ? covale3 covale ? ? A VAL 68 C ? ? ? 1_555 A MSE 69 N ? ? A VAL 65 A MSE 66 1_555 ? ? ? ? ? ? ? 1.336 ? covale4 covale ? ? A MSE 69 C ? ? ? 1_555 A THR 70 N ? ? A MSE 66 A THR 67 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale ? ? A ARG 89 C ? ? ? 1_555 A MSE 90 N ? ? A ARG 86 A MSE 87 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? A MSE 90 C ? ? ? 1_555 A LEU 91 N ? ? A MSE 87 A LEU 88 1_555 ? ? ? ? ? ? ? 1.317 ? covale7 covale ? ? A GLY 136 C ? ? ? 1_555 A MSE 137 N ? ? A GLY 133 A MSE 134 1_555 ? ? ? ? ? ? ? 1.325 ? covale8 covale ? ? A MSE 137 C ? ? ? 1_555 A THR 138 N ? ? A MSE 134 A THR 135 1_555 ? ? ? ? ? ? ? 1.313 ? covale9 covale ? ? A THR 138 C ? ? ? 1_555 A MSE 139 N ? ? A THR 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.335 ? covale10 covale ? ? A MSE 139 C ? ? ? 1_555 A HIS 140 N ? ? A MSE 136 A HIS 137 1_555 ? ? ? ? ? ? ? 1.340 ? covale11 covale ? ? A GLU 164 C ? ? ? 1_555 A MSE 165 N ? ? A GLU 161 A MSE 162 1_555 ? ? ? ? ? ? ? 1.339 ? covale12 covale ? ? A MSE 165 C ? ? ? 1_555 A PHE 166 N ? ? A MSE 162 A PHE 163 1_555 ? ? ? ? ? ? ? 1.336 ? covale13 covale ? ? A ALA 171 C ? ? ? 1_555 A MSE 172 N ? ? A ALA 168 A MSE 169 1_555 ? ? ? ? ? ? ? 1.344 ? covale14 covale ? ? A MSE 172 C ? ? ? 1_555 A ALA 173 N ? ? A MSE 169 A ALA 170 1_555 ? ? ? ? ? ? ? 1.335 ? covale15 covale ? ? A ASN 201 C ? ? ? 1_555 A MSE 202 N ? ? A ASN 198 A MSE 199 1_555 ? ? ? ? ? ? ? 1.329 ? covale16 covale ? ? A MSE 202 C ? ? ? 1_555 A ASN 203 N ? ? A MSE 199 A ASN 200 1_555 ? ? ? ? ? ? ? 1.328 ? covale17 covale ? ? A HIS 230 C ? ? ? 1_555 A MSE 231 N ? ? A HIS 227 A MSE 228 1_555 ? ? ? ? ? ? ? 1.323 ? covale18 covale ? ? A MSE 231 C ? ? ? 1_555 A LEU 232 N ? ? A MSE 228 A LEU 229 1_555 ? ? ? ? ? ? ? 1.323 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 8 ? ASP A 13 ? VAL A 5 ASP A 10 A 2 VAL A 16 ? LEU A 21 ? VAL A 13 LEU A 18 A 3 ILE A 50 ? THR A 54 ? ILE A 47 THR A 51 A 4 ILE A 97 ? ALA A 100 ? ILE A 94 ALA A 97 A 5 TYR A 118 ? VAL A 122 ? TYR A 115 VAL A 119 A 6 LYS A 179 ? VAL A 181 ? LYS A 176 VAL A 178 B 1 GLY A 58 ? SER A 61 ? GLY A 55 SER A 58 B 2 GLY A 103 ? VAL A 106 ? GLY A 100 VAL A 103 B 3 ILE A 128 ? GLY A 129 ? ILE A 125 GLY A 126 B 4 MSE A 165 ? PHE A 166 ? MSE A 162 PHE A 163 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 11 ? N HIS A 8 O THR A 18 ? O THR A 15 A 2 3 N LEU A 19 ? N LEU A 16 O ILE A 52 ? O ILE A 49 A 3 4 N VAL A 53 ? N VAL A 50 O ILE A 98 ? O ILE A 95 A 4 5 N VAL A 99 ? N VAL A 96 O ILE A 120 ? O ILE A 117 A 5 6 N GLY A 121 ? N GLY A 118 O LYS A 179 ? O LYS A 176 B 1 2 N LEU A 60 ? N LEU A 57 O HIS A 104 ? O HIS A 101 B 2 3 N ALA A 105 ? N ALA A 102 O GLY A 129 ? O GLY A 126 B 3 4 N ILE A 128 ? N ILE A 125 O PHE A 166 ? O PHE A 163 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MPD A 301' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE MRD A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 MSE A 4 ? MSE A 1 . ? 1_555 ? 2 AC1 6 SER A 5 ? SER A 2 . ? 1_555 ? 3 AC1 6 VAL A 8 ? VAL A 5 . ? 1_555 ? 4 AC1 6 TYR A 10 ? TYR A 7 . ? 1_555 ? 5 AC1 6 ALA A 36 ? ALA A 33 . ? 1_555 ? 6 AC1 6 ALA A 39 ? ALA A 36 . ? 1_555 ? 7 AC2 7 VAL A 80 ? VAL A 77 . ? 1_555 ? 8 AC2 7 MSE A 137 ? MSE A 134 . ? 1_555 ? 9 AC2 7 THR A 138 ? THR A 135 . ? 1_555 ? 10 AC2 7 HIS A 140 ? HIS A 137 . ? 1_555 ? 11 AC2 7 HOH D . ? HOH A 249 . ? 1_555 ? 12 AC2 7 HOH D . ? HOH A 267 . ? 1_555 ? 13 AC2 7 HOH D . ? HOH A 305 . ? 1_555 ? # _database_PDB_matrix.entry_id 3OT6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3OT6 _atom_sites.fract_transf_matrix[1][1] 0.006153 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006153 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006153 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 SER 5 2 2 SER SER A . n A 1 6 ASP 6 3 3 ASP ASP A . n A 1 7 LEU 7 4 4 LEU LEU A . n A 1 8 VAL 8 5 5 VAL VAL A . n A 1 9 SER 9 6 6 SER SER A . n A 1 10 TYR 10 7 7 TYR TYR A . n A 1 11 HIS 11 8 8 HIS HIS A . n A 1 12 LEU 12 9 9 LEU LEU A . n A 1 13 ASP 13 10 10 ASP ASP A . n A 1 14 ASP 14 11 11 ASP ASP A . n A 1 15 GLY 15 12 12 GLY GLY A . n A 1 16 VAL 16 13 13 VAL VAL A . n A 1 17 ALA 17 14 14 ALA ALA A . n A 1 18 THR 18 15 15 THR THR A . n A 1 19 LEU 19 16 16 LEU LEU A . n A 1 20 THR 20 17 17 THR THR A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 ASN 22 19 19 ASN ASN A . n A 1 23 ASN 23 20 20 ASN ASN A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 LYS 25 22 22 LYS LYS A . n A 1 26 VAL 26 23 23 VAL VAL A . n A 1 27 ASN 27 24 24 ASN ASN A . n A 1 28 ALA 28 25 25 ALA ALA A . n A 1 29 ILE 29 26 26 ILE ILE A . n A 1 30 SER 30 27 27 SER SER A . n A 1 31 PRO 31 28 28 PRO PRO A . n A 1 32 ASP 32 29 29 ASP ASP A . n A 1 33 VAL 33 30 30 VAL VAL A . n A 1 34 ILE 34 31 31 ILE ILE A . n A 1 35 ILE 35 32 32 ILE ILE A . n A 1 36 ALA 36 33 33 ALA ALA A . n A 1 37 PHE 37 34 34 PHE PHE A . n A 1 38 ASN 38 35 35 ASN ASN A . n A 1 39 ALA 39 36 36 ALA ALA A . n A 1 40 ALA 40 37 37 ALA ALA A . n A 1 41 LEU 41 38 38 LEU LEU A . n A 1 42 ASP 42 39 39 ASP ASP A . n A 1 43 GLN 43 40 40 GLN GLN A . n A 1 44 ALA 44 41 41 ALA ALA A . n A 1 45 GLU 45 42 42 GLU GLU A . n A 1 46 LYS 46 43 43 LYS LYS A . n A 1 47 ASP 47 44 44 ASP ASP A . n A 1 48 ARG 48 45 45 ARG ARG A . n A 1 49 ALA 49 46 46 ALA ALA A . n A 1 50 ILE 50 47 47 ILE ILE A . n A 1 51 VAL 51 48 48 VAL VAL A . n A 1 52 ILE 52 49 49 ILE ILE A . n A 1 53 VAL 53 50 50 VAL VAL A . n A 1 54 THR 54 51 51 THR THR A . n A 1 55 GLY 55 52 52 GLY GLY A . n A 1 56 GLN 56 53 53 GLN GLN A . n A 1 57 PRO 57 54 54 PRO PRO A . n A 1 58 GLY 58 55 55 GLY GLY A . n A 1 59 ILE 59 56 56 ILE ILE A . n A 1 60 LEU 60 57 57 LEU LEU A . n A 1 61 SER 61 58 58 SER SER A . n A 1 62 GLY 62 59 59 GLY GLY A . n A 1 63 GLY 63 60 60 GLY GLY A . n A 1 64 TYR 64 61 61 TYR TYR A . n A 1 65 ASP 65 62 62 ASP ASP A . n A 1 66 LEU 66 63 63 LEU LEU A . n A 1 67 LYS 67 64 64 LYS LYS A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 MSE 69 66 66 MSE MSE A . n A 1 70 THR 70 67 67 THR THR A . n A 1 71 SER 71 68 68 SER SER A . n A 1 72 SER 72 69 69 SER SER A . n A 1 73 ALA 73 70 70 ALA ALA A . n A 1 74 GLU 74 71 71 GLU GLU A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 ALA 76 73 73 ALA ALA A . n A 1 77 ILE 77 74 74 ILE ILE A . n A 1 78 ASN 78 75 75 ASN ASN A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 VAL 80 77 77 VAL VAL A . n A 1 81 ALA 81 78 78 ALA ALA A . n A 1 82 GLN 82 79 79 GLN GLN A . n A 1 83 GLY 83 80 80 GLY GLY A . n A 1 84 SER 84 81 81 SER SER A . n A 1 85 THR 85 82 82 THR THR A . n A 1 86 LEU 86 83 83 LEU LEU A . n A 1 87 ALA 87 84 84 ALA ALA A . n A 1 88 ARG 88 85 85 ARG ARG A . n A 1 89 ARG 89 86 86 ARG ARG A . n A 1 90 MSE 90 87 87 MSE MSE A . n A 1 91 LEU 91 88 88 LEU LEU A . n A 1 92 SER 92 89 89 SER SER A . n A 1 93 HIS 93 90 90 HIS HIS A . n A 1 94 PRO 94 91 91 PRO PRO A . n A 1 95 PHE 95 92 92 PHE PHE A . n A 1 96 PRO 96 93 93 PRO PRO A . n A 1 97 ILE 97 94 94 ILE ILE A . n A 1 98 ILE 98 95 95 ILE ILE A . n A 1 99 VAL 99 96 96 VAL VAL A . n A 1 100 ALA 100 97 97 ALA ALA A . n A 1 101 CYS 101 98 98 CYS CYS A . n A 1 102 PRO 102 99 99 PRO PRO A . n A 1 103 GLY 103 100 100 GLY GLY A . n A 1 104 HIS 104 101 101 HIS HIS A . n A 1 105 ALA 105 102 102 ALA ALA A . n A 1 106 VAL 106 103 103 VAL VAL A . n A 1 107 ALA 107 104 104 ALA ALA A . n A 1 108 LYS 108 105 105 LYS LYS A . n A 1 109 GLY 109 106 106 GLY GLY A . n A 1 110 ALA 110 107 107 ALA ALA A . n A 1 111 PHE 111 108 108 PHE PHE A . n A 1 112 LEU 112 109 109 LEU LEU A . n A 1 113 LEU 113 110 110 LEU LEU A . n A 1 114 LEU 114 111 111 LEU LEU A . n A 1 115 SER 115 112 112 SER SER A . n A 1 116 ALA 116 113 113 ALA ALA A . n A 1 117 ASP 117 114 114 ASP ASP A . n A 1 118 TYR 118 115 115 TYR TYR A . n A 1 119 ARG 119 116 116 ARG ARG A . n A 1 120 ILE 120 117 117 ILE ILE A . n A 1 121 GLY 121 118 118 GLY GLY A . n A 1 122 VAL 122 119 119 VAL VAL A . n A 1 123 ALA 123 120 120 ALA ALA A . n A 1 124 GLY 124 121 121 GLY GLY A . n A 1 125 PRO 125 122 122 PRO PRO A . n A 1 126 PHE 126 123 123 PHE PHE A . n A 1 127 SER 127 124 124 SER SER A . n A 1 128 ILE 128 125 125 ILE ILE A . n A 1 129 GLY 129 126 126 GLY GLY A . n A 1 130 LEU 130 127 127 LEU LEU A . n A 1 131 ASN 131 128 128 ASN ASN A . n A 1 132 GLU 132 129 129 GLU GLU A . n A 1 133 VAL 133 130 130 VAL VAL A . n A 1 134 GLN 134 131 131 GLN GLN A . n A 1 135 ILE 135 132 132 ILE ILE A . n A 1 136 GLY 136 133 133 GLY GLY A . n A 1 137 MSE 137 134 134 MSE MSE A . n A 1 138 THR 138 135 135 THR THR A . n A 1 139 MSE 139 136 136 MSE MSE A . n A 1 140 HIS 140 137 137 HIS HIS A . n A 1 141 HIS 141 138 138 HIS HIS A . n A 1 142 ALA 142 139 139 ALA ALA A . n A 1 143 GLY 143 140 140 GLY GLY A . n A 1 144 ILE 144 141 141 ILE ILE A . n A 1 145 GLU 145 142 142 GLU GLU A . n A 1 146 LEU 146 143 143 LEU LEU A . n A 1 147 ALA 147 144 144 ALA ALA A . n A 1 148 ARG 148 145 145 ARG ARG A . n A 1 149 ASP 149 146 146 ASP ASP A . n A 1 150 ARG 150 147 147 ARG ARG A . n A 1 151 LEU 151 148 148 LEU LEU A . n A 1 152 ARG 152 149 149 ARG ARG A . n A 1 153 LYS 153 150 150 LYS LYS A . n A 1 154 SER 154 151 151 SER SER A . n A 1 155 ALA 155 152 152 ALA ALA A . n A 1 156 PHE 156 153 153 PHE PHE A . n A 1 157 ASN 157 154 154 ASN ASN A . n A 1 158 ARG 158 155 155 ARG ARG A . n A 1 159 SER 159 156 156 SER SER A . n A 1 160 VAL 160 157 157 VAL VAL A . n A 1 161 ILE 161 158 158 ILE ILE A . n A 1 162 ASN 162 159 159 ASN ASN A . n A 1 163 ALA 163 160 160 ALA ALA A . n A 1 164 GLU 164 161 161 GLU GLU A . n A 1 165 MSE 165 162 162 MSE MSE A . n A 1 166 PHE 166 163 163 PHE PHE A . n A 1 167 ASP 167 164 164 ASP ASP A . n A 1 168 PRO 168 165 165 PRO PRO A . n A 1 169 GLU 169 166 166 GLU GLU A . n A 1 170 GLY 170 167 167 GLY GLY A . n A 1 171 ALA 171 168 168 ALA ALA A . n A 1 172 MSE 172 169 169 MSE MSE A . n A 1 173 ALA 173 170 170 ALA ALA A . n A 1 174 ALA 174 171 171 ALA ALA A . n A 1 175 GLY 175 172 172 GLY GLY A . n A 1 176 PHE 176 173 173 PHE PHE A . n A 1 177 LEU 177 174 174 LEU LEU A . n A 1 178 ASP 178 175 175 ASP ASP A . n A 1 179 LYS 179 176 176 LYS LYS A . n A 1 180 VAL 180 177 177 VAL VAL A . n A 1 181 VAL 181 178 178 VAL VAL A . n A 1 182 SER 182 179 179 SER SER A . n A 1 183 VAL 183 180 180 VAL VAL A . n A 1 184 GLU 184 181 181 GLU GLU A . n A 1 185 GLU 185 182 182 GLU GLU A . n A 1 186 LEU 186 183 183 LEU LEU A . n A 1 187 GLN 187 184 184 GLN GLN A . n A 1 188 GLY 188 185 185 GLY GLY A . n A 1 189 ALA 189 186 186 ALA ALA A . n A 1 190 ALA 190 187 187 ALA ALA A . n A 1 191 LEU 191 188 188 LEU LEU A . n A 1 192 ALA 192 189 189 ALA ALA A . n A 1 193 VAL 193 190 190 VAL VAL A . n A 1 194 ALA 194 191 191 ALA ALA A . n A 1 195 ALA 195 192 192 ALA ALA A . n A 1 196 GLN 196 193 193 GLN GLN A . n A 1 197 LEU 197 194 194 LEU LEU A . n A 1 198 LYS 198 195 195 LYS LYS A . n A 1 199 LYS 199 196 196 LYS LYS A . n A 1 200 ILE 200 197 197 ILE ILE A . n A 1 201 ASN 201 198 198 ASN ASN A . n A 1 202 MSE 202 199 199 MSE MSE A . n A 1 203 ASN 203 200 200 ASN ASN A . n A 1 204 ALA 204 201 201 ALA ALA A . n A 1 205 HIS 205 202 202 HIS HIS A . n A 1 206 LYS 206 203 203 LYS LYS A . n A 1 207 LYS 207 204 204 LYS LYS A . n A 1 208 THR 208 205 205 THR THR A . n A 1 209 LYS 209 206 206 LYS LYS A . n A 1 210 LEU 210 207 207 LEU LEU A . n A 1 211 LYS 211 208 208 LYS LYS A . n A 1 212 VAL 212 209 209 VAL VAL A . n A 1 213 ARG 213 210 210 ARG ARG A . n A 1 214 LYS 214 211 211 LYS LYS A . n A 1 215 GLY 215 212 212 GLY GLY A . n A 1 216 LEU 216 213 213 LEU LEU A . n A 1 217 LEU 217 214 214 LEU LEU A . n A 1 218 ASP 218 215 215 ASP ASP A . n A 1 219 THR 219 216 216 THR THR A . n A 1 220 LEU 220 217 217 LEU LEU A . n A 1 221 ASP 221 218 218 ASP ASP A . n A 1 222 ALA 222 219 219 ALA ALA A . n A 1 223 ALA 223 220 220 ALA ALA A . n A 1 224 ILE 224 221 221 ILE ILE A . n A 1 225 GLU 225 222 222 GLU GLU A . n A 1 226 GLN 226 223 223 GLN GLN A . n A 1 227 ASP 227 224 224 ASP ASP A . n A 1 228 ARG 228 225 225 ARG ARG A . n A 1 229 GLN 229 226 226 GLN GLN A . n A 1 230 HIS 230 227 227 HIS HIS A . n A 1 231 MSE 231 228 228 MSE MSE A . n A 1 232 LEU 232 229 229 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 69 A MSE 66 ? MET SELENOMETHIONINE 3 A MSE 90 A MSE 87 ? MET SELENOMETHIONINE 4 A MSE 137 A MSE 134 ? MET SELENOMETHIONINE 5 A MSE 139 A MSE 136 ? MET SELENOMETHIONINE 6 A MSE 165 A MSE 162 ? MET SELENOMETHIONINE 7 A MSE 172 A MSE 169 ? MET SELENOMETHIONINE 8 A MSE 202 A MSE 199 ? MET SELENOMETHIONINE 9 A MSE 231 A MSE 228 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2,3 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 7780 ? 2 MORE -43 ? 2 'SSA (A^2)' 24730 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_665 -z+3/2,-x+1,y+1/2 0.0000000000 0.0000000000 -1.0000000000 243.7755000000 -1.0000000000 0.0000000000 0.0000000000 162.5170000000 0.0000000000 1.0000000000 0.0000000000 81.2585000000 3 'crystal symmetry operation' 10_646 -y+1,z-1/2,-x+3/2 0.0000000000 -1.0000000000 0.0000000000 162.5170000000 0.0000000000 0.0000000000 1.0000000000 -81.2585000000 -1.0000000000 0.0000000000 0.0000000000 243.7755000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-10-06 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 HKL-3000 phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 45 ? ? CZ A ARG 45 ? ? NH2 A ARG 45 ? ? 116.81 120.30 -3.49 0.50 N 2 1 NE A ARG 149 ? ? CZ A ARG 149 ? ? NH1 A ARG 149 ? ? 123.63 120.30 3.33 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 58 ? ? -172.93 142.20 2 1 ALA A 104 ? ? 59.83 -131.08 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 3 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPD 1 301 301 MPD MPD A . C 3 MRD 1 302 302 MRD MPD A . D 4 HOH 1 230 1 HOH HOH A . D 4 HOH 2 231 2 HOH HOH A . D 4 HOH 3 232 3 HOH HOH A . D 4 HOH 4 233 4 HOH HOH A . D 4 HOH 5 234 5 HOH HOH A . D 4 HOH 6 235 6 HOH HOH A . D 4 HOH 7 236 7 HOH HOH A . D 4 HOH 8 237 8 HOH HOH A . D 4 HOH 9 238 9 HOH HOH A . D 4 HOH 10 239 10 HOH HOH A . D 4 HOH 11 240 11 HOH HOH A . D 4 HOH 12 241 12 HOH HOH A . D 4 HOH 13 242 13 HOH HOH A . D 4 HOH 14 243 14 HOH HOH A . D 4 HOH 15 244 15 HOH HOH A . D 4 HOH 16 245 16 HOH HOH A . D 4 HOH 17 246 18 HOH HOH A . D 4 HOH 18 247 19 HOH HOH A . D 4 HOH 19 248 20 HOH HOH A . D 4 HOH 20 249 21 HOH HOH A . D 4 HOH 21 250 22 HOH HOH A . D 4 HOH 22 251 23 HOH HOH A . D 4 HOH 23 252 24 HOH HOH A . D 4 HOH 24 253 25 HOH HOH A . D 4 HOH 25 254 26 HOH HOH A . D 4 HOH 26 255 27 HOH HOH A . D 4 HOH 27 256 28 HOH HOH A . D 4 HOH 28 257 29 HOH HOH A . D 4 HOH 29 258 30 HOH HOH A . D 4 HOH 30 259 31 HOH HOH A . D 4 HOH 31 260 32 HOH HOH A . D 4 HOH 32 261 33 HOH HOH A . D 4 HOH 33 262 34 HOH HOH A . D 4 HOH 34 263 35 HOH HOH A . D 4 HOH 35 264 36 HOH HOH A . D 4 HOH 36 265 37 HOH HOH A . D 4 HOH 37 266 38 HOH HOH A . D 4 HOH 38 267 39 HOH HOH A . D 4 HOH 39 268 40 HOH HOH A . D 4 HOH 40 269 41 HOH HOH A . D 4 HOH 41 270 42 HOH HOH A . D 4 HOH 42 271 43 HOH HOH A . D 4 HOH 43 272 44 HOH HOH A . D 4 HOH 44 273 45 HOH HOH A . D 4 HOH 45 274 46 HOH HOH A . D 4 HOH 46 275 47 HOH HOH A . D 4 HOH 47 276 48 HOH HOH A . D 4 HOH 48 277 49 HOH HOH A . D 4 HOH 49 278 50 HOH HOH A . D 4 HOH 50 279 51 HOH HOH A . D 4 HOH 51 280 52 HOH HOH A . D 4 HOH 52 281 53 HOH HOH A . D 4 HOH 53 282 54 HOH HOH A . D 4 HOH 54 283 55 HOH HOH A . D 4 HOH 55 284 56 HOH HOH A . D 4 HOH 56 285 57 HOH HOH A . D 4 HOH 57 286 58 HOH HOH A . D 4 HOH 58 287 59 HOH HOH A . D 4 HOH 59 288 60 HOH HOH A . D 4 HOH 60 289 61 HOH HOH A . D 4 HOH 61 290 62 HOH HOH A . D 4 HOH 62 291 63 HOH HOH A . D 4 HOH 63 292 64 HOH HOH A . D 4 HOH 64 293 65 HOH HOH A . D 4 HOH 65 294 66 HOH HOH A . D 4 HOH 66 295 67 HOH HOH A . D 4 HOH 67 296 68 HOH HOH A . D 4 HOH 68 297 69 HOH HOH A . D 4 HOH 69 298 70 HOH HOH A . D 4 HOH 70 299 71 HOH HOH A . D 4 HOH 71 300 72 HOH HOH A . D 4 HOH 72 303 73 HOH HOH A . D 4 HOH 73 304 74 HOH HOH A . D 4 HOH 74 305 75 HOH HOH A . D 4 HOH 75 306 76 HOH HOH A . D 4 HOH 76 307 78 HOH HOH A . D 4 HOH 77 308 79 HOH HOH A . D 4 HOH 78 309 80 HOH HOH A . D 4 HOH 79 310 81 HOH HOH A . D 4 HOH 80 311 83 HOH HOH A . D 4 HOH 81 312 84 HOH HOH A . D 4 HOH 82 313 85 HOH HOH A . #