HEADER PLANT PROTEIN 23-SEP-10 3OYO TITLE CRYSTAL STRUCTURE OF HEMOPEXIN FOLD PROTEIN CP4 FROM COW PEA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOPEXIN FOLD PROTEIN CP4; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIGNA UNGUICULATA; SOURCE 3 ORGANISM_COMMON: COWPEA; SOURCE 4 ORGANISM_TAXID: 3917 KEYWDS HEMOPEXIN, SEEDS, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.GAUR,V.CHANANA,D.M.SALUNKE REVDAT 3 01-NOV-23 3OYO 1 REMARK LINK REVDAT 2 26-MAR-14 3OYO 1 JRNL VERSN REVDAT 1 09-FEB-11 3OYO 0 JRNL AUTH V.GAUR,V.CHANANA,A.JAIN,D.M.SALUNKE JRNL TITL THE STRUCTURE OF A HAEMOPEXIN-FOLD PROTEIN FROM COW PEA JRNL TITL 2 (VIGNA UNGUICULATA) SUGGESTS FUNCTIONAL DIVERSITY OF JRNL TITL 3 HAEMOPEXINS IN PLANTS JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 67 193 2011 JRNL REFN ESSN 1744-3091 JRNL PMID 21301085 JRNL DOI 10.1107/S1744309110051250 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 22725 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2517 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1427 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2390 REMARK 3 BIN FREE R VALUE SET COUNT : 162 REMARK 3 BIN FREE R VALUE : 0.2840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3504 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 182 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : -0.64000 REMARK 3 B33 (A**2) : 0.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.66000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.222 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.413 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.891 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3602 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4898 ; 1.647 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 448 ; 4.529 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 164 ;31.525 ;23.780 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 542 ;14.556 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;18.565 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 526 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2818 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1732 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2512 ; 0.322 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 225 ; 0.160 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.204 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.120 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2238 ; 2.510 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3614 ; 3.678 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1395 ; 1.979 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1284 ; 2.992 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3OYO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000061737. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOMAR REMARK 200 DATA SCALING SOFTWARE : AUTOMAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27508 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.32200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 3LP9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM TRIS-HCL, 30% PEG 8000 , PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.54350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.06900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.54350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.06900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA B 123 O HOH B 231 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR B 93 N - CA - C ANGL. DEV. = -16.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 23 -130.55 51.90 REMARK 500 CYS A 66 144.47 -175.27 REMARK 500 THR A 70 -76.47 -112.64 REMARK 500 ALA A 72 -132.19 52.84 REMARK 500 SER A 73 40.39 -108.88 REMARK 500 SER A 79 114.05 -162.68 REMARK 500 SER A 119 160.80 170.95 REMARK 500 ALA A 123 148.03 -172.68 REMARK 500 PRO A 183 61.65 -104.75 REMARK 500 ILE A 224 -44.08 -131.38 REMARK 500 LYS B 23 -130.39 51.94 REMARK 500 SER B 37 34.09 -96.32 REMARK 500 THR B 70 -71.79 -111.92 REMARK 500 ALA B 72 -139.93 55.65 REMARK 500 ALA B 89 85.65 26.52 REMARK 500 THR B 92 63.32 23.08 REMARK 500 SER B 119 153.79 175.21 REMARK 500 PRO B 183 58.88 -101.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR B 92 THR B 93 147.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 228 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 7 O REMARK 620 2 ASN A 7 OD1 70.6 REMARK 620 3 ASP A 65 O 76.4 101.3 REMARK 620 4 ASP A 121 O 114.5 172.5 75.4 REMARK 620 5 ASP A 174 O 74.6 105.3 130.9 81.7 REMARK 620 6 HOH A 285 O 135.6 76.5 140.1 101.7 86.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 228 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 7 O REMARK 620 2 ASN B 7 OD1 76.7 REMARK 620 3 ASP B 65 O 71.3 102.3 REMARK 620 4 ASP B 121 O 109.1 170.4 73.2 REMARK 620 5 ASP B 174 O 69.8 105.7 124.3 83.7 REMARK 620 6 HOH B 298 O 143.2 78.2 140.9 99.7 91.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 229 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 230 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 229 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 230 REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY REMARK 999 EXIST. DBREF 3OYO A 3 227 PDB 3OYO 3OYO 3 227 DBREF 3OYO B 3 227 PDB 3OYO 3OYO 3 227 SEQRES 1 A 225 ALA PRO TYR ILE ASN ALA ALA PHE ARG SER SER SER GLU SEQRES 2 A 225 TYR GLU VAL TYR PHE PHE ALA LYS ASN LYS TYR VAL ARG SEQRES 3 A 225 LEU HIS TYR THR PRO GLY ALA SER SER ASP THR ILE LEU SEQRES 4 A 225 THR ASN LEU ARG LEU ILE SER SER GLY PHE PRO SER LEU SEQRES 5 A 225 ALA GLY THR PRO PHE ALA GLU PRO GLY ILE ASP CYS SER SEQRES 6 A 225 PHE HIS THR GLU ALA SER GLU ALA TYR VAL PHE SER GLY SEQRES 7 A 225 ASN HIS SER ALA TYR ILE ASP TYR ALA PRO GLY THR THR SEQRES 8 A 225 ASN ASP LYS ILE LEU VAL GLY PRO THR THR ILE ALA GLU SEQRES 9 A 225 MET PHE PRO VAL LEU ASN ASN THR VAL PHE GLU ASP SER SEQRES 10 A 225 ILE ASP SER ALA PHE ARG SER THR LYS GLY LYS GLU VAL SEQRES 11 A 225 TYR LEU PHE LYS GLY ASN LYS TYR VAL ARG ILE ALA TYR SEQRES 12 A 225 ASP SER LYS GLN LEU VAL GLY ASN ILE ARG ASN ILE GLY SEQRES 13 A 225 ASP GLY PHE PRO VAL LEU ASN GLY THR GLU PHE GLU SER SEQRES 14 A 225 GLY ILE ASP ALA CYS PHE ALA SER HIS LYS GLU PRO GLU SEQRES 15 A 225 ALA TYR LEU PHE LYS GLY GLN ASN TYR VAL ARG ILE ASP SEQRES 16 A 225 PHE THR PRO GLY GLY LYS ALA ASP THR LEU VAL GLY ASN SEQRES 17 A 225 ILE ARG PRO ILE LEU ASP GLY TRP PRO VAL LEU LYS GLY SEQRES 18 A 225 ILE PHE PRO VAL SEQRES 1 B 225 ALA PRO TYR ILE ASN ALA ALA PHE ARG SER SER SER GLU SEQRES 2 B 225 TYR GLU VAL TYR PHE PHE ALA LYS ASN LYS TYR VAL ARG SEQRES 3 B 225 LEU HIS TYR THR PRO GLY ALA SER SER ASP THR ILE LEU SEQRES 4 B 225 THR ASN LEU ARG LEU ILE SER SER GLY PHE PRO SER LEU SEQRES 5 B 225 ALA GLY THR PRO PHE ALA GLU PRO GLY ILE ASP CYS SER SEQRES 6 B 225 PHE HIS THR GLU ALA SER GLU ALA TYR VAL PHE SER GLY SEQRES 7 B 225 ASN HIS SER ALA TYR ILE ASP TYR ALA PRO GLY THR THR SEQRES 8 B 225 ASN ASP LYS ILE LEU VAL GLY PRO THR THR ILE ALA GLU SEQRES 9 B 225 MET PHE PRO VAL LEU ASN ASN THR VAL PHE GLU ASP SER SEQRES 10 B 225 ILE ASP SER ALA PHE ARG SER THR LYS GLY LYS GLU VAL SEQRES 11 B 225 TYR LEU PHE LYS GLY ASN LYS TYR VAL ARG ILE ALA TYR SEQRES 12 B 225 ASP SER LYS GLN LEU VAL GLY ASN ILE ARG ASN ILE GLY SEQRES 13 B 225 ASP GLY PHE PRO VAL LEU ASN GLY THR GLU PHE GLU SER SEQRES 14 B 225 GLY ILE ASP ALA CYS PHE ALA SER HIS LYS GLU PRO GLU SEQRES 15 B 225 ALA TYR LEU PHE LYS GLY GLN ASN TYR VAL ARG ILE ASP SEQRES 16 B 225 PHE THR PRO GLY GLY LYS ALA ASP THR LEU VAL GLY ASN SEQRES 17 B 225 ILE ARG PRO ILE LEU ASP GLY TRP PRO VAL LEU LYS GLY SEQRES 18 B 225 ILE PHE PRO VAL HET CA A 228 1 HET CL A 229 1 HET NA A 230 1 HET CA B 228 1 HET CL B 229 1 HET NA B 230 1 HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 3 CA 2(CA 2+) FORMUL 4 CL 2(CL 1-) FORMUL 5 NA 2(NA 1+) FORMUL 9 HOH *182(H2 O) HELIX 1 1 ILE A 47 PHE A 51 1 5 HELIX 2 2 PRO A 52 ALA A 55 5 4 HELIX 3 3 ILE A 104 PHE A 108 1 5 HELIX 4 4 PRO A 109 ASN A 112 5 4 HELIX 5 5 ILE A 157 PHE A 161 1 5 HELIX 6 6 PRO A 162 ASN A 165 5 4 HELIX 7 7 GLY A 202 THR A 206 5 5 HELIX 8 8 ILE A 214 TRP A 218 1 5 HELIX 9 9 PRO A 219 LYS A 222 5 4 HELIX 10 10 ILE B 47 PHE B 51 1 5 HELIX 11 11 PRO B 52 ALA B 55 5 4 HELIX 12 12 ILE B 104 PHE B 108 1 5 HELIX 13 13 PRO B 109 ASN B 112 5 4 HELIX 14 14 ILE B 157 PHE B 161 1 5 HELIX 15 15 PRO B 162 ASN B 165 5 4 HELIX 16 16 GLY B 202 THR B 206 5 5 HELIX 17 17 ILE B 214 TRP B 218 1 5 HELIX 18 18 PRO B 219 LYS B 222 5 4 SHEET 1 A 4 ALA A 8 ARG A 11 0 SHEET 2 A 4 GLU A 17 ALA A 22 -1 O PHE A 21 N ALA A 8 SHEET 3 A 4 LYS A 25 HIS A 30 -1 O LEU A 29 N VAL A 18 SHEET 4 A 4 THR A 39 LEU A 46 -1 O THR A 39 N HIS A 30 SHEET 1 B 4 CYS A 66 HIS A 69 0 SHEET 2 B 4 GLU A 74 SER A 79 -1 O PHE A 78 N CYS A 66 SHEET 3 B 4 HIS A 82 ASP A 87 -1 O ILE A 86 N ALA A 75 SHEET 4 B 4 LYS A 96 THR A 103 -1 O THR A 102 N SER A 83 SHEET 1 C 4 SER A 122 ARG A 125 0 SHEET 2 C 4 GLU A 131 LYS A 136 -1 O PHE A 135 N SER A 122 SHEET 3 C 4 LYS A 139 ALA A 144 -1 O VAL A 141 N LEU A 134 SHEET 4 C 4 GLN A 149 ASN A 156 -1 O VAL A 151 N ARG A 142 SHEET 1 D 4 ALA A 175 ALA A 178 0 SHEET 2 D 4 GLU A 184 LYS A 189 -1 O PHE A 188 N ALA A 175 SHEET 3 D 4 ASN A 192 ASP A 197 -1 O ASN A 192 N LYS A 189 SHEET 4 D 4 LEU A 207 VAL A 208 -1 O LEU A 207 N ASP A 197 SHEET 1 E 4 ALA A 175 ALA A 178 0 SHEET 2 E 4 GLU A 184 LYS A 189 -1 O PHE A 188 N ALA A 175 SHEET 3 E 4 ASN A 192 ASP A 197 -1 O ASN A 192 N LYS A 189 SHEET 4 E 4 ARG A 212 PRO A 213 -1 O ARG A 212 N TYR A 193 SHEET 1 F 4 ALA B 8 ARG B 11 0 SHEET 2 F 4 GLU B 17 ALA B 22 -1 O PHE B 21 N ALA B 8 SHEET 3 F 4 LYS B 25 HIS B 30 -1 O LEU B 29 N VAL B 18 SHEET 4 F 4 THR B 39 LEU B 46 -1 O THR B 39 N HIS B 30 SHEET 1 G 4 CYS B 66 HIS B 69 0 SHEET 2 G 4 GLU B 74 SER B 79 -1 O TYR B 76 N PHE B 68 SHEET 3 G 4 HIS B 82 ASP B 87 -1 O ILE B 86 N ALA B 75 SHEET 4 G 4 LYS B 96 THR B 103 -1 O THR B 102 N SER B 83 SHEET 1 H 4 SER B 122 ARG B 125 0 SHEET 2 H 4 GLU B 131 LYS B 136 -1 O TYR B 133 N PHE B 124 SHEET 3 H 4 LYS B 139 ALA B 144 -1 O VAL B 141 N LEU B 134 SHEET 4 H 4 LEU B 150 ASN B 156 -1 O VAL B 151 N ARG B 142 SHEET 1 I 4 ALA B 175 ALA B 178 0 SHEET 2 I 4 GLU B 184 LYS B 189 -1 O PHE B 188 N ALA B 175 SHEET 3 I 4 ASN B 192 ASP B 197 -1 O ASN B 192 N LYS B 189 SHEET 4 I 4 LEU B 207 VAL B 208 -1 O LEU B 207 N ASP B 197 SHEET 1 J 4 ALA B 175 ALA B 178 0 SHEET 2 J 4 GLU B 184 LYS B 189 -1 O PHE B 188 N ALA B 175 SHEET 3 J 4 ASN B 192 ASP B 197 -1 O ASN B 192 N LYS B 189 SHEET 4 J 4 ARG B 212 PRO B 213 -1 O ARG B 212 N TYR B 193 LINK O ASN A 7 CA CA A 228 1555 1555 2.54 LINK OD1 ASN A 7 CA CA A 228 1555 1555 2.70 LINK O ASP A 65 CA CA A 228 1555 1555 2.47 LINK O ASP A 121 CA CA A 228 1555 1555 2.44 LINK O ASP A 174 CA CA A 228 1555 1555 2.55 LINK CA CA A 228 O HOH A 285 1555 1555 3.00 LINK O ASN B 7 CA CA B 228 1555 1555 2.53 LINK OD1 ASN B 7 CA CA B 228 1555 1555 2.74 LINK O ASP B 65 CA CA B 228 1555 1555 2.42 LINK O ASP B 121 CA CA B 228 1555 1555 2.46 LINK O ASP B 174 CA CA B 228 1555 1555 2.56 LINK CA CA B 228 O HOH B 298 1555 1555 2.95 CISPEP 1 GLU A 61 PRO A 62 0 1.34 CISPEP 2 GLY A 100 PRO A 101 0 -1.70 CISPEP 3 GLU A 182 PRO A 183 0 -1.04 CISPEP 4 PHE A 225 PRO A 226 0 -4.66 CISPEP 5 GLU B 61 PRO B 62 0 0.21 CISPEP 6 GLY B 100 PRO B 101 0 -2.00 CISPEP 7 GLU B 182 PRO B 183 0 -5.48 CISPEP 8 PHE B 225 PRO B 226 0 1.15 SITE 1 AC1 5 ASN A 7 ASP A 65 ASP A 121 ASP A 174 SITE 2 AC1 5 HOH A 285 SITE 1 AC2 6 ALA A 9 SER A 67 SER A 122 ALA A 123 SITE 2 AC2 6 CYS A 176 HOH A 231 SITE 1 AC3 3 HIS A 69 ARG A 125 ALA A 178 SITE 1 AC4 5 ASN B 7 ASP B 65 ASP B 121 ASP B 174 SITE 2 AC4 5 HOH B 298 SITE 1 AC5 7 ALA B 8 ALA B 9 SER B 67 SER B 122 SITE 2 AC5 7 ALA B 123 CYS B 176 HOH B 231 SITE 1 AC6 2 HIS B 69 ALA B 178 CRYST1 125.087 60.138 67.574 90.00 111.18 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007994 0.000000 0.003098 0.00000 SCALE2 0.000000 0.016628 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015871 0.00000