HEADER TRANSCRIPTION 30-SEP-10 3P1F TITLE CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN CREBBP IN COMPLEX WITH A TITLE 2 HYDROQUINAZOLIN LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: CREB-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BROMO DOMAIN, UNP RESIDUES 1081-1197; COMPND 5 EC: 2.3.1.48; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CREBBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS STRUCTURAL GENOMICS CONSORTIUM, SGC, CBP, CREBBP, CREB BINDING KEYWDS 2 PROTEIN ISOFORM A, KAT3A, RSTS, RST, BROMODOMAIN, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,S.PICAUD,O.FEDOROV,J.MUNIZ,F.VON DELFT, AUTHOR 2 C.H.ARROWSMITH,A.M.EDWARDS,J.WEIGELT,C.BOUNTRA,S.KNAPP,STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (SGC) REVDAT 3 06-SEP-23 3P1F 1 REMARK SEQADV LINK REVDAT 2 31-JAN-18 3P1F 1 AUTHOR JRNL REVDAT 1 08-DEC-10 3P1F 0 JRNL AUTH P.FILIPPAKOPOULOS,S.PICAUD,O.FEDOROV,J.MUNIZ,F.VON DELFT, JRNL AUTH 2 C.H.ARROWSMITH,A.M.EDWARDS,J.WEIGELT,C.BOUNTRA,S.KNAPP, JRNL AUTH 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN CREBBP IN JRNL TITL 2 COMPLEX WITH A HYDROQUINAZOLIN LIGAND JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 33249 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1685 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.63 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2296 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.4110 REMARK 3 BIN FREE R VALUE SET COUNT : 107 REMARK 3 BIN FREE R VALUE : 0.4630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1930 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 262 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.71000 REMARK 3 B22 (A**2) : -0.20000 REMARK 3 B33 (A**2) : 0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.66000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.097 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.480 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2048 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1451 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2770 ; 1.593 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3503 ; 0.957 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 232 ; 5.268 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;37.751 ;24.388 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 344 ;12.439 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.053 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 287 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2208 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 405 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1185 ; 2.776 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 452 ; 0.877 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1933 ; 4.170 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 863 ; 6.312 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 837 ; 8.487 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1079 A 1089 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3037 38.2405 39.7627 REMARK 3 T TENSOR REMARK 3 T11: 0.1970 T22: 0.0470 REMARK 3 T33: 0.0432 T12: 0.0025 REMARK 3 T13: -0.0032 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.0345 L22: 12.0473 REMARK 3 L33: 0.0680 L12: -0.4071 REMARK 3 L13: 0.0183 L23: -0.8583 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: 0.0235 S13: -0.0183 REMARK 3 S21: 0.3368 S22: -0.0109 S23: 0.0802 REMARK 3 S31: -0.0345 S32: -0.0064 S33: 0.0130 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1090 A 1168 REMARK 3 ORIGIN FOR THE GROUP (A): 21.4944 20.3414 26.6598 REMARK 3 T TENSOR REMARK 3 T11: 0.0683 T22: 0.0611 REMARK 3 T33: 0.0629 T12: -0.0009 REMARK 3 T13: -0.0171 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.3648 L22: 0.5588 REMARK 3 L33: 0.4968 L12: -0.3580 REMARK 3 L13: -0.1853 L23: 0.1354 REMARK 3 S TENSOR REMARK 3 S11: -0.0203 S12: 0.0160 S13: 0.0045 REMARK 3 S21: 0.0487 S22: 0.0011 S23: -0.0156 REMARK 3 S31: 0.0006 S32: 0.0362 S33: 0.0192 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1169 A 1197 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6488 21.5410 20.0041 REMARK 3 T TENSOR REMARK 3 T11: 0.0702 T22: 0.0629 REMARK 3 T33: 0.0949 T12: -0.0015 REMARK 3 T13: -0.0265 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 0.6902 L22: 0.4578 REMARK 3 L33: 0.7869 L12: -0.5538 REMARK 3 L13: -0.1553 L23: 0.1909 REMARK 3 S TENSOR REMARK 3 S11: 0.0740 S12: 0.0341 S13: -0.0374 REMARK 3 S21: -0.0718 S22: -0.0314 S23: 0.0495 REMARK 3 S31: -0.0005 S32: -0.0599 S33: -0.0426 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1083 B 1092 REMARK 3 ORIGIN FOR THE GROUP (A): 16.1308 13.0431 -10.8574 REMARK 3 T TENSOR REMARK 3 T11: 0.1780 T22: 0.2146 REMARK 3 T33: 0.1021 T12: -0.0411 REMARK 3 T13: 0.0089 T23: -0.0885 REMARK 3 L TENSOR REMARK 3 L11: 0.5384 L22: 6.2505 REMARK 3 L33: 12.7103 L12: -1.3152 REMARK 3 L13: 0.2883 L23: 5.4686 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: 0.2595 S13: -0.1295 REMARK 3 S21: -0.5788 S22: -0.4035 S23: 0.5167 REMARK 3 S31: -1.1812 S32: 0.5483 S33: 0.3871 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1093 B 1106 REMARK 3 ORIGIN FOR THE GROUP (A): 19.1538 -0.9042 -0.2062 REMARK 3 T TENSOR REMARK 3 T11: 0.0876 T22: 0.3665 REMARK 3 T33: 0.1521 T12: 0.1553 REMARK 3 T13: -0.0737 T23: -0.2035 REMARK 3 L TENSOR REMARK 3 L11: 0.1262 L22: 4.7811 REMARK 3 L33: 0.9317 L12: 0.1693 REMARK 3 L13: -0.3353 L23: -0.2014 REMARK 3 S TENSOR REMARK 3 S11: -0.0362 S12: -0.1665 S13: 0.1102 REMARK 3 S21: -0.1096 S22: 0.3180 S23: -0.0428 REMARK 3 S31: 0.2295 S32: 0.5193 S33: -0.2818 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1107 B 1197 REMARK 3 ORIGIN FOR THE GROUP (A): 10.9481 2.9754 6.8989 REMARK 3 T TENSOR REMARK 3 T11: 0.0594 T22: 0.0751 REMARK 3 T33: 0.0711 T12: 0.0208 REMARK 3 T13: -0.0168 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 0.0876 L22: 0.6764 REMARK 3 L33: 0.8881 L12: 0.2128 REMARK 3 L13: 0.1173 L23: 0.6182 REMARK 3 S TENSOR REMARK 3 S11: 0.0240 S12: 0.0478 S13: -0.0116 REMARK 3 S21: 0.0760 S22: 0.0972 S23: -0.0687 REMARK 3 S31: 0.0867 S32: 0.0630 S33: -0.1211 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3P1F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000061836. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.542 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33252 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 28.594 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : 0.05400 REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.51700 REMARK 200 R SYM FOR SHELL (I) : 0.51700 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: 3DWY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M KSCN 20% PEG3350 10% ETGLY, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 55.13500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.31000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 55.13500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.31000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 1079 REMARK 465 MET B 1080 REMARK 465 ARG B 1081 REMARK 465 LYS B 1082 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A1081 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1082 NZ REMARK 470 GLN A1118 CG CD OE1 NE2 REMARK 470 LYS A1170 CD CE NZ REMARK 470 GLN A1187 CD OE1 NE2 REMARK 470 LYS B1083 CE NZ REMARK 470 ILE B1084 CG1 CG2 CD1 REMARK 470 LYS B1086 CG CD CE NZ REMARK 470 GLU B1089 CG CD OE1 OE2 REMARK 470 GLN B1118 CG CD OE1 NE2 REMARK 470 GLN B1194 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 135 O HOH B 143 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 2 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 187 O REMARK 620 2 TRP A1165 O 140.1 REMARK 620 3 LEU A1166 O 74.7 76.4 REMARK 620 4 ASN A1168 O 78.0 77.7 94.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 1 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 EDO A 6 O1 REMARK 620 2 HOH A 225 O 47.6 REMARK 620 3 HOH B 162 O 139.1 109.7 REMARK 620 4 TRP B1165 O 70.2 99.3 148.8 REMARK 620 5 LEU B1166 O 101.7 146.3 84.3 77.5 REMARK 620 6 ASN B1168 O 141.7 116.1 75.6 81.7 96.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3PF A 1198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3PF B 1198 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3P1C RELATED DB: PDB REMARK 900 RELATED ID: 3P1D RELATED DB: PDB REMARK 900 RELATED ID: 3P1E RELATED DB: PDB DBREF 3P1F A 1081 1197 UNP Q92793 CBP_HUMAN 1081 1197 DBREF 3P1F B 1081 1197 UNP Q92793 CBP_HUMAN 1081 1197 SEQADV 3P1F SER A 1079 UNP Q92793 EXPRESSION TAG SEQADV 3P1F MET A 1080 UNP Q92793 EXPRESSION TAG SEQADV 3P1F SER B 1079 UNP Q92793 EXPRESSION TAG SEQADV 3P1F MET B 1080 UNP Q92793 EXPRESSION TAG SEQRES 1 A 119 SER MET ARG LYS LYS ILE PHE LYS PRO GLU GLU LEU ARG SEQRES 2 A 119 GLN ALA LEU MET PRO THR LEU GLU ALA LEU TYR ARG GLN SEQRES 3 A 119 ASP PRO GLU SER LEU PRO PHE ARG GLN PRO VAL ASP PRO SEQRES 4 A 119 GLN LEU LEU GLY ILE PRO ASP TYR PHE ASP ILE VAL LYS SEQRES 5 A 119 ASN PRO MET ASP LEU SER THR ILE LYS ARG LYS LEU ASP SEQRES 6 A 119 THR GLY GLN TYR GLN GLU PRO TRP GLN TYR VAL ASP ASP SEQRES 7 A 119 VAL TRP LEU MET PHE ASN ASN ALA TRP LEU TYR ASN ARG SEQRES 8 A 119 LYS THR SER ARG VAL TYR LYS PHE CYS SER LYS LEU ALA SEQRES 9 A 119 GLU VAL PHE GLU GLN GLU ILE ASP PRO VAL MET GLN SER SEQRES 10 A 119 LEU GLY SEQRES 1 B 119 SER MET ARG LYS LYS ILE PHE LYS PRO GLU GLU LEU ARG SEQRES 2 B 119 GLN ALA LEU MET PRO THR LEU GLU ALA LEU TYR ARG GLN SEQRES 3 B 119 ASP PRO GLU SER LEU PRO PHE ARG GLN PRO VAL ASP PRO SEQRES 4 B 119 GLN LEU LEU GLY ILE PRO ASP TYR PHE ASP ILE VAL LYS SEQRES 5 B 119 ASN PRO MET ASP LEU SER THR ILE LYS ARG LYS LEU ASP SEQRES 6 B 119 THR GLY GLN TYR GLN GLU PRO TRP GLN TYR VAL ASP ASP SEQRES 7 B 119 VAL TRP LEU MET PHE ASN ASN ALA TRP LEU TYR ASN ARG SEQRES 8 B 119 LYS THR SER ARG VAL TYR LYS PHE CYS SER LYS LEU ALA SEQRES 9 B 119 GLU VAL PHE GLU GLN GLU ILE ASP PRO VAL MET GLN SER SEQRES 10 B 119 LEU GLY HET EDO A 1 4 HET EDO A 3 4 HET EDO A 6 4 HET K A 2 1 HET 3PF A1198 12 HET EDO B 2 4 HET EDO B 4 4 HET EDO B 5 4 HET EDO B 7 4 HET EDO B 8 4 HET K B 1 1 HET 3PF B1198 12 HETNAM EDO 1,2-ETHANEDIOL HETNAM K POTASSIUM ION HETNAM 3PF 3-METHYL-3,4-DIHYDROQUINAZOLIN-2(1H)-ONE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 8(C2 H6 O2) FORMUL 6 K 2(K 1+) FORMUL 7 3PF 2(C9 H10 N2 O) FORMUL 15 HOH *262(H2 O) HELIX 1 1 LYS A 1086 ARG A 1103 1 18 HELIX 2 2 SER A 1108 ARG A 1112 5 5 HELIX 3 3 ASP A 1116 GLY A 1121 1 6 HELIX 4 4 ASP A 1124 VAL A 1129 1 6 HELIX 5 5 ASP A 1134 THR A 1144 1 11 HELIX 6 6 GLU A 1149 ASN A 1168 1 20 HELIX 7 7 SER A 1172 GLY A 1197 1 26 HELIX 8 8 LYS B 1086 ARG B 1103 1 18 HELIX 9 9 SER B 1108 ARG B 1112 5 5 HELIX 10 10 ASP B 1116 GLY B 1121 1 6 HELIX 11 11 ASP B 1124 VAL B 1129 1 6 HELIX 12 12 ASP B 1134 THR B 1144 1 11 HELIX 13 13 GLU B 1149 ASN B 1168 1 20 HELIX 14 14 SER B 1172 GLY B 1197 1 26 LINK K K A 2 O HOH A 187 1555 1555 3.09 LINK K K A 2 O TRP A1165 1555 1555 2.75 LINK K K A 2 O LEU A1166 1555 1555 2.88 LINK K K A 2 O ASN A1168 1555 1555 2.75 LINK O1 EDO A 6 K K B 1 1555 1555 2.73 LINK O HOH A 225 K K B 1 1555 1555 2.92 LINK K K B 1 O HOH B 162 1555 1555 2.99 LINK K K B 1 O TRP B1165 1555 1555 2.71 LINK K K B 1 O LEU B1166 1555 1555 2.99 LINK K K B 1 O ASN B1168 1555 1555 2.60 CISPEP 1 ASP A 1105 PRO A 1106 0 15.34 CISPEP 2 ASP B 1105 PRO B 1106 0 13.65 SITE 1 AC1 7 HOH A 100 SER A1079 GLN A1092 MET A1095 SITE 2 AC1 7 GLU A1099 HOH B 33 HOH B 62 SITE 1 AC2 4 HOH A 67 LYS A1141 GLN A1146 GLN A1152 SITE 1 AC3 9 HOH A 54 HOH A 225 HOH A 239 ASP A1105 SITE 2 AC3 9 PRO A1106 K B 1 HOH B 98 TRP B1165 SITE 3 AC3 9 LEU B1166 SITE 1 AC4 4 HOH A 187 TRP A1165 LEU A1166 ASN A1168 SITE 1 AC5 5 HOH A 11 PRO A1110 VAL A1115 ASN A1168 SITE 2 AC5 5 VAL A1174 SITE 1 AC6 7 PRO A1106 ARG A1173 PHE A1177 HOH B 226 SITE 2 AC6 7 TRP B1165 TYR B1175 SER B1179 SITE 1 AC7 6 HOH B 23 HOH B 25 HOH B 65 TRP B1158 SITE 2 AC7 6 LEU B1159 ASN B1162 SITE 1 AC8 6 HOH B 169 ILE B1128 VAL B1129 LYS B1130 SITE 2 AC8 6 ASN B1131 ASN B1163 SITE 1 AC9 4 SER A1179 GLU A1183 GLU A1186 ARG B1173 SITE 1 BC1 4 TYR A1175 SER A1179 PRO B1106 ARG B1173 SITE 1 BC2 6 EDO A 6 HOH A 225 HOH B 162 TRP B1165 SITE 2 BC2 6 LEU B1166 ASN B1168 SITE 1 BC3 6 PRO B1110 VAL B1115 LEU B1120 ASN B1168 SITE 2 BC3 6 VAL B1174 HOH B1199 CRYST1 110.270 38.620 79.460 90.00 127.67 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009069 0.000000 0.007001 0.00000 SCALE2 0.000000 0.025893 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015899 0.00000