data_3P6D # _entry.id 3P6D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3P6D pdb_00003p6d 10.2210/pdb3p6d/pdb RCSB RCSB062012 ? ? WWPDB D_1000062012 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2015-02-11 4 'Structure model' 1 3 2015-02-25 5 'Structure model' 1 4 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' struct_ref_seq_dif 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3P6D _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-10-11 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3P6C . unspecified PDB 3P6e . unspecified PDB 3P6f . unspecified PDB 3P6g . unspecified PDB 3P6h . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gonzalez, J.M.' 1 'Pozharski, E.' 2 # _citation.id primary _citation.title 'Structural analysis of ibuprofen binding to human adipocyte fatty-acid binding protein (FABP4).' _citation.journal_abbrev 'Acta Crystallogr F Struct Biol Commun' _citation.journal_volume 71 _citation.page_first 163 _citation.page_last 170 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25664790 _citation.pdbx_database_id_DOI 10.1107/S2053230X14027897 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gonzalez, J.M.' 1 ? primary 'Fisher, S.Z.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Fatty acid-binding protein, adipocyte' 15485.729 1 ? ? ? ? 2 non-polymer syn '3-(4-methoxy-3-methylphenyl)propanoic acid' 194.227 1 ? ? ? ? 3 water nat water 18.015 230 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Adipocyte lipid-binding protein, ALBP, Adipocyte-type fatty acid-binding protein, A-FABP, AFABP, Fatty acid-binding protein 4' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QQMGRGSMCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDE VTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA ; _entity_poly.pdbx_seq_one_letter_code_can ;QQMGRGSMCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDE VTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-(4-methoxy-3-methylphenyl)propanoic acid' ZGB 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 GLN n 1 3 MET n 1 4 GLY n 1 5 ARG n 1 6 GLY n 1 7 SER n 1 8 MET n 1 9 CYS n 1 10 ASP n 1 11 ALA n 1 12 PHE n 1 13 VAL n 1 14 GLY n 1 15 THR n 1 16 TRP n 1 17 LYS n 1 18 LEU n 1 19 VAL n 1 20 SER n 1 21 SER n 1 22 GLU n 1 23 ASN n 1 24 PHE n 1 25 ASP n 1 26 ASP n 1 27 TYR n 1 28 MET n 1 29 LYS n 1 30 GLU n 1 31 VAL n 1 32 GLY n 1 33 VAL n 1 34 GLY n 1 35 PHE n 1 36 ALA n 1 37 THR n 1 38 ARG n 1 39 LYS n 1 40 VAL n 1 41 ALA n 1 42 GLY n 1 43 MET n 1 44 ALA n 1 45 LYS n 1 46 PRO n 1 47 ASN n 1 48 MET n 1 49 ILE n 1 50 ILE n 1 51 SER n 1 52 VAL n 1 53 ASN n 1 54 GLY n 1 55 ASP n 1 56 VAL n 1 57 ILE n 1 58 THR n 1 59 ILE n 1 60 LYS n 1 61 SER n 1 62 GLU n 1 63 SER n 1 64 THR n 1 65 PHE n 1 66 LYS n 1 67 ASN n 1 68 THR n 1 69 GLU n 1 70 ILE n 1 71 SER n 1 72 PHE n 1 73 ILE n 1 74 LEU n 1 75 GLY n 1 76 GLN n 1 77 GLU n 1 78 PHE n 1 79 ASP n 1 80 GLU n 1 81 VAL n 1 82 THR n 1 83 ALA n 1 84 ASP n 1 85 ASP n 1 86 ARG n 1 87 LYS n 1 88 VAL n 1 89 LYS n 1 90 SER n 1 91 THR n 1 92 ILE n 1 93 THR n 1 94 LEU n 1 95 ASP n 1 96 GLY n 1 97 GLY n 1 98 VAL n 1 99 LEU n 1 100 VAL n 1 101 HIS n 1 102 VAL n 1 103 GLN n 1 104 LYS n 1 105 TRP n 1 106 ASP n 1 107 GLY n 1 108 LYS n 1 109 SER n 1 110 THR n 1 111 THR n 1 112 ILE n 1 113 LYS n 1 114 ARG n 1 115 LYS n 1 116 ARG n 1 117 GLU n 1 118 ASP n 1 119 ASP n 1 120 LYS n 1 121 LEU n 1 122 VAL n 1 123 VAL n 1 124 GLU n 1 125 CYS n 1 126 VAL n 1 127 MET n 1 128 LYS n 1 129 GLY n 1 130 VAL n 1 131 THR n 1 132 SER n 1 133 THR n 1 134 ARG n 1 135 VAL n 1 136 TYR n 1 137 GLU n 1 138 ARG n 1 139 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene FABP4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZGB non-polymer . '3-(4-methoxy-3-methylphenyl)propanoic acid' ? 'C11 H14 O3' 194.227 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 -7 -7 GLN ALA A . n A 1 2 GLN 2 -6 -6 GLN ALA A . n A 1 3 MET 3 -5 -5 MET MET A . n A 1 4 GLY 4 -4 -4 GLY GLY A . n A 1 5 ARG 5 -3 -3 ARG ARG A . n A 1 6 GLY 6 -2 -2 GLY GLY A . n A 1 7 SER 7 -1 -1 SER SER A . n A 1 8 MET 8 0 0 MET MET A . n A 1 9 CYS 9 1 1 CYS CYS A . n A 1 10 ASP 10 2 2 ASP ASP A . n A 1 11 ALA 11 3 3 ALA ALA A . n A 1 12 PHE 12 4 4 PHE PHE A . n A 1 13 VAL 13 5 5 VAL VAL A . n A 1 14 GLY 14 6 6 GLY GLY A . n A 1 15 THR 15 7 7 THR THR A . n A 1 16 TRP 16 8 8 TRP TRP A . n A 1 17 LYS 17 9 9 LYS LYS A . n A 1 18 LEU 18 10 10 LEU LEU A . n A 1 19 VAL 19 11 11 VAL VAL A . n A 1 20 SER 20 12 12 SER SER A . n A 1 21 SER 21 13 13 SER SER A . n A 1 22 GLU 22 14 14 GLU GLU A . n A 1 23 ASN 23 15 15 ASN ASN A . n A 1 24 PHE 24 16 16 PHE PHE A . n A 1 25 ASP 25 17 17 ASP ASP A . n A 1 26 ASP 26 18 18 ASP ASP A . n A 1 27 TYR 27 19 19 TYR TYR A . n A 1 28 MET 28 20 20 MET MET A . n A 1 29 LYS 29 21 21 LYS LYS A . n A 1 30 GLU 30 22 22 GLU GLU A . n A 1 31 VAL 31 23 23 VAL VAL A . n A 1 32 GLY 32 24 24 GLY GLY A . n A 1 33 VAL 33 25 25 VAL VAL A . n A 1 34 GLY 34 26 26 GLY GLY A . n A 1 35 PHE 35 27 27 PHE PHE A . n A 1 36 ALA 36 28 28 ALA ALA A . n A 1 37 THR 37 29 29 THR THR A . n A 1 38 ARG 38 30 30 ARG ARG A . n A 1 39 LYS 39 31 31 LYS LYS A . n A 1 40 VAL 40 32 32 VAL VAL A . n A 1 41 ALA 41 33 33 ALA ALA A . n A 1 42 GLY 42 34 34 GLY GLY A . n A 1 43 MET 43 35 35 MET MET A . n A 1 44 ALA 44 36 36 ALA ALA A . n A 1 45 LYS 45 37 37 LYS LYS A . n A 1 46 PRO 46 38 38 PRO PRO A . n A 1 47 ASN 47 39 39 ASN ASN A . n A 1 48 MET 48 40 40 MET MET A . n A 1 49 ILE 49 41 41 ILE ILE A . n A 1 50 ILE 50 42 42 ILE ILE A . n A 1 51 SER 51 43 43 SER SER A . n A 1 52 VAL 52 44 44 VAL VAL A . n A 1 53 ASN 53 45 45 ASN ASN A . n A 1 54 GLY 54 46 46 GLY GLY A . n A 1 55 ASP 55 47 47 ASP ASP A . n A 1 56 VAL 56 48 48 VAL VAL A . n A 1 57 ILE 57 49 49 ILE ILE A . n A 1 58 THR 58 50 50 THR THR A . n A 1 59 ILE 59 51 51 ILE ILE A . n A 1 60 LYS 60 52 52 LYS LYS A . n A 1 61 SER 61 53 53 SER SER A . n A 1 62 GLU 62 54 54 GLU GLU A . n A 1 63 SER 63 55 55 SER SER A . n A 1 64 THR 64 56 56 THR THR A . n A 1 65 PHE 65 57 57 PHE PHE A . n A 1 66 LYS 66 58 58 LYS LYS A . n A 1 67 ASN 67 59 59 ASN ASN A . n A 1 68 THR 68 60 60 THR THR A . n A 1 69 GLU 69 61 61 GLU GLU A . n A 1 70 ILE 70 62 62 ILE ILE A . n A 1 71 SER 71 63 63 SER SER A . n A 1 72 PHE 72 64 64 PHE PHE A . n A 1 73 ILE 73 65 65 ILE ILE A . n A 1 74 LEU 74 66 66 LEU LEU A . n A 1 75 GLY 75 67 67 GLY GLY A . n A 1 76 GLN 76 68 68 GLN GLN A . n A 1 77 GLU 77 69 69 GLU GLU A . n A 1 78 PHE 78 70 70 PHE PHE A . n A 1 79 ASP 79 71 71 ASP ASP A . n A 1 80 GLU 80 72 72 GLU GLU A . n A 1 81 VAL 81 73 73 VAL VAL A . n A 1 82 THR 82 74 74 THR THR A . n A 1 83 ALA 83 75 75 ALA ALA A . n A 1 84 ASP 84 76 76 ASP ASP A . n A 1 85 ASP 85 77 77 ASP ASP A . n A 1 86 ARG 86 78 78 ARG ARG A . n A 1 87 LYS 87 79 79 LYS LYS A . n A 1 88 VAL 88 80 80 VAL VAL A . n A 1 89 LYS 89 81 81 LYS LYS A . n A 1 90 SER 90 82 82 SER SER A . n A 1 91 THR 91 83 83 THR THR A . n A 1 92 ILE 92 84 84 ILE ILE A . n A 1 93 THR 93 85 85 THR THR A . n A 1 94 LEU 94 86 86 LEU LEU A . n A 1 95 ASP 95 87 87 ASP ASP A . n A 1 96 GLY 96 88 88 GLY GLY A . n A 1 97 GLY 97 89 89 GLY GLY A . n A 1 98 VAL 98 90 90 VAL VAL A . n A 1 99 LEU 99 91 91 LEU LEU A . n A 1 100 VAL 100 92 92 VAL VAL A . n A 1 101 HIS 101 93 93 HIS HIS A . n A 1 102 VAL 102 94 94 VAL VAL A . n A 1 103 GLN 103 95 95 GLN GLN A . n A 1 104 LYS 104 96 96 LYS LYS A . n A 1 105 TRP 105 97 97 TRP TRP A . n A 1 106 ASP 106 98 98 ASP ASP A . n A 1 107 GLY 107 99 99 GLY GLY A . n A 1 108 LYS 108 100 100 LYS LYS A . n A 1 109 SER 109 101 101 SER SER A . n A 1 110 THR 110 102 102 THR THR A . n A 1 111 THR 111 103 103 THR THR A . n A 1 112 ILE 112 104 104 ILE ILE A . n A 1 113 LYS 113 105 105 LYS LYS A . n A 1 114 ARG 114 106 106 ARG ARG A . n A 1 115 LYS 115 107 107 LYS LYS A . n A 1 116 ARG 116 108 108 ARG ARG A . n A 1 117 GLU 117 109 109 GLU GLU A . n A 1 118 ASP 118 110 110 ASP ASP A . n A 1 119 ASP 119 111 111 ASP ASP A . n A 1 120 LYS 120 112 112 LYS LYS A . n A 1 121 LEU 121 113 113 LEU LEU A . n A 1 122 VAL 122 114 114 VAL VAL A . n A 1 123 VAL 123 115 115 VAL VAL A . n A 1 124 GLU 124 116 116 GLU GLU A . n A 1 125 CYS 125 117 117 CYS CYS A . n A 1 126 VAL 126 118 118 VAL VAL A . n A 1 127 MET 127 119 119 MET MET A . n A 1 128 LYS 128 120 120 LYS LYS A . n A 1 129 GLY 129 121 121 GLY GLY A . n A 1 130 VAL 130 122 122 VAL VAL A . n A 1 131 THR 131 123 123 THR THR A . n A 1 132 SER 132 124 124 SER SER A . n A 1 133 THR 133 125 125 THR THR A . n A 1 134 ARG 134 126 126 ARG ARG A . n A 1 135 VAL 135 127 127 VAL VAL A . n A 1 136 TYR 136 128 128 TYR TYR A . n A 1 137 GLU 137 129 129 GLU GLU A . n A 1 138 ARG 138 130 130 ARG ARG A . n A 1 139 ALA 139 131 131 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZGB 1 133 1 ZGB ZGB A . C 3 HOH 1 134 134 HOH HOH A . C 3 HOH 2 135 135 HOH HOH A . C 3 HOH 3 136 136 HOH HOH A . C 3 HOH 4 137 137 HOH HOH A . C 3 HOH 5 138 1 HOH HOH A . C 3 HOH 6 139 139 HOH HOH A . C 3 HOH 7 140 140 HOH HOH A . C 3 HOH 8 141 2 HOH HOH A . C 3 HOH 9 142 142 HOH HOH A . C 3 HOH 10 143 143 HOH HOH A . C 3 HOH 11 144 144 HOH HOH A . C 3 HOH 12 145 145 HOH HOH A . C 3 HOH 13 146 146 HOH HOH A . C 3 HOH 14 147 147 HOH HOH A . C 3 HOH 15 148 3 HOH HOH A . C 3 HOH 16 149 149 HOH HOH A . C 3 HOH 17 150 150 HOH HOH A . C 3 HOH 18 151 151 HOH HOH A . C 3 HOH 19 152 152 HOH HOH A . C 3 HOH 20 153 153 HOH HOH A . C 3 HOH 21 154 154 HOH HOH A . C 3 HOH 22 155 155 HOH HOH A . C 3 HOH 23 156 156 HOH HOH A . C 3 HOH 24 157 157 HOH HOH A . C 3 HOH 25 158 158 HOH HOH A . C 3 HOH 26 159 159 HOH HOH A . C 3 HOH 27 160 4 HOH HOH A . C 3 HOH 28 161 161 HOH HOH A . C 3 HOH 29 162 162 HOH HOH A . C 3 HOH 30 163 163 HOH HOH A . C 3 HOH 31 164 164 HOH HOH A . C 3 HOH 32 165 165 HOH HOH A . C 3 HOH 33 166 166 HOH HOH A . C 3 HOH 34 167 5 HOH HOH A . C 3 HOH 35 168 168 HOH HOH A . C 3 HOH 36 169 169 HOH HOH A . C 3 HOH 37 170 170 HOH HOH A . C 3 HOH 38 171 171 HOH HOH A . C 3 HOH 39 172 172 HOH HOH A . C 3 HOH 40 173 173 HOH HOH A . C 3 HOH 41 174 174 HOH HOH A . C 3 HOH 42 175 175 HOH HOH A . C 3 HOH 43 176 176 HOH HOH A . C 3 HOH 44 177 177 HOH HOH A . C 3 HOH 45 178 178 HOH HOH A . C 3 HOH 46 179 179 HOH HOH A . C 3 HOH 47 180 180 HOH HOH A . C 3 HOH 48 181 181 HOH HOH A . C 3 HOH 49 182 182 HOH HOH A . C 3 HOH 50 183 183 HOH HOH A . C 3 HOH 51 184 184 HOH HOH A . C 3 HOH 52 185 6 HOH HOH A . C 3 HOH 53 186 186 HOH HOH A . C 3 HOH 54 187 187 HOH HOH A . C 3 HOH 55 188 188 HOH HOH A . C 3 HOH 56 189 189 HOH HOH A . C 3 HOH 57 190 7 HOH HOH A . C 3 HOH 58 191 191 HOH HOH A . C 3 HOH 59 192 192 HOH HOH A . C 3 HOH 60 193 193 HOH HOH A . C 3 HOH 61 194 194 HOH HOH A . C 3 HOH 62 195 195 HOH HOH A . C 3 HOH 63 196 8 HOH HOH A . C 3 HOH 64 197 197 HOH HOH A . C 3 HOH 65 198 198 HOH HOH A . C 3 HOH 66 199 199 HOH HOH A . C 3 HOH 67 200 9 HOH HOH A . C 3 HOH 68 201 201 HOH HOH A . C 3 HOH 69 202 202 HOH HOH A . C 3 HOH 70 203 203 HOH HOH A . C 3 HOH 71 204 204 HOH HOH A . C 3 HOH 72 205 10 HOH HOH A . C 3 HOH 73 206 206 HOH HOH A . C 3 HOH 74 207 207 HOH HOH A . C 3 HOH 75 208 208 HOH HOH A . C 3 HOH 76 209 209 HOH HOH A . C 3 HOH 77 210 210 HOH HOH A . C 3 HOH 78 211 211 HOH HOH A . C 3 HOH 79 212 11 HOH HOH A . C 3 HOH 80 213 213 HOH HOH A . C 3 HOH 81 214 214 HOH HOH A . C 3 HOH 82 215 215 HOH HOH A . C 3 HOH 83 216 216 HOH HOH A . C 3 HOH 84 217 217 HOH HOH A . C 3 HOH 85 218 218 HOH HOH A . C 3 HOH 86 219 12 HOH HOH A . C 3 HOH 87 220 220 HOH HOH A . C 3 HOH 88 221 221 HOH HOH A . C 3 HOH 89 222 222 HOH HOH A . C 3 HOH 90 223 13 HOH HOH A . C 3 HOH 91 224 224 HOH HOH A . C 3 HOH 92 225 14 HOH HOH A . C 3 HOH 93 226 226 HOH HOH A . C 3 HOH 94 227 227 HOH HOH A . C 3 HOH 95 228 228 HOH HOH A . C 3 HOH 96 229 229 HOH HOH A . C 3 HOH 97 230 230 HOH HOH A . C 3 HOH 98 231 15 HOH HOH A . C 3 HOH 99 232 16 HOH HOH A . C 3 HOH 100 233 233 HOH HOH A . C 3 HOH 101 234 234 HOH HOH A . C 3 HOH 102 235 235 HOH HOH A . C 3 HOH 103 236 17 HOH HOH A . C 3 HOH 104 237 237 HOH HOH A . C 3 HOH 105 238 238 HOH HOH A . C 3 HOH 106 239 18 HOH HOH A . C 3 HOH 107 240 19 HOH HOH A . C 3 HOH 108 241 20 HOH HOH A . C 3 HOH 109 242 242 HOH HOH A . C 3 HOH 110 243 21 HOH HOH A . C 3 HOH 111 244 22 HOH HOH A . C 3 HOH 112 245 245 HOH HOH A . C 3 HOH 113 246 23 HOH HOH A . C 3 HOH 114 247 24 HOH HOH A . C 3 HOH 115 248 25 HOH HOH A . C 3 HOH 116 249 249 HOH HOH A . C 3 HOH 117 250 26 HOH HOH A . C 3 HOH 118 251 27 HOH HOH A . C 3 HOH 119 252 28 HOH HOH A . C 3 HOH 120 253 30 HOH HOH A . C 3 HOH 121 254 254 HOH HOH A . C 3 HOH 122 255 255 HOH HOH A . C 3 HOH 123 256 256 HOH HOH A . C 3 HOH 124 257 31 HOH HOH A . C 3 HOH 125 258 258 HOH HOH A . C 3 HOH 126 259 259 HOH HOH A . C 3 HOH 127 260 260 HOH HOH A . C 3 HOH 128 261 261 HOH HOH A . C 3 HOH 129 262 262 HOH HOH A . C 3 HOH 130 263 263 HOH HOH A . C 3 HOH 131 264 264 HOH HOH A . C 3 HOH 132 265 265 HOH HOH A . C 3 HOH 133 266 32 HOH HOH A . C 3 HOH 134 267 33 HOH HOH A . C 3 HOH 135 268 34 HOH HOH A . C 3 HOH 136 269 35 HOH HOH A . C 3 HOH 137 270 36 HOH HOH A . C 3 HOH 138 271 37 HOH HOH A . C 3 HOH 139 272 38 HOH HOH A . C 3 HOH 140 273 39 HOH HOH A . C 3 HOH 141 274 40 HOH HOH A . C 3 HOH 142 275 41 HOH HOH A . C 3 HOH 143 276 42 HOH HOH A . C 3 HOH 144 277 43 HOH HOH A . C 3 HOH 145 278 44 HOH HOH A . C 3 HOH 146 279 45 HOH HOH A . C 3 HOH 147 280 46 HOH HOH A . C 3 HOH 148 281 47 HOH HOH A . C 3 HOH 149 282 48 HOH HOH A . C 3 HOH 150 283 49 HOH HOH A . C 3 HOH 151 284 50 HOH HOH A . C 3 HOH 152 285 51 HOH HOH A . C 3 HOH 153 286 52 HOH HOH A . C 3 HOH 154 287 53 HOH HOH A . C 3 HOH 155 288 54 HOH HOH A . C 3 HOH 156 289 55 HOH HOH A . C 3 HOH 157 290 56 HOH HOH A . C 3 HOH 158 291 57 HOH HOH A . C 3 HOH 159 292 58 HOH HOH A . C 3 HOH 160 293 59 HOH HOH A . C 3 HOH 161 294 60 HOH HOH A . C 3 HOH 162 295 61 HOH HOH A . C 3 HOH 163 296 62 HOH HOH A . C 3 HOH 164 297 64 HOH HOH A . C 3 HOH 165 298 65 HOH HOH A . C 3 HOH 166 299 66 HOH HOH A . C 3 HOH 167 300 67 HOH HOH A . C 3 HOH 168 301 68 HOH HOH A . C 3 HOH 169 302 69 HOH HOH A . C 3 HOH 170 303 70 HOH HOH A . C 3 HOH 171 304 71 HOH HOH A . C 3 HOH 172 305 72 HOH HOH A . C 3 HOH 173 306 73 HOH HOH A . C 3 HOH 174 307 74 HOH HOH A . C 3 HOH 175 308 75 HOH HOH A . C 3 HOH 176 309 76 HOH HOH A . C 3 HOH 177 310 77 HOH HOH A . C 3 HOH 178 311 78 HOH HOH A . C 3 HOH 179 312 79 HOH HOH A . C 3 HOH 180 313 80 HOH HOH A . C 3 HOH 181 314 81 HOH HOH A . C 3 HOH 182 315 82 HOH HOH A . C 3 HOH 183 316 83 HOH HOH A . C 3 HOH 184 317 84 HOH HOH A . C 3 HOH 185 318 85 HOH HOH A . C 3 HOH 186 319 86 HOH HOH A . C 3 HOH 187 320 87 HOH HOH A . C 3 HOH 188 321 88 HOH HOH A . C 3 HOH 189 322 89 HOH HOH A . C 3 HOH 190 323 90 HOH HOH A . C 3 HOH 191 324 91 HOH HOH A . C 3 HOH 192 325 92 HOH HOH A . C 3 HOH 193 326 93 HOH HOH A . C 3 HOH 194 327 94 HOH HOH A . C 3 HOH 195 328 95 HOH HOH A . C 3 HOH 196 329 97 HOH HOH A . C 3 HOH 197 330 98 HOH HOH A . C 3 HOH 198 331 99 HOH HOH A . C 3 HOH 199 332 100 HOH HOH A . C 3 HOH 200 333 101 HOH HOH A . C 3 HOH 201 334 102 HOH HOH A . C 3 HOH 202 335 103 HOH HOH A . C 3 HOH 203 336 104 HOH HOH A . C 3 HOH 204 337 105 HOH HOH A . C 3 HOH 205 338 106 HOH HOH A . C 3 HOH 206 339 107 HOH HOH A . C 3 HOH 207 340 108 HOH HOH A . C 3 HOH 208 341 109 HOH HOH A . C 3 HOH 209 342 110 HOH HOH A . C 3 HOH 210 343 111 HOH HOH A . C 3 HOH 211 344 112 HOH HOH A . C 3 HOH 212 345 113 HOH HOH A . C 3 HOH 213 346 114 HOH HOH A . C 3 HOH 214 347 115 HOH HOH A . C 3 HOH 215 348 116 HOH HOH A . C 3 HOH 216 349 117 HOH HOH A . C 3 HOH 217 350 118 HOH HOH A . C 3 HOH 218 351 119 HOH HOH A . C 3 HOH 219 352 120 HOH HOH A . C 3 HOH 220 353 121 HOH HOH A . C 3 HOH 221 354 122 HOH HOH A . C 3 HOH 222 355 123 HOH HOH A . C 3 HOH 223 356 124 HOH HOH A . C 3 HOH 224 357 125 HOH HOH A . C 3 HOH 225 358 126 HOH HOH A . C 3 HOH 226 359 127 HOH HOH A . C 3 HOH 227 360 130 HOH HOH A . C 3 HOH 228 361 131 HOH HOH A . C 3 HOH 229 362 132 HOH HOH A . C 3 HOH 230 363 133 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN -7 ? CG ? A GLN 1 CG 2 1 Y 1 A GLN -7 ? CD ? A GLN 1 CD 3 1 Y 1 A GLN -7 ? OE1 ? A GLN 1 OE1 4 1 Y 1 A GLN -7 ? NE2 ? A GLN 1 NE2 5 1 Y 1 A GLN -6 ? CG ? A GLN 2 CG 6 1 Y 1 A GLN -6 ? CD ? A GLN 2 CD 7 1 Y 1 A GLN -6 ? OE1 ? A GLN 2 OE1 8 1 Y 1 A GLN -6 ? NE2 ? A GLN 2 NE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 AMoRE . ? program 'Jorge Navaza' ccp4@ccp4.ac.uk phasing http://www.ccp4.ac.uk/ Fortran_77 ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _cell.entry_id 3P6D _cell.length_a 32.244 _cell.length_b 53.392 _cell.length_c 75.015 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3P6D _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3P6D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 41.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.6 M sodium citrate, pH 6.5, vapor diffusion, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-02-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 3P6D _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.060 _reflns.number_obs 59374 _reflns.number_all ? _reflns.percent_possible_obs 99.400 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.400 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.060 1.100 98.100 0.268 ? ? 6.000 ? ? ? ? ? ? 1 1 1.100 1.140 99.600 0.209 ? ? 6.700 ? ? ? ? ? ? 2 1 1.140 1.190 99.800 0.173 ? ? 6.800 ? ? ? ? ? ? 3 1 1.190 1.260 100.000 0.148 ? ? 6.800 ? ? ? ? ? ? 4 1 1.260 1.340 100.000 0.126 ? ? 6.900 ? ? ? ? ? ? 5 1 1.340 1.440 100.000 0.115 ? ? 6.900 ? ? ? ? ? ? 6 1 1.440 1.580 100.000 0.106 ? ? 6.900 ? ? ? ? ? ? 7 1 1.580 1.810 100.000 0.104 ? ? 6.900 ? ? ? ? ? ? 8 1 1.810 2.280 99.900 0.091 ? ? 6.900 ? ? ? ? ? ? 9 1 2.282 50.000 97.200 0.103 ? ? 6.500 ? ? ? ? ? ? 10 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3P6D _refine.ls_number_reflns_obs 59310 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.50 _refine.ls_d_res_high 1.06 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs 0.141 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.140 _refine.ls_R_factor_R_free 0.161 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 2995 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.500 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.964 _refine.B_iso_mean 16.90 _refine.aniso_B[1][1] -0.86000 _refine.aniso_B[2][2] 0.53000 _refine.aniso_B[3][3] 0.33000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.017 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.719 _refine.overall_SU_R_Cruickshank_DPI 0.0280 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1072 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 230 _refine_hist.number_atoms_total 1316 _refine_hist.d_res_high 1.06 _refine_hist.d_res_low 43.50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.021 0.022 ? 1263 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 862 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.016 1.979 ? 1714 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.006 3.002 ? 2105 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.436 5.000 ? 169 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.084 24.902 ? 51 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.623 15.000 ? 243 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.120 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.111 0.200 ? 192 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 1438 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.004 0.020 ? 245 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.138 1.500 ? 777 'X-RAY DIFFRACTION' ? r_mcbond_other 0.618 1.500 ? 327 'X-RAY DIFFRACTION' ? r_mcangle_it 3.316 2.000 ? 1273 'X-RAY DIFFRACTION' ? r_scbond_it 4.474 3.000 ? 486 'X-RAY DIFFRACTION' ? r_scangle_it 6.291 4.500 ? 435 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.793 3.000 ? 2125 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.06 _refine_ls_shell.d_res_low 1.09 _refine_ls_shell.number_reflns_R_work 3996 _refine_ls_shell.R_factor_R_work 0.2010 _refine_ls_shell.percent_reflns_obs 98.10 _refine_ls_shell.R_factor_R_free 0.2180 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 231 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3P6D _struct.title 'Human adipocyte lipid-binding protein FABP4 in complex with 3-(4-methoxy-3-methylphenyl) propionic acid' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3P6D _struct_keywords.text 'lipocalin, beta barrel, fatty acid binding protein, LIPID BINDING PROTEIN' _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FABP4_HUMAN _struct_ref.pdbx_db_accession P15090 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRK VKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYERA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3P6D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 139 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P15090 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 132 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 0 _struct_ref_seq.pdbx_auth_seq_align_end 131 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3P6D GLN A 1 ? UNP P15090 ? ? 'expression tag' -7 1 1 3P6D GLN A 2 ? UNP P15090 ? ? 'expression tag' -6 2 1 3P6D MET A 3 ? UNP P15090 ? ? 'expression tag' -5 3 1 3P6D GLY A 4 ? UNP P15090 ? ? 'expression tag' -4 4 1 3P6D ARG A 5 ? UNP P15090 ? ? 'expression tag' -3 5 1 3P6D GLY A 6 ? UNP P15090 ? ? 'expression tag' -2 6 1 3P6D SER A 7 ? UNP P15090 ? ? 'expression tag' -1 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 7 ? VAL A 13 ? SER A -1 VAL A 5 5 ? 7 HELX_P HELX_P2 2 ASN A 23 ? GLY A 32 ? ASN A 15 GLY A 24 1 ? 10 HELX_P HELX_P3 3 GLY A 34 ? ALA A 44 ? GLY A 26 ALA A 36 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 68 ? PHE A 72 ? THR A 60 PHE A 64 A 2 VAL A 56 ? GLU A 62 ? VAL A 48 GLU A 54 A 3 ASN A 47 ? ASN A 53 ? ASN A 39 ASN A 45 A 4 GLY A 14 ? GLU A 22 ? GLY A 6 GLU A 14 A 5 VAL A 130 ? ARG A 138 ? VAL A 122 ARG A 130 A 6 LYS A 120 ? MET A 127 ? LYS A 112 MET A 119 A 7 LYS A 108 ? GLU A 117 ? LYS A 100 GLU A 109 A 8 VAL A 98 ? TRP A 105 ? VAL A 90 TRP A 97 A 9 LYS A 87 ? ASP A 95 ? LYS A 79 ASP A 87 A 10 PHE A 78 ? VAL A 81 ? PHE A 70 VAL A 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 72 ? O PHE A 64 N ILE A 57 ? N ILE A 49 A 2 3 O GLU A 62 ? O GLU A 54 N ASN A 47 ? N ASN A 39 A 3 4 O MET A 48 ? O MET A 40 N TRP A 16 ? N TRP A 8 A 4 5 N VAL A 19 ? N VAL A 11 O VAL A 135 ? O VAL A 127 A 5 6 O ARG A 134 ? O ARG A 126 N VAL A 123 ? N VAL A 115 A 6 7 O VAL A 126 ? O VAL A 118 N THR A 111 ? N THR A 103 A 7 8 O LYS A 108 ? O LYS A 100 N TRP A 105 ? N TRP A 97 A 8 9 O VAL A 100 ? O VAL A 92 N THR A 93 ? N THR A 85 A 9 10 O SER A 90 ? O SER A 82 N PHE A 78 ? N PHE A 70 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ZGB _struct_site.pdbx_auth_seq_id 133 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 12 _struct_site.details 'BINDING SITE FOR RESIDUE ZGB A 133' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 PHE A 24 ? PHE A 16 . ? 1_555 ? 2 AC1 12 MET A 28 ? MET A 20 . ? 1_555 ? 3 AC1 12 VAL A 33 ? VAL A 25 . ? 1_555 ? 4 AC1 12 ALA A 41 ? ALA A 33 . ? 1_555 ? 5 AC1 12 PHE A 65 ? PHE A 57 . ? 1_555 ? 6 AC1 12 ALA A 83 ? ALA A 75 . ? 1_555 ? 7 AC1 12 ASP A 84 ? ASP A 76 . ? 1_555 ? 8 AC1 12 ARG A 86 ? ARG A 78 . ? 1_555 ? 9 AC1 12 ARG A 134 ? ARG A 126 . ? 1_555 ? 10 AC1 12 TYR A 136 ? TYR A 128 . ? 1_555 ? 11 AC1 12 HOH C . ? HOH A 281 . ? 1_555 ? 12 AC1 12 HOH C . ? HOH A 319 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 69 ? ? O A HOH 183 ? ? 1.82 2 1 O A HOH 314 ? ? O A HOH 318 ? ? 1.97 3 1 O A HOH 137 ? ? O A HOH 269 ? ? 2.01 4 1 O A HOH 182 ? ? O A HOH 357 ? ? 2.10 5 1 O A VAL 73 ? B O A HOH 295 ? ? 2.13 6 1 O A HOH 206 ? ? O A HOH 233 ? ? 2.15 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 302 ? ? 1_555 O A HOH 314 ? ? 3_555 1.73 2 1 O A HOH 302 ? ? 1_555 O A HOH 348 ? ? 3_655 2.14 3 1 O A HOH 228 ? ? 1_555 O A HOH 317 ? ? 3_645 2.17 4 1 O A HOH 209 ? ? 1_555 O A HOH 222 ? ? 4_555 2.18 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 126 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 126 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 126 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.78 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.48 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 57 ? A -87.35 -70.89 2 1 PHE A 57 ? B -80.30 -74.70 3 1 ASP A 110 ? ? 54.49 -133.93 4 1 LYS A 120 ? A 48.32 -123.45 # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 ZGB C1 C N N 391 ZGB O1 O N N 392 ZGB C2 C Y N 393 ZGB O2 O N N 394 ZGB C3 C Y N 395 ZGB O3 O N N 396 ZGB C4 C Y N 397 ZGB C5 C N N 398 ZGB C6 C Y N 399 ZGB C7 C Y N 400 ZGB C8 C Y N 401 ZGB C9 C N N 402 ZGB C10 C N N 403 ZGB C11 C N N 404 ZGB H1 H N N 405 ZGB H1A H N N 406 ZGB H1B H N N 407 ZGB H3 H N N 408 ZGB HO3 H N N 409 ZGB H5 H N N 410 ZGB H5A H N N 411 ZGB H5B H N N 412 ZGB H6 H N N 413 ZGB H7 H N N 414 ZGB H9 H N N 415 ZGB H9A H N N 416 ZGB H10 H N N 417 ZGB H10A H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 ZGB C2 C1 sing N N 376 ZGB C1 H1 sing N N 377 ZGB C1 H1A sing N N 378 ZGB C1 H1B sing N N 379 ZGB C4 O1 sing N N 380 ZGB O1 C5 sing N N 381 ZGB C3 C2 doub Y N 382 ZGB C2 C4 sing Y N 383 ZGB O2 C11 doub N N 384 ZGB C8 C3 sing Y N 385 ZGB C3 H3 sing N N 386 ZGB O3 C11 sing N N 387 ZGB O3 HO3 sing N N 388 ZGB C6 C4 doub Y N 389 ZGB C5 H5 sing N N 390 ZGB C5 H5A sing N N 391 ZGB C5 H5B sing N N 392 ZGB C7 C6 sing Y N 393 ZGB C6 H6 sing N N 394 ZGB C8 C7 doub Y N 395 ZGB C7 H7 sing N N 396 ZGB C9 C8 sing N N 397 ZGB C10 C9 sing N N 398 ZGB C9 H9 sing N N 399 ZGB C9 H9A sing N N 400 ZGB C11 C10 sing N N 401 ZGB C10 H10 sing N N 402 ZGB C10 H10A sing N N 403 # _atom_sites.entry_id 3P6D _atom_sites.fract_transf_matrix[1][1] 0.031014 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018729 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013331 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_