HEADER UNKNOWN FUNCTION 22-OCT-10 3PDG TITLE STRUCTURES OF CLOSTRIDIUM THERMOCELLUM CBHA FIBRONECTIN(III)-LIKE TITLE 2 MODULES COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRONECTIN(III)-LIKE MODULE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 823-911; COMPND 5 SYNONYM: GLYCOSIDE HYDROLASE, FAMILY 9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 203119; SOURCE 4 STRAIN: ATCC 27405; SOURCE 5 GENE: CTHE_0413; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS CBHA, BETA-SANDWICH, CELLULOSOME, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR P.M.ALAHUHTA,V.V.LUNIN REVDAT 3 21-FEB-24 3PDG 1 REMARK SEQADV LINK REVDAT 2 09-MAY-12 3PDG 1 JRNL REVDAT 1 23-NOV-11 3PDG 0 JRNL AUTH R.BRUNECKY,M.ALAHUHTA,Y.J.BOMBLE,Q.XU,J.O.BAKER,S.Y.DING, JRNL AUTH 2 M.E.HIMMEL,V.V.LUNIN JRNL TITL STRUCTURE AND FUNCTION OF THE CLOSTRIDIUM THERMOCELLUM JRNL TITL 2 CELLOBIOHYDROLASE A X1-MODULE REPEAT: ENHANCEMENT THROUGH JRNL TITL 3 STABILIZATION OF THE CBHA COMPLEX. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 68 292 2012 JRNL REFN ISSN 0907-4449 JRNL PMID 22349231 JRNL DOI 10.1107/S0907444912001680 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 10241 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 518 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 686 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.4010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 669 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 93 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.20000 REMARK 3 B22 (A**2) : 1.20000 REMARK 3 B33 (A**2) : -2.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.139 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.121 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.802 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 732 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 478 ; 0.011 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1007 ; 1.980 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1190 ; 0.979 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 102 ; 6.648 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 22 ;34.740 ;24.091 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 125 ;16.268 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;20.876 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 127 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 833 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 135 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 490 ; 1.025 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 194 ; 0.391 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 811 ; 1.538 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 242 ; 2.936 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 196 ; 4.220 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 10 REMARK 3 ORIGIN FOR THE GROUP (A): -19.8059 -13.8742 -21.5958 REMARK 3 T TENSOR REMARK 3 T11: 0.1021 T22: 0.0963 REMARK 3 T33: 0.1218 T12: -0.0008 REMARK 3 T13: -0.0097 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 2.5003 L22: 2.2000 REMARK 3 L33: 6.9311 L12: 0.1696 REMARK 3 L13: -0.9193 L23: -1.4595 REMARK 3 S TENSOR REMARK 3 S11: -0.0996 S12: 0.1993 S13: -0.0570 REMARK 3 S21: -0.1728 S22: 0.0488 S23: -0.0784 REMARK 3 S31: 0.1394 S32: -0.1098 S33: 0.0508 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 19 REMARK 3 ORIGIN FOR THE GROUP (A): -12.4502 -4.3694 -30.8961 REMARK 3 T TENSOR REMARK 3 T11: 0.1657 T22: 0.1815 REMARK 3 T33: 0.1751 T12: 0.0103 REMARK 3 T13: -0.0099 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.5238 L22: 1.1384 REMARK 3 L33: 4.5111 L12: 0.9151 REMARK 3 L13: -1.1185 L23: 1.3338 REMARK 3 S TENSOR REMARK 3 S11: -0.0001 S12: 0.1335 S13: 0.1340 REMARK 3 S21: -0.1650 S22: 0.0292 S23: 0.0344 REMARK 3 S31: -0.1878 S32: -0.0326 S33: -0.0291 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 42 REMARK 3 ORIGIN FOR THE GROUP (A): -18.1951 -9.9884 -11.6557 REMARK 3 T TENSOR REMARK 3 T11: 0.1142 T22: 0.0654 REMARK 3 T33: 0.1124 T12: 0.0129 REMARK 3 T13: -0.0119 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 2.6674 L22: 0.9416 REMARK 3 L33: 3.6880 L12: 0.3732 REMARK 3 L13: -2.0055 L23: -0.6383 REMARK 3 S TENSOR REMARK 3 S11: -0.0514 S12: -0.0308 S13: -0.0755 REMARK 3 S21: -0.0562 S22: 0.0387 S23: -0.0645 REMARK 3 S31: 0.0095 S32: 0.0227 S33: 0.0126 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 43 A 52 REMARK 3 ORIGIN FOR THE GROUP (A): -20.7878 -3.7743 -12.5302 REMARK 3 T TENSOR REMARK 3 T11: 0.1291 T22: 0.1555 REMARK 3 T33: 0.1698 T12: -0.0003 REMARK 3 T13: 0.0007 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 0.3933 L22: 1.6486 REMARK 3 L33: 2.1944 L12: 0.6250 REMARK 3 L13: 0.0694 L23: -0.1136 REMARK 3 S TENSOR REMARK 3 S11: 0.0411 S12: -0.1313 S13: 0.1560 REMARK 3 S21: 0.0985 S22: -0.0274 S23: 0.0697 REMARK 3 S31: -0.1305 S32: -0.0352 S33: -0.0137 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 53 A 66 REMARK 3 ORIGIN FOR THE GROUP (A): -9.2942 -5.8084 -23.3337 REMARK 3 T TENSOR REMARK 3 T11: 0.1221 T22: 0.1590 REMARK 3 T33: 0.2016 T12: -0.0075 REMARK 3 T13: -0.0304 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 2.3626 L22: 0.9448 REMARK 3 L33: 2.4036 L12: 0.4037 REMARK 3 L13: -1.9597 L23: 0.2563 REMARK 3 S TENSOR REMARK 3 S11: 0.0841 S12: 0.1455 S13: 0.2413 REMARK 3 S21: -0.1538 S22: -0.0154 S23: -0.1057 REMARK 3 S31: -0.2895 S32: -0.0523 S33: -0.0687 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 67 A 75 REMARK 3 ORIGIN FOR THE GROUP (A): -18.5661 -14.1076 -4.1231 REMARK 3 T TENSOR REMARK 3 T11: 0.0831 T22: 0.0329 REMARK 3 T33: 0.0316 T12: -0.0238 REMARK 3 T13: 0.0200 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.5264 L22: 1.1146 REMARK 3 L33: 0.2258 L12: 0.1052 REMARK 3 L13: 0.1694 L23: 0.3065 REMARK 3 S TENSOR REMARK 3 S11: 0.0049 S12: -0.0134 S13: 0.1067 REMARK 3 S21: 0.0267 S22: -0.0016 S23: -0.0317 REMARK 3 S31: -0.0822 S32: 0.0318 S33: -0.0033 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 76 A 85 REMARK 3 ORIGIN FOR THE GROUP (A): -13.3842 -15.5602 -17.3108 REMARK 3 T TENSOR REMARK 3 T11: 0.0848 T22: 0.0841 REMARK 3 T33: 0.1105 T12: -0.0010 REMARK 3 T13: -0.0087 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.5353 L22: 1.2605 REMARK 3 L33: 8.1304 L12: 0.1190 REMARK 3 L13: -2.2919 L23: -1.5566 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: 0.0042 S13: 0.0496 REMARK 3 S21: -0.0152 S22: -0.0091 S23: -0.0774 REMARK 3 S31: -0.0909 S32: 0.2026 S33: 0.0198 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 86 A 91 REMARK 3 ORIGIN FOR THE GROUP (A): -8.2163 -5.4904 -38.2226 REMARK 3 T TENSOR REMARK 3 T11: 0.1939 T22: 0.1900 REMARK 3 T33: 0.2275 T12: 0.0221 REMARK 3 T13: -0.0357 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 0.2248 L22: 0.2131 REMARK 3 L33: 1.6472 L12: 0.0662 REMARK 3 L13: -0.3764 L23: -0.5198 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: 0.1401 S13: -0.1340 REMARK 3 S21: -0.1634 S22: 0.0348 S23: 0.0800 REMARK 3 S31: 0.3004 S32: -0.1218 S33: -0.0328 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3PDG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062243. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : HELIOS MIRRORS REMARK 200 OPTICS : HELIOS MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : PROTEUM PLUS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10862 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.67 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.51 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.28170 REMARK 200 FOR SHELL : 2.720 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9 M SODIUM MALONATE, PH 6.0, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.15800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.15800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.37800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.15800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.15800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 58.37800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.15800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.15800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 58.37800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.15800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.15800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 58.37800 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A 100 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 92 REMARK 465 HIS A 93 REMARK 465 HIS A 94 REMARK 465 HIS A 95 REMARK 465 HIS A 96 REMARK 465 HIS A 97 REMARK 465 HIS A 98 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 44 -178.25 -174.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 99 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 46 OD2 REMARK 620 2 ASP A 46 OD1 46.0 REMARK 620 3 THR A 48 O 92.4 67.2 REMARK 620 4 THR A 48 O 89.8 68.6 5.8 REMARK 620 5 PRO A 50 O 96.9 132.0 90.4 85.6 REMARK 620 6 HOH A 110 O 88.7 57.8 98.5 103.7 169.3 REMARK 620 7 HOH A 152 O 87.9 116.8 174.1 168.6 83.6 87.4 REMARK 620 8 HOH A 190 O 160.9 115.1 78.4 82.5 99.9 76.3 102.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 99 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 100 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PDD RELATED DB: PDB REMARK 900 RELATED ID: 3PBZ RELATED DB: PDB DBREF 3PDG A 2 90 UNP A3DCH2 A3DCH2_CLOTH 823 911 SEQADV 3PDG MET A 1 UNP A3DCH2 INITIATING METHIONINE SEQADV 3PDG LEU A 91 UNP A3DCH2 EXPRESSION TAG SEQADV 3PDG GLU A 92 UNP A3DCH2 EXPRESSION TAG SEQADV 3PDG HIS A 93 UNP A3DCH2 EXPRESSION TAG SEQADV 3PDG HIS A 94 UNP A3DCH2 EXPRESSION TAG SEQADV 3PDG HIS A 95 UNP A3DCH2 EXPRESSION TAG SEQADV 3PDG HIS A 96 UNP A3DCH2 EXPRESSION TAG SEQADV 3PDG HIS A 97 UNP A3DCH2 EXPRESSION TAG SEQADV 3PDG HIS A 98 UNP A3DCH2 EXPRESSION TAG SEQRES 1 A 98 MET VAL THR ILE ASP SER PRO VAL ALA GLY GLU ARG PHE SEQRES 2 A 98 GLU ALA GLY LYS ASP ILE ASN ILE SER ALA THR VAL LYS SEQRES 3 A 98 SER LYS THR PRO VAL SER LYS VAL GLU PHE TYR ASN GLY SEQRES 4 A 98 ASP THR LEU ILE SER SER ASP THR THR ALA PRO TYR THR SEQRES 5 A 98 ALA LYS ILE THR GLY ALA ALA VAL GLY ALA TYR ASN LEU SEQRES 6 A 98 LYS ALA VAL ALA VAL LEU SER ASP GLY ARG ARG ILE GLU SEQRES 7 A 98 SER PRO VAL THR PRO VAL LEU VAL LYS VAL ILE VAL LEU SEQRES 8 A 98 GLU HIS HIS HIS HIS HIS HIS HET NA A 99 1 HET NA A 100 1 HETNAM NA SODIUM ION FORMUL 2 NA 2(NA 1+) FORMUL 4 HOH *93(H2 O) SHEET 1 A 3 VAL A 2 SER A 6 0 SHEET 2 A 3 ILE A 19 VAL A 25 -1 O SER A 22 N SER A 6 SHEET 3 A 3 TYR A 51 ILE A 55 -1 O ALA A 53 N ILE A 21 SHEET 1 B 5 ARG A 12 GLU A 14 0 SHEET 2 B 5 THR A 82 LYS A 87 1 O LYS A 87 N PHE A 13 SHEET 3 B 5 GLY A 61 LEU A 71 -1 N LEU A 65 O THR A 82 SHEET 4 B 5 VAL A 31 ASN A 38 -1 N TYR A 37 O LYS A 66 SHEET 5 B 5 THR A 41 ASP A 46 -1 O ILE A 43 N PHE A 36 SHEET 1 C 4 ARG A 12 GLU A 14 0 SHEET 2 C 4 THR A 82 LYS A 87 1 O LYS A 87 N PHE A 13 SHEET 3 C 4 GLY A 61 LEU A 71 -1 N LEU A 65 O THR A 82 SHEET 4 C 4 ARG A 76 GLU A 78 -1 O ILE A 77 N ALA A 69 LINK OD2 ASP A 46 NA NA A 99 1555 1555 2.36 LINK OD1 ASP A 46 NA NA A 99 1555 1555 3.13 LINK O BTHR A 48 NA NA A 99 1555 1555 2.32 LINK O ATHR A 48 NA NA A 99 1555 1555 2.34 LINK O PRO A 50 NA NA A 99 1555 1555 2.21 LINK NA NA A 99 O HOH A 110 1555 1555 2.37 LINK NA NA A 99 O HOH A 152 1555 1555 2.51 LINK NA NA A 99 O HOH A 190 1555 1555 2.62 LINK NA NA A 100 O HOH A 169 1555 1555 3.12 CISPEP 1 SER A 6 PRO A 7 0 -12.99 CISPEP 2 ALA A 49 PRO A 50 0 -7.81 SITE 1 AC1 6 ASP A 46 THR A 48 PRO A 50 HOH A 110 SITE 2 AC1 6 HOH A 152 HOH A 190 SITE 1 AC2 1 ARG A 75 CRYST1 42.316 42.316 116.756 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023632 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023632 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008565 0.00000