HEADER LIPID TRANSPORT 27-OCT-10 3PF1 TITLE E. COLI FADL ASP348ALA MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: LONG-CHAIN FATTY ACID TRANSPORT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: MATURE FORM (UNP RESIDUES 26-446); COMPND 5 SYNONYM: OUTER MEMBRANE FADL PROTEIN, OUTER MEMBRANE FLP PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B2344, FADL, JW2341, TTR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C43; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBAD KEYWDS OUTER MEMBRANE PROTEIN, OLEATE, OLEIC, BETA BARREL, LIPID TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR B.VANDENBERG,B.W.LEPORE,E.M.HEARN,M.INDIC,D.PATEL REVDAT 4 06-SEP-23 3PF1 1 REMARK SEQADV REVDAT 3 06-JUL-11 3PF1 1 JRNL REVDAT 2 01-JUN-11 3PF1 1 JRNL REVDAT 1 25-MAY-11 3PF1 0 JRNL AUTH B.W.LEPORE,M.INDIC,H.PHAM,E.M.HEARN,D.R.PATEL,B.VAN DEN BERG JRNL TITL FROM THE COVER: LIGAND-GATED DIFFUSION ACROSS THE BACTERIAL JRNL TITL 2 OUTER MEMBRANE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 10121 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 21593406 JRNL DOI 10.1073/PNAS.1018532108 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 39025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.4848 - 6.4997 0.99 2838 150 0.2479 0.2621 REMARK 3 2 6.4997 - 5.1621 1.00 2704 144 0.2267 0.2744 REMARK 3 3 5.1621 - 4.5105 1.00 2666 151 0.1679 0.2044 REMARK 3 4 4.5105 - 4.0985 1.00 2655 134 0.1718 0.2171 REMARK 3 5 4.0985 - 3.8049 1.00 2688 125 0.1997 0.2621 REMARK 3 6 3.8049 - 3.5807 1.00 2640 145 0.2092 0.2732 REMARK 3 7 3.5807 - 3.4015 1.00 2610 141 0.1988 0.2937 REMARK 3 8 3.4015 - 3.2535 1.00 2626 146 0.1962 0.2775 REMARK 3 9 3.2535 - 3.1283 1.00 2599 139 0.1892 0.2658 REMARK 3 10 3.1283 - 3.0204 1.00 2605 153 0.1937 0.2894 REMARK 3 11 3.0204 - 2.9260 1.00 2619 133 0.2193 0.2683 REMARK 3 12 2.9260 - 2.8423 1.00 2599 128 0.2440 0.3646 REMARK 3 13 2.8423 - 2.7675 1.00 2609 150 0.2867 0.3516 REMARK 3 14 2.7675 - 2.7000 0.99 2584 144 0.3406 0.4375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 38.68 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.060 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -12.71050 REMARK 3 B22 (A**2) : -2.63250 REMARK 3 B33 (A**2) : -4.56890 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6936 REMARK 3 ANGLE : 1.133 9361 REMARK 3 CHIRALITY : 0.073 944 REMARK 3 PLANARITY : 0.005 1220 REMARK 3 DIHEDRAL : 16.852 2480 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:424) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1941 -5.9018 21.0332 REMARK 3 T TENSOR REMARK 3 T11: 0.0498 T22: 0.0928 REMARK 3 T33: 0.0917 T12: 0.0072 REMARK 3 T13: -0.0361 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 0.4408 L22: 0.6013 REMARK 3 L33: 0.3153 L12: 0.3268 REMARK 3 L13: 0.0404 L23: 0.1563 REMARK 3 S TENSOR REMARK 3 S11: -0.0364 S12: -0.0503 S13: 0.1075 REMARK 3 S21: -0.0109 S22: -0.0388 S23: 0.0844 REMARK 3 S31: -0.1379 S32: -0.0399 S33: 0.0620 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND (RESID 1:424) REMARK 3 ORIGIN FOR THE GROUP (A): -34.8391 -7.6020 -23.0012 REMARK 3 T TENSOR REMARK 3 T11: 0.0739 T22: 0.0636 REMARK 3 T33: 0.1006 T12: -0.0205 REMARK 3 T13: 0.0133 T23: 0.0598 REMARK 3 L TENSOR REMARK 3 L11: 0.4572 L22: 0.3730 REMARK 3 L33: 0.2254 L12: -0.2903 REMARK 3 L13: 0.0068 L23: -0.1075 REMARK 3 S TENSOR REMARK 3 S11: -0.0256 S12: -0.0516 S13: 0.2363 REMARK 3 S21: -0.0398 S22: -0.0190 S23: -0.1317 REMARK 3 S31: -0.1394 S32: -0.0016 S33: 0.0188 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 1:35 OR RESSEQ 45:164 REMARK 3 OR RESSEQ 176:196 OR RESSEQ 198:244 OR REMARK 3 RESSEQ 246:274 OR RESSEQ 276:308 OR REMARK 3 RESSEQ 310:316 OR RESSEQ 318:412 OR REMARK 3 RESSEQ 414:423 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 1:35 OR RESSEQ 45:164 REMARK 3 OR RESSEQ 176:196 OR RESSEQ 198:244 OR REMARK 3 RESSEQ 246:274 OR RESSEQ 276:308 OR REMARK 3 RESSEQ 310:316 OR RESSEQ 318:412 OR REMARK 3 RESSEQ 414:423 ) REMARK 3 ATOM PAIRS NUMBER : 3058 REMARK 3 RMSD : 0.029 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RMS AVERAGE BISO FOR SOLVENT/LIGANDS. REMARK 3 ANISOTROPIC SCALE FACTOR IS REPORTED AS ANISOTROPIC B REMARK 4 REMARK 4 3PF1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-OCT-10. REMARK 100 THE DEPOSITION ID IS D_1000062298. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97981 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL CUT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39050 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : 0.11800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.51400 REMARK 200 R SYM FOR SHELL (I) : 0.51400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1T16 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15-17% PEG 4K 0.2M KCL, PROTEIN REMARK 280 DIALYSED IN 10MM NAOAC 50MM NACL, 10% GLYCEROL 0.4%C8E4, PH 5.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K, PH 6.3 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.44000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.62000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.98500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.62000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.44000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.98500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 24 50.83 -143.03 REMARK 500 ALA A 86 137.28 -170.13 REMARK 500 ASN A 137 -164.55 -166.11 REMARK 500 PRO A 285 -9.49 -55.57 REMARK 500 ASN A 378 48.20 -173.45 REMARK 500 LYS A 379 -22.20 68.06 REMARK 500 ALA B 24 52.96 -146.25 REMARK 500 PRO B 75 154.25 -45.47 REMARK 500 ASN B 89 -169.81 -127.23 REMARK 500 ASP B 110 1.58 -67.63 REMARK 500 ASP B 218 -156.98 -150.71 REMARK 500 PRO B 253 79.80 -68.98 REMARK 500 ASP B 336 -178.91 -174.87 REMARK 500 ASP B 365 151.43 -42.31 REMARK 500 ASN B 378 56.63 -178.11 REMARK 500 LYS B 379 -10.13 57.19 REMARK 500 HIS B 423 144.52 -33.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E A 505 REMARK 610 C8E A 509 REMARK 610 LDA A 515 REMARK 610 LDA A 525 REMARK 610 C8E B 506 REMARK 610 LDA B 510 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA A 525 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 520 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 530 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 535 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T16 RELATED DB: PDB REMARK 900 WILD-TYPE FADL WITH 6XHIS TAG, LDAO, C8E4, ALTERNATE N-TERMINUS REMARK 900 CONFORMATION REMARK 900 RELATED ID: 1T1L RELATED DB: PDB REMARK 900 WILD-TYPE FADL WITH 6XHIS TAG, LDAO ONLY, ALTERNATE N-TERMINUS REMARK 900 CONFORMATION REMARK 900 RELATED ID: 2R89 RELATED DB: PDB REMARK 900 FADL WITH DELETION OF FIRST THREE RESIDUES (DELTA N3), ETC. REMARK 900 RELATED ID: 2R8A RELATED DB: PDB REMARK 900 FADL WITH DELETION OF FIRST EIGHT RESIDUES (DELTA N8), ETC. REMARK 900 RELATED ID: 2R4O RELATED DB: PDB REMARK 900 SOURCE OF ORTHORHOMBIC R-FREE SET FOR FADL DBREF 3PF1 A 1 421 UNP P10384 FADL_ECOLI 26 446 DBREF 3PF1 B 1 421 UNP P10384 FADL_ECOLI 26 446 SEQADV 3PF1 ALA A 348 UNP P10384 ASP 373 ENGINEERED MUTATION SEQADV 3PF1 HIS A 422 UNP P10384 EXPRESSION TAG SEQADV 3PF1 HIS A 423 UNP P10384 EXPRESSION TAG SEQADV 3PF1 HIS A 424 UNP P10384 EXPRESSION TAG SEQADV 3PF1 ALA B 348 UNP P10384 ASP 373 ENGINEERED MUTATION SEQADV 3PF1 HIS B 422 UNP P10384 EXPRESSION TAG SEQADV 3PF1 HIS B 423 UNP P10384 EXPRESSION TAG SEQADV 3PF1 HIS B 424 UNP P10384 EXPRESSION TAG SEQRES 1 A 424 ALA GLY PHE GLN LEU ASN GLU PHE SER SER SER GLY LEU SEQRES 2 A 424 GLY ARG ALA TYR SER GLY GLU GLY ALA ILE ALA ASP ASP SEQRES 3 A 424 ALA GLY ASN VAL SER ARG ASN PRO ALA LEU ILE THR MET SEQRES 4 A 424 PHE ASP ARG PRO THR PHE SER ALA GLY ALA VAL TYR ILE SEQRES 5 A 424 ASP PRO ASP VAL ASN ILE SER GLY THR SER PRO SER GLY SEQRES 6 A 424 ARG SER LEU LYS ALA ASP ASN ILE ALA PRO THR ALA TRP SEQRES 7 A 424 VAL PRO ASN MET HIS PHE VAL ALA PRO ILE ASN ASP GLN SEQRES 8 A 424 PHE GLY TRP GLY ALA SER ILE THR SER ASN TYR GLY LEU SEQRES 9 A 424 ALA THR GLU PHE ASN ASP THR TYR ALA GLY GLY SER VAL SEQRES 10 A 424 GLY GLY THR THR ASP LEU GLU THR MET ASN LEU ASN LEU SEQRES 11 A 424 SER GLY ALA TYR ARG LEU ASN ASN ALA TRP SER PHE GLY SEQRES 12 A 424 LEU GLY PHE ASN ALA VAL TYR ALA ARG ALA LYS ILE GLU SEQRES 13 A 424 ARG PHE ALA GLY ASP LEU GLY GLN LEU VAL ALA GLY GLN SEQRES 14 A 424 ILE MET GLN SER PRO ALA GLY GLN THR GLN GLN GLY GLN SEQRES 15 A 424 ALA LEU ALA ALA THR ALA ASN GLY ILE ASP SER ASN THR SEQRES 16 A 424 LYS ILE ALA HIS LEU ASN GLY ASN GLN TRP GLY PHE GLY SEQRES 17 A 424 TRP ASN ALA GLY ILE LEU TYR GLU LEU ASP LYS ASN ASN SEQRES 18 A 424 ARG TYR ALA LEU THR TYR ARG SER GLU VAL LYS ILE ASP SEQRES 19 A 424 PHE LYS GLY ASN TYR SER SER ASP LEU ASN ARG ALA PHE SEQRES 20 A 424 ASN ASN TYR GLY LEU PRO ILE PRO THR ALA THR GLY GLY SEQRES 21 A 424 ALA THR GLN SER GLY TYR LEU THR LEU ASN LEU PRO GLU SEQRES 22 A 424 MET TRP GLU VAL SER GLY TYR ASN ARG VAL ASP PRO GLN SEQRES 23 A 424 TRP ALA ILE HIS TYR SER LEU ALA TYR THR SER TRP SER SEQRES 24 A 424 GLN PHE GLN GLN LEU LYS ALA THR SER THR SER GLY ASP SEQRES 25 A 424 THR LEU PHE GLN LYS HIS GLU GLY PHE LYS ASP ALA TYR SEQRES 26 A 424 ARG ILE ALA LEU GLY THR THR TYR TYR TYR ASP ASP ASN SEQRES 27 A 424 TRP THR PHE ARG THR GLY ILE ALA PHE ALA ASP SER PRO SEQRES 28 A 424 VAL PRO ALA GLN ASN ARG SER ILE SER ILE PRO ASP GLN SEQRES 29 A 424 ASP ARG PHE TRP LEU SER ALA GLY THR THR TYR ALA PHE SEQRES 30 A 424 ASN LYS ASP ALA SER VAL ASP VAL GLY VAL SER TYR MET SEQRES 31 A 424 HIS GLY GLN SER VAL LYS ILE ASN GLU GLY PRO TYR GLN SEQRES 32 A 424 PHE GLU SER GLU GLY LYS ALA TRP LEU PHE GLY THR ASN SEQRES 33 A 424 PHE ASN TYR ALA PHE HIS HIS HIS SEQRES 1 B 424 ALA GLY PHE GLN LEU ASN GLU PHE SER SER SER GLY LEU SEQRES 2 B 424 GLY ARG ALA TYR SER GLY GLU GLY ALA ILE ALA ASP ASP SEQRES 3 B 424 ALA GLY ASN VAL SER ARG ASN PRO ALA LEU ILE THR MET SEQRES 4 B 424 PHE ASP ARG PRO THR PHE SER ALA GLY ALA VAL TYR ILE SEQRES 5 B 424 ASP PRO ASP VAL ASN ILE SER GLY THR SER PRO SER GLY SEQRES 6 B 424 ARG SER LEU LYS ALA ASP ASN ILE ALA PRO THR ALA TRP SEQRES 7 B 424 VAL PRO ASN MET HIS PHE VAL ALA PRO ILE ASN ASP GLN SEQRES 8 B 424 PHE GLY TRP GLY ALA SER ILE THR SER ASN TYR GLY LEU SEQRES 9 B 424 ALA THR GLU PHE ASN ASP THR TYR ALA GLY GLY SER VAL SEQRES 10 B 424 GLY GLY THR THR ASP LEU GLU THR MET ASN LEU ASN LEU SEQRES 11 B 424 SER GLY ALA TYR ARG LEU ASN ASN ALA TRP SER PHE GLY SEQRES 12 B 424 LEU GLY PHE ASN ALA VAL TYR ALA ARG ALA LYS ILE GLU SEQRES 13 B 424 ARG PHE ALA GLY ASP LEU GLY GLN LEU VAL ALA GLY GLN SEQRES 14 B 424 ILE MET GLN SER PRO ALA GLY GLN THR GLN GLN GLY GLN SEQRES 15 B 424 ALA LEU ALA ALA THR ALA ASN GLY ILE ASP SER ASN THR SEQRES 16 B 424 LYS ILE ALA HIS LEU ASN GLY ASN GLN TRP GLY PHE GLY SEQRES 17 B 424 TRP ASN ALA GLY ILE LEU TYR GLU LEU ASP LYS ASN ASN SEQRES 18 B 424 ARG TYR ALA LEU THR TYR ARG SER GLU VAL LYS ILE ASP SEQRES 19 B 424 PHE LYS GLY ASN TYR SER SER ASP LEU ASN ARG ALA PHE SEQRES 20 B 424 ASN ASN TYR GLY LEU PRO ILE PRO THR ALA THR GLY GLY SEQRES 21 B 424 ALA THR GLN SER GLY TYR LEU THR LEU ASN LEU PRO GLU SEQRES 22 B 424 MET TRP GLU VAL SER GLY TYR ASN ARG VAL ASP PRO GLN SEQRES 23 B 424 TRP ALA ILE HIS TYR SER LEU ALA TYR THR SER TRP SER SEQRES 24 B 424 GLN PHE GLN GLN LEU LYS ALA THR SER THR SER GLY ASP SEQRES 25 B 424 THR LEU PHE GLN LYS HIS GLU GLY PHE LYS ASP ALA TYR SEQRES 26 B 424 ARG ILE ALA LEU GLY THR THR TYR TYR TYR ASP ASP ASN SEQRES 27 B 424 TRP THR PHE ARG THR GLY ILE ALA PHE ALA ASP SER PRO SEQRES 28 B 424 VAL PRO ALA GLN ASN ARG SER ILE SER ILE PRO ASP GLN SEQRES 29 B 424 ASP ARG PHE TRP LEU SER ALA GLY THR THR TYR ALA PHE SEQRES 30 B 424 ASN LYS ASP ALA SER VAL ASP VAL GLY VAL SER TYR MET SEQRES 31 B 424 HIS GLY GLN SER VAL LYS ILE ASN GLU GLY PRO TYR GLN SEQRES 32 B 424 PHE GLU SER GLU GLY LYS ALA TRP LEU PHE GLY THR ASN SEQRES 33 B 424 PHE ASN TYR ALA PHE HIS HIS HIS HET C8E A 505 16 HET C8E A 507 21 HET C8E A 508 21 HET C8E A 509 9 HET LDA A 515 4 HET LDA A 525 10 HET C8E B 506 16 HET LDA B 510 5 HET C8E B 520 21 HET C8E B 530 21 HET C8E B 535 63 HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE HETNAM LDA LAURYL DIMETHYLAMINE-N-OXIDE FORMUL 3 C8E 8(C16 H34 O5) FORMUL 7 LDA 3(C14 H31 N O) FORMUL 14 HOH *90(H2 O) HELIX 1 1 SER A 9 ALA A 16 1 8 HELIX 2 2 ASP A 26 ARG A 32 5 7 HELIX 3 3 ASN A 33 PHE A 40 5 8 HELIX 4 4 GLY A 114 GLY A 118 5 5 HELIX 5 5 ASP A 161 SER A 173 1 13 HELIX 6 6 PRO A 174 GLN A 177 5 4 HELIX 7 7 THR A 178 ILE A 191 1 14 HELIX 8 8 ASN A 244 ASN A 248 5 5 HELIX 9 9 TRP A 298 PHE A 301 5 4 HELIX 10 10 PRO A 353 ARG A 357 5 5 HELIX 11 11 SER B 9 ALA B 16 1 8 HELIX 12 12 ASP B 26 VAL B 30 5 5 HELIX 13 13 ASN B 33 PHE B 40 5 8 HELIX 14 14 GLY B 114 GLY B 118 5 5 HELIX 15 15 ASP B 161 SER B 173 1 13 HELIX 16 16 PRO B 174 GLN B 177 5 4 HELIX 17 17 THR B 178 GLY B 190 1 13 HELIX 18 18 ASN B 244 ASN B 248 5 5 HELIX 19 19 TRP B 298 PHE B 301 5 4 HELIX 20 20 PRO B 353 ARG B 357 5 5 SHEET 1 A18 LEU A 104 GLU A 107 0 SHEET 2 A18 THR A 120 ARG A 135 -1 O LEU A 123 N LEU A 104 SHEET 3 A18 PHE A 92 THR A 99 -1 N THR A 99 O ASN A 127 SHEET 4 A18 ALA A 77 ASN A 89 -1 N ILE A 88 O PHE A 92 SHEET 5 A18 THR A 44 SER A 59 -1 N VAL A 50 O VAL A 79 SHEET 6 A18 TYR A 402 ALA A 420 -1 O PHE A 413 N TYR A 51 SHEET 7 A18 ALA A 381 GLU A 399 -1 N SER A 388 O LEU A 412 SHEET 8 A18 ARG A 366 ALA A 376 -1 N LEU A 369 O TYR A 389 SHEET 9 A18 TRP A 339 ALA A 348 -1 N ALA A 348 O ARG A 366 SHEET 10 A18 ALA A 324 TYR A 333 -1 N TYR A 333 O PHE A 341 SHEET 11 A18 TRP A 287 THR A 296 -1 N ALA A 294 O ARG A 326 SHEET 12 A18 MET A 274 ASN A 281 -1 N ASN A 281 O ILE A 289 SHEET 13 A18 ASN A 221 ARG A 228 -1 N ARG A 228 O MET A 274 SHEET 14 A18 LYS A 196 ASP A 218 -1 N TYR A 215 O TYR A 223 SHEET 15 A18 VAL A 231 SER A 240 -1 O SER A 240 N HIS A 199 SHEET 16 A18 GLN A 263 LEU A 271 -1 O GLY A 265 N GLY A 237 SHEET 17 A18 GLN A 303 THR A 307 -1 O THR A 307 N TYR A 266 SHEET 18 A18 THR A 313 HIS A 318 -1 O PHE A 315 N ALA A 306 SHEET 1 B 8 LEU A 104 GLU A 107 0 SHEET 2 B 8 THR A 120 ARG A 135 -1 O LEU A 123 N LEU A 104 SHEET 3 B 8 TRP A 140 PHE A 158 -1 O TYR A 150 N MET A 126 SHEET 4 B 8 LYS A 196 ASP A 218 -1 O GLY A 206 N VAL A 149 SHEET 5 B 8 VAL A 231 SER A 240 -1 O SER A 240 N HIS A 199 SHEET 6 B 8 GLN A 263 LEU A 271 -1 O GLY A 265 N GLY A 237 SHEET 7 B 8 GLN A 303 THR A 307 -1 O THR A 307 N TYR A 266 SHEET 8 B 8 THR A 313 HIS A 318 -1 O PHE A 315 N ALA A 306 SHEET 1 C16 TYR B 402 ALA B 420 0 SHEET 2 C16 THR B 44 GLY B 60 -1 N TYR B 51 O PHE B 413 SHEET 3 C16 ALA B 77 PRO B 87 -1 O HIS B 83 N SER B 46 SHEET 4 C16 PHE B 92 THR B 99 -1 O TRP B 94 N ALA B 86 SHEET 5 C16 THR B 120 ARG B 135 -1 O ASN B 127 N THR B 99 SHEET 6 C16 TRP B 140 PHE B 158 -1 O PHE B 146 N LEU B 130 SHEET 7 C16 LYS B 196 GLU B 216 -1 O GLY B 206 N VAL B 149 SHEET 8 C16 ASN B 221 ARG B 228 -1 O TYR B 223 N TYR B 215 SHEET 9 C16 MET B 274 ASN B 281 -1 O GLU B 276 N THR B 226 SHEET 10 C16 TRP B 287 THR B 296 -1 O TYR B 295 N TRP B 275 SHEET 11 C16 ALA B 324 TYR B 333 -1 O THR B 332 N ALA B 288 SHEET 12 C16 TRP B 339 ALA B 348 -1 O ILE B 345 N LEU B 329 SHEET 13 C16 ARG B 366 ALA B 376 -1 O TRP B 368 N ALA B 346 SHEET 14 C16 ALA B 381 GLY B 392 -1 O TYR B 389 N LEU B 369 SHEET 15 C16 TYR B 402 ALA B 420 -1 O LEU B 412 N SER B 388 SHEET 16 C16 VAL B 395 GLU B 399 -1 N ILE B 397 O PHE B 404 SHEET 1 D 8 LEU B 104 GLU B 107 0 SHEET 2 D 8 THR B 120 ARG B 135 -1 O LEU B 123 N LEU B 104 SHEET 3 D 8 TRP B 140 PHE B 158 -1 O PHE B 146 N LEU B 130 SHEET 4 D 8 LYS B 196 GLU B 216 -1 O GLY B 206 N VAL B 149 SHEET 5 D 8 VAL B 231 SER B 240 -1 O ASN B 238 N ASN B 201 SHEET 6 D 8 GLN B 263 LEU B 271 -1 O GLN B 263 N TYR B 239 SHEET 7 D 8 GLN B 303 THR B 307 -1 O THR B 307 N TYR B 266 SHEET 8 D 8 THR B 313 HIS B 318 -1 O PHE B 315 N ALA B 306 SITE 1 AC1 8 ALA A 153 ASN A 201 GLY A 265 LEU A 304 SITE 2 AC1 8 LYS A 317 GLU A 319 SER A 360 ILE A 361 SITE 1 AC2 11 SER A 116 LEU A 162 VAL A 166 ILE A 197 SITE 2 AC2 11 PRO A 253 ILE A 254 PRO A 255 THR A 256 SITE 3 AC2 11 THR A 313 GLN A 316 C8E A 509 SITE 1 AC3 6 THR A 76 ALA A 77 TRP A 78 ILE B 88 SITE 2 AC3 6 ASN B 89 PHE B 92 SITE 1 AC4 4 LEU A 162 PRO A 253 GLY A 400 C8E A 507 SITE 1 AC5 1 GLN A 180 SITE 1 AC6 1 ASN A 244 SITE 1 AC7 11 ALA B 153 LEU B 200 ASN B 201 PHE B 235 SITE 2 AC7 11 GLY B 237 GLY B 265 LEU B 304 LYS B 317 SITE 3 AC7 11 GLU B 319 SER B 360 ILE B 361 SITE 1 AC8 2 THR B 187 ALA B 246 SITE 1 AC9 9 SER B 116 LEU B 162 ILE B 197 PRO B 253 SITE 2 AC9 9 ILE B 254 PRO B 255 THR B 256 THR B 313 SITE 3 AC9 9 GLN B 316 SITE 1 BC1 14 ILE A 88 GLY A 93 TRP A 94 LEU A 130 SITE 2 BC1 14 GLY A 132 ALA A 133 GLY B 48 ALA B 49 SITE 3 BC1 14 TRP B 78 PRO B 80 PHE B 413 GLY B 414 SITE 4 BC1 14 THR B 415 PHE B 417 CRYST1 62.880 145.970 151.240 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015903 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006851 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006612 0.00000