HEADER LIPID BINDING PROTEIN 26-NOV-10 3PQS TITLE THE CRYSTAL STRUCTURES OF PORCINE PATHOGEN APH87_TBPB COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSFERRIN-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACTINOBACILLUS PLEUROPNEUMONIAE; SOURCE 3 ORGANISM_COMMON: HAEMOPHILUS PLEUROPNEUMONIAE; SOURCE 4 ORGANISM_TAXID: 715; SOURCE 5 STRAIN: H87; SOURCE 6 GENE: TFBA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS LIPOPROTEIN, TRANSFERRIN RECEPTOR, IRON ACQUISITION, VACCINE KEYWDS 2 CANDIDATE, BETA BARREL, TRANSFERRIN BINDING, TRANSFERRIN, KEYWDS 3 OUTERMEMBRANE, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.CALMETTES,T.F.MORAES REVDAT 4 08-NOV-17 3PQS 1 REMARK REVDAT 3 20-APR-11 3PQS 1 JRNL REVDAT 2 23-FEB-11 3PQS 1 JRNL REVDAT 1 02-FEB-11 3PQS 0 JRNL AUTH C.CALMETTES,R.H.YU,L.P.SILVA,D.CURRAN,D.C.SCHRIEMER, JRNL AUTH 2 A.B.SCHRYVERS,T.F.MORAES JRNL TITL STRUCTURAL VARIATIONS WITHIN THE TRANSFERRIN BINDING SITE ON JRNL TITL 2 TRANSFERRIN-BINDING PROTEIN B, TBPB. JRNL REF J.BIOL.CHEM. V. 286 12683 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21297163 JRNL DOI 10.1074/JBC.M110.206102 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.5_2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 53133 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2658 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.1508 - 4.5231 1.00 5259 277 0.1473 0.1666 REMARK 3 2 4.5231 - 3.5905 1.00 5098 269 0.1299 0.1673 REMARK 3 3 3.5905 - 3.1368 1.00 5070 267 0.1422 0.1894 REMARK 3 4 3.1368 - 2.8500 1.00 5062 266 0.1500 0.2035 REMARK 3 5 2.8500 - 2.6458 1.00 5007 264 0.1677 0.2014 REMARK 3 6 2.6458 - 2.4898 1.00 5029 264 0.1785 0.2417 REMARK 3 7 2.4898 - 2.3651 1.00 4983 263 0.1835 0.2484 REMARK 3 8 2.3651 - 2.2621 1.00 4998 264 0.2045 0.2424 REMARK 3 9 2.2621 - 2.1751 1.00 4996 262 0.2295 0.2625 REMARK 3 10 2.1751 - 2.1000 1.00 4973 262 0.2703 0.3069 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 70.71 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.20040 REMARK 3 B22 (A**2) : -14.72960 REMARK 3 B33 (A**2) : 17.93010 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4204 REMARK 3 ANGLE : 1.062 5675 REMARK 3 CHIRALITY : 0.072 609 REMARK 3 PLANARITY : 0.004 742 REMARK 3 DIHEDRAL : 17.450 1578 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 26:122) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0528 22.3841 15.0544 REMARK 3 T TENSOR REMARK 3 T11: 0.3236 T22: 0.3221 REMARK 3 T33: 0.7058 T12: -0.0414 REMARK 3 T13: 0.0959 T23: -0.0678 REMARK 3 L TENSOR REMARK 3 L11: 0.6496 L22: 4.2440 REMARK 3 L33: 2.1513 L12: -0.4122 REMARK 3 L13: 0.2666 L23: 0.1945 REMARK 3 S TENSOR REMARK 3 S11: -0.0509 S12: 0.0685 S13: 0.4691 REMARK 3 S21: -0.5641 S22: 0.2433 S23: -1.3837 REMARK 3 S31: -0.4087 S32: 0.4003 S33: -0.1739 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 123:294) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7605 16.4209 22.3750 REMARK 3 T TENSOR REMARK 3 T11: 0.2522 T22: 0.3326 REMARK 3 T33: 0.2617 T12: -0.0066 REMARK 3 T13: -0.0435 T23: -0.0485 REMARK 3 L TENSOR REMARK 3 L11: 2.7005 L22: 2.9510 REMARK 3 L33: 1.7500 L12: -0.7288 REMARK 3 L13: -0.3352 L23: 0.8313 REMARK 3 S TENSOR REMARK 3 S11: -0.0547 S12: -0.1989 S13: 0.3598 REMARK 3 S21: 0.0917 S22: 0.1744 S23: -0.3455 REMARK 3 S31: 0.0660 S32: -0.0106 S33: -0.1210 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 295:528) REMARK 3 ORIGIN FOR THE GROUP (A): 34.7866 -17.7598 16.2893 REMARK 3 T TENSOR REMARK 3 T11: 0.4195 T22: 0.2657 REMARK 3 T33: 0.6283 T12: 0.0566 REMARK 3 T13: 0.0594 T23: -0.0274 REMARK 3 L TENSOR REMARK 3 L11: 2.2693 L22: 4.7582 REMARK 3 L33: 1.7425 L12: -0.2739 REMARK 3 L13: -0.1898 L23: -0.7950 REMARK 3 S TENSOR REMARK 3 S11: -0.0861 S12: -0.0458 S13: -0.2118 REMARK 3 S21: -0.4859 S22: 0.0919 S23: -1.0755 REMARK 3 S31: 0.2894 S32: 0.1556 S33: 0.0066 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PQS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062706. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53954 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 74.0 REMARK 200 DATA REDUNDANCY : 12.50 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 23.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.61900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.16 M SODIUM ACETATE, 0.08 M CALCIUM REMARK 280 CACODYLATE, 23% PEG 3350, 15% GLYCEROL, PH 6.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.13500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.13500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 66.30000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.65000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 66.30000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.65000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.13500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 66.30000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.65000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.13500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 66.30000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 75.65000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 872 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 8 REMARK 465 ASP A 9 REMARK 465 LEU A 10 REMARK 465 ASP A 11 REMARK 465 ASP A 12 REMARK 465 VAL A 13 REMARK 465 GLN A 14 REMARK 465 PRO A 15 REMARK 465 ASN A 16 REMARK 465 LYS A 17 REMARK 465 ALA A 18 REMARK 465 VAL A 19 REMARK 465 GLU A 20 REMARK 465 PRO A 21 REMARK 465 GLU A 22 REMARK 465 LYS A 23 REMARK 465 THR A 24 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 144 177.22 72.77 REMARK 500 ILE A 246 -50.87 -120.71 REMARK 500 LEU A 247 52.10 -106.85 REMARK 500 ALA A 298 104.06 -160.60 REMARK 500 GLU A 368 49.53 -102.75 REMARK 500 THR A 468 174.18 -58.89 REMARK 500 LEU A 474 15.89 -68.11 REMARK 500 ASP A 475 92.94 19.16 REMARK 500 SER A 476 133.30 -31.95 REMARK 500 SER A 479 32.94 -90.98 REMARK 500 GLN A 480 -14.90 -153.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 3968 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 529 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 530 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 531 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 533 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 534 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 535 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 536 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 537 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 538 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 539 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 540 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 541 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 542 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 543 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAC A 532 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PQU RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT SEQUENCING CONFIRMED THE RESIDUE AT THIS REMARK 999 POSITION IS A VALINE FOR STRAIN H087 USED IN THE CRYSTALLIZATION. DBREF 3PQS A 8 528 UNP Q44167 Q44167_ACTPL 27 547 SEQADV 3PQS VAL A 119 UNP Q44167 ASP 138 SEE REMARK 999 SEQRES 1 A 521 PHE ASP LEU ASP ASP VAL GLN PRO ASN LYS ALA VAL GLU SEQRES 2 A 521 PRO GLU LYS THR LYS VAL ASN TYR THR ASP GLU GLU THR SEQRES 3 A 521 GLN LYS ARG LYS LYS GLU GLU LEU ASP LYS LEU MET GLU SEQRES 4 A 521 PRO ALA LEU GLY TYR VAL THR LYS ILE PRO VAL ASN ILE SEQRES 5 A 521 PRO SER VAL ARG LYS THR GLU ILE SER GLU ILE ASP THR SEQRES 6 A 521 VAL THR ASP GLU SER LEU SER LEU VAL PRO ASN GLU ASP SEQRES 7 A 521 LYS LEU ARG THR ILE ALA ASN GLU ASN TYR GLY SER VAL SEQRES 8 A 521 VAL THR LYS SER GLY SER ASN THR MET ASN PHE VAL ARG SEQRES 9 A 521 SER GLY TYR THR ILE ASP VAL VAL HIS TYR GLY LEU ARG SEQRES 10 A 521 ASP LYS GLY TYR VAL TYR TYR LYS GLY VAL HIS PRO SER SEQRES 11 A 521 LYS GLU LEU PRO LYS GLY ASN ILE ILE VAL TYR GLN GLY SEQRES 12 A 521 GLU TRP ASP PHE THR SER ASN ALA ASP LEU ASP ALA LYS SEQRES 13 A 521 ARG PRO ASN TYR ASN PRO GLU PHE ASN GLY TYR GLY ALA SEQRES 14 A 521 GLY GLN ARG VAL GLY VAL THR SER ALA ASP ALA LYS GLU SEQRES 15 A 521 ARG THR TYR ILE SER LYS PHE ASN ILE ASP PHE SER ASN SEQRES 16 A 521 LYS LYS LEU ASN GLY GLN LEU LEU THR LYS THR LYS GLU SEQRES 17 A 521 ASN GLN GLU LYS LEU ARG TYR THR VAL GLU ALA ASN ILE SEQRES 18 A 521 SER GLY ASN ARG PHE ARG GLY LYS ALA THR ALA THR ASP SEQRES 19 A 521 LYS THR ASP PRO ILE LEU GLY LYS ASP SER GLU HIS LEU SEQRES 20 A 521 GLU GLY GLY LEU TYR GLY PRO LYS SER GLU GLU LEU ALA SEQRES 21 A 521 GLY LYS PHE VAL ALA HIS ASP LYS SER LEU PHE ALA VAL SEQRES 22 A 521 PHE SER GLY LYS ARG GLY ASN ASP VAL LEU GLU THR VAL SEQRES 23 A 521 LYS ILE ILE ASP ALA SER LYS ILE ASP LEU THR THR PHE SEQRES 24 A 521 GLU SER SER GLU LEU ASN ASN PHE GLY ASN ALA ASN VAL SEQRES 25 A 521 LEU ILE ILE ASP GLY GLN LYS ILE ASP LEU ALA GLY ALA SEQRES 26 A 521 ASP PHE LYS ASN ARG LYS THR VAL ASP ILE ASN GLY LYS SEQRES 27 A 521 THR MET VAL ALA ILE ALA CYS CYS SER ASN LEU GLU TYR SEQRES 28 A 521 MET LYS PHE GLY GLN LEU TRP GLN LYS GLU GLY GLU GLN SEQRES 29 A 521 THR LYS ASP ASN SER LEU PHE LEU GLN GLY GLU ARG THR SEQRES 30 A 521 ALA THR ASP LYS ILE PRO VAL GLY GLY ASN TYR LYS TYR SEQRES 31 A 521 VAL GLY THR TRP ASP ALA LEU VAL SER LYS GLY THR ASN SEQRES 32 A 521 TRP VAL ALA GLU ALA ASP ASN ASN ARG GLU SER GLY TYR SEQRES 33 A 521 ARG SER GLU PHE ASP VAL ASN PHE GLY ASP LYS LYS VAL SEQRES 34 A 521 SER GLY LYS LEU PHE ASP LYS GLY GLY ILE VAL PRO VAL SEQRES 35 A 521 PHE MET ILE ASN ALA ASP ILE LYS GLY ASN GLY PHE THR SEQRES 36 A 521 GLY THR ALA ASN THR THR ASP THR GLY PHE ALA LEU ASP SEQRES 37 A 521 SER GLY SER SER GLN HIS GLY ASN ALA VAL PHE SER ASP SEQRES 38 A 521 ILE LYS VAL ASN GLY GLY PHE TYR GLY PRO THR ALA GLY SEQRES 39 A 521 GLU LEU GLY GLY GLN PHE HIS HIS LYS SER ASP ASN GLY SEQRES 40 A 521 SER VAL GLY ALA VAL PHE GLY ALA LYS ARG GLN ILE GLU SEQRES 41 A 521 LYS HET GOL A3968 6 HET GOL A 529 6 HET GOL A 530 6 HET GOL A 531 6 HET GOL A 533 6 HET GOL A 534 6 HET GOL A 535 6 HET GOL A 536 6 HET GOL A 537 6 HET GOL A 538 6 HET GOL A 539 6 HET GOL A 540 6 HET GOL A 541 6 HET GOL A 542 6 HET GOL A 543 6 HET CAC A 532 5 HETNAM GOL GLYCEROL HETNAM CAC CACODYLATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN CAC DIMETHYLARSINATE FORMUL 2 GOL 15(C3 H8 O3) FORMUL 17 CAC C2 H6 AS O2 1- FORMUL 18 HOH *498(H2 O) HELIX 1 1 THR A 33 LEU A 44 1 12 HELIX 2 2 ASN A 83 ASN A 94 1 12 HELIX 3 3 THR A 183 ALA A 187 5 5 HELIX 4 4 ALA A 385 ILE A 389 5 5 SHEET 1 A 5 ILE A 70 VAL A 73 0 SHEET 2 A 5 GLY A 50 LYS A 54 -1 N GLY A 50 O VAL A 73 SHEET 3 A 5 GLY A 127 GLY A 133 -1 O VAL A 129 N THR A 53 SHEET 4 A 5 VAL A 110 ASP A 117 -1 N ARG A 111 O LYS A 132 SHEET 5 A 5 VAL A 98 LYS A 101 -1 N VAL A 99 O ILE A 116 SHEET 1 B 2 LYS A 64 THR A 65 0 SHEET 2 B 2 ALA A 158 ASP A 159 -1 O ALA A 158 N THR A 65 SHEET 1 C 2 GLU A 139 PRO A 141 0 SHEET 2 C 2 THR A 292 LYS A 294 -1 O VAL A 293 N LEU A 140 SHEET 1 D 9 ILE A 145 SER A 156 0 SHEET 2 D 9 ARG A 190 ASP A 199 -1 O ILE A 198 N ILE A 146 SHEET 3 D 9 LYS A 204 THR A 213 -1 O LYS A 204 N ASP A 199 SHEET 4 D 9 GLU A 218 SER A 229 -1 O VAL A 224 N GLY A 207 SHEET 5 D 9 ARG A 232 ALA A 239 -1 O THR A 238 N THR A 223 SHEET 6 D 9 SER A 251 TYR A 259 -1 O SER A 251 N ALA A 237 SHEET 7 D 9 GLU A 265 VAL A 271 -1 O ALA A 267 N GLY A 257 SHEET 8 D 9 LEU A 277 ARG A 285 -1 O GLY A 283 N LEU A 266 SHEET 9 D 9 ILE A 145 SER A 156 -1 N ASP A 153 O VAL A 280 SHEET 1 E 6 SER A 308 GLU A 310 0 SHEET 2 E 6 ILE A 296 ASP A 302 -1 N LYS A 300 O SER A 309 SHEET 3 E 6 GLN A 371 GLU A 382 -1 O LEU A 377 N ILE A 301 SHEET 4 E 6 MET A 359 GLU A 368 -1 N LYS A 360 O GLN A 380 SHEET 5 E 6 LYS A 345 CYS A 352 -1 N THR A 346 O LYS A 367 SHEET 6 E 6 LYS A 335 ILE A 342 -1 N LYS A 338 O ALA A 349 SHEET 1 F 2 VAL A 319 ILE A 322 0 SHEET 2 F 2 GLN A 325 ASP A 328 -1 O GLN A 325 N ILE A 322 SHEET 1 G10 ASN A 410 ALA A 413 0 SHEET 2 G10 ASN A 394 SER A 406 -1 N VAL A 405 O TRP A 411 SHEET 3 G10 SER A 515 ARG A 524 -1 O SER A 515 N SER A 406 SHEET 4 G10 GLU A 502 HIS A 509 -1 N HIS A 509 O VAL A 516 SHEET 5 G10 ILE A 489 TYR A 496 -1 N TYR A 496 O GLU A 502 SHEET 6 G10 GLY A 460 ASN A 466 -1 N GLY A 463 O VAL A 491 SHEET 7 G10 PHE A 450 LYS A 457 -1 N MET A 451 O ASN A 466 SHEET 8 G10 LYS A 435 LEU A 440 -1 N LEU A 440 O PHE A 450 SHEET 9 G10 ARG A 424 ASN A 430 -1 N ASP A 428 O SER A 437 SHEET 10 G10 ASN A 394 SER A 406 -1 N TYR A 397 O PHE A 427 SHEET 1 H 2 PHE A 472 ALA A 473 0 SHEET 2 H 2 ASN A 483 ALA A 484 -1 O ALA A 484 N PHE A 472 SSBOND 1 CYS A 352 CYS A 353 1555 1555 2.03 CISPEP 1 LYS A 25 VAL A 26 0 1.58 CISPEP 2 CYS A 352 CYS A 353 0 -3.30 CISPEP 3 ASP A 475 SER A 476 0 6.51 CISPEP 4 SER A 476 GLY A 477 0 10.26 SITE 1 AC1 7 GLU A 170 ARG A 190 LYS A 219 ARG A 221 SITE 2 AC1 7 THR A 243 GOL A 533 HOH A 683 SITE 1 AC2 12 ASP A 297 LEU A 379 ARG A 383 ASN A 492 SITE 2 AC2 12 GLY A 493 TYR A 496 HOH A 564 HOH A 572 SITE 3 AC2 12 HOH A 735 HOH A 741 HOH A 821 HOH A1003 SITE 1 AC3 9 GLN A 208 LEU A 210 GLU A 218 THR A 238 SITE 2 AC3 9 ALA A 239 THR A 240 LYS A 242 HOH A 771 SITE 3 AC3 9 HOH A 870 SITE 1 AC4 6 THR A 100 LYS A 101 SER A 102 GLY A 103 SITE 2 AC4 6 SER A 104 ASN A 105 SITE 1 AC5 7 ASN A 168 PRO A 169 PRO A 245 ILE A 246 SITE 2 AC5 7 HOH A 693 HOH A 747 GOL A3968 SITE 1 AC6 6 GLU A 76 HIS A 135 GLU A 310 GOL A 543 SITE 2 AC6 6 HOH A 645 HOH A 728 SITE 1 AC7 7 GLU A 225 ASN A 227 ARG A 234 GLY A 235 SITE 2 AC7 7 LYS A 236 HOH A 684 HOH A 865 SITE 1 AC8 7 ARG A 36 ALA A 330 SER A 354 LEU A 356 SITE 2 AC8 7 LYS A 360 HOH A 937 HOH A 985 SITE 1 AC9 4 GLN A 34 HIS A 273 HOH A 783 HOH A 889 SITE 1 BC1 6 LYS A 300 LYS A 345 MET A 347 GOL A 540 SITE 2 BC1 6 HOH A 848 HOH A1000 SITE 1 BC2 6 ASN A 206 GLU A 225 HOH A 867 HOH A 868 SITE 2 BC2 6 HOH A 935 HOH A 997 SITE 1 BC3 3 LYS A 300 GOL A 538 HOH A 960 SITE 1 BC4 3 GLU A 31 TYR A 395 HOH A 647 SITE 1 BC5 6 SER A 104 ASN A 105 THR A 106 MET A 107 SITE 2 BC5 6 ASN A 108 LYS A 284 SITE 1 BC6 7 HIS A 135 PRO A 136 LYS A 138 PRO A 261 SITE 2 BC6 7 GLU A 310 ASN A 312 GOL A 534 SITE 1 BC7 7 ASN A 316 ASN A 318 GLU A 357 TYR A 358 SITE 2 BC7 7 GLU A 382 HOH A 743 HOH A 937 CRYST1 132.600 151.300 90.270 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007541 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006609 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011078 0.00000