HEADER HYDROLASE/PROTEIN BINDING 02-DEC-10 3PT2 TITLE STRUCTURE OF A VIRAL OTU DOMAIN PROTEASE BOUND TO UBIQUITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: OTU DOMAIN (UNP RESIDUES 1-184); COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: UBIQUITIN B; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS; SOURCE 3 ORGANISM_TAXID: 11593; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-49B(+); SOURCE 9 OTHER_DETAILS: N-TERMINAL GLUTATHIONE-S-TRANSFERASE FUSION; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: UBB; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PTYB2; SOURCE 20 OTHER_DETAILS: C-TERMINAL CHITIN BINDING DOMAIN FUSION KEYWDS VIRAL DEUBIQUITINASE, 3-AMINOPROPANE, INTEIN-MEDIATED LIGATION, KEYWDS 2 ISG15, CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS, HYDROLASE-PROTEIN KEYWDS 3 BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.W.JAMES,J.P.BACIK,N.FRIAS-STAHELI,A.GARCIA-SASTRE,B.L.MARK REVDAT 5 31-MAY-23 3PT2 1 COMPND REMARK SEQADV HET REVDAT 5 2 1 HETNAM FORMUL LINK ATOM REVDAT 4 08-NOV-17 3PT2 1 REMARK REVDAT 3 23-FEB-11 3PT2 1 JRNL REVDAT 2 02-FEB-11 3PT2 1 JRNL REVDAT 1 19-JAN-11 3PT2 0 JRNL AUTH T.W.JAMES,N.FRIAS-STAHELI,J.P.BACIK,J.M.LEVINGSTON MACLEOD, JRNL AUTH 2 M.KHAJEHPOUR,A.GARCIA-SASTRE,B.L.MARK JRNL TITL STRUCTURAL BASIS FOR THE REMOVAL OF UBIQUITIN AND JRNL TITL 2 INTERFERON-STIMULATED GENE 15 BY A VIRAL OVARIAN TUMOR JRNL TITL 3 DOMAIN-CONTAINING PROTEASE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 2222 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 21245344 JRNL DOI 10.1073/PNAS.1013388108 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 12872 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1289 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8017 - 5.1985 0.99 1413 157 0.1693 0.1915 REMARK 3 2 5.1985 - 4.1269 1.00 1330 148 0.1186 0.1766 REMARK 3 3 4.1269 - 3.6055 1.00 1314 146 0.1428 0.1972 REMARK 3 4 3.6055 - 3.2759 0.99 1289 143 0.1540 0.2082 REMARK 3 5 3.2759 - 3.0411 0.99 1271 144 0.1713 0.2659 REMARK 3 6 3.0411 - 2.8619 0.98 1261 140 0.1864 0.2643 REMARK 3 7 2.8619 - 2.7185 0.96 1244 140 0.1964 0.3130 REMARK 3 8 2.7185 - 2.6002 0.97 1247 136 0.2042 0.3127 REMARK 3 9 2.6002 - 2.5001 0.96 1214 135 0.1998 0.2967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 50.19 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.36890 REMARK 3 B22 (A**2) : -0.36890 REMARK 3 B33 (A**2) : 0.73780 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1971 REMARK 3 ANGLE : 0.906 2665 REMARK 3 CHIRALITY : 0.057 293 REMARK 3 PLANARITY : 0.004 342 REMARK 3 DIHEDRAL : 13.107 732 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PT2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062781. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VERTICAL COLLIMATING MIRROR, DCM REMARK 200 WITH INDIRECTLY WATER-COOLED REMARK 200 FIRST CRYSTAL, TOROIDAL FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13116 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 52.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.40100 REMARK 200 R SYM FOR SHELL (I) : 0.46500 REMARK 200 FOR SHELL : 5.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27% PEG4000, 0.1 M SODIUM ACETATE, REMARK 280 0.21 M AMMONIUM SULFATE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K. 27% PEG6000, 0.1 M SODIUM ACETATE, 0.21 M REMARK 280 AMMONIUM SULFATE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.76000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 19.38000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.76000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 19.38000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 38.76000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 19.38000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 38.76000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 19.38000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -103.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 73.00500 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 126.44837 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 96.90000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 THR A 163 REMARK 465 ASP A 164 REMARK 465 THR A 165 REMARK 465 ARG A 166 REMARK 465 GLU A 167 REMARK 465 ALA A 168 REMARK 465 LEU A 169 REMARK 465 SER A 170 REMARK 465 LEU A 171 REMARK 465 MSE A 172 REMARK 465 ASP A 173 REMARK 465 ARG A 174 REMARK 465 VAL A 175 REMARK 465 ILE A 176 REMARK 465 ALA A 177 REMARK 465 VAL A 178 REMARK 465 ASP A 179 REMARK 465 GLN A 180 REMARK 465 LEU A 181 REMARK 465 THR A 182 REMARK 465 SER A 183 REMARK 465 SER A 184 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 101 -179.23 -174.62 REMARK 500 THR A 150 10.97 -149.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 185 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 186 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 4LJ B 76 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 77 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 78 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PSE RELATED DB: PDB REMARK 900 VIRAL OTU DOMAIN PROTEASE BOUND TO INTERFERON-STIMULATED GENE 15 REMARK 900 (ISG15) DBREF 3PT2 A 1 184 UNP Q6TQF5 Q6TQF5_9VIRU 1 184 DBREF 3PT2 B 1 75 UNP Q5U5U6 Q5U5U6_HUMAN 1 75 SEQADV 3PT2 GLY A -2 UNP Q6TQF5 EXPRESSION TAG SEQADV 3PT2 PRO A -1 UNP Q6TQF5 EXPRESSION TAG SEQADV 3PT2 GLY A 0 UNP Q6TQF5 EXPRESSION TAG SEQRES 1 A 187 GLY PRO GLY MSE ASP PHE LEU ARG SER LEU ASP TRP THR SEQRES 2 A 187 GLN VAL ILE ALA GLY GLN TYR VAL SER ASN PRO ARG PHE SEQRES 3 A 187 ASN ILE SER ASP TYR PHE GLU ILE VAL ARG GLN PRO GLY SEQRES 4 A 187 ASP GLY ASN CYS PHE TYR HIS SER ILE ALA GLU LEU THR SEQRES 5 A 187 MSE PRO ASN LYS THR ASP HIS SER TYR HIS TYR ILE LYS SEQRES 6 A 187 ARG LEU THR GLU SER ALA ALA ARG LYS TYR TYR GLN GLU SEQRES 7 A 187 GLU PRO GLU ALA ARG LEU VAL GLY LEU SER LEU GLU ASP SEQRES 8 A 187 TYR LEU LYS ARG MSE LEU SER ASP ASN GLU TRP GLY SER SEQRES 9 A 187 THR LEU GLU ALA SER MSE LEU ALA LYS GLU MSE GLY ILE SEQRES 10 A 187 THR ILE ILE ILE TRP THR VAL ALA ALA SER ASP GLU VAL SEQRES 11 A 187 GLU ALA GLY ILE LYS PHE GLY ASP GLY ASP VAL PHE THR SEQRES 12 A 187 ALA VAL ASN LEU LEU HIS SER GLY GLN THR HIS PHE ASP SEQRES 13 A 187 ALA LEU ARG ILE LEU PRO GLN PHE GLU THR ASP THR ARG SEQRES 14 A 187 GLU ALA LEU SER LEU MSE ASP ARG VAL ILE ALA VAL ASP SEQRES 15 A 187 GLN LEU THR SER SER SEQRES 1 B 75 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 B 75 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 B 75 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 B 75 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 B 75 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 B 75 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY MODRES 3PT2 MSE A 1 MET SELENOMETHIONINE MODRES 3PT2 MSE A 50 MET SELENOMETHIONINE MODRES 3PT2 MSE A 93 MET SELENOMETHIONINE MODRES 3PT2 MSE A 107 MET SELENOMETHIONINE MODRES 3PT2 MSE A 112 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 50 8 HET MSE A 93 8 HET MSE A 107 8 HET MSE A 112 8 HET SO4 A 185 5 HET ACT A 186 4 HET 4LJ B 76 4 HET SO4 B 77 5 HET SO4 B 78 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM 4LJ 1.7.6 3-BROMANYLPROPAN-1-AMINE FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 3 SO4 3(O4 S 2-) FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 4LJ C3 H8 BR N FORMUL 8 HOH *105(H2 O) HELIX 1 1 ASP A 2 ARG A 5 1 4 HELIX 2 2 ILE A 25 ASP A 27 5 3 HELIX 3 3 CYS A 40 THR A 49 1 10 HELIX 4 4 SER A 57 TYR A 72 5 16 HELIX 5 5 PRO A 77 VAL A 82 5 6 HELIX 6 6 LEU A 86 LEU A 94 1 9 HELIX 7 7 THR A 102 MSE A 112 1 11 HELIX 8 8 PRO A 159 PHE A 161 5 3 HELIX 9 7 THR B 22 GLY B 35 1 14 HELIX 10 8 PRO B 37 GLN B 40 5 4 HELIX 11 9 THR B 55 ASN B 60 5 6 SHEET 1 A 7 THR A 10 ILE A 13 0 SHEET 2 A 7 GLN A 16 SER A 19 -1 N VAL A 18 O THR A 10 SHEET 3 A 7 VAL A 127 PHE A 133 -1 N LYS A 132 O TYR A 17 SHEET 4 A 7 THR A 115 VAL A 121 -1 N THR A 120 O GLU A 128 SHEET 5 A 7 ALA A 141 SER A 147 1 N VAL A 142 O THR A 115 SHEET 6 A 7 HIS A 151 ILE A 157 -1 N LEU A 155 O ASN A 143 SHEET 7 A 7 PHE A 29 VAL A 32 -1 N VAL A 32 O ALA A 154 SHEET 1 C 5 THR B 12 GLU B 16 0 SHEET 2 C 5 GLN B 2 LYS B 6 -1 N ILE B 3 O LEU B 15 SHEET 3 C 5 THR B 66 LEU B 71 1 O LEU B 67 N PHE B 4 SHEET 4 C 5 GLN B 41 PHE B 45 -1 N ILE B 44 O HIS B 68 SHEET 5 C 5 LYS B 48 GLN B 49 -1 O LYS B 48 N PHE B 45 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ASP A 2 1555 1555 1.33 LINK SG CYS A 40 C1 4LJ B 76 1555 1555 1.80 LINK C THR A 49 N MSE A 50 1555 1555 1.33 LINK C MSE A 50 N PRO A 51 1555 1555 1.34 LINK C ARG A 92 N MSE A 93 1555 1555 1.33 LINK C MSE A 93 N LEU A 94 1555 1555 1.33 LINK C SER A 106 N MSE A 107 1555 1555 1.33 LINK C MSE A 107 N LEU A 108 1555 1555 1.33 LINK C GLU A 111 N MSE A 112 1555 1555 1.33 LINK C MSE A 112 N GLY A 113 1555 1555 1.33 LINK C GLY B 75 N1 4LJ B 76 1555 1555 1.40 SITE 1 AC1 7 MSE A 50 ASN A 52 THR A 54 SER A 57 SITE 2 AC1 7 TYR A 60 ARG A 63 HOH A 245 SITE 1 AC2 1 THR A 49 SITE 1 AC3 8 ASP A 37 GLY A 38 CYS A 40 TRP A 99 SITE 2 AC3 8 THR A 150 HIS A 151 ASP B 39 GLY B 75 SITE 1 AC4 5 GLU A 75 HOH A 210 LYS B 48 ARG B 54 SITE 2 AC4 5 HOH B 87 SITE 1 AC5 4 LEU A 81 TRP A 99 ARG B 72 ARG B 74 CRYST1 146.010 146.010 58.140 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006849 0.003954 0.000000 0.00000 SCALE2 0.000000 0.007908 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017200 0.00000