HEADER LYASE 08-DEC-10 3PWI TITLE CRYSTAL STRUCTURE OF THE MUTANT P34A OF D-GLUCARATE DEHYDRATASE FROM TITLE 2 ESCHERICHIA COLI COMPLEXED WITH PRODUCT 5-KETO-4-DEOXY-D-GLUCARATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCARATE DEHYDRATASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 444449; SOURCE 4 STRAIN: O157:H7 STR. EC4042; SOURCE 5 GENE: ECH74042_A2717; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENOLASE SUPERFAMILY FOLD, D-GLUCARATE DEHYDRATASE, 5-KETO-4-DEOXY-D- KEYWDS 2 GLUCARATE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR A.A.FEDOROV,E.V.FEDOROV,T.LUKK,J.A.GERLT,S.C.ALMO REVDAT 2 21-FEB-24 3PWI 1 REMARK SEQADV LINK REVDAT 1 28-DEC-11 3PWI 0 JRNL AUTH A.A.FEDOROV,E.V.FEDOROV,T.LUKK,J.A.GERLT,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF THE MUTANT P34A OF D-GLUCARATE JRNL TITL 2 DEHYDRATASE FROM ESCHERICHIA COLI COMPLEXED WITH PRODUCT JRNL TITL 3 5-KETO-4-DEOXY-D-GLUCARATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 63952 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3239 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.8710 - 6.3320 0.97 2734 130 0.1582 0.1881 REMARK 3 2 6.3320 - 5.0293 0.99 2724 137 0.1588 0.1881 REMARK 3 3 5.0293 - 4.3946 0.98 2697 146 0.1446 0.1772 REMARK 3 4 4.3946 - 3.9932 0.98 2668 145 0.1650 0.2139 REMARK 3 5 3.9932 - 3.7072 0.98 2679 150 0.1810 0.2260 REMARK 3 6 3.7072 - 3.4888 0.99 2677 164 0.2092 0.2472 REMARK 3 7 3.4888 - 3.3142 0.99 2665 159 0.2218 0.2739 REMARK 3 8 3.3142 - 3.1700 0.99 2700 142 0.2308 0.2705 REMARK 3 9 3.1700 - 3.0480 0.98 2683 137 0.2422 0.3058 REMARK 3 10 3.0480 - 2.9429 0.99 2691 139 0.2526 0.3159 REMARK 3 11 2.9429 - 2.8509 0.99 2643 151 0.2492 0.3144 REMARK 3 12 2.8509 - 2.7694 0.98 2669 142 0.2452 0.3139 REMARK 3 13 2.7694 - 2.6965 0.98 2715 127 0.2451 0.2614 REMARK 3 14 2.6965 - 2.6307 0.98 2653 154 0.2455 0.2987 REMARK 3 15 2.6307 - 2.5709 0.98 2693 142 0.2389 0.3044 REMARK 3 16 2.5709 - 2.5162 0.98 2655 139 0.2408 0.3067 REMARK 3 17 2.5162 - 2.4659 0.98 2634 137 0.2440 0.3150 REMARK 3 18 2.4659 - 2.4194 0.97 2633 152 0.2484 0.2854 REMARK 3 19 2.4194 - 2.3762 0.97 2607 139 0.2364 0.3073 REMARK 3 20 2.3762 - 2.3359 0.97 2675 123 0.2581 0.3482 REMARK 3 21 2.3359 - 2.2982 0.96 2593 130 0.2706 0.3479 REMARK 3 22 2.2982 - 2.2629 0.94 2546 130 0.2966 0.3141 REMARK 3 23 2.2629 - 2.2296 0.77 2079 124 0.3158 0.3583 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 41.14 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.33910 REMARK 3 B22 (A**2) : 12.99490 REMARK 3 B33 (A**2) : -11.65570 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.24550 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 7005 REMARK 3 ANGLE : 1.057 9490 REMARK 3 CHIRALITY : 0.072 1034 REMARK 3 PLANARITY : 0.005 1243 REMARK 3 DIHEDRAL : 17.603 2560 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PWI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000062897. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63952 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 38.865 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0.1M CAPS, 0.2M SODIUM REMARK 280 CHLORIDE, PH 10.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 75.39200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.46250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 75.39200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 64.46250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -8.38202 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 70.92542 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -159.16602 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 70.92542 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 485 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 523 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 PHE A 5 REMARK 465 THR A 6 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 465 PHE B 5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 95 42.92 -103.05 REMARK 500 GLN A 167 52.51 -150.18 REMARK 500 ASP A 261 63.46 30.24 REMARK 500 MET A 290 -42.58 -132.21 REMARK 500 THR A 318 165.01 69.31 REMARK 500 LYS A 395 135.99 -37.51 REMARK 500 LEU A 419 145.04 -30.72 REMARK 500 ASN A 439 2.24 -66.99 REMARK 500 ASN B 46 11.02 -68.76 REMARK 500 ARG B 94 -7.68 -59.25 REMARK 500 ALA B 182 100.12 -164.05 REMARK 500 ASP B 261 61.41 30.28 REMARK 500 MET B 290 -36.37 -132.98 REMARK 500 THR B 318 160.38 69.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 447 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 235 OD1 REMARK 620 2 ASP A 235 OD2 48.2 REMARK 620 3 GLU A 260 OE2 66.5 96.5 REMARK 620 4 ASN A 289 OD1 117.9 160.0 63.5 REMARK 620 5 GLR A 448 O6B 58.2 106.1 56.5 64.4 REMARK 620 6 GLR A 448 O6A 85.4 114.2 104.4 74.0 49.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 447 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 235 OD1 REMARK 620 2 ASP B 235 OD2 47.0 REMARK 620 3 GLU B 260 OE2 64.2 95.4 REMARK 620 4 ASN B 289 OD1 118.3 162.6 67.5 REMARK 620 5 GLR B 448 O6B 57.2 103.3 57.8 65.5 REMARK 620 6 GLR B 448 O6A 83.4 108.1 106.1 75.3 49.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 447 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 447 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLR A 448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLR B 448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 449 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 449 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EC8 RELATED DB: PDB REMARK 900 THE WILD TYPE PROTEIN LIGANDED WITH THE SAME INHIBITOR DBREF 3PWI A 1 446 UNP E2KTD9 E2KTD9_ECO57 1 446 DBREF 3PWI B 1 446 UNP E2KTD9 E2KTD9_ECO57 1 446 SEQADV 3PWI ALA A 34 UNP E2KTD9 PRO 34 ENGINEERED MUTATION SEQADV 3PWI ALA B 34 UNP E2KTD9 PRO 34 ENGINEERED MUTATION SEQRES 1 A 446 MET SER SER GLN PHE THR THR PRO VAL VAL THR GLU MET SEQRES 2 A 446 GLN VAL ILE PRO VAL ALA GLY HIS ASP SER MET LEU MET SEQRES 3 A 446 ASN LEU SER GLY ALA HIS ALA ALA PHE PHE THR ARG ASN SEQRES 4 A 446 ILE VAL ILE ILE LYS ASP ASN SER GLY HIS THR GLY VAL SEQRES 5 A 446 GLY GLU ILE PRO GLY GLY GLU LYS ILE ARG LYS THR LEU SEQRES 6 A 446 GLU ASP ALA ILE PRO LEU VAL VAL GLY LYS THR LEU GLY SEQRES 7 A 446 GLU TYR LYS ASN VAL LEU THR LEU VAL ARG ASN THR PHE SEQRES 8 A 446 ALA ASP ARG ASP ALA GLY GLY ARG GLY LEU GLN THR PHE SEQRES 9 A 446 ASP LEU ARG THR THR ILE HIS VAL VAL THR GLY ILE GLU SEQRES 10 A 446 ALA ALA MET LEU ASP LEU LEU GLY GLN HIS LEU GLY VAL SEQRES 11 A 446 ASN VAL ALA SER LEU LEU GLY ASP GLY GLN GLN ARG SER SEQRES 12 A 446 GLU VAL GLU MET LEU GLY TYR LEU PHE PHE VAL GLY ASN SEQRES 13 A 446 ARG LYS ALA THR PRO LEU PRO TYR GLN SER GLN PRO ASP SEQRES 14 A 446 ASP SER CYS ASP TRP TYR ARG LEU ARG HIS GLU GLU ALA SEQRES 15 A 446 MET THR PRO ASP ALA VAL VAL ARG LEU ALA GLU ALA ALA SEQRES 16 A 446 TYR GLU LYS TYR GLY PHE ASN ASP PHE LYS LEU LYS GLY SEQRES 17 A 446 GLY VAL LEU ALA GLY GLU GLU GLU ALA GLU SER ILE VAL SEQRES 18 A 446 ALA LEU ALA GLN ARG PHE PRO GLN ALA ARG ILE THR LEU SEQRES 19 A 446 ASP PRO ASN GLY ALA TRP SER LEU ASN GLU ALA ILE LYS SEQRES 20 A 446 ILE GLY LYS TYR LEU LYS GLY SER LEU ALA TYR ALA GLU SEQRES 21 A 446 ASP PRO CYS GLY ALA GLU GLN GLY PHE SER GLY ARG GLU SEQRES 22 A 446 VAL MET ALA GLU PHE ARG ARG ALA THR GLY LEU PRO THR SEQRES 23 A 446 ALA THR ASN MET ILE ALA THR ASP TRP ARG GLN MET GLY SEQRES 24 A 446 HIS THR LEU SER LEU GLN SER VAL ASP ILE PRO LEU ALA SEQRES 25 A 446 ASP PRO HIS PHE TRP THR MET GLN GLY SER VAL ARG VAL SEQRES 26 A 446 ALA GLN MET CYS HIS GLU PHE GLY LEU THR TRP GLY SER SEQRES 27 A 446 HIS SER ASN ASN HIS PHE ASP ILE SER LEU ALA MET PHE SEQRES 28 A 446 THR HIS VAL ALA ALA ALA ALA PRO GLY LYS ILE THR ALA SEQRES 29 A 446 ILE ASP THR HIS TRP ILE TRP GLN GLU GLY ASN GLN ARG SEQRES 30 A 446 LEU THR LYS GLU PRO PHE GLU ILE LYS GLY GLY LEU VAL SEQRES 31 A 446 GLN VAL PRO GLU LYS PRO GLY LEU GLY VAL GLU ILE ASP SEQRES 32 A 446 MET ASP GLN VAL MET LYS ALA HIS GLU LEU TYR GLN LYS SEQRES 33 A 446 HIS GLY LEU GLY ALA ARG ASP ASP ALA MET GLY MET GLN SEQRES 34 A 446 TYR LEU ILE PRO GLY TRP THR PHE ASP ASN LYS ARG PRO SEQRES 35 A 446 CYS MET VAL ARG SEQRES 1 B 446 MET SER SER GLN PHE THR THR PRO VAL VAL THR GLU MET SEQRES 2 B 446 GLN VAL ILE PRO VAL ALA GLY HIS ASP SER MET LEU MET SEQRES 3 B 446 ASN LEU SER GLY ALA HIS ALA ALA PHE PHE THR ARG ASN SEQRES 4 B 446 ILE VAL ILE ILE LYS ASP ASN SER GLY HIS THR GLY VAL SEQRES 5 B 446 GLY GLU ILE PRO GLY GLY GLU LYS ILE ARG LYS THR LEU SEQRES 6 B 446 GLU ASP ALA ILE PRO LEU VAL VAL GLY LYS THR LEU GLY SEQRES 7 B 446 GLU TYR LYS ASN VAL LEU THR LEU VAL ARG ASN THR PHE SEQRES 8 B 446 ALA ASP ARG ASP ALA GLY GLY ARG GLY LEU GLN THR PHE SEQRES 9 B 446 ASP LEU ARG THR THR ILE HIS VAL VAL THR GLY ILE GLU SEQRES 10 B 446 ALA ALA MET LEU ASP LEU LEU GLY GLN HIS LEU GLY VAL SEQRES 11 B 446 ASN VAL ALA SER LEU LEU GLY ASP GLY GLN GLN ARG SER SEQRES 12 B 446 GLU VAL GLU MET LEU GLY TYR LEU PHE PHE VAL GLY ASN SEQRES 13 B 446 ARG LYS ALA THR PRO LEU PRO TYR GLN SER GLN PRO ASP SEQRES 14 B 446 ASP SER CYS ASP TRP TYR ARG LEU ARG HIS GLU GLU ALA SEQRES 15 B 446 MET THR PRO ASP ALA VAL VAL ARG LEU ALA GLU ALA ALA SEQRES 16 B 446 TYR GLU LYS TYR GLY PHE ASN ASP PHE LYS LEU LYS GLY SEQRES 17 B 446 GLY VAL LEU ALA GLY GLU GLU GLU ALA GLU SER ILE VAL SEQRES 18 B 446 ALA LEU ALA GLN ARG PHE PRO GLN ALA ARG ILE THR LEU SEQRES 19 B 446 ASP PRO ASN GLY ALA TRP SER LEU ASN GLU ALA ILE LYS SEQRES 20 B 446 ILE GLY LYS TYR LEU LYS GLY SER LEU ALA TYR ALA GLU SEQRES 21 B 446 ASP PRO CYS GLY ALA GLU GLN GLY PHE SER GLY ARG GLU SEQRES 22 B 446 VAL MET ALA GLU PHE ARG ARG ALA THR GLY LEU PRO THR SEQRES 23 B 446 ALA THR ASN MET ILE ALA THR ASP TRP ARG GLN MET GLY SEQRES 24 B 446 HIS THR LEU SER LEU GLN SER VAL ASP ILE PRO LEU ALA SEQRES 25 B 446 ASP PRO HIS PHE TRP THR MET GLN GLY SER VAL ARG VAL SEQRES 26 B 446 ALA GLN MET CYS HIS GLU PHE GLY LEU THR TRP GLY SER SEQRES 27 B 446 HIS SER ASN ASN HIS PHE ASP ILE SER LEU ALA MET PHE SEQRES 28 B 446 THR HIS VAL ALA ALA ALA ALA PRO GLY LYS ILE THR ALA SEQRES 29 B 446 ILE ASP THR HIS TRP ILE TRP GLN GLU GLY ASN GLN ARG SEQRES 30 B 446 LEU THR LYS GLU PRO PHE GLU ILE LYS GLY GLY LEU VAL SEQRES 31 B 446 GLN VAL PRO GLU LYS PRO GLY LEU GLY VAL GLU ILE ASP SEQRES 32 B 446 MET ASP GLN VAL MET LYS ALA HIS GLU LEU TYR GLN LYS SEQRES 33 B 446 HIS GLY LEU GLY ALA ARG ASP ASP ALA MET GLY MET GLN SEQRES 34 B 446 TYR LEU ILE PRO GLY TRP THR PHE ASP ASN LYS ARG PRO SEQRES 35 B 446 CYS MET VAL ARG HET MG A 447 1 HET GLR A 448 13 HET GOL A 449 6 HET MG B 447 1 HET GLR B 448 13 HET GOL B 449 6 HETNAM MG MAGNESIUM ION HETNAM GLR 2,3-DIHYDROXY-5-OXO-HEXANEDIOATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MG 2(MG 2+) FORMUL 4 GLR 2(C6 H6 O7 2-) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 9 HOH *152(H2 O) HELIX 1 1 GLY A 58 VAL A 73 1 16 HELIX 2 2 THR A 76 GLY A 78 5 3 HELIX 3 3 GLU A 79 PHE A 91 1 13 HELIX 4 4 ALA A 92 ASP A 95 5 4 HELIX 5 5 THR A 108 GLY A 129 1 22 HELIX 6 6 ASN A 131 LEU A 136 5 6 HELIX 7 7 ASN A 156 THR A 160 5 5 HELIX 8 8 CYS A 172 ARG A 178 1 7 HELIX 9 9 THR A 184 GLY A 200 1 17 HELIX 10 10 ALA A 212 PHE A 227 1 16 HELIX 11 11 SER A 241 LEU A 252 1 12 HELIX 12 12 SER A 270 GLY A 283 1 14 HELIX 13 13 ASP A 294 GLN A 305 1 12 HELIX 14 14 ASP A 313 THR A 318 1 6 HELIX 15 15 THR A 318 GLY A 333 1 16 HELIX 16 16 PHE A 344 ALA A 356 1 13 HELIX 17 17 HIS A 368 GLU A 373 1 6 HELIX 18 18 ASP A 403 HIS A 417 1 15 HELIX 19 19 ASP A 424 ILE A 432 1 9 HELIX 20 20 GLY B 58 VAL B 73 1 16 HELIX 21 21 THR B 76 GLY B 78 5 3 HELIX 22 22 GLU B 79 PHE B 91 1 13 HELIX 23 23 ALA B 92 ALA B 96 5 5 HELIX 24 24 THR B 108 LEU B 128 1 21 HELIX 25 25 VAL B 132 LEU B 136 5 5 HELIX 26 26 ASN B 156 THR B 160 5 5 HELIX 27 27 CYS B 172 ARG B 178 1 7 HELIX 28 28 THR B 184 GLY B 200 1 17 HELIX 29 29 ALA B 212 PHE B 227 1 16 HELIX 30 30 SER B 241 LYS B 253 1 13 HELIX 31 31 SER B 270 GLY B 283 1 14 HELIX 32 32 ASP B 294 GLN B 305 1 12 HELIX 33 33 ASP B 313 THR B 318 1 6 HELIX 34 34 THR B 318 PHE B 332 1 15 HELIX 35 35 PHE B 344 ALA B 357 1 14 HELIX 36 36 HIS B 368 GLU B 373 1 6 HELIX 37 37 ASP B 403 HIS B 417 1 15 HELIX 38 38 ASP B 424 GLN B 429 1 6 SHEET 1 A 3 VAL A 10 HIS A 21 0 SHEET 2 A 3 PHE A 35 ASP A 45 -1 O LYS A 44 N THR A 11 SHEET 3 A 3 THR A 50 PRO A 56 -1 O GLY A 51 N ILE A 43 SHEET 1 B 3 GLY A 30 ALA A 31 0 SHEET 2 B 3 LEU A 25 ASN A 27 -1 N ASN A 27 O GLY A 30 SHEET 3 B 3 PHE A 153 VAL A 154 -1 O PHE A 153 N MET A 26 SHEET 1 C 2 GLU A 144 GLU A 146 0 SHEET 2 C 2 LEU A 389 GLN A 391 -1 O VAL A 390 N VAL A 145 SHEET 1 D 6 GLY A 149 LEU A 151 0 SHEET 2 D 6 PHE A 204 LYS A 207 1 O LYS A 205 N LEU A 151 SHEET 3 D 6 ILE A 232 ASP A 235 1 O THR A 233 N LEU A 206 SHEET 4 D 6 TYR A 258 GLU A 260 1 N TYR A 258 O ILE A 232 SHEET 5 D 6 THR A 286 THR A 288 1 O ALA A 287 N ALA A 259 SHEET 6 D 6 ILE A 309 PRO A 310 1 O ILE A 309 N THR A 286 SHEET 1 E 3 VAL B 10 HIS B 21 0 SHEET 2 E 3 PHE B 35 ASP B 45 -1 O LYS B 44 N THR B 11 SHEET 3 E 3 HIS B 49 PRO B 56 -1 O GLY B 51 N ILE B 43 SHEET 1 F 2 MET B 26 ASN B 27 0 SHEET 2 F 2 GLY B 30 ALA B 31 -1 O GLY B 30 N ASN B 27 SHEET 1 G 2 GLU B 144 GLU B 146 0 SHEET 2 G 2 LEU B 389 GLN B 391 -1 O VAL B 390 N VAL B 145 SHEET 1 H 3 GLY B 149 LEU B 151 0 SHEET 2 H 3 PHE B 204 LYS B 207 1 O LYS B 205 N LEU B 151 SHEET 3 H 3 ILE B 232 ASP B 235 1 O ASP B 235 N LEU B 206 SHEET 1 I 3 ALA B 259 GLU B 260 0 SHEET 2 I 3 THR B 286 THR B 288 1 O ALA B 287 N ALA B 259 SHEET 3 I 3 ILE B 309 PRO B 310 1 O ILE B 309 N THR B 286 LINK OD1 ASP A 235 MG MG A 447 1555 1555 2.30 LINK OD2 ASP A 235 MG MG A 447 1555 1555 2.91 LINK OE2 GLU A 260 MG MG A 447 1555 1555 2.73 LINK OD1 ASN A 289 MG MG A 447 1555 1555 2.29 LINK MG MG A 447 O6B GLR A 448 1555 1555 2.62 LINK MG MG A 447 O6A GLR A 448 1555 1555 2.64 LINK OD1 ASP B 235 MG MG B 447 1555 1555 2.44 LINK OD2 ASP B 235 MG MG B 447 1555 1555 2.95 LINK OE2 GLU B 260 MG MG B 447 1555 1555 2.66 LINK OD1 ASN B 289 MG MG B 447 1555 1555 2.39 LINK MG MG B 447 O6B GLR B 448 1555 1555 2.56 LINK MG MG B 447 O6A GLR B 448 1555 1555 2.67 SITE 1 AC1 6 ASP A 235 ASN A 237 GLU A 260 ASP A 261 SITE 2 AC1 6 ASN A 289 GLR A 448 SITE 1 AC2 6 ASP B 235 ASN B 237 GLU B 260 ASP B 261 SITE 2 AC2 6 ASN B 289 GLR B 448 SITE 1 AC3 17 ASN A 27 HIS A 32 THR A 103 TYR A 150 SITE 2 AC3 17 LYS A 205 LYS A 207 ASP A 235 ASN A 237 SITE 3 AC3 17 GLU A 260 ASN A 289 HIS A 339 SER A 340 SITE 4 AC3 17 ASN A 341 HIS A 368 ARG A 422 MG A 447 SITE 5 AC3 17 HOH A 492 SITE 1 AC4 18 ASN B 27 HIS B 32 THR B 103 TYR B 150 SITE 2 AC4 18 LYS B 205 LYS B 207 ASP B 235 ASN B 237 SITE 3 AC4 18 GLU B 260 ASN B 289 HIS B 339 SER B 340 SITE 4 AC4 18 ASN B 341 HIS B 368 ARG B 422 MG B 447 SITE 5 AC4 18 HOH B 455 HOH B 464 SITE 1 AC5 8 ARG A 280 GLY B 299 LEU B 302 SER B 303 SITE 2 AC5 8 PHE B 332 HOH B 523 HOH B 535 HOH B 544 SITE 1 AC6 8 GLY A 299 LEU A 302 SER A 303 GLN A 305 SITE 2 AC6 8 PHE A 332 HOH A 467 HOH A 485 ARG B 280 CRYST1 150.784 128.925 71.419 90.00 96.74 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006632 0.000000 0.000784 0.00000 SCALE2 0.000000 0.007756 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014099 0.00000