HEADER HYDROLASE 14-DEC-10 3PZO TITLE STRUCTURE OF THE HYPERTHERMOSTABLE ENDO-1,4-BETA-D-MANNANASE FROM TITLE 2 THERMOTOGA PETROPHILA RKU-1 IN COMPLEX WITH THREE MALTOSE MOLECULES COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANNAN ENDO-1,4-BETA-MANNOSIDASE. GLYCOSYL HYDROLASE FAMILY COMPND 3 5; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 32-393; COMPND 6 EC: 3.2.1.78; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA PETROPHILA RKU-1; SOURCE 3 ORGANISM_TAXID: 390874; SOURCE 4 STRAIN: RKU-1 / ATCC BAA-488 / DSM 13995; SOURCE 5 GENE: TPET_1542; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALPHA/BETA BARREL, GLYCOSYL HYDROLASE, SUGAR BINDING, SECRETED, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.R.SANTOS,A.N.MEZA,J.H.PAIVA,J.C.SILVA,R.RULLER,R.A.PRADE, AUTHOR 2 F.M.SQUINA,M.T.MURAKAMI REVDAT 3 21-FEB-24 3PZO 1 HETSYN REVDAT 2 29-JUL-20 3PZO 1 COMPND REMARK SEQADV HET REVDAT 2 2 1 HETNAM HETSYN FORMUL LINK REVDAT 2 3 1 SITE ATOM REVDAT 1 28-DEC-11 3PZO 0 JRNL AUTH C.R.SANTOS,A.N.MEZA,J.H.PAIVA,J.C.SILVA,R.RULLER,R.A.PRADE, JRNL AUTH 2 F.M.SQUINA,M.T.MURAKAMI JRNL TITL STRUCTURAL CHARACTERIZATION OF A NOVEL HYPERTHERMOSTABLE JRNL TITL 2 ENDO-1,4-BETA-D-MANNANASE FROM THERMOTOGA PETROPHILA RKU-1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 57815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3072 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3541 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.4010 REMARK 3 BIN FREE R VALUE SET COUNT : 196 REMARK 3 BIN FREE R VALUE : 0.4370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2927 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 291 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.24000 REMARK 3 B33 (A**2) : 0.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.074 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.077 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.336 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3092 ; 0.032 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4195 ; 2.551 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 356 ; 6.215 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 163 ;36.517 ;23.988 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 491 ;12.304 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;15.311 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 426 ; 0.200 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2400 ; 0.016 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1769 ; 1.485 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2845 ; 2.268 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1323 ; 3.316 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1350 ; 5.075 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3PZO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063010. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.4586 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59171 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 40.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8 M PHOSPHATE, 0.2 M SODIUM REMARK 280 CHLORIDE, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.64650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.04100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.65000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.04100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.64650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.65000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 11 REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 465 SER A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 HIS A 17 REMARK 465 HIS A 18 REMARK 465 HIS A 19 REMARK 465 HIS A 20 REMARK 465 SER A 21 REMARK 465 SER A 22 REMARK 465 GLY A 23 REMARK 465 LEU A 24 REMARK 465 VAL A 25 REMARK 465 PRO A 26 REMARK 465 ARG A 27 REMARK 465 GLY A 28 REMARK 465 SER A 29 REMARK 465 HIS A 30 REMARK 465 MET A 31 REMARK 465 LEU A 32 REMARK 465 ASN A 33 REMARK 465 GLY A 34 REMARK 465 LYS A 35 REMARK 465 GLU A 36 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 532 O HOH A 601 1.97 REMARK 500 OD1 ASP A 64 O HOH A 510 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 42 CB SER A 42 OG 0.085 REMARK 500 ASN A 104 CB ASN A 104 CG 0.140 REMARK 500 ARG A 160 CB ARG A 160 CG 0.166 REMARK 500 GLU A 163 CG GLU A 163 CD 0.122 REMARK 500 GLU A 163 CD GLU A 163 OE1 0.067 REMARK 500 GLU A 212 CG GLU A 212 CD 0.122 REMARK 500 GLU A 250 CG GLU A 250 CD -0.093 REMARK 500 PHE A 373 CE2 PHE A 373 CD2 0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 63 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 71 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 111 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP A 135 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 TYR A 143 CB - CG - CD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG A 185 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG A 185 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 GLU A 235 OE1 - CD - OE2 ANGL. DEV. = 7.8 DEGREES REMARK 500 TYR A 280 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 LEU A 338 CB - CG - CD1 ANGL. DEV. = -13.9 DEGREES REMARK 500 ASP A 345 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 345 CB - CG - OD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 364 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG A 364 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ASP A 371 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 387 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 49 -0.55 -151.52 REMARK 500 LEU A 76 88.21 -158.71 REMARK 500 PRO A 325 44.10 -81.52 REMARK 500 ASP A 360 75.54 -115.12 REMARK 500 ASP A 378 -161.14 -124.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PZ9 RELATED DB: PDB REMARK 900 NATIVE STRUCTURE REMARK 900 RELATED ID: 3PZG RELATED DB: PDB REMARK 900 I222 CRYSTAL FORM REMARK 900 RELATED ID: 3PZI RELATED DB: PDB REMARK 900 IN COMPLEX WITH BETA-D-GLUCOSE REMARK 900 RELATED ID: 3PZM RELATED DB: PDB REMARK 900 WITH GLYCEROL REMARK 900 RELATED ID: 3PZN RELATED DB: PDB REMARK 900 WITH CITRATE AND GLYCEROL REMARK 900 RELATED ID: 3PZQ RELATED DB: PDB REMARK 900 WITH MALTOSE DBREF 3PZO A 32 393 UNP A5IMX7 A5IMX7_THEP1 32 393 SEQADV 3PZO MET A 11 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO GLY A 12 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO SER A 13 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO SER A 14 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO HIS A 15 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO HIS A 16 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO HIS A 17 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO HIS A 18 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO HIS A 19 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO HIS A 20 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO SER A 21 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO SER A 22 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO GLY A 23 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO LEU A 24 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO VAL A 25 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO PRO A 26 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO ARG A 27 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO GLY A 28 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO SER A 29 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO HIS A 30 UNP A5IMX7 EXPRESSION TAG SEQADV 3PZO MET A 31 UNP A5IMX7 EXPRESSION TAG SEQRES 1 A 383 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 383 LEU VAL PRO ARG GLY SER HIS MET LEU ASN GLY LYS GLU SEQRES 3 A 383 PHE ARG PHE ILE GLY SER ASN ASN TYR TYR MET HIS TYR SEQRES 4 A 383 LYS SER ASN ARG MET ILE ASP SER VAL LEU GLU SER ALA SEQRES 5 A 383 ARG ASP MET GLY ILE LYS VAL LEU ARG ILE TRP GLY PHE SEQRES 6 A 383 LEU ASP GLY GLU SER TYR CYS ARG ASP LYS ASN THR TYR SEQRES 7 A 383 MET HIS PRO GLU PRO GLY VAL PHE GLY VAL PRO GLU GLY SEQRES 8 A 383 ILE SER ASN ALA GLN ASN GLY PHE GLU ARG LEU ASP TYR SEQRES 9 A 383 THR ILE ALA LYS ALA LYS GLU LEU GLY ILE LYS LEU ILE SEQRES 10 A 383 ILE VAL LEU VAL ASN ASN TRP ASP ASP PHE GLY GLY MET SEQRES 11 A 383 ASN GLN TYR VAL ARG TRP PHE GLY GLY THR HIS HIS ASP SEQRES 12 A 383 ASP PHE TYR ARG ASP GLU ARG ILE LYS GLU GLU TYR LYS SEQRES 13 A 383 LYS TYR VAL SER PHE LEU ILE ASN HIS VAL ASN VAL TYR SEQRES 14 A 383 THR GLY VAL PRO TYR ARG GLU GLU PRO THR ILE MET ALA SEQRES 15 A 383 TRP GLU LEU ALA ASN GLU LEU ARG CYS GLU THR ASP LYS SEQRES 16 A 383 SER GLY ASN THR LEU VAL GLU TRP VAL LYS GLU MET SER SEQRES 17 A 383 SER TYR ILE LYS SER LEU ASP PRO ASN HIS LEU VAL ALA SEQRES 18 A 383 VAL GLY ASP GLU GLY PHE PHE SER ASN TYR GLU GLY PHE SEQRES 19 A 383 LYS PRO TYR GLY GLY GLU ALA GLU TRP ALA TYR ASN GLY SEQRES 20 A 383 TRP SER GLY VAL ASP TRP LYS LYS LEU LEU SER ILE GLU SEQRES 21 A 383 THR VAL ASP PHE GLY THR PHE HIS LEU TYR PRO SER HIS SEQRES 22 A 383 TRP GLY VAL SER PRO GLU ASN TYR ALA GLN TRP GLY ALA SEQRES 23 A 383 LYS TRP ILE GLU ASP HIS ILE LYS ILE ALA LYS GLU ILE SEQRES 24 A 383 GLY LYS PRO VAL VAL LEU GLU GLU TYR GLY ILE PRO LYS SEQRES 25 A 383 SER ALA PRO VAL ASN ARG THR ALA ILE TYR ARG LEU TRP SEQRES 26 A 383 ASN ASP LEU VAL TYR ASP LEU GLY GLY ASP GLY ALA MET SEQRES 27 A 383 PHE TRP MET LEU ALA GLY ILE GLY GLU GLY SER ASP ARG SEQRES 28 A 383 ASP GLU ARG GLY TYR TYR PRO ASP TYR ASP GLY PHE ARG SEQRES 29 A 383 ILE VAL ASN ASP ASP SER PRO GLU ALA GLU LEU ILE ARG SEQRES 30 A 383 GLU TYR ALA LYS LEU PHE HET GLC B 1 12 HET GLC B 2 11 HET GLC C 1 12 HET GLC C 2 11 HET GOL A 401 6 HET GOL A 402 6 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GLC 4(C6 H12 O6) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *291(H2 O) HELIX 1 1 SER A 51 GLY A 66 1 16 HELIX 2 2 GLY A 78 ASN A 86 1 9 HELIX 3 3 GLY A 108 GLY A 123 1 16 HELIX 4 4 GLY A 138 PHE A 147 1 10 HELIX 5 5 HIS A 151 ARG A 157 5 7 HELIX 6 6 ASP A 158 ASN A 174 1 17 HELIX 7 7 PRO A 183 GLU A 187 5 5 HELIX 8 8 GLY A 207 ASP A 225 1 19 HELIX 9 9 PRO A 246 GLU A 250 5 5 HELIX 10 10 ALA A 251 TYR A 255 5 5 HELIX 11 11 ASP A 262 SER A 268 1 7 HELIX 12 12 TYR A 280 TRP A 284 5 5 HELIX 13 13 SER A 287 GLU A 289 5 3 HELIX 14 14 ASN A 290 GLY A 310 1 21 HELIX 15 15 ASN A 327 GLY A 343 1 17 HELIX 16 16 SER A 380 LYS A 391 1 12 SHEET 1 A 8 LEU A 229 ALA A 231 0 SHEET 2 A 8 ILE A 190 GLU A 194 1 N TRP A 193 O ALA A 231 SHEET 3 A 8 LYS A 125 VAL A 129 1 N LEU A 126 O MET A 191 SHEET 4 A 8 VAL A 69 TRP A 73 1 N ILE A 72 O ILE A 127 SHEET 5 A 8 PHE A 39 ASN A 44 1 N SER A 42 O ARG A 71 SHEET 6 A 8 GLY A 346 PHE A 349 1 O ALA A 347 N GLY A 41 SHEET 7 A 8 VAL A 313 TYR A 318 1 N LEU A 315 O MET A 348 SHEET 8 A 8 GLY A 275 LEU A 279 1 N GLY A 275 O VAL A 314 SHEET 1 B 2 THR A 87 TYR A 88 0 SHEET 2 B 2 GLN A 106 ASN A 107 1 O GLN A 106 N TYR A 88 LINK O4 GLC B 1 C1 GLC B 2 1555 1555 1.46 LINK O4 GLC C 1 C1 GLC C 2 1555 1555 1.49 CISPEP 1 TRP A 350 MET A 351 0 4.50 CRYST1 55.293 83.300 92.082 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018085 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012005 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010860 0.00000