HEADER IMMUNE SYSTEM 15-DEC-10 3Q0H TITLE STRUCTURE OF T-CELL IMMUNORECEPTOR WITH IMMUNOGLOBULIN AND ITIM TITLE 2 DOMAINS (TIGIT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: T CELL IMMUNORECEPTOR WITH IG AND ITIM DOMAINS; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: IG-LIKE V-TYPE DOMAIN RESIDUES 22-137; COMPND 5 SYNONYM: V-SET AND IMMUNOGLOBULIN DOMAIN-CONTAINING PROTEIN 9, V-SET COMPND 6 AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN 3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TIGIT, VSIG9, VSTM3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS IMMUNE RECEPTOR, ADHESION, STRUCTURAL GENOMICS, NEW YORK STRUCTURAL KEYWDS 2 GENOMICS RESEARCH CONSORTIUM, NYSGRC, PSI-BIOLOGY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR U.A.RAMAGOPAL,H.GUO,D.SAMANTA,S.G.NATHENSON,S.C.ALMO,NEW YORK AUTHOR 2 STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 4 13-SEP-23 3Q0H 1 SEQADV REVDAT 3 08-NOV-17 3Q0H 1 REMARK REVDAT 2 18-MAY-11 3Q0H 1 REMARK REVDAT 1 16-FEB-11 3Q0H 0 JRNL AUTH U.A.RAMAGOPAL,H.GUO,D.SAMANTA,S.G.NATHENSON,S.C.ALMO JRNL TITL STRUCTURE OF T-CELL IMMUNORECEPTOR WITH IMMUNOGLOBULIN AND JRNL TITL 2 ITIM DOMAINS (TIGIT) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 27504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1376 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1675 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1648 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.15000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.222 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1812 ; 0.015 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2495 ; 1.678 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 242 ; 7.027 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 78 ;39.235 ;25.641 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 289 ;15.661 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;15.852 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 287 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1407 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1149 ; 0.939 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1883 ; 1.782 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 663 ; 2.799 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 612 ; 4.412 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): -3.8080 -13.6700 29.8070 REMARK 3 T TENSOR REMARK 3 T11: 0.0426 T22: 0.0666 REMARK 3 T33: 0.1015 T12: 0.0165 REMARK 3 T13: -0.0580 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.3745 L22: 2.3888 REMARK 3 L33: 1.0475 L12: -0.3686 REMARK 3 L13: -0.2802 L23: -0.7259 REMARK 3 S TENSOR REMARK 3 S11: -0.0642 S12: -0.0097 S13: 0.0614 REMARK 3 S21: 0.1596 S22: 0.0046 S23: -0.1984 REMARK 3 S31: -0.0148 S32: 0.0352 S33: 0.0595 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6920 6.4450 19.5710 REMARK 3 T TENSOR REMARK 3 T11: 0.0658 T22: 0.0644 REMARK 3 T33: 0.0502 T12: 0.0152 REMARK 3 T13: 0.0325 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 1.5741 L22: 1.6573 REMARK 3 L33: 2.2492 L12: 0.5091 REMARK 3 L13: 0.4970 L23: -0.6509 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: -0.0808 S13: -0.0448 REMARK 3 S21: -0.0503 S22: 0.0085 S23: 0.0143 REMARK 3 S31: 0.0421 S32: 0.0539 S33: -0.0132 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REMARK 3 WITH TLS ADDED REMARK 3 REMARK 3 UNKNOWN DENSITY NEAR CYS48: NOT MODELED REMARK 4 REMARK 4 3Q0H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000063039. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27916 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.53500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1IKF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3M AMMONIUM SULFATE, 0.1M MES PH REMARK 280 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.33550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 130 REMARK 465 VAL A 131 REMARK 465 ALA A 132 REMARK 465 GLU A 133 REMARK 465 HIS A 134 REMARK 465 GLY A 135 REMARK 465 ALA A 136 REMARK 465 ARG A 137 REMARK 465 MET B 21 REMARK 465 MET B 22 REMARK 465 MET B 23 REMARK 465 THR B 24 REMARK 465 ALA B 132 REMARK 465 GLU B 133 REMARK 465 HIS B 134 REMARK 465 GLY B 135 REMARK 465 ALA B 136 REMARK 465 ARG B 137 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 69 CB CYS A 69 SG 0.109 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 69 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 63 43.43 31.78 REMARK 500 ASP A 63 44.78 31.78 REMARK 500 ARG B 84 31.38 -140.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-006165 RELATED DB: TARGETDB DBREF 3Q0H A 22 137 UNP Q495A1 TIGIT_HUMAN 22 137 DBREF 3Q0H B 22 137 UNP Q495A1 TIGIT_HUMAN 22 137 SEQADV 3Q0H MET A 21 UNP Q495A1 EXPRESSION TAG SEQADV 3Q0H MET B 21 UNP Q495A1 EXPRESSION TAG SEQRES 1 A 117 MET MET MET THR GLY THR ILE GLU THR THR GLY ASN ILE SEQRES 2 A 117 SER ALA GLU LYS GLY GLY SER ILE ILE LEU GLN CYS HIS SEQRES 3 A 117 LEU SER SER THR THR ALA GLN VAL THR GLN VAL ASN TRP SEQRES 4 A 117 GLU GLN GLN ASP GLN LEU LEU ALA ILE CYS ASN ALA ASP SEQRES 5 A 117 LEU GLY TRP HIS ILE SER PRO SER PHE LYS ASP ARG VAL SEQRES 6 A 117 ALA PRO GLY PRO GLY LEU GLY LEU THR LEU GLN SER LEU SEQRES 7 A 117 THR VAL ASN ASP THR GLY GLU TYR PHE CYS ILE TYR HIS SEQRES 8 A 117 THR TYR PRO ASP GLY THR TYR THR GLY ARG ILE PHE LEU SEQRES 9 A 117 GLU VAL LEU GLU SER SER VAL ALA GLU HIS GLY ALA ARG SEQRES 1 B 117 MET MET MET THR GLY THR ILE GLU THR THR GLY ASN ILE SEQRES 2 B 117 SER ALA GLU LYS GLY GLY SER ILE ILE LEU GLN CYS HIS SEQRES 3 B 117 LEU SER SER THR THR ALA GLN VAL THR GLN VAL ASN TRP SEQRES 4 B 117 GLU GLN GLN ASP GLN LEU LEU ALA ILE CYS ASN ALA ASP SEQRES 5 B 117 LEU GLY TRP HIS ILE SER PRO SER PHE LYS ASP ARG VAL SEQRES 6 B 117 ALA PRO GLY PRO GLY LEU GLY LEU THR LEU GLN SER LEU SEQRES 7 B 117 THR VAL ASN ASP THR GLY GLU TYR PHE CYS ILE TYR HIS SEQRES 8 B 117 THR TYR PRO ASP GLY THR TYR THR GLY ARG ILE PHE LEU SEQRES 9 B 117 GLU VAL LEU GLU SER SER VAL ALA GLU HIS GLY ALA ARG FORMUL 3 HOH *120(H2 O) HELIX 1 1 SER A 78 LYS A 82 5 5 HELIX 2 2 THR A 99 THR A 103 5 5 HELIX 3 3 PHE B 81 ASP B 83 5 3 HELIX 4 4 THR B 99 THR B 103 5 5 SHEET 1 A 2 THR A 26 THR A 29 0 SHEET 2 A 2 CYS A 45 SER A 48 -1 O HIS A 46 N GLU A 28 SHEET 1 B 6 ILE A 33 GLU A 36 0 SHEET 2 B 6 TYR A 118 LEU A 127 1 O GLU A 125 N ALA A 35 SHEET 3 B 6 GLY A 104 TYR A 113 -1 N TYR A 110 O TYR A 118 SHEET 4 B 6 GLN A 53 GLN A 61 -1 N GLU A 60 O PHE A 107 SHEET 5 B 6 GLN A 64 ASN A 70 -1 O LEU A 66 N TRP A 59 SHEET 6 B 6 GLY A 74 HIS A 76 -1 O HIS A 76 N ILE A 68 SHEET 1 C 3 ILE A 41 LEU A 43 0 SHEET 2 C 3 LEU A 93 LEU A 95 -1 O LEU A 93 N LEU A 43 SHEET 3 C 3 VAL A 85 PRO A 87 -1 N ALA A 86 O THR A 94 SHEET 1 D 2 THR B 26 THR B 29 0 SHEET 2 D 2 CYS B 45 SER B 48 -1 O HIS B 46 N GLU B 28 SHEET 1 E 6 ASN B 32 GLU B 36 0 SHEET 2 E 6 TYR B 118 LEU B 127 1 O LEU B 127 N ALA B 35 SHEET 3 E 6 GLY B 104 TYR B 113 -1 N TYR B 106 O ILE B 122 SHEET 4 E 6 GLN B 53 GLU B 60 -1 N ASN B 58 O ILE B 109 SHEET 5 E 6 LEU B 65 ASN B 70 -1 O LEU B 66 N TRP B 59 SHEET 6 E 6 GLY B 74 ILE B 77 -1 O HIS B 76 N ILE B 68 SHEET 1 F 3 ILE B 41 LEU B 43 0 SHEET 2 F 3 LEU B 93 LEU B 95 -1 O LEU B 93 N LEU B 43 SHEET 3 F 3 VAL B 85 PRO B 87 -1 N ALA B 86 O THR B 94 SSBOND 1 CYS A 45 CYS A 108 1555 1555 2.05 SSBOND 2 CYS B 45 CYS B 108 1555 1555 2.06 CISPEP 1 GLY A 88 PRO A 89 0 2.16 CISPEP 2 TYR A 113 PRO A 114 0 2.54 CISPEP 3 GLY B 88 PRO B 89 0 2.42 CISPEP 4 TYR B 113 PRO B 114 0 -1.38 CRYST1 39.951 74.671 43.346 90.00 92.39 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025031 0.000000 0.001045 0.00000 SCALE2 0.000000 0.013392 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023090 0.00000