data_3Q3D # _entry.id 3Q3D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3Q3D pdb_00003q3d 10.2210/pdb3q3d/pdb NDB NA0890 ? ? RCSB RCSB063142 ? ? WWPDB D_1000063142 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2024-02-21 6 'Structure model' 1 5 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site 7 6 'Structure model' entity_src_nat # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 4 'Structure model' '_software.version' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_struct_ref_seq_dif.details' 7 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3Q3D _pdbx_database_status.recvd_initial_deposition_date 2010-12-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3D6Y . unspecified PDB 3D6Z . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bachas, S.' 1 ? 'Eginton, C.' 2 ? 'Gunio, G.' 3 ? 'Wade, H.' 4 ? # _citation.id primary _citation.title 'Structural contributions to multidrug recognition in the multidrug resistance (MDR) gene regulator, BmrR.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 108 _citation.page_first 11046 _citation.page_last 11051 _citation.year 2011 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21690368 _citation.pdbx_database_id_DOI 10.1073/pnas.1104850108 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bachas, S.' 1 ? primary 'Eginton, C.' 2 ? primary 'Gunio, D.' 3 ? primary 'Wade, H.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Multidrug-efflux transporter 1 regulator' 33478.203 1 ? ? ? ? 2 polymer syn 'BmrR promoter DNA' 7058.536 1 ? ? ? ? 3 non-polymer syn PUROMYCIN 471.510 1 ? ? ? ? 4 water nat water 18.015 28 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEEL FAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGLGPENVLNASYSKLKKFIE SADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYI ADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRILDHHHHHH ; ;MKESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEEL FAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGLGPENVLNASYSKLKKFIE SADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYI ADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRILDHHHHHH ; A ? 2 polydeoxyribonucleotide no no ;(DG)(DA)(DC)(DC)(DC)(DT)(DC)(DC)(DC)(DC)(DT)(DT)(DA)(DG)(DG)(DG)(DG)(DA)(DG)(DG) (DG)(DT)(DC) ; GACCCTCCCCTTAGGGGAGGGTC B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 PUROMYCIN PUY 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 GLU n 1 4 SER n 1 5 TYR n 1 6 TYR n 1 7 SER n 1 8 ILE n 1 9 GLY n 1 10 GLU n 1 11 VAL n 1 12 SER n 1 13 LYS n 1 14 LEU n 1 15 ALA n 1 16 ASN n 1 17 VAL n 1 18 SER n 1 19 ILE n 1 20 LYS n 1 21 ALA n 1 22 LEU n 1 23 ARG n 1 24 TYR n 1 25 TYR n 1 26 ASP n 1 27 LYS n 1 28 ILE n 1 29 ASP n 1 30 LEU n 1 31 PHE n 1 32 LYS n 1 33 PRO n 1 34 ALA n 1 35 TYR n 1 36 VAL n 1 37 ASP n 1 38 PRO n 1 39 ASP n 1 40 THR n 1 41 SER n 1 42 TYR n 1 43 ARG n 1 44 TYR n 1 45 TYR n 1 46 THR n 1 47 ASP n 1 48 SER n 1 49 GLN n 1 50 LEU n 1 51 ILE n 1 52 HIS n 1 53 LEU n 1 54 ASP n 1 55 LEU n 1 56 ILE n 1 57 LYS n 1 58 SER n 1 59 LEU n 1 60 LYS n 1 61 TYR n 1 62 ILE n 1 63 GLY n 1 64 THR n 1 65 PRO n 1 66 LEU n 1 67 GLU n 1 68 GLU n 1 69 MET n 1 70 LYS n 1 71 LYS n 1 72 ALA n 1 73 GLN n 1 74 ASP n 1 75 LEU n 1 76 GLU n 1 77 MET n 1 78 GLU n 1 79 GLU n 1 80 LEU n 1 81 PHE n 1 82 ALA n 1 83 PHE n 1 84 TYR n 1 85 THR n 1 86 GLU n 1 87 GLN n 1 88 GLU n 1 89 ARG n 1 90 GLN n 1 91 ILE n 1 92 ARG n 1 93 GLU n 1 94 LYS n 1 95 LEU n 1 96 ASP n 1 97 PHE n 1 98 LEU n 1 99 SER n 1 100 ALA n 1 101 LEU n 1 102 GLU n 1 103 GLN n 1 104 THR n 1 105 ILE n 1 106 SER n 1 107 LEU n 1 108 VAL n 1 109 LYS n 1 110 LYS n 1 111 ARG n 1 112 MET n 1 113 LYS n 1 114 ARG n 1 115 GLN n 1 116 MET n 1 117 GLU n 1 118 TYR n 1 119 PRO n 1 120 ALA n 1 121 LEU n 1 122 GLY n 1 123 GLU n 1 124 VAL n 1 125 PHE n 1 126 VAL n 1 127 LEU n 1 128 ASP n 1 129 GLU n 1 130 GLU n 1 131 GLU n 1 132 ILE n 1 133 ARG n 1 134 ILE n 1 135 ILE n 1 136 GLN n 1 137 THR n 1 138 GLU n 1 139 ALA n 1 140 GLU n 1 141 GLY n 1 142 LEU n 1 143 GLY n 1 144 PRO n 1 145 GLU n 1 146 ASN n 1 147 VAL n 1 148 LEU n 1 149 ASN n 1 150 ALA n 1 151 SER n 1 152 TYR n 1 153 SER n 1 154 LYS n 1 155 LEU n 1 156 LYS n 1 157 LYS n 1 158 PHE n 1 159 ILE n 1 160 GLU n 1 161 SER n 1 162 ALA n 1 163 ASP n 1 164 GLY n 1 165 PHE n 1 166 THR n 1 167 ASN n 1 168 ASN n 1 169 SER n 1 170 TYR n 1 171 GLY n 1 172 ALA n 1 173 THR n 1 174 PHE n 1 175 SER n 1 176 PHE n 1 177 GLN n 1 178 PRO n 1 179 TYR n 1 180 THR n 1 181 SER n 1 182 ILE n 1 183 ASP n 1 184 GLU n 1 185 MET n 1 186 THR n 1 187 TYR n 1 188 ARG n 1 189 HIS n 1 190 ILE n 1 191 PHE n 1 192 THR n 1 193 PRO n 1 194 VAL n 1 195 LEU n 1 196 THR n 1 197 ASN n 1 198 LYS n 1 199 GLN n 1 200 ILE n 1 201 SER n 1 202 SER n 1 203 ILE n 1 204 THR n 1 205 PRO n 1 206 ASP n 1 207 MET n 1 208 GLU n 1 209 ILE n 1 210 THR n 1 211 THR n 1 212 ILE n 1 213 PRO n 1 214 LYS n 1 215 GLY n 1 216 ARG n 1 217 TYR n 1 218 ALA n 1 219 CYS n 1 220 ILE n 1 221 ALA n 1 222 TYR n 1 223 ASN n 1 224 PHE n 1 225 SER n 1 226 PRO n 1 227 GLU n 1 228 HIS n 1 229 TYR n 1 230 PHE n 1 231 LEU n 1 232 ASN n 1 233 LEU n 1 234 GLN n 1 235 LYS n 1 236 LEU n 1 237 ILE n 1 238 LYS n 1 239 TYR n 1 240 ILE n 1 241 ALA n 1 242 ASP n 1 243 ARG n 1 244 GLN n 1 245 LEU n 1 246 THR n 1 247 VAL n 1 248 VAL n 1 249 SER n 1 250 ASP n 1 251 VAL n 1 252 TYR n 1 253 GLU n 1 254 LEU n 1 255 ILE n 1 256 ILE n 1 257 PRO n 1 258 ILE n 1 259 HIS n 1 260 TYR n 1 261 SER n 1 262 PRO n 1 263 LYS n 1 264 LYS n 1 265 GLN n 1 266 GLU n 1 267 GLU n 1 268 TYR n 1 269 ARG n 1 270 VAL n 1 271 GLU n 1 272 MET n 1 273 LYS n 1 274 ILE n 1 275 ARG n 1 276 ILE n 1 277 LEU n 1 278 ASP n 1 279 HIS n 1 280 HIS n 1 281 HIS n 1 282 HIS n 1 283 HIS n 1 284 HIS n 2 1 DG n 2 2 DA n 2 3 DC n 2 4 DC n 2 5 DC n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DC n 2 10 DC n 2 11 DT n 2 12 DT n 2 13 DA n 2 14 DG n 2 15 DG n 2 16 DG n 2 17 DG n 2 18 DA n 2 19 DG n 2 20 DG n 2 21 DG n 2 22 DT n 2 23 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'bmrR, bmr1R, BSU24020' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details '23 bp promoter of Bmr efflux pump gene synthesized by IDT' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PUY 'RNA linking' . PUROMYCIN ? 'C22 H29 N7 O5' 471.510 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 TYR 35 35 35 TYR TYR A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 MET 69 69 69 MET MET A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 MET 77 77 77 MET MET A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 MET 112 112 112 MET MET A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 MET 116 116 116 MET MET A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 VAL 124 124 124 VAL VAL A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 GLU 145 145 145 GLU GLU A . n A 1 146 ASN 146 146 146 ASN ASN A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 ASN 149 149 149 ASN ASN A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 SER 151 151 151 SER SER A . n A 1 152 TYR 152 152 152 TYR TYR A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 LYS 156 156 156 LYS LYS A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 THR 166 166 166 THR THR A . n A 1 167 ASN 167 167 167 ASN ASN A . n A 1 168 ASN 168 168 168 ASN ASN A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 TYR 170 170 170 TYR TYR A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 THR 173 173 173 THR THR A . n A 1 174 PHE 174 174 174 PHE PHE A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 GLN 177 177 177 GLN GLN A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 TYR 179 179 179 TYR TYR A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 SER 181 181 181 SER SER A . n A 1 182 ILE 182 182 182 ILE ILE A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 MET 185 185 185 MET MET A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 TYR 187 187 187 TYR TYR A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 HIS 189 189 189 HIS HIS A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 PHE 191 191 191 PHE PHE A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 PRO 193 193 193 PRO PRO A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 ASN 197 197 197 ASN ASN A . n A 1 198 LYS 198 198 198 LYS LYS A . n A 1 199 GLN 199 199 199 GLN GLN A . n A 1 200 ILE 200 200 200 ILE ILE A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 THR 204 204 204 THR THR A . n A 1 205 PRO 205 205 205 PRO PRO A . n A 1 206 ASP 206 206 206 ASP ASP A . n A 1 207 MET 207 207 207 MET MET A . n A 1 208 GLU 208 208 208 GLU GLU A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 THR 210 210 210 THR THR A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 PRO 213 213 213 PRO PRO A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 ARG 216 216 216 ARG ARG A . n A 1 217 TYR 217 217 217 TYR TYR A . n A 1 218 ALA 218 218 218 ALA ALA A . n A 1 219 CYS 219 219 219 CYS CYS A . n A 1 220 ILE 220 220 220 ILE ILE A . n A 1 221 ALA 221 221 221 ALA ALA A . n A 1 222 TYR 222 222 222 TYR TYR A . n A 1 223 ASN 223 223 223 ASN ASN A . n A 1 224 PHE 224 224 224 PHE PHE A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 PRO 226 226 226 PRO PRO A . n A 1 227 GLU 227 227 227 GLU GLU A . n A 1 228 HIS 228 228 228 HIS HIS A . n A 1 229 TYR 229 229 229 TYR TYR A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 ASN 232 232 232 ASN ASN A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 GLN 234 234 234 GLN GLN A . n A 1 235 LYS 235 235 235 LYS LYS A . n A 1 236 LEU 236 236 236 LEU LEU A . n A 1 237 ILE 237 237 237 ILE ILE A . n A 1 238 LYS 238 238 238 LYS LYS A . n A 1 239 TYR 239 239 239 TYR TYR A . n A 1 240 ILE 240 240 240 ILE ILE A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 ASP 242 242 242 ASP ASP A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 GLN 244 244 244 GLN GLN A . n A 1 245 LEU 245 245 245 LEU LEU A . n A 1 246 THR 246 246 246 THR THR A . n A 1 247 VAL 247 247 247 VAL VAL A . n A 1 248 VAL 248 248 248 VAL VAL A . n A 1 249 SER 249 249 249 SER SER A . n A 1 250 ASP 250 250 250 ASP ASP A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 TYR 252 252 252 TYR TYR A . n A 1 253 GLU 253 253 253 GLU GLU A . n A 1 254 LEU 254 254 254 LEU LEU A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ILE 256 256 256 ILE ILE A . n A 1 257 PRO 257 257 257 PRO PRO A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 HIS 259 259 259 HIS HIS A . n A 1 260 TYR 260 260 260 TYR TYR A . n A 1 261 SER 261 261 261 SER SER A . n A 1 262 PRO 262 262 262 PRO PRO A . n A 1 263 LYS 263 263 263 LYS LYS A . n A 1 264 LYS 264 264 264 LYS LYS A . n A 1 265 GLN 265 265 265 GLN GLN A . n A 1 266 GLU 266 266 266 GLU GLU A . n A 1 267 GLU 267 267 267 GLU GLU A . n A 1 268 TYR 268 268 268 TYR TYR A . n A 1 269 ARG 269 269 269 ARG ARG A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 GLU 271 271 271 GLU GLU A . n A 1 272 MET 272 272 272 MET MET A . n A 1 273 LYS 273 273 273 LYS LYS A . n A 1 274 ILE 274 274 274 ILE ILE A . n A 1 275 ARG 275 275 275 ARG ARG A . n A 1 276 ILE 276 276 276 ILE ILE A . n A 1 277 LEU 277 277 277 LEU LEU A . n A 1 278 ASP 278 278 ? ? ? A . n A 1 279 HIS 279 279 ? ? ? A . n A 1 280 HIS 280 280 ? ? ? A . n A 1 281 HIS 281 281 ? ? ? A . n A 1 282 HIS 282 282 ? ? ? A . n A 1 283 HIS 283 283 ? ? ? A . n A 1 284 HIS 284 284 ? ? ? A . n B 2 1 DG 1 -12 -12 DG DG B . n B 2 2 DA 2 -11 -11 DA DA B . n B 2 3 DC 3 -10 -10 DC DC B . n B 2 4 DC 4 -9 -9 DC DC B . n B 2 5 DC 5 -8 -8 DC DC B . n B 2 6 DT 6 -7 -7 DT DT B . n B 2 7 DC 7 -6 -6 DC DC B . n B 2 8 DC 8 -5 -5 DC DC B . n B 2 9 DC 9 -4 -4 DC DC B . n B 2 10 DC 10 -3 -3 DC DC B . n B 2 11 DT 11 -2 -2 DT DT B . n B 2 12 DT 12 1 1 DT DT B . n B 2 13 DA 13 2 2 DA DA B . n B 2 14 DG 14 3 3 DG DG B . n B 2 15 DG 15 4 4 DG DG B . n B 2 16 DG 16 5 5 DG DG B . n B 2 17 DG 17 6 6 DG DG B . n B 2 18 DA 18 7 7 DA DA B . n B 2 19 DG 19 8 8 DG DG B . n B 2 20 DG 20 9 9 DG DG B . n B 2 21 DG 21 10 10 DG DG B . n B 2 22 DT 22 11 11 DT DT B . n B 2 23 DC 23 12 12 DC DC B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PUY 1 6409 6409 PUY PUY A . D 4 HOH 1 286 286 HOH HOH A . D 4 HOH 2 287 287 HOH HOH A . D 4 HOH 3 288 288 HOH HOH A . D 4 HOH 4 289 289 HOH HOH A . D 4 HOH 5 290 290 HOH HOH A . D 4 HOH 6 291 291 HOH HOH A . D 4 HOH 7 292 292 HOH HOH A . D 4 HOH 8 293 293 HOH HOH A . D 4 HOH 9 294 294 HOH HOH A . D 4 HOH 10 295 295 HOH HOH A . D 4 HOH 11 296 296 HOH HOH A . D 4 HOH 12 297 297 HOH HOH A . D 4 HOH 13 298 298 HOH HOH A . D 4 HOH 14 299 299 HOH HOH A . D 4 HOH 15 300 300 HOH HOH A . D 4 HOH 16 301 301 HOH HOH A . D 4 HOH 17 302 302 HOH HOH A . D 4 HOH 18 303 303 HOH HOH A . D 4 HOH 19 304 304 HOH HOH A . D 4 HOH 20 305 305 HOH HOH A . D 4 HOH 21 306 306 HOH HOH A . D 4 HOH 22 307 307 HOH HOH A . D 4 HOH 23 308 308 HOH HOH A . D 4 HOH 24 309 309 HOH HOH A . D 4 HOH 25 310 310 HOH HOH A . D 4 HOH 26 311 311 HOH HOH A . E 4 HOH 1 92 92 HOH HOH B . E 4 HOH 2 118 118 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 13 ? CG ? A LYS 13 CG 2 1 Y 1 A LYS 13 ? CD ? A LYS 13 CD 3 1 Y 1 A LYS 13 ? CE ? A LYS 13 CE 4 1 Y 1 A LYS 13 ? NZ ? A LYS 13 NZ 5 1 Y 1 A LYS 20 ? CG ? A LYS 20 CG 6 1 Y 1 A LYS 20 ? CD ? A LYS 20 CD 7 1 Y 1 A LYS 20 ? CE ? A LYS 20 CE 8 1 Y 1 A LYS 20 ? NZ ? A LYS 20 NZ 9 1 Y 1 A LYS 27 ? CG ? A LYS 27 CG 10 1 Y 1 A LYS 27 ? CD ? A LYS 27 CD 11 1 Y 1 A LYS 27 ? CE ? A LYS 27 CE 12 1 Y 1 A LYS 27 ? NZ ? A LYS 27 NZ 13 1 Y 1 A LYS 71 ? CG ? A LYS 71 CG 14 1 Y 1 A LYS 71 ? CD ? A LYS 71 CD 15 1 Y 1 A LYS 71 ? CE ? A LYS 71 CE 16 1 Y 1 A LYS 71 ? NZ ? A LYS 71 NZ 17 1 Y 1 A GLU 76 ? CG ? A GLU 76 CG 18 1 Y 1 A GLU 76 ? CD ? A GLU 76 CD 19 1 Y 1 A GLU 76 ? OE1 ? A GLU 76 OE1 20 1 Y 1 A GLU 76 ? OE2 ? A GLU 76 OE2 21 1 Y 1 A GLU 78 ? CG ? A GLU 78 CG 22 1 Y 1 A GLU 78 ? CD ? A GLU 78 CD 23 1 Y 1 A GLU 78 ? OE1 ? A GLU 78 OE1 24 1 Y 1 A GLU 78 ? OE2 ? A GLU 78 OE2 25 1 Y 1 A GLU 79 ? CG ? A GLU 79 CG 26 1 Y 1 A GLU 79 ? CD ? A GLU 79 CD 27 1 Y 1 A GLU 79 ? OE1 ? A GLU 79 OE1 28 1 Y 1 A GLU 79 ? OE2 ? A GLU 79 OE2 29 1 Y 1 A ARG 92 ? CG ? A ARG 92 CG 30 1 Y 1 A ARG 92 ? CD ? A ARG 92 CD 31 1 Y 1 A ARG 92 ? NE ? A ARG 92 NE 32 1 Y 1 A ARG 92 ? CZ ? A ARG 92 CZ 33 1 Y 1 A ARG 92 ? NH1 ? A ARG 92 NH1 34 1 Y 1 A ARG 92 ? NH2 ? A ARG 92 NH2 35 1 Y 1 A GLU 93 ? CG ? A GLU 93 CG 36 1 Y 1 A GLU 93 ? CD ? A GLU 93 CD 37 1 Y 1 A GLU 93 ? OE1 ? A GLU 93 OE1 38 1 Y 1 A GLU 93 ? OE2 ? A GLU 93 OE2 39 1 Y 1 A GLN 103 ? CG ? A GLN 103 CG 40 1 Y 1 A GLN 103 ? CD ? A GLN 103 CD 41 1 Y 1 A GLN 103 ? OE1 ? A GLN 103 OE1 42 1 Y 1 A GLN 103 ? NE2 ? A GLN 103 NE2 43 1 Y 1 A LYS 110 ? CG ? A LYS 110 CG 44 1 Y 1 A LYS 110 ? CD ? A LYS 110 CD 45 1 Y 1 A LYS 110 ? CE ? A LYS 110 CE 46 1 Y 1 A LYS 110 ? NZ ? A LYS 110 NZ 47 1 Y 1 A LYS 113 ? CG ? A LYS 113 CG 48 1 Y 1 A LYS 113 ? CD ? A LYS 113 CD 49 1 Y 1 A LYS 113 ? CE ? A LYS 113 CE 50 1 Y 1 A LYS 113 ? NZ ? A LYS 113 NZ 51 1 Y 1 A PHE 125 ? CG ? A PHE 125 CG 52 1 Y 1 A PHE 125 ? CD1 ? A PHE 125 CD1 53 1 Y 1 A PHE 125 ? CD2 ? A PHE 125 CD2 54 1 Y 1 A PHE 125 ? CE1 ? A PHE 125 CE1 55 1 Y 1 A PHE 125 ? CE2 ? A PHE 125 CE2 56 1 Y 1 A PHE 125 ? CZ ? A PHE 125 CZ 57 1 Y 1 A GLU 140 ? CG ? A GLU 140 CG 58 1 Y 1 A GLU 140 ? CD ? A GLU 140 CD 59 1 Y 1 A GLU 140 ? OE1 ? A GLU 140 OE1 60 1 Y 1 A GLU 140 ? OE2 ? A GLU 140 OE2 61 1 Y 1 A LYS 198 ? CG ? A LYS 198 CG 62 1 Y 1 A LYS 198 ? CD ? A LYS 198 CD 63 1 Y 1 A LYS 198 ? CE ? A LYS 198 CE 64 1 Y 1 A LYS 198 ? NZ ? A LYS 198 NZ 65 1 Y 1 A LYS 238 ? CG ? A LYS 238 CG 66 1 Y 1 A LYS 238 ? CD ? A LYS 238 CD 67 1 Y 1 A LYS 238 ? CE ? A LYS 238 CE 68 1 Y 1 A LYS 238 ? NZ ? A LYS 238 NZ 69 1 Y 1 A GLN 244 ? CG ? A GLN 244 CG 70 1 Y 1 A GLN 244 ? CD ? A GLN 244 CD 71 1 Y 1 A GLN 244 ? OE1 ? A GLN 244 OE1 72 1 Y 1 A GLN 244 ? NE2 ? A GLN 244 NE2 73 1 Y 1 A LYS 263 ? CG ? A LYS 263 CG 74 1 Y 1 A LYS 263 ? CD ? A LYS 263 CD 75 1 Y 1 A LYS 263 ? CE ? A LYS 263 CE 76 1 Y 1 A LYS 263 ? NZ ? A LYS 263 NZ 77 1 Y 1 A LYS 264 ? CG ? A LYS 264 CG 78 1 Y 1 A LYS 264 ? CD ? A LYS 264 CD 79 1 Y 1 A LYS 264 ? CE ? A LYS 264 CE 80 1 Y 1 A LYS 264 ? NZ ? A LYS 264 NZ 81 1 Y 1 A GLU 266 ? CG ? A GLU 266 CG 82 1 Y 1 A GLU 266 ? CD ? A GLU 266 CD 83 1 Y 1 A GLU 266 ? OE1 ? A GLU 266 OE1 84 1 Y 1 A GLU 266 ? OE2 ? A GLU 266 OE2 85 1 Y 1 A LEU 277 ? CG ? A LEU 277 CG 86 1 Y 1 A LEU 277 ? CD1 ? A LEU 277 CD1 87 1 Y 1 A LEU 277 ? CD2 ? A LEU 277 CD2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0102 ? 1 CNS refinement . ? 2 MAR345dtb 'data collection' . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 CNS phasing . ? 6 # _cell.entry_id 3Q3D _cell.length_a 106.486 _cell.length_b 106.486 _cell.length_c 145.403 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3Q3D _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3Q3D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.08 _exptl_crystal.density_percent_sol 75.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.0 M Sodium Malonate ) 0.05% jeffamine-M600 pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2009-06-24 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength 0.97946 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3Q3D _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35.841 _reflns.d_resolution_high 2.785 _reflns.number_obs 17912 _reflns.number_all ? _reflns.percent_possible_obs 83.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.79 _reflns_shell.d_res_low 2.86 _reflns_shell.percent_possible_all 38.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3Q3D _refine.ls_number_reflns_obs 17049 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.84 _refine.ls_d_res_high 2.79 _refine.ls_percent_reflns_obs 83.0 _refine.ls_R_factor_obs 0.220 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.218 _refine.ls_R_factor_R_free 0.262 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 862 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.909 _refine.B_iso_mean 73.76 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.317 _refine.overall_SU_ML 0.244 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 24.779 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2195 _refine_hist.pdbx_number_atoms_nucleic_acid 468 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 2725 _refine_hist.d_res_high 2.79 _refine_hist.d_res_low 35.84 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 2824 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.816 2.205 ? 3926 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.974 5.000 ? 275 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.101 24.158 ? 101 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.964 15.000 ? 378 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.458 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.106 0.200 ? 447 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 1963 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.775 1.500 ? 1389 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.549 2.000 ? 2246 'X-RAY DIFFRACTION' ? r_scbond_it 2.551 3.000 ? 1435 'X-RAY DIFFRACTION' ? r_scangle_it 4.310 4.500 ? 1680 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.79 _refine_ls_shell.d_res_low 2.86 _refine_ls_shell.number_reflns_R_work 583 _refine_ls_shell.R_factor_R_work 0.3780 _refine_ls_shell.percent_reflns_obs 38.82 _refine_ls_shell.R_factor_R_free 0.4100 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 18 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 3Q3D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3Q3D _struct.title 'Crystal structure of BmrR bound to puromycin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3Q3D _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR/DNA/ANTIBIOTIC' _struct_keywords.text 'Protein-DNA complex, Multi-drug binding, antibiotic, Transcription regulator, TRANSCRIPTION REGULATOR-DNA-ANTIBIOTIC complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP BMRR_BACSU P39075 1 ;MKESYYSIGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEEL FAFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIRIIQTEAEGIGPENVLNASYSKLKKFIE SADGFTNNSYGATFSFQPYTSIDEMTYRHIFTPVLTNKQISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYI ADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRIAE ; 1 ? 2 PDB 3Q3D 3Q3D 2 GACCCTCCCCTTAGGGGAGGGTC ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3Q3D A 1 ? 278 ? P39075 1 ? 278 ? 1 278 2 2 3Q3D B 1 ? 23 ? 3Q3D -12 ? 12 ? -12 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3Q3D LEU A 142 ? UNP P39075 ILE 142 conflict 142 1 1 3Q3D LEU A 277 ? UNP P39075 ALA 277 conflict 277 2 1 3Q3D ASP A 278 ? UNP P39075 GLU 278 conflict 278 3 1 3Q3D HIS A 279 ? UNP P39075 ? ? 'expression tag' 279 4 1 3Q3D HIS A 280 ? UNP P39075 ? ? 'expression tag' 280 5 1 3Q3D HIS A 281 ? UNP P39075 ? ? 'expression tag' 281 6 1 3Q3D HIS A 282 ? UNP P39075 ? ? 'expression tag' 282 7 1 3Q3D HIS A 283 ? UNP P39075 ? ? 'expression tag' 283 8 1 3Q3D HIS A 284 ? UNP P39075 ? ? 'expression tag' 284 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14610 ? 1 MORE -94 ? 1 'SSA (A^2)' 31930 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 x,-y,-z+1/2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 72.7015000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 8 ? ASN A 16 ? ILE A 8 ASN A 16 1 ? 9 HELX_P HELX_P2 2 SER A 18 ? ILE A 28 ? SER A 18 ILE A 28 1 ? 11 HELX_P HELX_P3 3 SER A 48 ? LEU A 50 ? SER A 48 LEU A 50 5 ? 3 HELX_P HELX_P4 4 ILE A 51 ? GLY A 63 ? ILE A 51 GLY A 63 1 ? 13 HELX_P HELX_P5 5 PRO A 65 ? LEU A 75 ? PRO A 65 LEU A 75 1 ? 11 HELX_P HELX_P6 6 GLU A 76 ? GLU A 117 ? GLU A 76 GLU A 117 1 ? 42 HELX_P HELX_P7 7 ASN A 149 ? SER A 151 ? ASN A 149 SER A 151 5 ? 3 HELX_P HELX_P8 8 TYR A 152 ? GLY A 164 ? TYR A 152 GLY A 164 1 ? 13 HELX_P HELX_P9 9 SER A 181 ? MET A 185 ? SER A 181 MET A 185 5 ? 5 HELX_P HELX_P10 10 SER A 225 ? ARG A 243 ? SER A 225 ARG A 243 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 B DC 23 N3 ? ? B DG -12 B DC 12 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 B DC 23 O2 ? ? B DG -12 B DC 12 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 B DC 23 N4 ? ? B DG -12 B DC 12 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 2 N1 ? ? ? 1_555 B DT 22 N3 ? ? B DA -11 B DT 11 6_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog5 hydrog ? ? B DC 3 N3 ? ? ? 1_555 B DG 21 N1 ? ? B DC -10 B DG 10 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N4 ? ? ? 1_555 B DG 21 O6 ? ? B DC -10 B DG 10 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 O2 ? ? ? 1_555 B DG 21 N2 ? ? B DC -10 B DG 10 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 4 N3 ? ? ? 1_555 B DG 20 N1 ? ? B DC -9 B DG 9 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 4 N4 ? ? ? 1_555 B DG 20 O6 ? ? B DC -9 B DG 9 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 O2 ? ? ? 1_555 B DG 20 N2 ? ? B DC -9 B DG 9 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 5 N3 ? ? ? 1_555 B DG 19 N1 ? ? B DC -8 B DG 8 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N4 ? ? ? 1_555 B DG 19 O6 ? ? B DC -8 B DG 8 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 O2 ? ? ? 1_555 B DG 19 N2 ? ? B DC -8 B DG 8 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 6 N3 ? ? ? 1_555 B DA 18 N1 ? ? B DT -7 B DA 7 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 6 O4 ? ? ? 1_555 B DA 18 N6 ? ? B DT -7 B DA 7 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 7 N3 ? ? ? 1_555 B DG 17 N1 ? ? B DC -6 B DG 6 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 7 N4 ? ? ? 1_555 B DG 17 O6 ? ? B DC -6 B DG 6 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 7 O2 ? ? ? 1_555 B DG 17 N2 ? ? B DC -6 B DG 6 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 N3 ? ? ? 1_555 B DG 16 N1 ? ? B DC -5 B DG 5 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 8 N4 ? ? ? 1_555 B DG 16 O6 ? ? B DC -5 B DG 5 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 8 O2 ? ? ? 1_555 B DG 16 N2 ? ? B DC -5 B DG 5 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 9 N3 ? ? ? 1_555 B DG 15 N1 ? ? B DC -4 B DG 4 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 9 N4 ? ? ? 1_555 B DG 15 O6 ? ? B DC -4 B DG 4 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 9 O2 ? ? ? 1_555 B DG 15 N2 ? ? B DC -4 B DG 4 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 10 N3 ? ? ? 1_555 B DG 14 N1 ? ? B DC -3 B DG 3 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 10 N4 ? ? ? 1_555 B DG 14 O6 ? ? B DC -3 B DG 3 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 10 O2 ? ? ? 1_555 B DG 14 N2 ? ? B DC -3 B DG 3 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DT 11 N3 ? ? ? 1_555 B DA 13 N1 ? ? B DT -2 B DA 2 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DT 11 O4 ? ? ? 1_555 B DA 13 N6 ? ? B DT -2 B DA 2 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DA 13 N1 ? ? ? 1_555 B DT 11 N3 ? ? B DA 2 B DT -2 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DA 13 N6 ? ? ? 1_555 B DT 11 O4 ? ? B DA 2 B DT -2 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 14 N1 ? ? ? 1_555 B DC 10 N3 ? ? B DG 3 B DC -3 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 14 N2 ? ? ? 1_555 B DC 10 O2 ? ? B DG 3 B DC -3 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DG 14 O6 ? ? ? 1_555 B DC 10 N4 ? ? B DG 3 B DC -3 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DG 15 N1 ? ? ? 1_555 B DC 9 N3 ? ? B DG 4 B DC -4 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 15 N2 ? ? ? 1_555 B DC 9 O2 ? ? B DG 4 B DC -4 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 15 O6 ? ? ? 1_555 B DC 9 N4 ? ? B DG 4 B DC -4 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DG 16 N1 ? ? ? 1_555 B DC 8 N3 ? ? B DG 5 B DC -5 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DG 16 N2 ? ? ? 1_555 B DC 8 O2 ? ? B DG 5 B DC -5 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DG 16 O6 ? ? ? 1_555 B DC 8 N4 ? ? B DG 5 B DC -5 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DG 17 N1 ? ? ? 1_555 B DC 7 N3 ? ? B DG 6 B DC -6 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DG 17 N2 ? ? ? 1_555 B DC 7 O2 ? ? B DG 6 B DC -6 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DG 17 O6 ? ? ? 1_555 B DC 7 N4 ? ? B DG 6 B DC -6 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DA 18 N1 ? ? ? 1_555 B DT 6 N3 ? ? B DA 7 B DT -7 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DA 18 N6 ? ? ? 1_555 B DT 6 O4 ? ? B DA 7 B DT -7 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DG 19 N1 ? ? ? 1_555 B DC 5 N3 ? ? B DG 8 B DC -8 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DG 19 N2 ? ? ? 1_555 B DC 5 O2 ? ? B DG 8 B DC -8 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DG 19 O6 ? ? ? 1_555 B DC 5 N4 ? ? B DG 8 B DC -8 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DG 20 N1 ? ? ? 1_555 B DC 4 N3 ? ? B DG 9 B DC -9 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DG 20 N2 ? ? ? 1_555 B DC 4 O2 ? ? B DG 9 B DC -9 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DG 20 O6 ? ? ? 1_555 B DC 4 N4 ? ? B DG 9 B DC -9 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DG 21 N1 ? ? ? 1_555 B DC 3 N3 ? ? B DG 10 B DC -10 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DG 21 N2 ? ? ? 1_555 B DC 3 O2 ? ? B DG 10 B DC -10 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DG 21 O6 ? ? ? 1_555 B DC 3 N4 ? ? B DG 10 B DC -10 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DT 22 N3 ? ? ? 1_555 B DA 2 N1 ? ? B DT 11 B DA -11 6_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog56 hydrog ? ? B DC 23 N3 ? ? ? 1_555 B DG 1 N1 ? ? B DC 12 B DG -12 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DC 23 N4 ? ? ? 1_555 B DG 1 O6 ? ? B DC 12 B DG -12 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DC 23 O2 ? ? ? 1_555 B DG 1 N2 ? ? B DC 12 B DG -12 6_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 6 ? SER A 7 ? TYR A 6 SER A 7 A 2 ARG A 43 ? TYR A 45 ? ARG A 43 TYR A 45 A 3 TYR A 35 ? VAL A 36 ? TYR A 35 VAL A 36 B 1 VAL A 124 ? GLU A 129 ? VAL A 124 GLU A 129 B 2 GLY A 215 ? ASN A 223 ? GLY A 215 ASN A 223 B 3 TYR A 268 ? ILE A 276 ? TYR A 268 ILE A 276 B 4 VAL A 247 ? PRO A 257 ? VAL A 247 PRO A 257 B 5 TYR A 170 ? PHE A 174 ? TYR A 170 PHE A 174 B 6 HIS A 189 ? PRO A 193 ? HIS A 189 PRO A 193 B 7 ILE A 132 ? GLU A 138 ? ILE A 132 GLU A 138 B 8 MET A 207 ? ILE A 212 ? MET A 207 ILE A 212 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 6 ? N TYR A 6 O TYR A 45 ? O TYR A 45 A 2 3 O TYR A 44 ? O TYR A 44 N TYR A 35 ? N TYR A 35 B 1 2 N PHE A 125 ? N PHE A 125 O CYS A 219 ? O CYS A 219 B 2 3 N TYR A 222 ? N TYR A 222 O VAL A 270 ? O VAL A 270 B 3 4 O ARG A 269 ? O ARG A 269 N ILE A 256 ? N ILE A 256 B 4 5 O GLU A 253 ? O GLU A 253 N ALA A 172 ? N ALA A 172 B 5 6 N THR A 173 ? N THR A 173 O HIS A 189 ? O HIS A 189 B 6 7 O THR A 192 ? O THR A 192 N ILE A 135 ? N ILE A 135 B 7 8 N ILE A 134 ? N ILE A 134 O THR A 210 ? O THR A 210 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id PUY _struct_site.pdbx_auth_seq_id 6409 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE PUY A 6409' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 PRO A 144 ? PRO A 144 . ? 1_555 ? 2 AC1 10 VAL A 147 ? VAL A 147 . ? 1_555 ? 3 AC1 10 ASN A 149 ? ASN A 149 . ? 1_555 ? 4 AC1 10 TYR A 152 ? TYR A 152 . ? 1_555 ? 5 AC1 10 TYR A 170 ? TYR A 170 . ? 1_555 ? 6 AC1 10 ILE A 182 ? ILE A 182 . ? 1_555 ? 7 AC1 10 TYR A 187 ? TYR A 187 . ? 1_555 ? 8 AC1 10 GLU A 253 ? GLU A 253 . ? 1_555 ? 9 AC1 10 ILE A 255 ? ILE A 255 . ? 1_555 ? 10 AC1 10 TYR A 268 ? TYR A 268 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NZ _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 157 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 297 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.88 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" B DC -9 ? ? "C3'" B DC -9 ? ? 1.370 1.419 -0.049 0.006 N 2 1 "O3'" B DC -8 ? ? "C3'" B DC -8 ? ? 1.378 1.419 -0.041 0.006 N 3 1 "O3'" B DC -3 ? ? P B DT -2 ? ? 1.506 1.607 -0.101 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG -12 ? ? "C4'" B DG -12 ? ? "C3'" B DG -12 ? ? 101.41 104.50 -3.09 0.40 N 2 1 "C3'" B DA -11 ? ? "O3'" B DA -11 ? ? P B DC -10 ? ? 128.20 119.70 8.50 1.20 Y 3 1 "O4'" B DC -9 ? ? "C4'" B DC -9 ? ? "C3'" B DC -9 ? ? 101.83 104.50 -2.67 0.40 N 4 1 "C1'" B DC -9 ? ? "O4'" B DC -9 ? ? "C4'" B DC -9 ? ? 102.97 110.10 -7.13 1.00 N 5 1 "O4'" B DC -9 ? ? "C1'" B DC -9 ? ? N1 B DC -9 ? ? 111.46 108.30 3.16 0.30 N 6 1 "O4'" B DC -6 ? ? "C1'" B DC -6 ? ? N1 B DC -6 ? ? 114.12 108.30 5.82 0.30 N 7 1 "C3'" B DC -6 ? ? "O3'" B DC -6 ? ? P B DC -5 ? ? 130.85 119.70 11.15 1.20 Y 8 1 "O4'" B DC -5 ? ? "C1'" B DC -5 ? ? N1 B DC -5 ? ? 111.76 108.30 3.46 0.30 N 9 1 "O4'" B DC -4 ? ? "C1'" B DC -4 ? ? N1 B DC -4 ? ? 118.34 108.30 10.04 0.30 N 10 1 C4 B DC -4 ? ? C5 B DC -4 ? ? C6 B DC -4 ? ? 114.13 117.40 -3.27 0.50 N 11 1 "O4'" B DC -3 ? ? "C1'" B DC -3 ? ? N1 B DC -3 ? ? 110.78 108.30 2.48 0.30 N 12 1 "O3'" B DC -3 ? ? P B DT -2 ? ? "O5'" B DT -2 ? ? 91.10 104.00 -12.90 1.90 Y 13 1 N1 B DA 2 ? ? C6 B DA 2 ? ? N6 B DA 2 ? ? 122.50 118.60 3.90 0.60 N 14 1 "C1'" B DG 3 ? ? "O4'" B DG 3 ? ? "C4'" B DG 3 ? ? 104.09 110.10 -6.01 1.00 N 15 1 "O4'" B DG 4 ? ? "C1'" B DG 4 ? ? N9 B DG 4 ? ? 103.53 108.00 -4.47 0.70 N 16 1 "C3'" B DG 6 ? ? "C2'" B DG 6 ? ? "C1'" B DG 6 ? ? 97.38 102.40 -5.02 0.80 N 17 1 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 115.33 108.30 7.03 0.30 N 18 1 "O4'" B DA 7 ? ? "C1'" B DA 7 ? ? N9 B DA 7 ? ? 114.32 108.30 6.02 0.30 N 19 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? N9 B DG 8 ? ? 118.06 108.30 9.76 0.30 N 20 1 "O5'" B DG 10 ? ? "C5'" B DG 10 ? ? "C4'" B DG 10 ? ? 103.13 109.40 -6.27 0.80 N 21 1 C4 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 124.13 119.00 5.13 0.60 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PRO _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 178 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -67.87 _pdbx_validate_torsion.psi 64.13 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 49.8040 -11.4350 20.1930 0.3384 0.2903 0.3583 0.0773 0.0030 -0.0976 4.4668 2.8459 2.6027 2.2741 1.2407 1.2692 0.0764 0.1139 0.2801 -0.0494 -0.2060 0.1380 -0.1922 -0.1059 0.1295 'X-RAY DIFFRACTION' 2 ? refined 69.2000 7.0700 52.7330 0.4099 0.4135 0.5333 0.1416 -0.0266 -0.1586 5.3976 6.4181 47.0912 4.3651 11.4833 2.2593 -0.3275 -0.3559 0.1763 0.1909 -0.0697 -0.2124 -1.7646 0.1856 0.3972 'X-RAY DIFFRACTION' 3 ? refined 67.4380 22.9150 61.1810 0.3085 0.2069 0.4017 -0.1525 0.1084 0.0503 5.3926 2.2563 6.8677 1.1446 0.8463 0.7831 0.0955 -0.1989 -0.0834 -0.0928 -0.0532 -0.2650 0.2249 0.0899 -0.0423 'X-RAY DIFFRACTION' 4 ? refined 62.2260 17.6400 48.6350 0.7747 0.6451 1.2126 0.2049 0.3436 -0.0482 4.9569 14.3058 10.2384 6.5308 6.8479 11.1273 -0.0751 0.1785 -0.8901 1.0008 0.5120 1.2206 0.3638 0.3920 -0.4369 'X-RAY DIFFRACTION' 5 ? refined 67.5120 28.4370 59.0590 0.2148 0.2619 0.3915 -0.0325 0.0486 0.0211 2.6861 3.3235 3.1022 0.2171 1.1087 -0.9159 0.0699 -0.1008 -0.0124 -0.1773 -0.0444 -0.0997 0.1228 0.0799 -0.0256 'X-RAY DIFFRACTION' 6 ? refined 69.8060 21.7170 67.9220 0.2814 0.2768 0.4101 0.0447 0.0229 0.0182 2.4038 1.6950 4.0235 1.2727 0.3131 -0.1161 0.0802 -0.2998 -0.2991 0.1900 -0.2809 -0.2335 0.2162 0.1627 0.2006 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 2 ? ? A 96 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 97 ? ? A 117 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 118 ? ? A 156 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 157 ? ? A 169 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 170 ? ? A 205 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 206 ? ? A 277 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ASP 278 ? A ASP 278 3 1 Y 1 A HIS 279 ? A HIS 279 4 1 Y 1 A HIS 280 ? A HIS 280 5 1 Y 1 A HIS 281 ? A HIS 281 6 1 Y 1 A HIS 282 ? A HIS 282 7 1 Y 1 A HIS 283 ? A HIS 283 8 1 Y 1 A HIS 284 ? A HIS 284 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 PUY N N N N 433 PUY CA C N S 434 PUY CB C N N 435 PUY CG C Y N 436 PUY CD1 C Y N 437 PUY CD2 C Y N 438 PUY CE1 C Y N 439 PUY CE2 C Y N 440 PUY CZ C Y N 441 PUY O O N N 442 PUY OM O N N 443 PUY CMZ C N N 444 PUY C C N N 445 PUY "O5'" O N N 446 PUY "C5'" C N N 447 PUY "C4'" C N S 448 PUY "O4'" O N N 449 PUY "C1'" C N R 450 PUY N9 N Y N 451 PUY C4 C Y N 452 PUY N3 N Y N 453 PUY C2 C Y N 454 PUY N1 N Y N 455 PUY C6 C Y N 456 PUY N6 N N N 457 PUY C9 C N N 458 PUY C10 C N N 459 PUY C5 C Y N 460 PUY N7 N Y N 461 PUY C8 C Y N 462 PUY "C2'" C N R 463 PUY "O2'" O N N 464 PUY "C3'" C N S 465 PUY "N3'" N N N 466 PUY HN1 H N N 467 PUY HN2 H N N 468 PUY HA H N N 469 PUY HB1 H N N 470 PUY HB2 H N N 471 PUY HD1 H N N 472 PUY HD2 H N N 473 PUY HE1 H N N 474 PUY HE2 H N N 475 PUY HMZ1 H N N 476 PUY HMZ2 H N N 477 PUY HMZ3 H N N 478 PUY "H5'" H N N 479 PUY "H5'1" H N N 480 PUY "H5''" H N N 481 PUY "H4'" H N N 482 PUY "H1'" H N N 483 PUY H2 H N N 484 PUY H91 H N N 485 PUY H92 H N N 486 PUY H93 H N N 487 PUY H101 H N N 488 PUY H102 H N N 489 PUY H103 H N N 490 PUY H8 H N N 491 PUY "H2'" H N N 492 PUY H1 H N N 493 PUY "H3'" H N N 494 PUY H3 H N N 495 SER N N N N 496 SER CA C N S 497 SER C C N N 498 SER O O N N 499 SER CB C N N 500 SER OG O N N 501 SER OXT O N N 502 SER H H N N 503 SER H2 H N N 504 SER HA H N N 505 SER HB2 H N N 506 SER HB3 H N N 507 SER HG H N N 508 SER HXT H N N 509 THR N N N N 510 THR CA C N S 511 THR C C N N 512 THR O O N N 513 THR CB C N R 514 THR OG1 O N N 515 THR CG2 C N N 516 THR OXT O N N 517 THR H H N N 518 THR H2 H N N 519 THR HA H N N 520 THR HB H N N 521 THR HG1 H N N 522 THR HG21 H N N 523 THR HG22 H N N 524 THR HG23 H N N 525 THR HXT H N N 526 TYR N N N N 527 TYR CA C N S 528 TYR C C N N 529 TYR O O N N 530 TYR CB C N N 531 TYR CG C Y N 532 TYR CD1 C Y N 533 TYR CD2 C Y N 534 TYR CE1 C Y N 535 TYR CE2 C Y N 536 TYR CZ C Y N 537 TYR OH O N N 538 TYR OXT O N N 539 TYR H H N N 540 TYR H2 H N N 541 TYR HA H N N 542 TYR HB2 H N N 543 TYR HB3 H N N 544 TYR HD1 H N N 545 TYR HD2 H N N 546 TYR HE1 H N N 547 TYR HE2 H N N 548 TYR HH H N N 549 TYR HXT H N N 550 VAL N N N N 551 VAL CA C N S 552 VAL C C N N 553 VAL O O N N 554 VAL CB C N N 555 VAL CG1 C N N 556 VAL CG2 C N N 557 VAL OXT O N N 558 VAL H H N N 559 VAL H2 H N N 560 VAL HA H N N 561 VAL HB H N N 562 VAL HG11 H N N 563 VAL HG12 H N N 564 VAL HG13 H N N 565 VAL HG21 H N N 566 VAL HG22 H N N 567 VAL HG23 H N N 568 VAL HXT H N N 569 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 PUY N CA sing N N 426 PUY N HN1 sing N N 427 PUY N HN2 sing N N 428 PUY CA CB sing N N 429 PUY CA C sing N N 430 PUY CA HA sing N N 431 PUY CB CG sing N N 432 PUY CB HB1 sing N N 433 PUY CB HB2 sing N N 434 PUY CG CD1 doub Y N 435 PUY CG CD2 sing Y N 436 PUY CD1 CE1 sing Y N 437 PUY CD1 HD1 sing N N 438 PUY CD2 CE2 doub Y N 439 PUY CD2 HD2 sing N N 440 PUY CE1 CZ doub Y N 441 PUY CE1 HE1 sing N N 442 PUY CE2 CZ sing Y N 443 PUY CE2 HE2 sing N N 444 PUY CZ OM sing N N 445 PUY O C doub N N 446 PUY OM CMZ sing N N 447 PUY CMZ HMZ1 sing N N 448 PUY CMZ HMZ2 sing N N 449 PUY CMZ HMZ3 sing N N 450 PUY C "N3'" sing N N 451 PUY "O5'" "C5'" sing N N 452 PUY "O5'" "H5'" sing N N 453 PUY "C5'" "C4'" sing N N 454 PUY "C5'" "H5'1" sing N N 455 PUY "C5'" "H5''" sing N N 456 PUY "C4'" "O4'" sing N N 457 PUY "C4'" "C3'" sing N N 458 PUY "C4'" "H4'" sing N N 459 PUY "O4'" "C1'" sing N N 460 PUY "C1'" N9 sing N N 461 PUY "C1'" "C2'" sing N N 462 PUY "C1'" "H1'" sing N N 463 PUY N9 C4 sing Y N 464 PUY N9 C8 sing Y N 465 PUY C4 N3 doub Y N 466 PUY C4 C5 sing Y N 467 PUY N3 C2 sing Y N 468 PUY C2 N1 doub Y N 469 PUY C2 H2 sing N N 470 PUY N1 C6 sing Y N 471 PUY C6 N6 sing N N 472 PUY C6 C5 doub Y N 473 PUY N6 C9 sing N N 474 PUY N6 C10 sing N N 475 PUY C9 H91 sing N N 476 PUY C9 H92 sing N N 477 PUY C9 H93 sing N N 478 PUY C10 H101 sing N N 479 PUY C10 H102 sing N N 480 PUY C10 H103 sing N N 481 PUY C5 N7 sing Y N 482 PUY N7 C8 doub Y N 483 PUY C8 H8 sing N N 484 PUY "C2'" "O2'" sing N N 485 PUY "C2'" "C3'" sing N N 486 PUY "C2'" "H2'" sing N N 487 PUY "O2'" H1 sing N N 488 PUY "C3'" "N3'" sing N N 489 PUY "C3'" "H3'" sing N N 490 PUY "N3'" H3 sing N N 491 SER N CA sing N N 492 SER N H sing N N 493 SER N H2 sing N N 494 SER CA C sing N N 495 SER CA CB sing N N 496 SER CA HA sing N N 497 SER C O doub N N 498 SER C OXT sing N N 499 SER CB OG sing N N 500 SER CB HB2 sing N N 501 SER CB HB3 sing N N 502 SER OG HG sing N N 503 SER OXT HXT sing N N 504 THR N CA sing N N 505 THR N H sing N N 506 THR N H2 sing N N 507 THR CA C sing N N 508 THR CA CB sing N N 509 THR CA HA sing N N 510 THR C O doub N N 511 THR C OXT sing N N 512 THR CB OG1 sing N N 513 THR CB CG2 sing N N 514 THR CB HB sing N N 515 THR OG1 HG1 sing N N 516 THR CG2 HG21 sing N N 517 THR CG2 HG22 sing N N 518 THR CG2 HG23 sing N N 519 THR OXT HXT sing N N 520 TYR N CA sing N N 521 TYR N H sing N N 522 TYR N H2 sing N N 523 TYR CA C sing N N 524 TYR CA CB sing N N 525 TYR CA HA sing N N 526 TYR C O doub N N 527 TYR C OXT sing N N 528 TYR CB CG sing N N 529 TYR CB HB2 sing N N 530 TYR CB HB3 sing N N 531 TYR CG CD1 doub Y N 532 TYR CG CD2 sing Y N 533 TYR CD1 CE1 sing Y N 534 TYR CD1 HD1 sing N N 535 TYR CD2 CE2 doub Y N 536 TYR CD2 HD2 sing N N 537 TYR CE1 CZ doub Y N 538 TYR CE1 HE1 sing N N 539 TYR CE2 CZ sing Y N 540 TYR CE2 HE2 sing N N 541 TYR CZ OH sing N N 542 TYR OH HH sing N N 543 TYR OXT HXT sing N N 544 VAL N CA sing N N 545 VAL N H sing N N 546 VAL N H2 sing N N 547 VAL CA C sing N N 548 VAL CA CB sing N N 549 VAL CA HA sing N N 550 VAL C O doub N N 551 VAL C OXT sing N N 552 VAL CB CG1 sing N N 553 VAL CB CG2 sing N N 554 VAL CB HB sing N N 555 VAL CG1 HG11 sing N N 556 VAL CG1 HG12 sing N N 557 VAL CG1 HG13 sing N N 558 VAL CG2 HG21 sing N N 559 VAL CG2 HG22 sing N N 560 VAL CG2 HG23 sing N N 561 VAL OXT HXT sing N N 562 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3Q3D 'double helix' 3Q3D 'b-form double helix' 3Q3D 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 B DC 23 6_555 -0.131 -0.465 0.142 25.338 -11.561 3.266 1 B_DG-12:DC12_B B -12 ? B 12 ? 19 1 1 B DA 2 1_555 B DT 22 6_555 -2.485 -0.022 0.154 0.986 -36.631 30.616 2 B_DA-11:DT11_B B -11 ? B 11 ? ? 1 1 B DC 3 1_555 B DG 21 6_555 -1.008 -0.189 0.018 6.020 -13.454 1.166 3 B_DC-10:DG10_B B -10 ? B 10 ? 19 1 1 B DC 4 1_555 B DG 20 6_555 -0.155 0.038 0.414 2.707 -25.511 4.869 4 B_DC-9:DG9_B B -9 ? B 9 ? 19 1 1 B DC 5 1_555 B DG 19 6_555 -0.228 -0.266 1.229 -19.624 -12.867 -8.761 5 B_DC-8:DG8_B B -8 ? B 8 ? 19 1 1 B DT 6 1_555 B DA 18 6_555 -0.675 -0.255 -0.185 -8.566 -13.045 -12.739 6 B_DT-7:DA7_B B -7 ? B 7 ? 20 1 1 B DC 7 1_555 B DG 17 6_555 0.038 -0.342 -0.852 8.786 -21.248 -1.749 7 B_DC-6:DG6_B B -6 ? B 6 ? 19 1 1 B DC 8 1_555 B DG 16 6_555 -0.344 -0.095 0.067 -12.398 -16.861 -4.582 8 B_DC-5:DG5_B B -5 ? B 5 ? 19 1 1 B DC 9 1_555 B DG 15 6_555 -0.212 0.036 0.041 -9.277 -11.843 -6.639 9 B_DC-4:DG4_B B -4 ? B 4 ? 19 1 1 B DC 10 1_555 B DG 14 6_555 0.252 -0.208 -0.146 -0.287 4.202 0.401 10 B_DC-3:DG3_B B -3 ? B 3 ? 19 1 1 B DT 11 1_555 B DA 13 6_555 -0.651 -0.271 -0.293 18.250 16.754 -5.115 11 B_DT-2:DA2_B B -2 ? B 2 ? 20 1 1 B DG 1 1_555 B DC 23 1_555 -0.131 -0.465 0.142 25.338 -11.561 3.266 12 B_DG-12:DC12_B B -12 ? B 12 ? 19 1 1 B DA 2 1_555 B DT 22 1_555 -2.485 -0.022 0.154 0.986 -36.631 30.616 13 B_DA-11:DT11_B B -11 ? B 11 ? ? 1 1 B DC 3 1_555 B DG 21 1_555 -1.008 -0.189 0.018 6.020 -13.454 1.166 14 B_DC-10:DG10_B B -10 ? B 10 ? 19 1 1 B DC 4 1_555 B DG 20 1_555 -0.155 0.038 0.414 2.707 -25.511 4.869 15 B_DC-9:DG9_B B -9 ? B 9 ? 19 1 1 B DC 5 1_555 B DG 19 1_555 -0.228 -0.266 1.229 -19.624 -12.867 -8.761 16 B_DC-8:DG8_B B -8 ? B 8 ? 19 1 1 B DT 6 1_555 B DA 18 1_555 -0.675 -0.255 -0.185 -8.566 -13.045 -12.739 17 B_DT-7:DA7_B B -7 ? B 7 ? 20 1 1 B DC 7 1_555 B DG 17 1_555 0.038 -0.342 -0.852 8.786 -21.248 -1.749 18 B_DC-6:DG6_B B -6 ? B 6 ? 19 1 1 B DC 8 1_555 B DG 16 1_555 -0.344 -0.095 0.067 -12.399 -16.861 -4.582 19 B_DC-5:DG5_B B -5 ? B 5 ? 19 1 1 B DC 9 1_555 B DG 15 1_555 -0.212 0.036 0.041 -9.277 -11.843 -6.639 20 B_DC-4:DG4_B B -4 ? B 4 ? 19 1 1 B DC 10 1_555 B DG 14 1_555 0.252 -0.208 -0.146 -0.287 4.202 0.401 21 B_DC-3:DG3_B B -3 ? B 3 ? 19 1 1 B DT 11 1_555 B DA 13 1_555 -0.651 -0.271 -0.293 18.250 16.754 -5.115 22 B_DT-2:DA2_B B -2 ? B 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 B DC 23 6_555 B DA 2 1_555 B DT 22 6_555 1.165 -0.456 3.930 7.508 10.261 24.403 -4.064 -0.182 3.644 22.432 -16.413 27.472 1 BB_DG-12DA-11:DT11DC12_BB B -12 ? B 12 ? B -11 ? B 11 ? 1 B DA 2 1_555 B DT 22 6_555 B DC 3 1_555 B DG 21 6_555 -0.305 0.161 3.332 -9.084 -4.210 46.219 0.553 -0.379 3.306 -5.290 11.415 47.233 2 BB_DA-11DC-10:DG10DT11_BB B -11 ? B 11 ? B -10 ? B 10 ? 1 B DC 3 1_555 B DG 21 6_555 B DC 4 1_555 B DG 20 6_555 0.308 -0.253 3.527 -7.516 5.005 37.638 -1.038 -1.450 3.347 7.624 11.449 38.668 3 BB_DC-10DC-9:DG9DG10_BB B -10 ? B 10 ? B -9 ? B 9 ? 1 B DC 4 1_555 B DG 20 6_555 B DC 5 1_555 B DG 19 6_555 -1.299 -1.004 3.507 -11.791 1.643 35.029 -1.835 0.249 3.690 2.638 18.927 36.936 4 BB_DC-9DC-8:DG8DG9_BB B -9 ? B 9 ? B -8 ? B 8 ? 1 B DC 5 1_555 B DG 19 6_555 B DT 6 1_555 B DA 18 6_555 -1.009 -0.662 3.216 6.665 3.232 28.856 -1.923 3.273 2.828 6.354 -13.104 29.772 5 BB_DC-8DT-7:DA7DG8_BB B -8 ? B 8 ? B -7 ? B 7 ? 1 B DT 6 1_555 B DA 18 6_555 B DC 7 1_555 B DG 17 6_555 1.000 0.023 2.835 7.201 -0.800 37.421 0.126 -0.715 2.969 -1.233 -11.096 38.092 6 BB_DT-7DC-6:DG6DA7_BB B -7 ? B 7 ? B -6 ? B 6 ? 1 B DC 7 1_555 B DG 17 6_555 B DC 8 1_555 B DG 16 6_555 -0.702 -0.260 3.906 -8.377 4.743 29.344 -1.615 -0.669 3.867 9.061 16.003 30.850 7 BB_DC-6DC-5:DG5DG6_BB B -6 ? B 6 ? B -5 ? B 5 ? 1 B DC 8 1_555 B DG 16 6_555 B DC 9 1_555 B DG 15 6_555 0.286 -0.979 3.161 5.661 6.844 32.896 -2.703 0.364 2.913 11.819 -9.776 34.042 8 BB_DC-5DC-4:DG4DG5_BB B -5 ? B 5 ? B -4 ? B 4 ? 1 B DC 9 1_555 B DG 15 6_555 B DC 10 1_555 B DG 14 6_555 1.448 -0.680 3.198 2.406 -0.227 40.576 -0.954 -1.821 3.279 -0.326 -3.466 40.645 9 BB_DC-4DC-3:DG3DG4_BB B -4 ? B 4 ? B -3 ? B 3 ? 1 B DC 10 1_555 B DG 14 6_555 B DT 11 1_555 B DA 13 6_555 -1.229 -0.741 2.958 3.796 8.378 12.929 -7.612 6.687 1.732 32.376 -14.670 15.855 10 BB_DC-3DT-2:DA2DG3_BB B -3 ? B 3 ? B -2 ? B 2 ? 1 B DG 1 1_555 B DC 23 1_555 B DA 2 1_555 B DT 22 1_555 1.165 -0.456 3.930 7.508 10.261 24.403 -4.064 -0.182 3.644 22.432 -16.413 27.472 11 BB_DG-12DA-11:DT11DC12_BB B -12 ? B 12 ? B -11 ? B 11 ? 1 B DA 2 1_555 B DT 22 1_555 B DC 3 1_555 B DG 21 1_555 -0.305 0.161 3.332 -9.084 -4.210 46.219 0.553 -0.379 3.306 -5.290 11.415 47.233 12 BB_DA-11DC-10:DG10DT11_BB B -11 ? B 11 ? B -10 ? B 10 ? 1 B DC 3 1_555 B DG 21 1_555 B DC 4 1_555 B DG 20 1_555 0.308 -0.253 3.527 -7.516 5.005 37.638 -1.038 -1.450 3.347 7.624 11.449 38.668 13 BB_DC-10DC-9:DG9DG10_BB B -10 ? B 10 ? B -9 ? B 9 ? 1 B DC 4 1_555 B DG 20 1_555 B DC 5 1_555 B DG 19 1_555 -1.299 -1.004 3.507 -11.791 1.643 35.029 -1.835 0.249 3.690 2.638 18.927 36.936 14 BB_DC-9DC-8:DG8DG9_BB B -9 ? B 9 ? B -8 ? B 8 ? 1 B DC 5 1_555 B DG 19 1_555 B DT 6 1_555 B DA 18 1_555 -1.009 -0.662 3.216 6.665 3.232 28.856 -1.923 3.273 2.828 6.354 -13.104 29.772 15 BB_DC-8DT-7:DA7DG8_BB B -8 ? B 8 ? B -7 ? B 7 ? 1 B DT 6 1_555 B DA 18 1_555 B DC 7 1_555 B DG 17 1_555 1.000 0.023 2.835 7.201 -0.800 37.421 0.126 -0.715 2.969 -1.233 -11.096 38.092 16 BB_DT-7DC-6:DG6DA7_BB B -7 ? B 7 ? B -6 ? B 6 ? 1 B DC 7 1_555 B DG 17 1_555 B DC 8 1_555 B DG 16 1_555 -0.702 -0.260 3.906 -8.377 4.743 29.344 -1.615 -0.669 3.867 9.061 16.004 30.850 17 BB_DC-6DC-5:DG5DG6_BB B -6 ? B 6 ? B -5 ? B 5 ? 1 B DC 8 1_555 B DG 16 1_555 B DC 9 1_555 B DG 15 1_555 0.286 -0.979 3.161 5.661 6.844 32.896 -2.703 0.364 2.913 11.819 -9.776 34.042 18 BB_DC-5DC-4:DG4DG5_BB B -5 ? B 5 ? B -4 ? B 4 ? 1 B DC 9 1_555 B DG 15 1_555 B DC 10 1_555 B DG 14 1_555 1.448 -0.680 3.198 2.406 -0.227 40.576 -0.954 -1.821 3.279 -0.326 -3.466 40.645 19 BB_DC-4DC-3:DG3DG4_BB B -4 ? B 4 ? B -3 ? B 3 ? 1 B DC 10 1_555 B DG 14 1_555 B DT 11 1_555 B DA 13 1_555 -1.229 -0.741 2.958 3.796 8.378 12.929 -7.612 6.687 1.732 32.376 -14.670 15.855 20 BB_DC-3DT-2:DA2DG3_BB B -3 ? B 3 ? B -2 ? B 2 ? # _atom_sites.entry_id 3Q3D _atom_sites.fract_transf_matrix[1][1] 0.009391 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009391 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006877 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_