HEADER TRANSCRIPTION/DNA 29-DEC-10 3Q5S TITLE CRYSTAL STRUCTURE OF BMRR BOUND TO ACETYLCHOLINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 23 BP PROMOTER DNA; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: BMRR, BMR1R, BSU24020; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 OTHER_DETAILS: 23 BP PROMOTER OF BMR EFFLUX GENE SYNTHESIZED BY IDT KEYWDS MULTIDRUG BINDING, MULTIDRUG RESISTANCE, TRANSCRIPTION REGULATOR, KEYWDS 2 TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.BACHAS,C.EGINTON,G.GUNIO,H.WADE REVDAT 4 21-FEB-24 3Q5S 1 REMARK SEQADV REVDAT 3 08-NOV-17 3Q5S 1 REMARK REVDAT 2 20-JUL-11 3Q5S 1 JRNL REVDAT 1 15-JUN-11 3Q5S 0 JRNL AUTH S.BACHAS,C.EGINTON,D.GUNIO,H.WADE JRNL TITL STRUCTURAL CONTRIBUTIONS TO MULTIDRUG RECOGNITION IN THE JRNL TITL 2 MULTIDRUG RESISTANCE (MDR) GENE REGULATOR, BMRR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 11046 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 21690368 JRNL DOI 10.1073/PNAS.1104850108 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 13749 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 710 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 REFLECTION IN BIN (WORKING SET) : 503 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 47.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.3720 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.4860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2229 REMARK 3 NUCLEIC ACID ATOMS : 468 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : -0.15000 REMARK 3 B33 (A**2) : 0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.713 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.398 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.334 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 41.830 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.882 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2816 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3910 ; 1.479 ; 2.191 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 274 ; 5.299 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;31.883 ;24.259 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 400 ;17.181 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.817 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 438 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1965 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1378 ; 3.723 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2238 ; 6.200 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1438 ; 6.536 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1672 ; 9.999 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): 53.8980 -7.5140 26.7820 REMARK 3 T TENSOR REMARK 3 T11: 0.1172 T22: 0.1139 REMARK 3 T33: 0.1503 T12: 0.0031 REMARK 3 T13: -0.0267 T23: -0.0384 REMARK 3 L TENSOR REMARK 3 L11: 0.2811 L22: 0.2899 REMARK 3 L33: 0.5468 L12: 0.1395 REMARK 3 L13: 0.1712 L23: 0.3764 REMARK 3 S TENSOR REMARK 3 S11: 0.0209 S12: 0.0425 S13: 0.0797 REMARK 3 S21: -0.0067 S22: -0.0354 S23: -0.0278 REMARK 3 S31: -0.0655 S32: -0.0996 S33: 0.0144 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 119 A 164 REMARK 3 ORIGIN FOR THE GROUP (A): 66.7100 22.7730 57.8980 REMARK 3 T TENSOR REMARK 3 T11: 0.0961 T22: 0.0750 REMARK 3 T33: 0.1271 T12: -0.0591 REMARK 3 T13: 0.0359 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 2.5588 L22: 1.2813 REMARK 3 L33: 4.1109 L12: -1.1070 REMARK 3 L13: 0.9579 L23: 0.8426 REMARK 3 S TENSOR REMARK 3 S11: 0.0635 S12: 0.1382 S13: 0.0360 REMARK 3 S21: -0.1026 S22: -0.1115 S23: -0.0817 REMARK 3 S31: -0.0416 S32: -0.0344 S33: 0.0479 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 165 A 277 REMARK 3 ORIGIN FOR THE GROUP (A): 69.0350 23.1300 64.1160 REMARK 3 T TENSOR REMARK 3 T11: 0.0833 T22: 0.0936 REMARK 3 T33: 0.1258 T12: 0.0343 REMARK 3 T13: 0.0052 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.7311 L22: 0.7946 REMARK 3 L33: 0.7373 L12: 0.7081 REMARK 3 L13: -0.1236 L23: 0.0278 REMARK 3 S TENSOR REMARK 3 S11: 0.0763 S12: -0.0162 S13: -0.0825 REMARK 3 S21: 0.0310 S22: -0.0866 S23: -0.0285 REMARK 3 S31: 0.0297 S32: -0.0499 S33: 0.0102 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -12 B 1 REMARK 3 ORIGIN FOR THE GROUP (A): 34.6130 -16.2190 33.0800 REMARK 3 T TENSOR REMARK 3 T11: 0.1044 T22: 0.2925 REMARK 3 T33: 0.1713 T12: -0.0112 REMARK 3 T13: -0.0344 T23: -0.1210 REMARK 3 L TENSOR REMARK 3 L11: 1.7263 L22: 1.2938 REMARK 3 L33: 1.1720 L12: 0.8735 REMARK 3 L13: -0.0894 L23: 0.9063 REMARK 3 S TENSOR REMARK 3 S11: 0.1665 S12: -0.1685 S13: 0.0275 REMARK 3 S21: 0.3323 S22: -0.2720 S23: -0.0062 REMARK 3 S31: 0.2384 S32: -0.3226 S33: 0.1056 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 12 REMARK 3 ORIGIN FOR THE GROUP (A): 33.6440 18.3810 40.2730 REMARK 3 T TENSOR REMARK 3 T11: 0.0778 T22: 0.3789 REMARK 3 T33: 0.1000 T12: 0.0491 REMARK 3 T13: 0.0079 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 0.6875 L22: 1.1547 REMARK 3 L33: 1.7578 L12: -0.4921 REMARK 3 L13: 0.8147 L23: 0.1062 REMARK 3 S TENSOR REMARK 3 S11: 0.0718 S12: 0.2029 S13: 0.0767 REMARK 3 S21: -0.2756 S22: -0.2031 S23: -0.0426 REMARK 3 S31: -0.1218 S32: -0.0580 S33: 0.1313 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3Q5S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000063229. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 45.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 17.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M SODIUM MALONATE PH 7.0 0.05% REMARK 280 JEFFAMINE M600, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.78550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 109.17825 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.39275 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 72.78550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 36.39275 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 109.17825 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 72.78550 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 ASP A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 HIS A 282 REMARK 465 HIS A 283 REMARK 465 HIS A 284 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 3 N REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 LYS A 20 CG CD CE NZ REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 GLU A 76 CG CD OE1 OE2 REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 GLU A 79 CG CD OE1 OE2 REMARK 470 LYS A 110 CG CD CE NZ REMARK 470 LYS A 154 CG CD CE NZ REMARK 470 LYS A 263 CG CD CE NZ REMARK 470 LYS A 264 CG CD CE NZ REMARK 470 LEU A 277 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 188 OD2 ASP A 250 1.81 REMARK 500 NH1 ARG A 188 OD1 ASP A 250 2.10 REMARK 500 OE2 GLU A 138 NE2 HIS A 189 2.17 REMARK 500 NH1 ARG A 188 CG ASP A 250 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 138 OE2 GLU A 138 8665 1.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC B -8 O3' DC B -8 C3' -0.047 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC B -5 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC B -4 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DC B -3 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT B -2 N3 - C4 - O4 ANGL. DEV. = 3.7 DEGREES REMARK 500 DA B 2 C3' - C2' - C1' ANGL. DEV. = -6.2 DEGREES REMARK 500 DA B 2 O4' - C1' - N9 ANGL. DEV. = 3.3 DEGREES REMARK 500 DG B 5 C3' - C2' - C1' ANGL. DEV. = -5.6 DEGREES REMARK 500 DG B 5 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DG B 6 O4' - C1' - N9 ANGL. DEV. = 5.9 DEGREES REMARK 500 DA B 7 C3' - C2' - C1' ANGL. DEV. = -7.2 DEGREES REMARK 500 DA B 7 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG B 8 C3' - C2' - C1' ANGL. DEV. = -5.9 DEGREES REMARK 500 DG B 9 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT B 11 O4' - C1' - N1 ANGL. DEV. = 4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 41 15.97 54.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACH A 1289 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 3968 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3D6Y RELATED DB: PDB REMARK 900 RELATED ID: 3D6Z RELATED DB: PDB REMARK 900 RELATED ID: 3Q1M RELATED DB: PDB REMARK 900 RELATED ID: 3Q2Y RELATED DB: PDB REMARK 900 RELATED ID: 3Q5P RELATED DB: PDB REMARK 900 RELATED ID: 3Q5R RELATED DB: PDB DBREF 3Q5S A 1 278 UNP P39075 BMRR_BACSU 1 278 DBREF 3Q5S B -12 12 PDB 3Q5S 3Q5S -12 12 SEQADV 3Q5S LEU A 142 UNP P39075 ILE 142 CONFLICT SEQADV 3Q5S LEU A 277 UNP P39075 ALA 277 CONFLICT SEQADV 3Q5S ASP A 278 UNP P39075 GLU 278 CONFLICT SEQADV 3Q5S HIS A 279 UNP P39075 EXPRESSION TAG SEQADV 3Q5S HIS A 280 UNP P39075 EXPRESSION TAG SEQADV 3Q5S HIS A 281 UNP P39075 EXPRESSION TAG SEQADV 3Q5S HIS A 282 UNP P39075 EXPRESSION TAG SEQADV 3Q5S HIS A 283 UNP P39075 EXPRESSION TAG SEQADV 3Q5S HIS A 284 UNP P39075 EXPRESSION TAG SEQRES 1 A 284 MET LYS GLU SER TYR TYR SER ILE GLY GLU VAL SER LYS SEQRES 2 A 284 LEU ALA ASN VAL SER ILE LYS ALA LEU ARG TYR TYR ASP SEQRES 3 A 284 LYS ILE ASP LEU PHE LYS PRO ALA TYR VAL ASP PRO ASP SEQRES 4 A 284 THR SER TYR ARG TYR TYR THR ASP SER GLN LEU ILE HIS SEQRES 5 A 284 LEU ASP LEU ILE LYS SER LEU LYS TYR ILE GLY THR PRO SEQRES 6 A 284 LEU GLU GLU MET LYS LYS ALA GLN ASP LEU GLU MET GLU SEQRES 7 A 284 GLU LEU PHE ALA PHE TYR THR GLU GLN GLU ARG GLN ILE SEQRES 8 A 284 ARG GLU LYS LEU ASP PHE LEU SER ALA LEU GLU GLN THR SEQRES 9 A 284 ILE SER LEU VAL LYS LYS ARG MET LYS ARG GLN MET GLU SEQRES 10 A 284 TYR PRO ALA LEU GLY GLU VAL PHE VAL LEU ASP GLU GLU SEQRES 11 A 284 GLU ILE ARG ILE ILE GLN THR GLU ALA GLU GLY LEU GLY SEQRES 12 A 284 PRO GLU ASN VAL LEU ASN ALA SER TYR SER LYS LEU LYS SEQRES 13 A 284 LYS PHE ILE GLU SER ALA ASP GLY PHE THR ASN ASN SER SEQRES 14 A 284 TYR GLY ALA THR PHE SER PHE GLN PRO TYR THR SER ILE SEQRES 15 A 284 ASP GLU MET THR TYR ARG HIS ILE PHE THR PRO VAL LEU SEQRES 16 A 284 THR ASN LYS GLN ILE SER SER ILE THR PRO ASP MET GLU SEQRES 17 A 284 ILE THR THR ILE PRO LYS GLY ARG TYR ALA CYS ILE ALA SEQRES 18 A 284 TYR ASN PHE SER PRO GLU HIS TYR PHE LEU ASN LEU GLN SEQRES 19 A 284 LYS LEU ILE LYS TYR ILE ALA ASP ARG GLN LEU THR VAL SEQRES 20 A 284 VAL SER ASP VAL TYR GLU LEU ILE ILE PRO ILE HIS TYR SEQRES 21 A 284 SER PRO LYS LYS GLN GLU GLU TYR ARG VAL GLU MET LYS SEQRES 22 A 284 ILE ARG ILE LEU ASP HIS HIS HIS HIS HIS HIS SEQRES 1 B 23 DG DA DC DC DC DT DC DC DC DC DT DT DA SEQRES 2 B 23 DG DG DG DG DA DG DG DG DT DC HET ACH A1289 10 HET GOL A3968 6 HETNAM ACH ACETYLCHOLINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ACH C7 H16 N O2 1+ FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *9(H2 O) HELIX 1 1 ILE A 8 ASN A 16 1 9 HELIX 2 2 SER A 18 ILE A 28 1 11 HELIX 3 3 LEU A 50 GLY A 63 1 14 HELIX 4 4 PRO A 65 GLN A 73 1 9 HELIX 5 5 GLU A 76 GLU A 117 1 42 HELIX 6 6 ASN A 149 SER A 151 5 3 HELIX 7 7 TYR A 152 GLY A 164 1 13 HELIX 8 8 SER A 181 MET A 185 5 5 HELIX 9 9 SER A 225 GLN A 244 1 20 SHEET 1 A 3 TYR A 5 SER A 7 0 SHEET 2 A 3 ARG A 43 THR A 46 -1 O TYR A 45 N TYR A 6 SHEET 3 A 3 TYR A 35 VAL A 36 -1 N TYR A 35 O TYR A 44 SHEET 1 B 8 VAL A 124 GLU A 129 0 SHEET 2 B 8 GLY A 215 ASN A 223 -1 O CYS A 219 N PHE A 125 SHEET 3 B 8 TYR A 268 ILE A 276 -1 O ILE A 276 N ARG A 216 SHEET 4 B 8 VAL A 251 PRO A 257 -1 N ILE A 256 O ARG A 269 SHEET 5 B 8 TYR A 170 PHE A 174 -1 N PHE A 174 O VAL A 251 SHEET 6 B 8 TYR A 187 PRO A 193 -1 O ARG A 188 N THR A 173 SHEET 7 B 8 ILE A 132 LEU A 142 -1 N LEU A 142 O TYR A 187 SHEET 8 B 8 GLU A 208 ILE A 212 -1 O GLU A 208 N GLN A 136 SITE 1 AC1 5 ASN A 149 TYR A 187 ILE A 255 HOH A 286 SITE 2 AC1 5 HOH A 288 SITE 1 AC2 1 TYR A 35 CRYST1 106.407 106.407 145.571 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009398 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009398 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006870 0.00000