data_3Q5T # _entry.id 3Q5T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.292 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3Q5T RCSB RCSB063230 WWPDB D_1000063230 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3Q5Y _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3Q5T _pdbx_database_status.recvd_initial_deposition_date 2010-12-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chen, Q.' 1 'Zhang, H.' 2 'Wang, J.-H.' 3 # _citation.id primary _citation.title ;A conserved hydrophobic patch on V beta domains revealed by TCR beta chain crystal structures: Implications for pre-TCR dimerization. ; _citation.journal_abbrev 'Front Immunol' _citation.journal_volume 2 _citation.page_first 5 _citation.page_last 5 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country CH _citation.journal_id_ISSN 1664-3224 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22566796 _citation.pdbx_database_id_DOI 10.3389/fimmu.2011.00005 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zhou, B.' 1 primary 'Chen, Q.' 2 primary 'Mallis, R.J.' 3 primary 'Zhang, H.' 4 primary 'Liu, J.H.' 5 primary 'Reinherz, E.L.' 6 primary 'Wang, J.H.' 7 # _cell.entry_id 3Q5T _cell.length_a 53.290 _cell.length_b 69.829 _cell.length_c 126.953 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3Q5T _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TCR N30 beta' 26981.932 1 ? ? ? ? 2 water nat water 18.015 33 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEAGVTQSPRYAVLQEGQSVSFWCDPISGHDTLYWYQQPRDQGPQLLVYFRDEAVIDNSQLPSDRFSAVRPKGTNSTLKI QSAKQGDTATYLCASSSGVGTEVFFGKGTRLTVVEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWW VNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRAD S ; _entity_poly.pdbx_seq_one_letter_code_can ;MEAGVTQSPRYAVLQEGQSVSFWCDPISGHDTLYWYQQPRDQGPQLLVYFRDEAVIDNSQLPSDRFSAVRPKGTNSTLKI QSAKQGDTATYLCASSSGVGTEVFFGKGTRLTVVEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWW VNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRAD S ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ALA n 1 4 GLY n 1 5 VAL n 1 6 THR n 1 7 GLN n 1 8 SER n 1 9 PRO n 1 10 ARG n 1 11 TYR n 1 12 ALA n 1 13 VAL n 1 14 LEU n 1 15 GLN n 1 16 GLU n 1 17 GLY n 1 18 GLN n 1 19 SER n 1 20 VAL n 1 21 SER n 1 22 PHE n 1 23 TRP n 1 24 CYS n 1 25 ASP n 1 26 PRO n 1 27 ILE n 1 28 SER n 1 29 GLY n 1 30 HIS n 1 31 ASP n 1 32 THR n 1 33 LEU n 1 34 TYR n 1 35 TRP n 1 36 TYR n 1 37 GLN n 1 38 GLN n 1 39 PRO n 1 40 ARG n 1 41 ASP n 1 42 GLN n 1 43 GLY n 1 44 PRO n 1 45 GLN n 1 46 LEU n 1 47 LEU n 1 48 VAL n 1 49 TYR n 1 50 PHE n 1 51 ARG n 1 52 ASP n 1 53 GLU n 1 54 ALA n 1 55 VAL n 1 56 ILE n 1 57 ASP n 1 58 ASN n 1 59 SER n 1 60 GLN n 1 61 LEU n 1 62 PRO n 1 63 SER n 1 64 ASP n 1 65 ARG n 1 66 PHE n 1 67 SER n 1 68 ALA n 1 69 VAL n 1 70 ARG n 1 71 PRO n 1 72 LYS n 1 73 GLY n 1 74 THR n 1 75 ASN n 1 76 SER n 1 77 THR n 1 78 LEU n 1 79 LYS n 1 80 ILE n 1 81 GLN n 1 82 SER n 1 83 ALA n 1 84 LYS n 1 85 GLN n 1 86 GLY n 1 87 ASP n 1 88 THR n 1 89 ALA n 1 90 THR n 1 91 TYR n 1 92 LEU n 1 93 CYS n 1 94 ALA n 1 95 SER n 1 96 SER n 1 97 SER n 1 98 GLY n 1 99 VAL n 1 100 GLY n 1 101 THR n 1 102 GLU n 1 103 VAL n 1 104 PHE n 1 105 PHE n 1 106 GLY n 1 107 LYS n 1 108 GLY n 1 109 THR n 1 110 ARG n 1 111 LEU n 1 112 THR n 1 113 VAL n 1 114 VAL n 1 115 GLU n 1 116 ASP n 1 117 LEU n 1 118 ARG n 1 119 ASN n 1 120 VAL n 1 121 THR n 1 122 PRO n 1 123 PRO n 1 124 LYS n 1 125 VAL n 1 126 SER n 1 127 LEU n 1 128 PHE n 1 129 GLU n 1 130 PRO n 1 131 SER n 1 132 LYS n 1 133 ALA n 1 134 GLU n 1 135 ILE n 1 136 ALA n 1 137 ASN n 1 138 LYS n 1 139 GLN n 1 140 LYS n 1 141 ALA n 1 142 THR n 1 143 LEU n 1 144 VAL n 1 145 CYS n 1 146 LEU n 1 147 ALA n 1 148 ARG n 1 149 GLY n 1 150 PHE n 1 151 PHE n 1 152 PRO n 1 153 ASP n 1 154 HIS n 1 155 VAL n 1 156 GLU n 1 157 LEU n 1 158 SER n 1 159 TRP n 1 160 TRP n 1 161 VAL n 1 162 ASN n 1 163 GLY n 1 164 LYS n 1 165 GLU n 1 166 VAL n 1 167 HIS n 1 168 SER n 1 169 GLY n 1 170 VAL n 1 171 SER n 1 172 THR n 1 173 ASP n 1 174 PRO n 1 175 GLN n 1 176 ALA n 1 177 TYR n 1 178 LYS n 1 179 GLU n 1 180 SER n 1 181 ASN n 1 182 TYR n 1 183 SER n 1 184 TYR n 1 185 SER n 1 186 LEU n 1 187 SER n 1 188 SER n 1 189 ARG n 1 190 LEU n 1 191 ARG n 1 192 VAL n 1 193 SER n 1 194 ALA n 1 195 THR n 1 196 PHE n 1 197 TRP n 1 198 HIS n 1 199 ASN n 1 200 PRO n 1 201 ARG n 1 202 ASN n 1 203 HIS n 1 204 PHE n 1 205 ARG n 1 206 CYS n 1 207 GLN n 1 208 VAL n 1 209 GLN n 1 210 PHE n 1 211 HIS n 1 212 GLY n 1 213 LEU n 1 214 SER n 1 215 GLU n 1 216 GLU n 1 217 ASP n 1 218 LYS n 1 219 TRP n 1 220 PRO n 1 221 GLU n 1 222 GLY n 1 223 SER n 1 224 PRO n 1 225 LYS n 1 226 PRO n 1 227 VAL n 1 228 THR n 1 229 GLN n 1 230 ASN n 1 231 ILE n 1 232 SER n 1 233 ALA n 1 234 GLU n 1 235 ALA n 1 236 TRP n 1 237 GLY n 1 238 ARG n 1 239 ALA n 1 240 ASP n 1 241 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3Q5T _struct_ref.pdbx_db_accession 3Q5T _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3Q5T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 241 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3Q5T _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 241 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 241 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3Q5T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.80 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20 % PEG 4000, 100 mM Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3Q5T _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.0 _reflns.number_obs 16199 _reflns.number_all 16208 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.06 _reflns.pdbx_netI_over_sigmaI 19.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3Q5T _refine.ls_number_reflns_obs 16199 _refine.ls_number_reflns_all 16247 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.047 _refine.ls_d_res_high 2.005 _refine.ls_percent_reflns_obs 99.70 _refine.ls_R_factor_obs 0.2375 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2351 _refine.ls_R_factor_R_free 0.2898 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.02 _refine.ls_number_reflns_R_free 813 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -11.5227 _refine.aniso_B[2][2] 23.6850 _refine.aniso_B[3][3] -12.1623 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.344 _refine.solvent_model_param_bsol 48.651 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.35 _refine.pdbx_overall_phase_error 32.92 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1881 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 33 _refine_hist.number_atoms_total 1914 _refine_hist.d_res_high 2.005 _refine_hist.d_res_low 19.047 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 1938 'X-RAY DIFFRACTION' ? f_angle_d 1.097 ? ? 2632 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 24.856 ? ? 1174 'X-RAY DIFFRACTION' ? f_chiral_restr 0.072 ? ? 277 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 347 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.0049 2.1303 2484 0.3327 99.00 0.4179 . . 152 . . . . 'X-RAY DIFFRACTION' . 2.1303 2.2946 2547 0.2934 100.00 0.3373 . . 116 . . . . 'X-RAY DIFFRACTION' . 2.2946 2.5250 2514 0.2831 100.00 0.3348 . . 162 . . . . 'X-RAY DIFFRACTION' . 2.5250 2.8893 2548 0.2680 100.00 0.3706 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.8893 3.6361 2610 0.2414 100.00 0.3403 . . 119 . . . . 'X-RAY DIFFRACTION' . 3.6361 19.0483 2683 0.1980 99.00 0.2083 . . 127 . . . . # _struct.entry_id 3Q5T _struct.title 'V beta/V beta homodimerization-based pre-TCR model suggested by TCR beta crystal structures' _struct.pdbx_descriptor 'TCR N30 beta' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3Q5T _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'IG, T cell receptor, antigen peptide/MHC, membrane, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 84 ? THR A 88 ? LYS A 84 THR A 88 5 ? 5 HELX_P HELX_P2 2 ASP A 116 ? VAL A 120 ? ASP A 116 VAL A 120 5 ? 5 HELX_P HELX_P3 3 SER A 131 ? GLN A 139 ? SER A 131 GLN A 139 1 ? 9 HELX_P HELX_P4 4 ALA A 194 ? HIS A 198 ? ALA A 194 HIS A 198 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 93 SG ? ? A CYS 24 A CYS 93 1_555 ? ? ? ? ? ? ? 2.027 ? disulf2 disulf ? ? A CYS 145 SG ? ? ? 1_555 A CYS 206 SG ? ? A CYS 145 A CYS 206 1_555 ? ? ? ? ? ? ? 2.028 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 8 A . ? SER 8 A PRO 9 A ? PRO 9 A 1 -2.35 2 PHE 151 A . ? PHE 151 A PRO 152 A ? PRO 152 A 1 -4.65 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 6 ? SER A 8 ? THR A 6 SER A 8 A 2 VAL A 20 ? ASP A 25 ? VAL A 20 ASP A 25 A 3 SER A 76 ? ILE A 80 ? SER A 76 ILE A 80 A 4 PHE A 66 ? VAL A 69 ? PHE A 66 VAL A 69 B 1 TYR A 11 ? GLN A 15 ? TYR A 11 GLN A 15 B 2 THR A 109 ? VAL A 114 ? THR A 109 VAL A 114 B 3 ALA A 89 ? SER A 96 ? ALA A 89 SER A 96 B 4 THR A 32 ? GLN A 38 ? THR A 32 GLN A 38 B 5 GLN A 45 ? ARG A 51 ? GLN A 45 ARG A 51 B 6 ALA A 54 ? ASP A 57 ? ALA A 54 ASP A 57 C 1 TYR A 11 ? GLN A 15 ? TYR A 11 GLN A 15 C 2 THR A 109 ? VAL A 114 ? THR A 109 VAL A 114 C 3 ALA A 89 ? SER A 96 ? ALA A 89 SER A 96 C 4 PHE A 104 ? PHE A 105 ? PHE A 104 PHE A 105 D 1 LYS A 124 ? PHE A 128 ? LYS A 124 PHE A 128 D 2 LYS A 140 ? PHE A 150 ? LYS A 140 PHE A 150 D 3 SER A 183 ? SER A 193 ? SER A 183 SER A 193 D 4 VAL A 170 ? THR A 172 ? VAL A 170 THR A 172 E 1 LYS A 124 ? PHE A 128 ? LYS A 124 PHE A 128 E 2 LYS A 140 ? PHE A 150 ? LYS A 140 PHE A 150 E 3 SER A 183 ? SER A 193 ? SER A 183 SER A 193 E 4 TYR A 177 ? SER A 180 ? TYR A 177 SER A 180 F 1 LYS A 164 ? VAL A 166 ? LYS A 164 VAL A 166 F 2 VAL A 155 ? VAL A 161 ? VAL A 155 VAL A 161 F 3 HIS A 203 ? PHE A 210 ? HIS A 203 PHE A 210 F 4 GLN A 229 ? TRP A 236 ? GLN A 229 TRP A 236 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 8 ? N SER A 8 O TRP A 23 ? O TRP A 23 A 2 3 N PHE A 22 ? N PHE A 22 O LEU A 78 ? O LEU A 78 A 3 4 O LYS A 79 ? O LYS A 79 N SER A 67 ? N SER A 67 B 1 2 N LEU A 14 ? N LEU A 14 O VAL A 114 ? O VAL A 114 B 2 3 O THR A 109 ? O THR A 109 N TYR A 91 ? N TYR A 91 B 3 4 O THR A 90 ? O THR A 90 N GLN A 38 ? N GLN A 38 B 4 5 N GLN A 37 ? N GLN A 37 O GLN A 45 ? O GLN A 45 B 5 6 N TYR A 49 ? N TYR A 49 O ILE A 56 ? O ILE A 56 C 1 2 N LEU A 14 ? N LEU A 14 O VAL A 114 ? O VAL A 114 C 2 3 O THR A 109 ? O THR A 109 N TYR A 91 ? N TYR A 91 C 3 4 N SER A 95 ? N SER A 95 O PHE A 104 ? O PHE A 104 D 1 2 N PHE A 128 ? N PHE A 128 O VAL A 144 ? O VAL A 144 D 2 3 N ALA A 141 ? N ALA A 141 O VAL A 192 ? O VAL A 192 D 3 4 O ARG A 189 ? O ARG A 189 N SER A 171 ? N SER A 171 E 1 2 N PHE A 128 ? N PHE A 128 O VAL A 144 ? O VAL A 144 E 2 3 N ALA A 141 ? N ALA A 141 O VAL A 192 ? O VAL A 192 E 3 4 O SER A 185 ? O SER A 185 N TYR A 177 ? N TYR A 177 F 1 2 O LYS A 164 ? O LYS A 164 N VAL A 161 ? N VAL A 161 F 2 3 N GLU A 156 ? N GLU A 156 O GLN A 209 ? O GLN A 209 F 3 4 N VAL A 208 ? N VAL A 208 O ILE A 231 ? O ILE A 231 # _database_PDB_matrix.entry_id 3Q5T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3Q5T _atom_sites.fract_transf_matrix[1][1] 0.018765 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014321 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007877 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 TRP 23 23 23 TRP TRP A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 HIS 30 30 30 HIS HIS A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 TRP 35 35 35 TRP TRP A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 CYS 93 93 93 CYS CYS A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 CYS 145 145 145 CYS CYS A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 PHE 150 150 150 PHE PHE A . n A 1 151 PHE 151 151 151 PHE PHE A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 HIS 154 154 154 HIS HIS A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 TRP 159 159 159 TRP TRP A . n A 1 160 TRP 160 160 160 TRP TRP A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 HIS 167 167 167 HIS HIS A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 ASP 173 173 173 ASP ASP A . n A 1 174 PRO 174 174 174 PRO PRO A . n A 1 175 GLN 175 175 175 GLN GLN A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 TYR 177 177 177 TYR TYR A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 TYR 182 182 182 TYR TYR A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 TYR 184 184 184 TYR TYR A . n A 1 185 SER 185 185 185 SER SER A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 ARG 189 189 189 ARG ARG A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 ARG 191 191 191 ARG ARG A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 ALA 194 194 194 ALA ALA A . n A 1 195 THR 195 195 195 THR THR A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 TRP 197 197 197 TRP TRP A . n A 1 198 HIS 198 198 198 HIS HIS A . n A 1 199 ASN 199 199 199 ASN ASN A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 ARG 201 201 201 ARG ARG A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 PHE 204 204 204 PHE PHE A . n A 1 205 ARG 205 205 205 ARG ARG A . n A 1 206 CYS 206 206 206 CYS CYS A . n A 1 207 GLN 207 207 207 GLN GLN A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 GLN 209 209 209 GLN GLN A . n A 1 210 PHE 210 210 210 PHE PHE A . n A 1 211 HIS 211 211 211 HIS HIS A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 GLU 215 215 215 GLU GLU A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 ASP 217 217 217 ASP ASP A . n A 1 218 LYS 218 218 218 LYS LYS A . n A 1 219 TRP 219 219 219 TRP TRP A . n A 1 220 PRO 220 220 220 PRO PRO A . n A 1 221 GLU 221 221 221 GLU GLU A . n A 1 222 GLY 222 222 222 GLY GLY A . n A 1 223 SER 223 223 223 SER SER A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 LYS 225 225 225 LYS LYS A . n A 1 226 PRO 226 226 226 PRO PRO A . n A 1 227 VAL 227 227 227 VAL VAL A . n A 1 228 THR 228 228 228 THR THR A . n A 1 229 GLN 229 229 229 GLN GLN A . n A 1 230 ASN 230 230 230 ASN ASN A . n A 1 231 ILE 231 231 231 ILE ILE A . n A 1 232 SER 232 232 232 SER SER A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 GLU 234 234 234 GLU GLU A . n A 1 235 ALA 235 235 235 ALA ALA A . n A 1 236 TRP 236 236 236 TRP TRP A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 ALA 239 239 239 ALA ALA A . n A 1 240 ASP 240 240 240 ASP ASP A . n A 1 241 SER 241 241 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 242 1 HOH HOH A . B 2 HOH 2 243 2 HOH HOH A . B 2 HOH 3 244 3 HOH HOH A . B 2 HOH 4 245 4 HOH HOH A . B 2 HOH 5 246 5 HOH HOH A . B 2 HOH 6 247 6 HOH HOH A . B 2 HOH 7 248 7 HOH HOH A . B 2 HOH 8 249 8 HOH HOH A . B 2 HOH 9 250 9 HOH HOH A . B 2 HOH 10 251 10 HOH HOH A . B 2 HOH 11 252 11 HOH HOH A . B 2 HOH 12 253 12 HOH HOH A . B 2 HOH 13 254 13 HOH HOH A . B 2 HOH 14 255 14 HOH HOH A . B 2 HOH 15 256 15 HOH HOH A . B 2 HOH 16 257 16 HOH HOH A . B 2 HOH 17 258 17 HOH HOH A . B 2 HOH 18 259 18 HOH HOH A . B 2 HOH 19 260 19 HOH HOH A . B 2 HOH 20 261 20 HOH HOH A . B 2 HOH 21 262 21 HOH HOH A . B 2 HOH 22 263 22 HOH HOH A . B 2 HOH 23 264 23 HOH HOH A . B 2 HOH 24 265 24 HOH HOH A . B 2 HOH 25 266 25 HOH HOH A . B 2 HOH 26 267 26 HOH HOH A . B 2 HOH 27 268 27 HOH HOH A . B 2 HOH 28 269 28 HOH HOH A . B 2 HOH 29 270 29 HOH HOH A . B 2 HOH 30 271 30 HOH HOH A . B 2 HOH 31 272 31 HOH HOH A . B 2 HOH 32 273 32 HOH HOH A . B 2 HOH 33 274 33 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 69.8290000000 0.0000000000 0.0000000000 -1.0000000000 126.9530000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 270 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-10-15 4 'Structure model' 1 3 2018-04-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.journal_id_CSD' 3 4 'Structure model' '_citation.journal_volume' 4 4 'Structure model' '_citation.page_first' 5 4 'Structure model' '_citation.page_last' 6 4 'Structure model' '_citation.pdbx_database_id_PubMed' 7 4 'Structure model' '_citation.title' 8 4 'Structure model' '_citation_author.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -6.6153 23.6388 80.3759 0.2430 0.3699 0.3483 0.0181 0.0859 0.0558 0.1633 0.5468 1.9172 1.3088 -1.0523 -1.2720 0.3617 -0.2376 0.2331 0.0968 -0.0516 0.1858 -0.1777 0.2010 -0.1865 'X-RAY DIFFRACTION' 2 ? refined -14.0417 14.6700 85.7898 0.2862 0.4622 0.2856 -0.0945 -0.0071 0.0440 2.1742 3.0317 6.9533 -0.5472 -3.2111 3.2879 0.6164 0.5943 -0.1594 -0.0790 -0.4558 0.0668 -0.0033 -1.4925 -0.0723 'X-RAY DIFFRACTION' 3 ? refined -10.3934 18.2620 85.7745 0.1463 0.3698 0.2604 -0.0238 0.0612 0.0837 1.6055 2.1273 4.6393 0.7670 -3.7496 -1.1441 0.6141 -0.2207 0.0328 0.1436 0.0174 0.3707 -0.1193 -0.0597 -0.4042 'X-RAY DIFFRACTION' 4 ? refined 4.5730 21.6122 56.3593 0.3787 0.2623 0.3047 0.1035 0.0373 -0.1602 2.3465 1.2268 1.9229 0.8431 -1.3852 -1.3840 -0.0837 0.1740 -0.1785 -0.3671 0.0115 -0.0754 0.5874 0.2986 0.1554 'X-RAY DIFFRACTION' 5 ? refined 3.8475 26.2217 59.9382 0.3088 0.1733 0.2449 0.0075 0.0160 0.0145 1.1480 0.7561 4.1860 -0.7817 -0.0300 -2.0170 -0.2457 -0.0370 -0.1391 -0.2095 0.1063 0.1162 0.4767 0.2398 0.1153 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'resid 3:35' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'resid 36:58' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'resid 59:109' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'resid 110:147' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? 'resid 148:240' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 51 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 51 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 51 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 108.66 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -11.64 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 28 ? ? -35.91 -36.54 2 1 ASP A 52 ? ? 52.20 -92.92 3 1 SER A 59 ? ? -49.78 -11.27 4 1 ARG A 70 ? ? -159.53 55.07 5 1 THR A 74 ? ? -111.80 -93.19 6 1 ALA A 89 ? ? 177.23 173.03 7 1 GLU A 102 ? ? 26.28 110.11 8 1 PHE A 151 ? ? -170.84 133.56 9 1 PRO A 152 ? ? -82.93 -156.59 10 1 ASP A 153 ? ? -75.57 36.29 11 1 HIS A 154 ? ? -107.01 67.39 12 1 GLU A 221 ? ? 74.55 -164.37 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 51 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.124 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A SER 241 ? A SER 241 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #