HEADER HYDROLASE 29-DEC-10 3Q5V TITLE THE STRUCTURE OF INORGANIC PYROPHOSPHATASE FROM THERMOCOCCUS TITLE 2 THIOREDUCENS IN COMPLEX WITH MAGNESIUM AND SULFATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TT-IPPASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS THIOREDUCENS; SOURCE 3 ORGANISM_TAXID: 277988; SOURCE 4 STRAIN: OGL-20; SOURCE 5 GENE: TT-IPPASE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) ROSETTA2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS INORGANIC PYROPHOSPHATASE, HYDROLASE, MAGNESIUM EXPDTA X-RAY DIFFRACTION AUTHOR R.C.HUGHES,L.COATES,E.J.MEEHAN,J.D.NG REVDAT 2 13-SEP-23 3Q5V 1 REMARK LINK REVDAT 1 04-JAN-12 3Q5V 0 JRNL AUTH R.C.HUGHES,L.COATES,E.J.MEEHAN,J.D.NG JRNL TITL THE STRUCTURE OF INORGANIC PYROPHOSPHATASE FROM THERMOCOCCUS JRNL TITL 2 THIOREDUCENS IN COMPLEX WITH MAGNESIUM AND SULFATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.1 REMARK 3 NUMBER OF REFLECTIONS : 82573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.122 REMARK 3 R VALUE (WORKING SET) : 0.120 REMARK 3 FREE R VALUE : 0.155 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 4158 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0588 - 2.7791 0.99 9123 466 0.1358 0.1645 REMARK 3 2 2.7791 - 2.2058 1.00 8933 497 0.1268 0.1575 REMARK 3 3 2.2058 - 1.9270 1.00 8911 476 0.1200 0.1544 REMARK 3 4 1.9270 - 1.7508 1.00 8873 454 0.1054 0.1444 REMARK 3 5 1.7508 - 1.6253 0.99 8844 480 0.0933 0.1322 REMARK 3 6 1.6253 - 1.5295 0.99 8733 442 0.0849 0.1205 REMARK 3 7 1.5295 - 1.4529 0.95 8416 456 0.0911 0.1478 REMARK 3 8 1.4529 - 1.3896 0.86 7616 404 0.1158 0.1615 REMARK 3 9 1.3896 - 1.3361 0.66 5816 322 0.1395 0.1909 REMARK 3 10 1.3361 - 1.2900 0.36 3150 161 0.1954 0.2505 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.38 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 58.24 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.62150 REMARK 3 B22 (A**2) : -3.62150 REMARK 3 B33 (A**2) : -5.96510 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3594 REMARK 3 ANGLE : 1.351 4931 REMARK 3 CHIRALITY : 0.089 490 REMARK 3 PLANARITY : 0.010 666 REMARK 3 DIHEDRAL : 15.452 1442 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3Q5V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063232. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85157 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.260 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.6 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 14.6 REMARK 200 DATA REDUNDANCY IN SHELL : 1.40 REMARK 200 R MERGE FOR SHELL (I) : 0.25600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1UDE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, BICINE, NACL, MAGNESIUM SULFATE, REMARK 280 PEG MME 550, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 57.24500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.05042 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 49.53333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 57.24500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 33.05042 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 49.53333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 57.24500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 33.05042 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 49.53333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 57.24500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 33.05042 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 49.53333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 57.24500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 33.05042 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 49.53333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 57.24500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 33.05042 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 49.53333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 66.10083 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 99.06667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 66.10083 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 99.06667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 66.10083 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 99.06667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 66.10083 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 99.06667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 66.10083 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 99.06667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 66.10083 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 99.06667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -407.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 263 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 267 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 305 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 413 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 525 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 536 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 256 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 257 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 323 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 474 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 582 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 177 REMARK 465 GLU B 178 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 32 O HOH B 636 1.91 REMARK 500 OE2 GLU B 32 O HOH B 636 2.03 REMARK 500 CE1 PHE B 51 O HOH B 358 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 12 56.22 -150.24 REMARK 500 GLU B 12 59.73 -152.90 REMARK 500 GLU B 12 65.34 -152.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 672 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 22 OE1 REMARK 620 2 HOH A 207 O 146.8 REMARK 620 3 HOH A 313 O 86.0 72.6 REMARK 620 4 HOH A 404 O 119.4 90.0 100.7 REMARK 620 5 HOH A 441 O 74.9 93.8 120.0 138.3 REMARK 620 6 HOH A 671 O 133.2 72.8 140.7 61.3 80.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 598 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 66 OD1 REMARK 620 2 ASP A 71 OD2 172.8 REMARK 620 3 ASP A 103 OD1 85.4 100.8 REMARK 620 4 HOH A 221 O 87.4 85.7 165.7 REMARK 620 5 HOH A 228 O 91.7 85.2 85.2 82.7 REMARK 620 6 HOH A 269 O 92.2 90.6 98.1 94.5 175.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 98 OD1 REMARK 620 2 ASP A 103 OD2 94.5 REMARK 620 3 HOH A 230 O 131.9 77.9 REMARK 620 4 HOH A 389 O 117.8 64.2 101.6 REMARK 620 5 HOH A 416 O 94.4 163.9 86.1 122.4 REMARK 620 6 SO4 A 646 O3 75.9 118.9 148.8 68.2 76.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 599 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 66 OD2 REMARK 620 2 ASP B 71 OD1 176.8 REMARK 620 3 ASP B 103 OD1 83.4 94.6 REMARK 620 4 HOH B 203 O 86.8 95.7 163.8 REMARK 620 5 HOH B 224 O 95.1 87.2 83.3 84.6 REMARK 620 6 HOH B 251 O 89.8 88.1 100.2 92.7 174.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 604 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 98 OD1 REMARK 620 2 ASP B 103 OD2 101.8 REMARK 620 3 HOH B 216 O 157.1 85.1 REMARK 620 4 HOH B 248 O 115.1 75.1 87.8 REMARK 620 5 HOH B 359 O 67.9 73.4 93.8 148.2 REMARK 620 6 HOH B 464 O 83.8 130.5 108.5 58.8 147.4 REMARK 620 7 SO4 B 602 O3 89.9 163.6 79.8 110.4 101.1 61.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 600 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 100 O REMARK 620 2 HOH B 282 O 95.8 REMARK 620 3 HOH B 313 O 86.0 172.3 REMARK 620 4 HOH B 315 O 78.8 92.7 95.0 REMARK 620 5 HOH B 633 O 98.4 87.0 85.3 177.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 666 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 248 O REMARK 620 2 HOH B 280 O 67.8 REMARK 620 3 HOH B 464 O 82.3 103.1 REMARK 620 4 HOH B 662 O 72.0 136.2 87.7 REMARK 620 5 HOH B 667 O 113.2 80.3 164.0 100.7 REMARK 620 6 HOH B 667 O 119.1 111.7 144.0 73.9 32.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 598 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 645 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 646 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 599 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 672 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 666 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3Q3L RELATED DB: PDB REMARK 900 RELATED ID: 3I98 RELATED DB: PDB REMARK 900 RELATED ID: 3Q4W RELATED DB: PDB REMARK 900 RELATED ID: 3Q46 RELATED DB: PDB REMARK 900 RELATED ID: 3Q9M RELATED DB: PDB DBREF 3Q5V A 1 178 PDB 3Q5V 3Q5V 1 178 DBREF 3Q5V B 1 178 PDB 3Q5V 3Q5V 1 178 SEQRES 1 A 178 MET ASN PRO PHE HIS GLU LEU GLU PRO GLY PRO GLU VAL SEQRES 2 A 178 PRO GLU VAL VAL TYR ALA LEU ILE GLU ILE PRO LYS GLY SEQRES 3 A 178 SER ARG ASN LYS TYR GLU LEU ASP LYS LYS THR GLY LEU SEQRES 4 A 178 LEU LYS LEU ASP ARG VAL LEU TYR SER PRO PHE PHE TYR SEQRES 5 A 178 PRO VAL ASP TYR GLY ILE ILE PRO GLN THR TRP TYR ASP SEQRES 6 A 178 ASP GLY ASP PRO PHE ASP ILE MET VAL ILE MET ARG GLU SEQRES 7 A 178 PRO VAL TYR PRO LEU THR ILE ILE GLU ALA ARG PRO ILE SEQRES 8 A 178 GLY ILE MET LYS MET GLU ASP SER GLY ASP LYS ASP TRP SEQRES 9 A 178 LYS VAL LEU ALA VAL PRO VAL GLU ASP PRO TYR PHE ASN SEQRES 10 A 178 ASP TRP LYS ASP ILE SER ASP VAL PRO LYS ALA PHE LEU SEQRES 11 A 178 ASP GLU ILE ALA HIS PHE PHE GLN ARG TYR LYS GLU LEU SEQRES 12 A 178 GLN GLY LYS THR THR LYS ILE GLU GLY TRP GLY ASN ALA SEQRES 13 A 178 GLU GLU ALA LYS ARG GLU ILE LEU ARG ALA ILE GLU MET SEQRES 14 A 178 TYR LYS GLU LYS PHE GLY LYS GLU GLU SEQRES 1 B 178 MET ASN PRO PHE HIS GLU LEU GLU PRO GLY PRO GLU VAL SEQRES 2 B 178 PRO GLU VAL VAL TYR ALA LEU ILE GLU ILE PRO LYS GLY SEQRES 3 B 178 SER ARG ASN LYS TYR GLU LEU ASP LYS LYS THR GLY LEU SEQRES 4 B 178 LEU LYS LEU ASP ARG VAL LEU TYR SER PRO PHE PHE TYR SEQRES 5 B 178 PRO VAL ASP TYR GLY ILE ILE PRO GLN THR TRP TYR ASP SEQRES 6 B 178 ASP GLY ASP PRO PHE ASP ILE MET VAL ILE MET ARG GLU SEQRES 7 B 178 PRO VAL TYR PRO LEU THR ILE ILE GLU ALA ARG PRO ILE SEQRES 8 B 178 GLY ILE MET LYS MET GLU ASP SER GLY ASP LYS ASP TRP SEQRES 9 B 178 LYS VAL LEU ALA VAL PRO VAL GLU ASP PRO TYR PHE ASN SEQRES 10 B 178 ASP TRP LYS ASP ILE SER ASP VAL PRO LYS ALA PHE LEU SEQRES 11 B 178 ASP GLU ILE ALA HIS PHE PHE GLN ARG TYR LYS GLU LEU SEQRES 12 B 178 GLN GLY LYS THR THR LYS ILE GLU GLY TRP GLY ASN ALA SEQRES 13 B 178 GLU GLU ALA LYS ARG GLU ILE LEU ARG ALA ILE GLU MET SEQRES 14 B 178 TYR LYS GLU LYS PHE GLY LYS GLU GLU HET MG A 598 1 HET MG A 603 1 HET SO4 A 645 5 HET SO4 A 646 5 HET MG A 672 1 HET MG B 599 1 HET SO4 B 602 5 HET MG B 600 1 HET MG B 604 1 HET MG B 666 1 HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION FORMUL 3 MG 7(MG 2+) FORMUL 5 SO4 3(O4 S 2-) FORMUL 13 HOH *614(H2 O) HELIX 1 1 ASN A 2 LEU A 7 1 6 HELIX 2 2 ASP A 113 ASN A 117 5 5 HELIX 3 3 ASP A 121 VAL A 125 5 5 HELIX 4 4 PRO A 126 TYR A 140 1 15 HELIX 5 5 LYS A 141 GLY A 145 5 5 HELIX 6 6 ASN A 155 GLY A 175 1 21 HELIX 7 7 ASN B 2 LEU B 7 1 6 HELIX 8 8 ASP B 113 ASN B 117 5 5 HELIX 9 9 ASP B 121 VAL B 125 5 5 HELIX 10 10 PRO B 126 TYR B 140 1 15 HELIX 11 11 LYS B 141 GLY B 145 5 5 HELIX 12 12 ALA B 156 PHE B 174 1 19 SHEET 1 A 7 THR A 148 GLY A 154 0 SHEET 2 A 7 ILE A 85 ASP A 98 -1 N LYS A 95 O GLY A 152 SHEET 3 A 7 LYS A 105 PRO A 110 -1 O LYS A 105 N MET A 94 SHEET 4 A 7 ASP A 71 VAL A 74 1 N MET A 73 O VAL A 106 SHEET 5 A 7 ASP A 55 ILE A 58 -1 N ASP A 55 O VAL A 74 SHEET 6 A 7 VAL A 17 ILE A 23 -1 N LEU A 20 O ILE A 58 SHEET 7 A 7 ILE A 85 ASP A 98 -1 O ALA A 88 N VAL A 17 SHEET 1 B 2 ASN A 29 LEU A 33 0 SHEET 2 B 2 LEU A 40 VAL A 45 -1 O ARG A 44 N LYS A 30 SHEET 1 C 8 ASP B 101 LYS B 102 0 SHEET 2 C 8 THR B 148 ASN B 155 0 SHEET 3 C 8 VAL B 17 ILE B 23 0 SHEET 4 C 8 ASP B 55 ILE B 58 -1 O ILE B 58 N LEU B 20 SHEET 5 C 8 ASP B 71 VAL B 74 -1 O VAL B 74 N ASP B 55 SHEET 6 C 8 LYS B 105 PRO B 110 1 O VAL B 106 N MET B 73 SHEET 7 C 8 ILE B 85 ASP B 98 -1 N ILE B 91 O LEU B 107 SHEET 8 C 8 THR B 148 ASN B 155 -1 O GLY B 152 N LYS B 95 SHEET 1 D 2 ASN B 29 LEU B 33 0 SHEET 2 D 2 LEU B 40 VAL B 45 -1 O ARG B 44 N LYS B 30 LINK OE1 GLU A 22 MG MG A 672 1555 1555 2.48 LINK OD1 ASP A 66 MG MG A 598 1555 1555 2.08 LINK OD2BASP A 71 MG MG A 598 1555 1555 2.01 LINK OD1 ASP A 98 MG MG A 603 1555 1555 2.37 LINK OD1 ASP A 103 MG MG A 598 1555 1555 2.06 LINK OD2 ASP A 103 MG MG A 603 1555 1555 2.18 LINK O HOH A 207 MG MG A 672 1555 1555 2.90 LINK O HOH A 221 MG MG A 598 1555 1555 2.10 LINK O HOH A 228 MG MG A 598 1555 1555 2.10 LINK O HOH A 230 MG MG A 603 1555 1555 2.16 LINK O HOH A 269 MG MG A 598 1555 1555 2.07 LINK O HOH A 313 MG MG A 672 1555 1555 2.39 LINK O BHOH A 389 MG MG A 603 1555 1555 2.47 LINK O HOH A 404 MG MG A 672 1555 1555 2.90 LINK O HOH A 416 MG MG A 603 1555 1555 2.51 LINK O HOH A 441 MG MG A 672 1555 1555 2.42 LINK MG MG A 603 O3 SO4 A 646 1555 1555 2.59 LINK O HOH A 671 MG MG A 672 1555 1555 2.25 LINK OD2 ASP B 66 MG MG B 599 1555 1555 2.04 LINK OD1AASP B 71 MG MG B 599 1555 1555 1.94 LINK OD1 ASP B 98 MG MG B 604 1555 1555 2.26 LINK O GLY B 100 MG MG B 600 1555 1555 2.04 LINK OD1 ASP B 103 MG MG B 599 1555 1555 2.06 LINK OD2 ASP B 103 MG MG B 604 1555 1555 2.16 LINK O HOH B 203 MG MG B 599 1555 1555 2.07 LINK O HOH B 216 MG MG B 604 1555 1555 2.06 LINK O HOH B 224 MG MG B 599 1555 1555 2.09 LINK O HOH B 248 MG MG B 604 1555 1555 2.74 LINK O HOH B 248 MG MG B 666 1555 1555 2.04 LINK O HOH B 251 MG MG B 599 1555 1555 2.13 LINK O HOH B 280 MG MG B 666 1555 1555 2.02 LINK O HOH B 282 MG MG B 600 1555 1555 2.31 LINK O HOH B 313 MG MG B 600 1555 1555 2.52 LINK O HOH B 315 MG MG B 600 1555 1555 2.46 LINK O HOH B 359 MG MG B 604 1555 1555 2.28 LINK O HOH B 464 MG MG B 604 1555 1555 2.71 LINK O HOH B 464 MG MG B 666 1555 1555 2.03 LINK MG MG B 600 O HOH B 633 1555 1555 2.28 LINK O3 SO4 B 602 MG MG B 604 1555 1555 2.22 LINK O HOH B 662 MG MG B 666 1555 1555 1.98 LINK MG MG B 666 O BHOH B 667 1555 1555 2.27 LINK MG MG B 666 O AHOH B 667 1555 1555 2.86 CISPEP 1 VAL A 13 PRO A 14 0 -1.19 CISPEP 2 VAL A 13 PRO A 14 0 -3.33 CISPEP 3 VAL B 13 PRO B 14 0 10.36 CISPEP 4 VAL B 13 PRO B 14 0 6.41 SITE 1 AC1 6 ASP A 66 ASP A 71 ASP A 103 HOH A 221 SITE 2 AC1 6 HOH A 228 HOH A 269 SITE 1 AC2 6 ASP A 98 ASP A 103 HOH A 230 HOH A 389 SITE 2 AC2 6 HOH A 416 SO4 A 646 SITE 1 AC3 7 ARG A 44 LYS A 141 LYS A 146 HOH A 318 SITE 2 AC3 7 HOH A 416 HOH A 497 SO4 A 646 SITE 1 AC4 11 LYS A 30 ARG A 44 ASP A 98 TYR A 140 SITE 2 AC4 11 LYS A 141 HOH A 207 HOH A 389 HOH A 497 SITE 3 AC4 11 HOH A 499 MG A 603 SO4 A 645 SITE 1 AC5 6 ASP B 66 ASP B 71 ASP B 103 HOH B 203 SITE 2 AC5 6 HOH B 224 HOH B 251 SITE 1 AC6 6 GLU A 22 HOH A 207 HOH A 313 HOH A 404 SITE 2 AC6 6 HOH A 441 HOH A 671 SITE 1 AC7 12 LYS B 30 ARG B 44 ASP B 98 TYR B 140 SITE 2 AC7 12 LYS B 141 HOH B 216 HOH B 262 HOH B 301 SITE 3 AC7 12 HOH B 314 HOH B 464 HOH B 466 MG B 604 SITE 1 AC8 6 HOH A 254 GLY B 100 HOH B 282 HOH B 313 SITE 2 AC8 6 HOH B 315 HOH B 633 SITE 1 AC9 7 ASP B 98 ASP B 103 HOH B 216 HOH B 248 SITE 2 AC9 7 HOH B 359 HOH B 464 SO4 B 602 SITE 1 BC1 5 HOH B 248 HOH B 280 HOH B 464 HOH B 662 SITE 2 BC1 5 HOH B 667 CRYST1 114.490 114.490 148.600 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008734 0.005043 0.000000 0.00000 SCALE2 0.000000 0.010086 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006729 0.00000