HEADER PROTEIN BINDING, DE NOVO PROTEIN 10-JAN-11 3Q9U TITLE IN SILICO AND IN VITRO CO-EVOLUTION OF A HIGH AFFINITY COMPLEMENTARY TITLE 2 PROTEIN-PROTEIN INTERFACE COMPND MOL_ID: 1; COMPND 2 MOLECULE: COA BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CONSENSUS ANKYRIN REPEAT; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 8 ORGANISM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, ISRAEL STRUCTURAL PROTEOMICS CENTER, ISPC, PRB- KEYWDS 2 BINDING DESIGNED ANKYRIN REPEAT, PROTEIN BINDING, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.KARANICOLAS,J.E.CORN,I.CHEN,L.A.JOACHIMIAK,O.DYM,S.CHUNG,S.ALBECK, AUTHOR 2 T.UNGER,W.HU,G.LIU,S.DELBECQ,G.T.MONTELIONE,C.SPIEGEL,D.LIU,D.BAKER, AUTHOR 3 ISRAEL STRUCTURAL PROTEOMICS CENTER (ISPC) REVDAT 3 13-SEP-23 3Q9U 1 REMARK REVDAT 2 20-JUL-11 3Q9U 1 JRNL REVDAT 1 20-APR-11 3Q9U 0 JRNL AUTH J.KARANICOLAS,J.E.CORN,I.CHEN,L.A.JOACHIMIAK,O.DYM,S.H.PECK, JRNL AUTH 2 S.ALBECK,T.UNGER,W.HU,G.LIU,S.DELBECQ,G.T.MONTELIONE, JRNL AUTH 3 C.P.SPIEGEL,D.R.LIU,D.BAKER JRNL TITL A DE NOVO PROTEIN BINDING PAIR BY COMPUTATIONAL DESIGN AND JRNL TITL 2 DIRECTED EVOLUTION. JRNL REF MOL.CELL V. 42 250 2011 JRNL REFN ISSN 1097-2765 JRNL PMID 21458342 JRNL DOI 10.1016/J.MOLCEL.2011.03.010 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.2 REMARK 3 NUMBER OF REFLECTIONS : 24632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1263 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.7431 - 4.7816 0.83 2478 135 0.1969 0.2228 REMARK 3 2 4.7816 - 3.7964 0.81 2435 124 0.1942 0.2753 REMARK 3 3 3.7964 - 3.3169 0.80 2433 127 0.2541 0.2888 REMARK 3 4 3.3169 - 3.0137 0.87 2583 159 0.2708 0.3863 REMARK 3 5 3.0137 - 2.7978 0.90 2738 143 0.2704 0.3853 REMARK 3 6 2.7978 - 2.6329 0.92 2749 161 0.2570 0.3657 REMARK 3 7 2.6329 - 2.5011 0.92 2796 146 0.2539 0.3311 REMARK 3 8 2.5011 - 2.3922 0.90 2724 127 0.2509 0.3613 REMARK 3 9 2.3922 - 2.3001 0.80 2433 141 0.2631 0.3646 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 43.42 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.33310 REMARK 3 B22 (A**2) : 1.03320 REMARK 3 B33 (A**2) : -0.70010 REMARK 3 B12 (A**2) : -0.43770 REMARK 3 B13 (A**2) : 0.62830 REMARK 3 B23 (A**2) : 0.30770 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4697 REMARK 3 ANGLE : 1.327 6397 REMARK 3 CHIRALITY : 0.085 732 REMARK 3 PLANARITY : 0.010 822 REMARK 3 DIHEDRAL : 21.192 1764 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -2.6175 7.4590 -17.9631 REMARK 3 T TENSOR REMARK 3 T11: 0.0535 T22: 0.0951 REMARK 3 T33: 0.0966 T12: -0.0109 REMARK 3 T13: 0.0034 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.4431 L22: 1.2653 REMARK 3 L33: 1.1925 L12: -0.2190 REMARK 3 L13: 0.0546 L23: -0.3348 REMARK 3 S TENSOR REMARK 3 S11: -0.0629 S12: -0.0897 S13: 0.0204 REMARK 3 S21: -0.0852 S22: 0.0085 S23: 0.0548 REMARK 3 S31: 0.0031 S32: 0.0226 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 36.1137 -7.0748 9.1888 REMARK 3 T TENSOR REMARK 3 T11: 0.0875 T22: 0.0840 REMARK 3 T33: 0.0696 T12: 0.0191 REMARK 3 T13: 0.0479 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.6686 L22: 2.6491 REMARK 3 L33: 1.2839 L12: -0.6414 REMARK 3 L13: 0.4844 L23: -0.4742 REMARK 3 S TENSOR REMARK 3 S11: 0.1268 S12: 0.0692 S13: 0.1627 REMARK 3 S21: -0.3035 S22: -0.2756 S23: -0.1482 REMARK 3 S31: 0.1024 S32: 0.0821 S33: -0.0006 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 20.8628 10.5514 -24.8081 REMARK 3 T TENSOR REMARK 3 T11: 0.0817 T22: 0.1392 REMARK 3 T33: 0.1877 T12: 0.0189 REMARK 3 T13: 0.0033 T23: 0.0506 REMARK 3 L TENSOR REMARK 3 L11: 1.5211 L22: 0.9130 REMARK 3 L33: 1.4316 L12: -0.6291 REMARK 3 L13: -0.7048 L23: 0.7071 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: 0.1960 S13: 0.2628 REMARK 3 S21: 0.0929 S22: 0.1048 S23: -0.1549 REMARK 3 S31: -0.0193 S32: -0.2856 S33: -0.0002 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 17.4882 -22.0451 15.4056 REMARK 3 T TENSOR REMARK 3 T11: 0.2122 T22: 0.1412 REMARK 3 T33: 0.1248 T12: -0.0234 REMARK 3 T13: -0.0172 T23: -0.0325 REMARK 3 L TENSOR REMARK 3 L11: 0.7721 L22: 0.9938 REMARK 3 L33: 1.2940 L12: -0.0148 REMARK 3 L13: 0.2409 L23: -0.3492 REMARK 3 S TENSOR REMARK 3 S11: 0.2003 S12: -0.0186 S13: 0.0135 REMARK 3 S21: -0.0960 S22: -0.1641 S23: 0.1340 REMARK 3 S31: 0.0503 S32: -0.1988 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3Q9U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063375. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8729 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27228 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3Q9N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NAF 20 % PEG 3350, PH 7, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 118 REMARK 465 GLY A 119 REMARK 465 ALA A 120 REMARK 465 ARG B 115 REMARK 465 GLN B 116 REMARK 465 ALA B 117 REMARK 465 LYS B 118 REMARK 465 GLU B 140 REMARK 465 ALA C -3 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LEU C 114 CD2 REMARK 480 LYS C 122 CD CE NZ REMARK 480 THR C 136 CG2 REMARK 480 GLU C 151 CD OE1 OE2 REMARK 480 LYS D 56 CG CD CE NZ REMARK 480 LEU D 114 CD1 REMARK 480 LYS D 122 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CB GLU A 32 NE2 GLN D 0 1565 1.86 REMARK 500 CG GLU A 32 NE2 GLN D 0 1565 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 69 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 53 111.56 -164.93 REMARK 500 PHE A 81 57.53 -118.52 REMARK 500 SER B 28 146.23 -175.79 REMARK 500 ASN B 53 121.53 -172.14 REMARK 500 ILE B 71 104.48 -50.91 REMARK 500 LYS B 96 15.58 -66.99 REMARK 500 GLN B 105 -178.46 -63.90 REMARK 500 ALA B 120 101.60 -33.14 REMARK 500 LEU B 138 60.88 -153.47 REMARK 500 GLN C 146 74.53 -112.92 REMARK 500 PHE D -2 -60.15 144.94 REMARK 500 GLN D 47 76.34 -110.25 REMARK 500 LYS D 56 0.00 -56.79 REMARK 500 ASP D 131 -155.95 -94.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 1070 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA B 1070 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3Q98 RELATED DB: PDB REMARK 900 RELATED ID: 3Q9N RELATED DB: PDB REMARK 900 RELATED ID: 3QA9 RELATED DB: PDB DBREF 3Q9U A 0 140 PDB 3Q9U 3Q9U 0 140 DBREF 3Q9U B 0 140 PDB 3Q9U 3Q9U 0 140 DBREF 3Q9U C -3 154 PDB 3Q9U 3Q9U -3 154 DBREF 3Q9U D -3 154 PDB 3Q9U 3Q9U -3 154 SEQRES 1 A 141 ALA THR ARG PRO ILE ASP GLY LEU THR ASP GLU GLY ILE SEQRES 2 A 141 ARG GLU THR LEU THR ARG TYR LYS LYS ILE ALA LEU VAL SEQRES 3 A 141 GLY ALA SER PRO LYS PRO GLU ARG ASP ALA ASN ILE VAL SEQRES 4 A 141 MET LYS TYR LEU LEU GLU HIS GLY TYR ASP VAL TYR PRO SEQRES 5 A 141 VAL ASN PRO ASN TYR GLU GLU VAL LEU GLY ARG LYS CYS SEQRES 6 A 141 TYR PRO SER VAL LEU ASP ILE PRO ASP LYS ILE GLU VAL SEQRES 7 A 141 VAL ASP LEU PHE VAL ASN PRO ALA LYS ALA TRP ARG PHE SEQRES 8 A 141 VAL ALA TYR ALA ILE LYS LYS GLY ALA LYS VAL VAL TRP SEQRES 9 A 141 PHE GLN TYR ASN THR TYR TYR PRO LEU ALA ALA ARG GLN SEQRES 10 A 141 ALA LYS GLY ALA GLY LEU ILE ILE VAL ALA ASN ARG CYS SEQRES 11 A 141 MET MET ARG GLU HIS LYS ARG LEU LEU GLY GLU SEQRES 1 B 141 ALA THR ARG PRO ILE ASP GLY LEU THR ASP GLU GLY ILE SEQRES 2 B 141 ARG GLU THR LEU THR ARG TYR LYS LYS ILE ALA LEU VAL SEQRES 3 B 141 GLY ALA SER PRO LYS PRO GLU ARG ASP ALA ASN ILE VAL SEQRES 4 B 141 MET LYS TYR LEU LEU GLU HIS GLY TYR ASP VAL TYR PRO SEQRES 5 B 141 VAL ASN PRO ASN TYR GLU GLU VAL LEU GLY ARG LYS CYS SEQRES 6 B 141 TYR PRO SER VAL LEU ASP ILE PRO ASP LYS ILE GLU VAL SEQRES 7 B 141 VAL ASP LEU PHE VAL ASN PRO ALA LYS ALA TRP ARG PHE SEQRES 8 B 141 VAL ALA TYR ALA ILE LYS LYS GLY ALA LYS VAL VAL TRP SEQRES 9 B 141 PHE GLN TYR ASN THR TYR TYR PRO LEU ALA ALA ARG GLN SEQRES 10 B 141 ALA LYS GLY ALA GLY LEU ILE ILE VAL ALA ASN ARG CYS SEQRES 11 B 141 MET MET ARG GLU HIS LYS ARG LEU LEU GLY GLU SEQRES 1 C 158 ALA PHE GLY GLN ASP LEU GLY LYS LYS LEU LEU GLU ALA SEQRES 2 C 158 ALA ALA ALA GLY GLN ASP ASP GLU VAL ARG ILE LEU MET SEQRES 3 C 158 ALA ASN GLY ALA ASP VAL ASN ALA THR ASP ASP ASN GLY SEQRES 4 C 158 LEU THR PRO LEU HIS LEU ALA ALA ALA ASN GLY GLN LEU SEQRES 5 C 158 GLU ILE VAL GLU VAL LEU LEU LYS ASN GLY ALA ASP VAL SEQRES 6 C 158 ASN ALA SER ASP SER ALA GLY ILE THR PRO LEU HIS LEU SEQRES 7 C 158 ALA ALA TYR ASP GLY HIS LEU GLU ILE VAL GLU VAL LEU SEQRES 8 C 158 LEU LYS HIS GLY ALA ASP VAL ASN ALA TYR ASP ARG ALA SEQRES 9 C 158 GLY TRP THR PRO LEU HIS LEU ALA ALA LEU SER GLY GLN SEQRES 10 C 158 LEU GLU ILE VAL GLU VAL LEU LEU LYS HIS GLY ALA ASP SEQRES 11 C 158 VAL ASN ALA GLN ASP ALA LEU GLY LEU THR ALA PHE ASP SEQRES 12 C 158 ILE SER ILE ASN GLN GLY GLN GLU ASP LEU ALA GLU ILE SEQRES 13 C 158 LEU GLN SEQRES 1 D 158 ALA PHE GLY GLN ASP LEU GLY LYS LYS LEU LEU GLU ALA SEQRES 2 D 158 ALA ALA ALA GLY GLN ASP ASP GLU VAL ARG ILE LEU MET SEQRES 3 D 158 ALA ASN GLY ALA ASP VAL ASN ALA THR ASP ASP ASN GLY SEQRES 4 D 158 LEU THR PRO LEU HIS LEU ALA ALA ALA ASN GLY GLN LEU SEQRES 5 D 158 GLU ILE VAL GLU VAL LEU LEU LYS ASN GLY ALA ASP VAL SEQRES 6 D 158 ASN ALA SER ASP SER ALA GLY ILE THR PRO LEU HIS LEU SEQRES 7 D 158 ALA ALA TYR ASP GLY HIS LEU GLU ILE VAL GLU VAL LEU SEQRES 8 D 158 LEU LYS HIS GLY ALA ASP VAL ASN ALA TYR ASP ARG ALA SEQRES 9 D 158 GLY TRP THR PRO LEU HIS LEU ALA ALA LEU SER GLY GLN SEQRES 10 D 158 LEU GLU ILE VAL GLU VAL LEU LEU LYS HIS GLY ALA ASP SEQRES 11 D 158 VAL ASN ALA GLN ASP ALA LEU GLY LEU THR ALA PHE ASP SEQRES 12 D 158 ILE SER ILE ASN GLN GLY GLN GLU ASP LEU ALA GLU ILE SEQRES 13 D 158 LEU GLN HET COA A1070 48 HET COA B1070 48 HETNAM COA COENZYME A FORMUL 5 COA 2(C21 H36 N7 O16 P3 S) HELIX 1 1 THR A 8 TYR A 19 1 12 HELIX 2 2 ARG A 33 GLU A 44 1 12 HELIX 3 3 ASN A 83 TRP A 88 1 6 HELIX 4 4 ARG A 89 GLY A 98 1 10 HELIX 5 5 TYR A 110 ALA A 114 5 5 HELIX 6 6 CYS A 129 LEU A 138 1 10 HELIX 7 7 THR B 8 TYR B 19 1 12 HELIX 8 8 ARG B 33 GLU B 44 1 12 HELIX 9 9 LYS B 86 TRP B 88 5 3 HELIX 10 10 ARG B 89 LYS B 96 1 8 HELIX 11 11 TYR B 110 ALA B 114 5 5 HELIX 12 12 CYS B 129 LEU B 138 1 10 HELIX 13 13 PHE C -2 GLY C 13 1 16 HELIX 14 14 GLN C 14 ALA C 23 1 10 HELIX 15 15 THR C 37 ASN C 45 1 9 HELIX 16 16 GLN C 47 ASN C 57 1 11 HELIX 17 17 THR C 70 ASP C 78 1 9 HELIX 18 18 HIS C 80 HIS C 90 1 11 HELIX 19 19 THR C 103 SER C 111 1 9 HELIX 20 20 GLN C 113 HIS C 123 1 11 HELIX 21 21 THR C 136 GLY C 145 1 10 HELIX 22 22 GLN C 146 LEU C 153 1 8 HELIX 23 23 PHE D -2 ALA D 12 1 15 HELIX 24 24 GLN D 14 ASN D 24 1 11 HELIX 25 25 THR D 37 GLY D 46 1 10 HELIX 26 26 GLN D 47 LYS D 56 1 10 HELIX 27 27 THR D 70 ASP D 78 1 9 HELIX 28 28 HIS D 80 HIS D 90 1 11 HELIX 29 29 THR D 103 GLY D 112 1 10 HELIX 30 30 GLN D 113 HIS D 123 1 11 HELIX 31 31 THR D 136 GLN D 144 1 9 HELIX 32 32 GLN D 146 LEU D 153 1 8 SHEET 1 A 5 ASP A 48 VAL A 52 0 SHEET 2 A 5 LYS A 21 VAL A 25 1 N ILE A 22 O ASP A 48 SHEET 3 A 5 VAL A 77 LEU A 80 1 O ASP A 79 N ALA A 23 SHEET 4 A 5 VAL A 101 PHE A 104 1 O TRP A 103 N VAL A 78 SHEET 5 A 5 ILE A 123 ALA A 126 1 O VAL A 125 N PHE A 104 SHEET 1 B 2 GLU A 58 VAL A 59 0 SHEET 2 B 2 ARG A 62 LYS A 63 -1 O ARG A 62 N VAL A 59 SHEET 1 C 5 ASP B 48 VAL B 52 0 SHEET 2 C 5 LYS B 21 VAL B 25 1 N ILE B 22 O TYR B 50 SHEET 3 C 5 VAL B 77 LEU B 80 1 O VAL B 77 N ALA B 23 SHEET 4 C 5 VAL B 101 PHE B 104 1 O TRP B 103 N VAL B 78 SHEET 5 C 5 ILE B 123 ALA B 126 1 O VAL B 125 N VAL B 102 SHEET 1 D 2 GLU B 58 VAL B 59 0 SHEET 2 D 2 ARG B 62 LYS B 63 -1 O ARG B 62 N VAL B 59 CISPEP 1 GLY A 121 LEU A 122 0 -0.88 CISPEP 2 ALA D -3 PHE D -2 0 -0.40 SITE 1 AC1 20 GLY A 26 SER A 28 LYS A 30 ARG A 33 SITE 2 AC1 20 ASP A 34 VAL A 52 ASN A 53 ASN A 55 SITE 3 AC1 20 TYR A 56 VAL A 82 ASN A 83 LYS A 86 SITE 4 AC1 20 PHE A 90 GLN A 105 TYR A 106 CYS A 129 SITE 5 AC1 20 MET A 131 ARG A 132 GLU C 8 ASN C 45 SITE 1 AC2 24 VAL B 25 GLY B 26 SER B 28 LYS B 30 SITE 2 AC2 24 ARG B 33 ASP B 34 VAL B 52 ASN B 53 SITE 3 AC2 24 PRO B 54 ASN B 55 TYR B 56 PHE B 81 SITE 4 AC2 24 VAL B 82 ASN B 83 LYS B 86 PHE B 90 SITE 5 AC2 24 GLN B 105 TYR B 106 CYS B 129 ARG B 132 SITE 6 AC2 24 GLU D 8 ALA D 11 ALA D 12 ASN D 45 CRYST1 53.901 57.620 58.230 89.96 90.14 113.44 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018553 0.008046 0.000049 0.00000 SCALE2 0.000000 0.018917 0.000006 0.00000 SCALE3 0.000000 0.000000 0.017173 0.00000