HEADER PLANT PROTEIN 10-JAN-11 3QAC TITLE STRUCTURE OF AMARANTH 11S PROGLOBULIN SEED STORAGE PROTEIN FROM TITLE 2 AMARANTHUS HYPOCHONDRIACUS L. COMPND MOL_ID: 1; COMPND 2 MOLECULE: 11S GLOBULIN SEED STORAGE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AMARANTHUS HYPOCHONDRIACUS; SOURCE 3 ORGANISM_COMMON: PRINCE'S FEATHER; SOURCE 4 ORGANISM_TAXID: 28502; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA-GAMI(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21D KEYWDS 11S SEED STORAGE PROTEIN (GLOBULINS) FAMILY, SEED STORAGE PROTEIN, KEYWDS 2 PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.R.TANDANG-SILVAS,L.CARRAZCO-PENA,A.P.BARBA DE LA ROSA,J.A.OSUNA- AUTHOR 2 CASTRO,S.UTSUMI,B.MIKAMI,N.MARUYAMA REVDAT 2 01-NOV-23 3QAC 1 SEQADV REVDAT 1 11-JAN-12 3QAC 0 JRNL AUTH M.R.TANDANG-SILVAS,L.CARRAZCO-PENA,A.P.BARBA DE LA ROSA, JRNL AUTH 2 J.A.OSUNA-CASTRO,S.UTSUMI,B.MIKAMI,N.MARUYAMA JRNL TITL STRUCTURE OF AMARANTH 11S PROGLOBULIN, A MAJOR SEED STORAGE JRNL TITL 2 PROTEIN FROM AMARANTHUS HYPOCHONDRIACUS L. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.R.TANDANG-SILVAS,L.CARRAZCO-PENA,A.P.BARBA DE LA ROSA, REMARK 1 AUTH 2 J.A.OSUNA-CASTRO,S.UTSUMI,B.MIKAMI,N.MARUYAMA REMARK 1 TITL EXPRESSION, PURIFICATION AND PRELIMINARY CRYSTALLIZATION OF REMARK 1 TITL 2 AMARANTH 11S PROGLOBULIN SEED STORAGE PROTEIN FROM REMARK 1 TITL 3 AMARANTHUS HYPOCHONDRIACUS L. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 66 919 2010 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 20693668 REMARK 1 DOI 10.1107/S1744309110021032 REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 17027 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 864 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.4703 - 4.1310 0.98 2758 137 0.1699 0.2175 REMARK 3 2 4.1310 - 3.2804 0.99 2719 154 0.1564 0.2021 REMARK 3 3 3.2804 - 2.8662 0.98 2687 148 0.1978 0.2582 REMARK 3 4 2.8662 - 2.6043 0.99 2701 150 0.2283 0.3518 REMARK 3 5 2.6043 - 2.4178 0.99 2710 144 0.2476 0.3378 REMARK 3 6 2.4178 - 2.2753 0.94 2588 131 0.2468 0.3137 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 42.33 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.53510 REMARK 3 B22 (A**2) : 6.53510 REMARK 3 B33 (A**2) : -13.07020 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2984 REMARK 3 ANGLE : 1.216 4035 REMARK 3 CHIRALITY : 0.074 443 REMARK 3 PLANARITY : 0.004 540 REMARK 3 DIHEDRAL : 20.434 1096 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QAC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063393. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17067 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.275 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.46500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.010 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2E9Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG3350, 200MM AMMONIUM FORMATE, REMARK 280 PH 6.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.33500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.33500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.33500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -47.03850 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 81.47307 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -94.07700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 519 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLY A 3 REMARK 465 ARG A 4 REMARK 465 PHE A 5 REMARK 465 ARG A 6 REMARK 465 GLU A 7 REMARK 465 PHE A 8 REMARK 465 GLN A 9 REMARK 465 GLU A 95 REMARK 465 SER A 96 REMARK 465 GLY A 97 REMARK 465 SER A 98 REMARK 465 GLN A 99 REMARK 465 GLN A 100 REMARK 465 PHE A 101 REMARK 465 GLN A 102 REMARK 465 GLY A 103 REMARK 465 GLY A 104 REMARK 465 GLU A 105 REMARK 465 ASP A 106 REMARK 465 GLU A 107 REMARK 465 ARG A 108 REMARK 465 ILE A 109 REMARK 465 ARG A 110 REMARK 465 GLU A 111 REMARK 465 GLN A 112 REMARK 465 GLY A 113 REMARK 465 SER A 114 REMARK 465 ARG A 115 REMARK 465 LYS A 116 REMARK 465 PHE A 117 REMARK 465 GLY A 118 REMARK 465 MET A 119 REMARK 465 ARG A 120 REMARK 465 GLY A 121 REMARK 465 ASP A 122 REMARK 465 ARG A 123 REMARK 465 PHE A 124 REMARK 465 GLY A 193 REMARK 465 GLU A 194 REMARK 465 HIS A 195 REMARK 465 GLN A 196 REMARK 465 PHE A 197 REMARK 465 SER A 198 REMARK 465 ARG A 199 REMARK 465 GLU A 200 REMARK 465 SER A 201 REMARK 465 ARG A 202 REMARK 465 ARG A 203 REMARK 465 GLY A 204 REMARK 465 GLU A 205 REMARK 465 ARG A 206 REMARK 465 GLN A 248 REMARK 465 VAL A 253 REMARK 465 ILE A 254 REMARK 465 LYS A 255 REMARK 465 PRO A 256 REMARK 465 PRO A 257 REMARK 465 SER A 258 REMARK 465 ARG A 259 REMARK 465 ALA A 260 REMARK 465 TRP A 261 REMARK 465 GLU A 262 REMARK 465 GLU A 263 REMARK 465 ARG A 264 REMARK 465 GLU A 265 REMARK 465 GLN A 266 REMARK 465 GLY A 267 REMARK 465 SER A 268 REMARK 465 ARG A 269 REMARK 465 GLY A 270 REMARK 465 SER A 271 REMARK 465 ARG A 272 REMARK 465 TYR A 273 REMARK 465 LEU A 274 REMARK 465 PRO A 275 REMARK 465 ASN A 276 REMARK 465 GLY A 277 REMARK 465 VAL A 278 REMARK 465 GLU A 279 REMARK 465 GLU A 280 REMARK 465 GLN A 455 REMARK 465 GLY A 456 REMARK 465 GLU A 457 REMARK 465 TYR A 458 REMARK 465 ARG A 459 REMARK 465 ARG A 460 REMARK 465 LYS A 461 REMARK 465 ILE A 462 REMARK 465 SER A 463 REMARK 465 ILE A 464 REMARK 465 ALA A 465 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 32 CG CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 27 NE REMARK 480 ARG A 132 CG CZ REMARK 480 ARG A 286 CG NE NH1 REMARK 480 GLU A 396 CD REMARK 480 ARG A 414 CG NE REMARK 480 ARG A 434 CG CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 86 76.92 -100.84 REMARK 500 LEU A 173 -158.59 -92.87 REMARK 500 PRO A 302 112.83 -32.75 REMARK 500 ALA A 304 -53.66 -120.63 REMARK 500 ASN A 311 -158.23 -138.49 REMARK 500 ASP A 369 79.93 -158.03 REMARK 500 ARG A 374 127.16 -39.47 REMARK 500 GLN A 382 130.01 -39.93 REMARK 500 ASN A 383 -11.65 79.88 REMARK 500 PHE A 391 -167.29 -100.15 REMARK 500 THR A 402 31.19 -81.81 REMARK 500 ASN A 405 55.82 38.14 REMARK 500 THR A 448 -49.49 72.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KGL RELATED DB: PDB REMARK 900 11S GLOBULIN FROM BRASSICA NAPUS REMARK 900 RELATED ID: 3KSC RELATED DB: PDB REMARK 900 11S GLOBULIN FROM PISUM SATIVUM L. REMARK 900 RELATED ID: 2E9Q RELATED DB: PDB REMARK 900 11S GLOBULIN FROM PUMPKIN REMARK 900 RELATED ID: 2D5F RELATED DB: PDB REMARK 900 11S GLOBULIN FROM SOYBEAN GLYCININ A3B4 REMARK 900 RELATED ID: 2D5H RELATED DB: PDB REMARK 900 11S GLOBULIN FROM SOYBEAN GLYCININ A3B4 REMARK 900 RELATED ID: 1OD5 RELATED DB: PDB REMARK 900 11S GLOBULIN FROM SOYBEAN GLYCININ A3B4 REMARK 900 RELATED ID: 1FXZ RELATED DB: PDB REMARK 900 11S GLOBULIN FROM SOYBEAN GLYCININ A1AB1B DBREF 3QAC A 2 465 UNP Q38712 Q38712_AMAHP 38 501 SEQADV 3QAC MET A 1 UNP Q38712 EXPRESSION TAG SEQRES 1 A 465 MET GLU GLY ARG PHE ARG GLU PHE GLN GLN GLY ASN GLU SEQRES 2 A 465 CYS GLN ILE ASP ARG LEU THR ALA LEU GLU PRO THR ASN SEQRES 3 A 465 ARG ILE GLN ALA GLU ARG GLY LEU THR GLU VAL TRP ASP SEQRES 4 A 465 SER ASN GLU GLN GLU PHE ARG CYS ALA GLY VAL SER VAL SEQRES 5 A 465 ILE ARG ARG THR ILE GLU PRO HIS GLY LEU LEU LEU PRO SEQRES 6 A 465 SER PHE THR SER ALA PRO GLU LEU ILE TYR ILE GLU GLN SEQRES 7 A 465 GLY ASN GLY ILE THR GLY MET MET ILE PRO GLY CYS PRO SEQRES 8 A 465 GLU THR TYR GLU SER GLY SER GLN GLN PHE GLN GLY GLY SEQRES 9 A 465 GLU ASP GLU ARG ILE ARG GLU GLN GLY SER ARG LYS PHE SEQRES 10 A 465 GLY MET ARG GLY ASP ARG PHE GLN ASP GLN HIS GLN LYS SEQRES 11 A 465 ILE ARG HIS LEU ARG GLU GLY ASP ILE PHE ALA MET PRO SEQRES 12 A 465 ALA GLY VAL SER HIS TRP ALA TYR ASN ASN GLY ASP GLN SEQRES 13 A 465 PRO LEU VAL ALA VAL ILE LEU ILE ASP THR ALA ASN HIS SEQRES 14 A 465 ALA ASN GLN LEU ASP LYS ASN PHE PRO THR ARG PHE TYR SEQRES 15 A 465 LEU ALA GLY LYS PRO GLN GLN GLU HIS SER GLY GLU HIS SEQRES 16 A 465 GLN PHE SER ARG GLU SER ARG ARG GLY GLU ARG ASN THR SEQRES 17 A 465 GLY ASN ILE PHE ARG GLY PHE GLU THR ARG LEU LEU ALA SEQRES 18 A 465 GLU SER PHE GLY VAL SER GLU GLU ILE ALA GLN LYS LEU SEQRES 19 A 465 GLN ALA GLU GLN ASP ASP ARG GLY ASN ILE VAL ARG VAL SEQRES 20 A 465 GLN GLU GLY LEU HIS VAL ILE LYS PRO PRO SER ARG ALA SEQRES 21 A 465 TRP GLU GLU ARG GLU GLN GLY SER ARG GLY SER ARG TYR SEQRES 22 A 465 LEU PRO ASN GLY VAL GLU GLU THR ILE CYS SER ALA ARG SEQRES 23 A 465 LEU ALA VAL ASN VAL ASP ASP PRO SER LYS ALA ASP VAL SEQRES 24 A 465 TYR THR PRO GLU ALA GLY ARG LEU THR THR VAL ASN SER SEQRES 25 A 465 PHE ASN LEU PRO ILE LEU ARG HIS LEU ARG LEU SER ALA SEQRES 26 A 465 ALA LYS GLY VAL LEU TYR ARG ASN ALA MET MET ALA PRO SEQRES 27 A 465 HIS TYR ASN LEU ASN ALA HIS ASN ILE MET TYR CYS VAL SEQRES 28 A 465 ARG GLY ARG GLY ARG ILE GLN ILE VAL ASN ASP GLN GLY SEQRES 29 A 465 GLN SER VAL PHE ASP GLU GLU LEU SER ARG GLY GLN LEU SEQRES 30 A 465 VAL VAL VAL PRO GLN ASN PHE ALA ILE VAL LYS GLN ALA SEQRES 31 A 465 PHE GLU ASP GLY PHE GLU TRP VAL SER PHE LYS THR SER SEQRES 32 A 465 GLU ASN ALA MET PHE GLN SER LEU ALA GLY ARG THR SER SEQRES 33 A 465 ALA ILE ARG SER LEU PRO ILE ASP VAL VAL SER ASN ILE SEQRES 34 A 465 TYR GLN ILE SER ARG GLU GLU ALA PHE GLY LEU LYS PHE SEQRES 35 A 465 ASN ARG PRO GLU THR THR LEU PHE ARG SER SER GLY GLN SEQRES 36 A 465 GLY GLU TYR ARG ARG LYS ILE SER ILE ALA FORMUL 2 HOH *100(H2 O) HELIX 1 1 GLU A 42 GLY A 49 1 8 HELIX 2 2 ASN A 210 PHE A 215 5 6 HELIX 3 3 GLU A 216 GLY A 225 1 10 HELIX 4 4 SER A 227 ALA A 236 1 10 HELIX 5 5 ILE A 317 ARG A 322 1 6 HELIX 6 6 SER A 416 LEU A 421 1 6 HELIX 7 7 PRO A 422 GLN A 431 1 10 HELIX 8 8 SER A 433 ASN A 443 1 11 SHEET 1 A 7 ASN A 26 ALA A 30 0 SHEET 2 A 7 GLY A 33 VAL A 37 -1 O VAL A 37 N ASN A 26 SHEET 3 A 7 SER A 51 ILE A 57 -1 O THR A 56 N LEU A 34 SHEET 4 A 7 LEU A 158 ILE A 164 -1 O ILE A 162 N ILE A 53 SHEET 5 A 7 GLU A 72 GLN A 78 -1 N TYR A 75 O VAL A 161 SHEET 6 A 7 ASP A 138 MET A 142 -1 O PHE A 140 N ILE A 74 SHEET 7 A 7 ALA A 288 ASN A 290 -1 O VAL A 289 N ILE A 139 SHEET 1 B 5 ILE A 131 ARG A 135 0 SHEET 2 B 5 ASN A 80 MET A 86 -1 N GLY A 81 O LEU A 134 SHEET 3 B 5 SER A 147 TYR A 151 -1 O TYR A 151 N ILE A 82 SHEET 4 B 5 GLY A 61 THR A 68 -1 N SER A 66 O HIS A 148 SHEET 5 B 5 ARG A 180 TYR A 182 -1 O PHE A 181 N PHE A 67 SHEET 1 C 5 ILE A 131 ARG A 135 0 SHEET 2 C 5 ASN A 80 MET A 86 -1 N GLY A 81 O LEU A 134 SHEET 3 C 5 SER A 147 TYR A 151 -1 O TYR A 151 N ILE A 82 SHEET 4 C 5 GLY A 61 THR A 68 -1 N SER A 66 O HIS A 148 SHEET 5 C 5 ILE A 244 ARG A 246 -1 O VAL A 245 N LEU A 62 SHEET 1 D 6 VAL A 299 THR A 301 0 SHEET 2 D 6 GLY A 305 VAL A 310 -1 O GLY A 305 N THR A 301 SHEET 3 D 6 SER A 324 LEU A 330 -1 O ALA A 325 N VAL A 310 SHEET 4 D 6 ALA A 385 LYS A 401 -1 O SER A 399 N ALA A 326 SHEET 5 D 6 ASN A 346 VAL A 360 -1 N TYR A 349 O VAL A 398 SHEET 6 D 6 SER A 366 SER A 373 -1 O VAL A 367 N ILE A 359 SHEET 1 E 5 LEU A 377 VAL A 380 0 SHEET 2 E 5 ASN A 346 VAL A 360 -1 N ASN A 346 O VAL A 380 SHEET 3 E 5 ALA A 385 LYS A 401 -1 O VAL A 398 N TYR A 349 SHEET 4 E 5 MET A 335 ASN A 341 -1 N HIS A 339 O ILE A 386 SHEET 5 E 5 PHE A 408 SER A 410 -1 O GLN A 409 N TYR A 340 SHEET 1 F 3 PHE A 408 SER A 410 0 SHEET 2 F 3 MET A 335 ASN A 341 -1 N TYR A 340 O GLN A 409 SHEET 3 F 3 LEU A 449 PHE A 450 -1 O PHE A 450 N MET A 335 SSBOND 1 CYS A 14 CYS A 47 1555 1555 2.02 SSBOND 2 CYS A 90 CYS A 283 1555 1555 2.04 CRYST1 94.077 94.077 74.670 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010630 0.006137 0.000000 0.00000 SCALE2 0.000000 0.012274 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013392 0.00000