HEADER TRANSFERASE 19-JAN-11 3QDQ TITLE COMPLEX BETWEEN 4-HYDROXYBUTYRATE COA-TRANSFERASE FROM CLOSTRIDIUM TITLE 2 AMINOBUTYRICUM AND COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-HYDROXYBUTYRATE COA-TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.8.3.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM AMINOBUTYRICUM; SOURCE 3 ORGANISM_TAXID: 33953; SOURCE 4 GENE: ABFT; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 CODONPLUS (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PASK-IBA3(+) KEYWDS COA TRANSFERASE FAMILY I; SINGLE SUBUNIT COA TRANSFERASE, COA, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.MESSERSCHMIDT,S.MACIEIRA REVDAT 4 13-SEP-23 3QDQ 1 REMARK SEQADV REVDAT 3 08-NOV-17 3QDQ 1 REMARK REVDAT 2 29-FEB-12 3QDQ 1 JRNL REVDAT 1 24-AUG-11 3QDQ 0 JRNL AUTH S.MACIEIRA,J.ZHANG,W.BUCKEL,A.MESSERSCHMIDT JRNL TITL CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN 4-HYDROXYBUTYRATE JRNL TITL 2 COA-TRANSFERASE FROM CLOSTRIDIUM AMINOBUTYRICUM AND COA. JRNL REF ARCH.MICROBIOL. V. 194 157 2012 JRNL REFN ISSN 0302-8933 JRNL PMID 21833509 JRNL DOI 10.1007/S00203-011-0737-2 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 18006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 959 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1242 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.3450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3414 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 162 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.49000 REMARK 3 B22 (A**2) : 2.49000 REMARK 3 B33 (A**2) : -4.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.328 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.240 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.838 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.925 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3538 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4793 ; 1.680 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 446 ; 7.057 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;40.715 ;24.965 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 599 ;19.840 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;14.636 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 536 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2628 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1854 ; 0.247 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2414 ; 0.317 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 252 ; 0.187 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 84 ; 0.253 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.167 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2271 ; 0.681 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3588 ; 1.164 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1418 ; 1.865 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1205 ; 2.775 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3QDQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063515. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : SI-DOUBLE MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18410 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : 0.12800 REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.60100 REMARK 200 R SYM FOR SHELL (I) : 0.60100 REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3GK7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION CONDITIONS: 0.1 M REMARK 280 SPERMIDINE, 20% PEG 550 MME, 0.1M HEPES, PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z+1/2 REMARK 290 4555 Y,-X,Z+1/2 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z+1/2 REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.69600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.69600 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.69600 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 43.69600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 43.69600 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 538 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 590 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 448 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 GLU A 447 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 70 O HOH A 603 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 69 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 32 -115.60 54.99 REMARK 500 ALA A 48 18.83 -67.14 REMARK 500 ASN A 52 69.03 24.68 REMARK 500 HIS A 57 -162.03 -177.35 REMARK 500 MET A 58 -127.10 -118.84 REMARK 500 ASP A 112 19.90 84.19 REMARK 500 SER A 138 -56.36 -163.94 REMARK 500 ASP A 139 -116.41 20.13 REMARK 500 SER A 180 112.56 -161.80 REMARK 500 ILE A 216 145.50 -38.72 REMARK 500 PRO A 220 77.28 -67.95 REMARK 500 ASP A 221 -47.41 -169.75 REMARK 500 ASP A 254 -8.32 -143.12 REMARK 500 TYR A 293 -72.72 -102.63 REMARK 500 ASP A 324 12.76 -140.26 REMARK 500 SER A 332 -115.03 -146.86 REMARK 500 HIS A 379 112.75 -26.62 REMARK 500 ASP A 391 -107.92 -133.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GK7 RELATED DB: PDB REMARK 900 4-HYDROXYBUTYRATE COA-TRANSFERASE DBREF 3QDQ A 1 438 UNP Q9RM86 Q9RM86_CLOAM 1 438 SEQADV 3QDQ SER A 439 UNP Q9RM86 EXPRESSION TAG SEQADV 3QDQ ALA A 440 UNP Q9RM86 EXPRESSION TAG SEQADV 3QDQ TRP A 441 UNP Q9RM86 EXPRESSION TAG SEQADV 3QDQ SER A 442 UNP Q9RM86 EXPRESSION TAG SEQADV 3QDQ HIS A 443 UNP Q9RM86 EXPRESSION TAG SEQADV 3QDQ PRO A 444 UNP Q9RM86 EXPRESSION TAG SEQADV 3QDQ GLN A 445 UNP Q9RM86 EXPRESSION TAG SEQADV 3QDQ PHE A 446 UNP Q9RM86 EXPRESSION TAG SEQADV 3QDQ GLU A 447 UNP Q9RM86 EXPRESSION TAG SEQADV 3QDQ LYS A 448 UNP Q9RM86 EXPRESSION TAG SEQRES 1 A 448 MET ASP TRP LYS LYS ILE TYR GLU ASP ARG THR CYS THR SEQRES 2 A 448 ALA ASP GLU ALA VAL LYS SER ILE LYS SER GLY ASP ARG SEQRES 3 A 448 VAL LEU PHE ALA HIS CYS VAL ALA GLU PRO PRO VAL LEU SEQRES 4 A 448 VAL GLU ALA MET VAL ALA ASN ALA ALA ALA TYR LYS ASN SEQRES 5 A 448 VAL THR VAL SER HIS MET VAL THR LEU GLY LYS GLY GLU SEQRES 6 A 448 TYR SER LYS PRO GLU TYR LYS GLU ASN PHE THR PHE GLU SEQRES 7 A 448 GLY TRP PHE THR SER PRO SER THR ARG GLY SER ILE ALA SEQRES 8 A 448 GLU GLY HIS GLY GLN PHE VAL PRO VAL PHE PHE HIS GLU SEQRES 9 A 448 VAL PRO SER LEU ILE ARG LYS ASP ILE PHE HIS VAL ASP SEQRES 10 A 448 VAL PHE MET VAL MET VAL SER PRO PRO ASP HIS ASN GLY SEQRES 11 A 448 PHE CYS CYS VAL GLY VAL SER SER ASP TYR THR MET GLN SEQRES 12 A 448 ALA ILE LYS SER ALA LYS ILE VAL LEU ALA GLU VAL ASN SEQRES 13 A 448 ASP GLN VAL PRO VAL VAL TYR GLY ASP THR PHE VAL HIS SEQRES 14 A 448 VAL SER GLU ILE ASP LYS PHE VAL GLU THR SER HIS PRO SEQRES 15 A 448 LEU PRO GLU ILE GLY LEU PRO LYS ILE GLY GLU VAL GLU SEQRES 16 A 448 ALA ALA ILE GLY LYS HIS CYS ALA SER LEU ILE GLU ASP SEQRES 17 A 448 GLY SER THR LEU GLN LEU GLY ILE GLY ALA ILE PRO ASP SEQRES 18 A 448 ALA VAL LEU SER GLN LEU LYS ASP LYS LYS HIS LEU GLY SEQRES 19 A 448 ILE HIS SER GLU MET ILE SER ASP GLY VAL VAL ASP LEU SEQRES 20 A 448 TYR GLU ALA GLY VAL ILE ASP CYS SER GLN LYS SER ILE SEQRES 21 A 448 ASP LYS GLY LYS MET ALA ILE THR PHE LEU MET GLY THR SEQRES 22 A 448 LYS ARG LEU TYR ASP PHE ALA ALA ASN ASN PRO LYS VAL SEQRES 23 A 448 GLU LEU LYS PRO VAL ASP TYR ILE ASN HIS PRO SER VAL SEQRES 24 A 448 VAL ALA GLN CYS SER LYS MET VAL CYS ILE ASN ALA CYS SEQRES 25 A 448 LEU GLN VAL ASP PHE MET GLY GLN ILE VAL SER ASP SER SEQRES 26 A 448 ILE GLY THR LYS GLN PHE SER GLY VAL GLY GLY GLN VAL SEQRES 27 A 448 ASP PHE VAL ARG GLY ALA SER MET SER ILE ASP GLY LYS SEQRES 28 A 448 GLY LYS ALA ILE ILE ALA MET PRO SER VAL ALA LYS LYS SEQRES 29 A 448 LYS ASP GLY SER MET ILE SER LYS ILE VAL PRO PHE ILE SEQRES 30 A 448 ASP HIS GLY ALA ALA VAL THR THR SER ARG ASN ASP ALA SEQRES 31 A 448 ASP TYR VAL VAL THR GLU TYR GLY ILE ALA GLU MET LYS SEQRES 32 A 448 GLY LYS SER LEU GLN ASP ARG ALA ARG ALA LEU ILE ASN SEQRES 33 A 448 ILE ALA HIS PRO ASP PHE LYS ASP GLU LEU LYS ALA GLU SEQRES 34 A 448 PHE GLU LYS ARG PHE ASN ALA ALA PHE SER ALA TRP SER SEQRES 35 A 448 HIS PRO GLN PHE GLU LYS HET COA A 500 48 HETNAM COA COENZYME A FORMUL 2 COA C21 H36 N7 O16 P3 S FORMUL 3 HOH *162(H2 O) HELIX 1 1 ASP A 2 ARG A 10 1 9 HELIX 2 2 THR A 13 VAL A 18 1 6 HELIX 3 3 LYS A 19 ILE A 21 5 3 HELIX 4 4 HIS A 31 GLU A 35 5 5 HELIX 5 5 PRO A 36 ASN A 46 1 11 HELIX 6 6 ALA A 47 TYR A 50 5 4 HELIX 7 7 GLY A 64 GLU A 73 5 10 HELIX 8 8 THR A 86 GLY A 93 1 8 HELIX 9 9 PHE A 101 HIS A 103 5 3 HELIX 10 10 GLU A 104 LYS A 111 1 8 HELIX 11 11 TYR A 140 ALA A 148 1 9 HELIX 12 12 SER A 171 ILE A 173 5 3 HELIX 13 13 GLY A 192 ALA A 203 1 12 HELIX 14 14 VAL A 223 LEU A 227 5 5 HELIX 15 15 SER A 241 ALA A 250 1 10 HELIX 16 16 THR A 273 ALA A 281 1 9 HELIX 17 17 PRO A 290 ASN A 295 1 6 HELIX 18 18 HIS A 296 ALA A 301 1 6 HELIX 19 19 GLY A 336 MET A 346 1 11 HELIX 20 20 SER A 406 ILE A 417 1 12 HELIX 21 21 HIS A 419 ASN A 435 1 17 SHEET 1 A 7 GLN A 96 PHE A 97 0 SHEET 2 A 7 PHE A 75 GLY A 79 1 N PHE A 77 O GLN A 96 SHEET 3 A 7 VAL A 53 HIS A 57 1 N VAL A 55 O THR A 76 SHEET 4 A 7 ARG A 26 PHE A 29 1 N VAL A 27 O SER A 56 SHEET 5 A 7 VAL A 118 VAL A 121 1 O VAL A 118 N LEU A 28 SHEET 6 A 7 VAL A 151 ALA A 153 1 O LEU A 152 N PHE A 119 SHEET 7 A 7 LYS A 175 PHE A 176 1 O LYS A 175 N ALA A 153 SHEET 1 B 2 PHE A 131 CYS A 133 0 SHEET 2 B 2 PHE A 167 HIS A 169 -1 O VAL A 168 N CYS A 132 SHEET 1 C 8 VAL A 286 LEU A 288 0 SHEET 2 C 8 MET A 265 LEU A 270 1 N MET A 265 O GLU A 287 SHEET 3 C 8 GLY A 234 ILE A 240 1 N SER A 237 O ALA A 266 SHEET 4 C 8 THR A 211 LEU A 214 1 N LEU A 212 O HIS A 236 SHEET 5 C 8 MET A 306 ALA A 311 1 O VAL A 307 N THR A 211 SHEET 6 C 8 LYS A 353 ALA A 357 1 O ALA A 357 N ASN A 310 SHEET 7 C 8 TYR A 392 THR A 395 1 O TYR A 392 N ILE A 356 SHEET 8 C 8 GLY A 398 GLU A 401 -1 O GLY A 398 N THR A 395 SHEET 1 D 3 ILE A 321 VAL A 322 0 SHEET 2 D 3 GLN A 314 ASP A 316 -1 N GLN A 314 O VAL A 322 SHEET 3 D 3 ILE A 373 VAL A 374 1 O VAL A 374 N VAL A 315 SHEET 1 E 2 SER A 325 ILE A 326 0 SHEET 2 E 2 LYS A 329 GLN A 330 -1 O LYS A 329 N ILE A 326 SHEET 1 F 2 VAL A 361 LYS A 363 0 SHEET 2 F 2 MET A 369 SER A 371 -1 O ILE A 370 N ALA A 362 SITE 1 AC1 21 GLY A 215 ILE A 216 GLY A 217 ALA A 218 SITE 2 AC1 21 GLU A 238 ASN A 310 ALA A 311 LEU A 313 SITE 3 AC1 21 GLN A 314 SER A 323 PHE A 331 SER A 332 SITE 4 AC1 21 GLY A 333 VAL A 334 GLN A 337 ILE A 370 SITE 5 AC1 21 LYS A 372 HOH A 475 HOH A 479 HOH A 544 SITE 6 AC1 21 HOH A 567 CRYST1 118.215 118.215 87.392 90.00 90.00 90.00 P 42 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008459 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008459 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011443 0.00000