data_3QDY
#
_entry.id 3QDY
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.399
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3QDY pdb_00003qdy 10.2210/pdb3qdy/pdb
RCSB RCSB063523 ? ?
WWPDB D_1000063523 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2011-02-23
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2011-11-02
4 'Structure model' 2 0 2020-07-29
5 'Structure model' 2 1 2023-09-13
6 'Structure model' 2 2 2024-11-20
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Database references'
3 4 'Structure model' Advisory
4 4 'Structure model' 'Atomic model'
5 4 'Structure model' 'Data collection'
6 4 'Structure model' 'Derived calculations'
7 4 'Structure model' 'Non-polymer description'
8 4 'Structure model' 'Structure summary'
9 5 'Structure model' 'Data collection'
10 5 'Structure model' 'Database references'
11 5 'Structure model' 'Refinement description'
12 5 'Structure model' 'Structure summary'
13 6 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' atom_site
2 4 'Structure model' atom_site_anisotrop
3 4 'Structure model' chem_comp
4 4 'Structure model' entity
5 4 'Structure model' entity_name_com
6 4 'Structure model' pdbx_branch_scheme
7 4 'Structure model' pdbx_chem_comp_identifier
8 4 'Structure model' pdbx_entity_branch
9 4 'Structure model' pdbx_entity_branch_descriptor
10 4 'Structure model' pdbx_entity_branch_link
11 4 'Structure model' pdbx_entity_branch_list
12 4 'Structure model' pdbx_entity_nonpoly
13 4 'Structure model' pdbx_molecule_features
14 4 'Structure model' pdbx_nonpoly_scheme
15 4 'Structure model' pdbx_struct_assembly_gen
16 4 'Structure model' pdbx_unobs_or_zero_occ_atoms
17 4 'Structure model' struct_asym
18 4 'Structure model' struct_conn
19 4 'Structure model' struct_site
20 4 'Structure model' struct_site_gen
21 5 'Structure model' chem_comp
22 5 'Structure model' chem_comp_atom
23 5 'Structure model' chem_comp_bond
24 5 'Structure model' database_2
25 5 'Structure model' pdbx_initial_refinement_model
26 6 'Structure model' pdbx_entry_details
27 6 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_atom_site.B_iso_or_equiv'
2 4 'Structure model' '_atom_site.Cartn_x'
3 4 'Structure model' '_atom_site.Cartn_y'
4 4 'Structure model' '_atom_site.Cartn_z'
5 4 'Structure model' '_atom_site.auth_asym_id'
6 4 'Structure model' '_atom_site.auth_atom_id'
7 4 'Structure model' '_atom_site.auth_comp_id'
8 4 'Structure model' '_atom_site.auth_seq_id'
9 4 'Structure model' '_atom_site.label_asym_id'
10 4 'Structure model' '_atom_site.label_atom_id'
11 4 'Structure model' '_atom_site.label_comp_id'
12 4 'Structure model' '_atom_site.label_entity_id'
13 4 'Structure model' '_atom_site.type_symbol'
14 4 'Structure model' '_atom_site_anisotrop.U[1][1]'
15 4 'Structure model' '_atom_site_anisotrop.U[1][2]'
16 4 'Structure model' '_atom_site_anisotrop.U[1][3]'
17 4 'Structure model' '_atom_site_anisotrop.U[2][2]'
18 4 'Structure model' '_atom_site_anisotrop.U[2][3]'
19 4 'Structure model' '_atom_site_anisotrop.U[3][3]'
20 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id'
21 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id'
22 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id'
23 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id'
24 4 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id'
25 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id'
26 4 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id'
27 4 'Structure model' '_atom_site_anisotrop.type_symbol'
28 4 'Structure model' '_chem_comp.formula'
29 4 'Structure model' '_chem_comp.formula_weight'
30 4 'Structure model' '_chem_comp.id'
31 4 'Structure model' '_chem_comp.mon_nstd_flag'
32 4 'Structure model' '_chem_comp.name'
33 4 'Structure model' '_chem_comp.type'
34 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
35 5 'Structure model' '_chem_comp.pdbx_synonyms'
36 5 'Structure model' '_database_2.pdbx_DOI'
37 5 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3QDY
_pdbx_database_status.recvd_initial_deposition_date 2011-01-19
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 3QDS 'Structure of Apo Boletus edulis lectin' unspecified
PDB 3QDT 'Structure of Boletus edulis lectin in complex with T-antigen' unspecified
PDB 3QDU 'Structure of Boletus edulis lectin in complex with N,N-diacetyl chitobiose' unspecified
PDB 3QDV
'Structure of the orthorhombic form of the Boletus edulis lectin in complex with N-acetyl glucosamine and N-acetyl galactosamine'
unspecified
PDB 3QDW
'Structure of the hexagonal form of the Boletus edulis lectin in complex with N-acetyl glucosamine and N-acetyl galactosamine'
unspecified
PDB 3QDX 'Structure of the orthorhombic form of the Boletus edulis lectin in complex with T-antigen and N,N-diacetyl chitobiose'
unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bovi, M.' 1
'Carrizo, M.E.' 2
'Capaldi, S.' 3
'Perduca, M.' 4
'Chiarelli, L.R.' 5
'Galliano, M.' 6
'Monaco, H.L.' 7
#
_citation.id primary
_citation.title 'Structure of a lectin with antitumoral properties in king bolete (Boletus edulis) mushrooms.'
_citation.journal_abbrev Glycobiology
_citation.journal_volume 21
_citation.page_first 1000
_citation.page_last 1009
_citation.year 2011
_citation.journal_id_ASTM ?
_citation.country UK
_citation.journal_id_ISSN 0959-6658
_citation.journal_id_CSD 9999
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 21303815
_citation.pdbx_database_id_DOI 10.1093/glycob/cwr012
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Bovi, M.' 1 ?
primary 'Carrizo, M.E.' 2 ?
primary 'Capaldi, S.' 3 ?
primary 'Perduca, M.' 4 ?
primary 'Chiarelli, L.R.' 5 ?
primary 'Galliano, M.' 6 ?
primary 'Monaco, H.L.' 7 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat 'BOLETUS EDULIS LECTIN' 15851.834 2 ? ? ? ?
2 branched man 'beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose' 383.349 2 ? ? ? ?
3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 2 ? ? ? ?
4 water nat water 18.015 114 ? ? ? ?
#
_entity_name_com.entity_id 2
_entity_name_com.name 'Thomsen-Friedenreich antigen'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code
;(ACE)TYSITLRVFQRNPGRGFFSIVEKTVFHYANGGTWSEAKGTHTLTMGGSGTSGVLRFMSDKGELITVAVGVHNYKR
WCDVVTGLKPEETALVINPQYYNNGPRAYTREKQLAEYNVTSVVGTRFEVKYTVVEGNNLEANVIFS
;
_entity_poly.pdbx_seq_one_letter_code_can
;XTYSITLRVFQRNPGRGFFSIVEKTVFHYANGGTWSEAKGTHTLTMGGSGTSGVLRFMSDKGELITVAVGVHNYKRWCDV
VTGLKPEETALVINPQYYNNGPRAYTREKQLAEYNVTSVVGTRFEVKYTVVEGNNLEANVIFS
;
_entity_poly.pdbx_strand_id A,B
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 4
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 ACE n
1 2 THR n
1 3 TYR n
1 4 SER n
1 5 ILE n
1 6 THR n
1 7 LEU n
1 8 ARG n
1 9 VAL n
1 10 PHE n
1 11 GLN n
1 12 ARG n
1 13 ASN n
1 14 PRO n
1 15 GLY n
1 16 ARG n
1 17 GLY n
1 18 PHE n
1 19 PHE n
1 20 SER n
1 21 ILE n
1 22 VAL n
1 23 GLU n
1 24 LYS n
1 25 THR n
1 26 VAL n
1 27 PHE n
1 28 HIS n
1 29 TYR n
1 30 ALA n
1 31 ASN n
1 32 GLY n
1 33 GLY n
1 34 THR n
1 35 TRP n
1 36 SER n
1 37 GLU n
1 38 ALA n
1 39 LYS n
1 40 GLY n
1 41 THR n
1 42 HIS n
1 43 THR n
1 44 LEU n
1 45 THR n
1 46 MET n
1 47 GLY n
1 48 GLY n
1 49 SER n
1 50 GLY n
1 51 THR n
1 52 SER n
1 53 GLY n
1 54 VAL n
1 55 LEU n
1 56 ARG n
1 57 PHE n
1 58 MET n
1 59 SER n
1 60 ASP n
1 61 LYS n
1 62 GLY n
1 63 GLU n
1 64 LEU n
1 65 ILE n
1 66 THR n
1 67 VAL n
1 68 ALA n
1 69 VAL n
1 70 GLY n
1 71 VAL n
1 72 HIS n
1 73 ASN n
1 74 TYR n
1 75 LYS n
1 76 ARG n
1 77 TRP n
1 78 CYS n
1 79 ASP n
1 80 VAL n
1 81 VAL n
1 82 THR n
1 83 GLY n
1 84 LEU n
1 85 LYS n
1 86 PRO n
1 87 GLU n
1 88 GLU n
1 89 THR n
1 90 ALA n
1 91 LEU n
1 92 VAL n
1 93 ILE n
1 94 ASN n
1 95 PRO n
1 96 GLN n
1 97 TYR n
1 98 TYR n
1 99 ASN n
1 100 ASN n
1 101 GLY n
1 102 PRO n
1 103 ARG n
1 104 ALA n
1 105 TYR n
1 106 THR n
1 107 ARG n
1 108 GLU n
1 109 LYS n
1 110 GLN n
1 111 LEU n
1 112 ALA n
1 113 GLU n
1 114 TYR n
1 115 ASN n
1 116 VAL n
1 117 THR n
1 118 SER n
1 119 VAL n
1 120 VAL n
1 121 GLY n
1 122 THR n
1 123 ARG n
1 124 PHE n
1 125 GLU n
1 126 VAL n
1 127 LYS n
1 128 TYR n
1 129 THR n
1 130 VAL n
1 131 VAL n
1 132 GLU n
1 133 GLY n
1 134 ASN n
1 135 ASN n
1 136 LEU n
1 137 GLU n
1 138 ALA n
1 139 ASN n
1 140 VAL n
1 141 ILE n
1 142 PHE n
1 143 SER n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num ?
_entity_src_nat.pdbx_end_seq_num ?
_entity_src_nat.common_name ?
_entity_src_nat.pdbx_organism_scientific 'Boletus edulis'
_entity_src_nat.pdbx_ncbi_taxonomy_id 36056
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain ?
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide
3 oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DGalpb1-3DGalpNAca1-ROH 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0
3 2 '[][a-D-GalpNAc]{[(3+1)][b-D-Galp]{}}' LINUCS PDB-CARE ?
4 3 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0
5 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0
6 3 '[][b-D-GlcpNAc]{}' LINUCS PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 2 GAL C1 O1 1 A2G O3 HO3 sing ?
2 3 2 NAG C1 O1 1 NAG O4 HO4 sing ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose
;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE
;
'C8 H15 N O6' 221.208
ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose'
'C6 H12 O6' 180.156
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose
;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
;
'C8 H15 N O6' 221.208
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca
A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine
A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc
A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc
GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb
GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose
GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp
GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal
NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb
NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine
NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc
NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 ACE 1 0 0 ACE ACE A . n
A 1 2 THR 2 1 1 THR THR A . n
A 1 3 TYR 3 2 2 TYR TYR A . n
A 1 4 SER 4 3 3 SER SER A . n
A 1 5 ILE 5 4 4 ILE ILE A . n
A 1 6 THR 6 5 5 THR THR A . n
A 1 7 LEU 7 6 6 LEU LEU A . n
A 1 8 ARG 8 7 7 ARG ARG A . n
A 1 9 VAL 9 8 8 VAL VAL A . n
A 1 10 PHE 10 9 9 PHE PHE A . n
A 1 11 GLN 11 10 10 GLN GLN A . n
A 1 12 ARG 12 11 11 ARG ARG A . n
A 1 13 ASN 13 12 12 ASN ASN A . n
A 1 14 PRO 14 13 13 PRO PRO A . n
A 1 15 GLY 15 14 14 GLY GLY A . n
A 1 16 ARG 16 15 15 ARG ARG A . n
A 1 17 GLY 17 16 16 GLY GLY A . n
A 1 18 PHE 18 17 17 PHE PHE A . n
A 1 19 PHE 19 18 18 PHE PHE A . n
A 1 20 SER 20 19 19 SER SER A . n
A 1 21 ILE 21 20 20 ILE ILE A . n
A 1 22 VAL 22 21 21 VAL VAL A . n
A 1 23 GLU 23 22 22 GLU GLU A . n
A 1 24 LYS 24 23 23 LYS LYS A . n
A 1 25 THR 25 24 24 THR THR A . n
A 1 26 VAL 26 25 25 VAL VAL A . n
A 1 27 PHE 27 26 26 PHE PHE A . n
A 1 28 HIS 28 27 27 HIS HIS A . n
A 1 29 TYR 29 28 28 TYR TYR A . n
A 1 30 ALA 30 29 29 ALA ALA A . n
A 1 31 ASN 31 30 30 ASN ASN A . n
A 1 32 GLY 32 31 31 GLY GLY A . n
A 1 33 GLY 33 32 32 GLY GLY A . n
A 1 34 THR 34 33 33 THR THR A . n
A 1 35 TRP 35 34 34 TRP TRP A . n
A 1 36 SER 36 35 35 SER SER A . n
A 1 37 GLU 37 36 36 GLU GLU A . n
A 1 38 ALA 38 37 37 ALA ALA A . n
A 1 39 LYS 39 38 38 LYS LYS A . n
A 1 40 GLY 40 39 39 GLY GLY A . n
A 1 41 THR 41 40 40 THR THR A . n
A 1 42 HIS 42 41 41 HIS HIS A . n
A 1 43 THR 43 42 42 THR THR A . n
A 1 44 LEU 44 43 43 LEU LEU A . n
A 1 45 THR 45 44 44 THR THR A . n
A 1 46 MET 46 45 45 MET MET A . n
A 1 47 GLY 47 46 46 GLY GLY A . n
A 1 48 GLY 48 47 47 GLY GLY A . n
A 1 49 SER 49 48 48 SER SER A . n
A 1 50 GLY 50 49 49 GLY GLY A . n
A 1 51 THR 51 50 50 THR THR A . n
A 1 52 SER 52 51 51 SER SER A . n
A 1 53 GLY 53 52 52 GLY GLY A . n
A 1 54 VAL 54 53 53 VAL VAL A . n
A 1 55 LEU 55 54 54 LEU LEU A . n
A 1 56 ARG 56 55 55 ARG ARG A . n
A 1 57 PHE 57 56 56 PHE PHE A . n
A 1 58 MET 58 57 57 MET MET A . n
A 1 59 SER 59 58 58 SER SER A . n
A 1 60 ASP 60 59 59 ASP ASP A . n
A 1 61 LYS 61 60 60 LYS LYS A . n
A 1 62 GLY 62 61 61 GLY GLY A . n
A 1 63 GLU 63 62 62 GLU GLU A . n
A 1 64 LEU 64 63 63 LEU LEU A . n
A 1 65 ILE 65 64 64 ILE ILE A . n
A 1 66 THR 66 65 65 THR THR A . n
A 1 67 VAL 67 66 66 VAL VAL A . n
A 1 68 ALA 68 67 67 ALA ALA A . n
A 1 69 VAL 69 68 68 VAL VAL A . n
A 1 70 GLY 70 69 69 GLY GLY A . n
A 1 71 VAL 71 70 70 VAL VAL A . n
A 1 72 HIS 72 71 71 HIS HIS A . n
A 1 73 ASN 73 72 72 ASN ASN A . n
A 1 74 TYR 74 73 73 TYR TYR A . n
A 1 75 LYS 75 74 74 LYS LYS A . n
A 1 76 ARG 76 75 75 ARG ARG A . n
A 1 77 TRP 77 76 76 TRP TRP A . n
A 1 78 CYS 78 77 77 CYS CYS A . n
A 1 79 ASP 79 78 78 ASP ASP A . n
A 1 80 VAL 80 79 79 VAL VAL A . n
A 1 81 VAL 81 80 80 VAL VAL A . n
A 1 82 THR 82 81 81 THR THR A . n
A 1 83 GLY 83 82 82 GLY GLY A . n
A 1 84 LEU 84 83 83 LEU LEU A . n
A 1 85 LYS 85 84 84 LYS LYS A . n
A 1 86 PRO 86 85 85 PRO PRO A . n
A 1 87 GLU 87 86 86 GLU GLU A . n
A 1 88 GLU 88 87 87 GLU GLU A . n
A 1 89 THR 89 88 88 THR THR A . n
A 1 90 ALA 90 89 89 ALA ALA A . n
A 1 91 LEU 91 90 90 LEU LEU A . n
A 1 92 VAL 92 91 91 VAL VAL A . n
A 1 93 ILE 93 92 92 ILE ILE A . n
A 1 94 ASN 94 93 93 ASN ASN A . n
A 1 95 PRO 95 94 94 PRO PRO A . n
A 1 96 GLN 96 95 95 GLN GLN A . n
A 1 97 TYR 97 96 96 TYR TYR A . n
A 1 98 TYR 98 97 97 TYR TYR A . n
A 1 99 ASN 99 98 98 ASN ASN A . n
A 1 100 ASN 100 99 99 ASN ASN A . n
A 1 101 GLY 101 100 100 GLY GLY A . n
A 1 102 PRO 102 101 101 PRO PRO A . n
A 1 103 ARG 103 102 102 ARG ARG A . n
A 1 104 ALA 104 103 103 ALA ALA A . n
A 1 105 TYR 105 104 104 TYR TYR A . n
A 1 106 THR 106 105 105 THR THR A . n
A 1 107 ARG 107 106 106 ARG ARG A . n
A 1 108 GLU 108 107 107 GLU GLU A . n
A 1 109 LYS 109 108 108 LYS LYS A . n
A 1 110 GLN 110 109 109 GLN GLN A . n
A 1 111 LEU 111 110 110 LEU LEU A . n
A 1 112 ALA 112 111 111 ALA ALA A . n
A 1 113 GLU 113 112 112 GLU GLU A . n
A 1 114 TYR 114 113 113 TYR TYR A . n
A 1 115 ASN 115 114 114 ASN ASN A . n
A 1 116 VAL 116 115 115 VAL VAL A . n
A 1 117 THR 117 116 116 THR THR A . n
A 1 118 SER 118 117 117 SER SER A . n
A 1 119 VAL 119 118 118 VAL VAL A . n
A 1 120 VAL 120 119 119 VAL VAL A . n
A 1 121 GLY 121 120 120 GLY GLY A . n
A 1 122 THR 122 121 121 THR THR A . n
A 1 123 ARG 123 122 122 ARG ARG A . n
A 1 124 PHE 124 123 123 PHE PHE A . n
A 1 125 GLU 125 124 124 GLU GLU A . n
A 1 126 VAL 126 125 125 VAL VAL A . n
A 1 127 LYS 127 126 126 LYS LYS A . n
A 1 128 TYR 128 127 127 TYR TYR A . n
A 1 129 THR 129 128 128 THR THR A . n
A 1 130 VAL 130 129 129 VAL VAL A . n
A 1 131 VAL 131 130 130 VAL VAL A . n
A 1 132 GLU 132 131 131 GLU GLU A . n
A 1 133 GLY 133 132 132 GLY GLY A . n
A 1 134 ASN 134 133 133 ASN ASN A . n
A 1 135 ASN 135 134 134 ASN ASN A . n
A 1 136 LEU 136 135 135 LEU LEU A . n
A 1 137 GLU 137 136 136 GLU GLU A . n
A 1 138 ALA 138 137 137 ALA ALA A . n
A 1 139 ASN 139 138 138 ASN ASN A . n
A 1 140 VAL 140 139 139 VAL VAL A . n
A 1 141 ILE 141 140 140 ILE ILE A . n
A 1 142 PHE 142 141 141 PHE PHE A . n
A 1 143 SER 143 142 142 SER SER A . n
B 1 1 ACE 1 0 0 ACE ACE B . n
B 1 2 THR 2 1 1 THR THR B . n
B 1 3 TYR 3 2 2 TYR TYR B . n
B 1 4 SER 4 3 3 SER SER B . n
B 1 5 ILE 5 4 4 ILE ILE B . n
B 1 6 THR 6 5 5 THR THR B . n
B 1 7 LEU 7 6 6 LEU LEU B . n
B 1 8 ARG 8 7 7 ARG ARG B . n
B 1 9 VAL 9 8 8 VAL VAL B . n
B 1 10 PHE 10 9 9 PHE PHE B . n
B 1 11 GLN 11 10 10 GLN GLN B . n
B 1 12 ARG 12 11 11 ARG ARG B . n
B 1 13 ASN 13 12 12 ASN ASN B . n
B 1 14 PRO 14 13 13 PRO PRO B . n
B 1 15 GLY 15 14 14 GLY GLY B . n
B 1 16 ARG 16 15 15 ARG ARG B . n
B 1 17 GLY 17 16 16 GLY GLY B . n
B 1 18 PHE 18 17 17 PHE PHE B . n
B 1 19 PHE 19 18 18 PHE PHE B . n
B 1 20 SER 20 19 19 SER SER B . n
B 1 21 ILE 21 20 20 ILE ILE B . n
B 1 22 VAL 22 21 21 VAL VAL B . n
B 1 23 GLU 23 22 22 GLU GLU B . n
B 1 24 LYS 24 23 23 LYS LYS B . n
B 1 25 THR 25 24 24 THR THR B . n
B 1 26 VAL 26 25 25 VAL VAL B . n
B 1 27 PHE 27 26 26 PHE PHE B . n
B 1 28 HIS 28 27 27 HIS HIS B . n
B 1 29 TYR 29 28 28 TYR TYR B . n
B 1 30 ALA 30 29 29 ALA ALA B . n
B 1 31 ASN 31 30 30 ASN ASN B . n
B 1 32 GLY 32 31 31 GLY GLY B . n
B 1 33 GLY 33 32 32 GLY GLY B . n
B 1 34 THR 34 33 33 THR THR B . n
B 1 35 TRP 35 34 34 TRP TRP B . n
B 1 36 SER 36 35 35 SER SER B . n
B 1 37 GLU 37 36 36 GLU GLU B . n
B 1 38 ALA 38 37 37 ALA ALA B . n
B 1 39 LYS 39 38 38 LYS LYS B . n
B 1 40 GLY 40 39 39 GLY GLY B . n
B 1 41 THR 41 40 40 THR THR B . n
B 1 42 HIS 42 41 41 HIS HIS B . n
B 1 43 THR 43 42 42 THR THR B . n
B 1 44 LEU 44 43 43 LEU LEU B . n
B 1 45 THR 45 44 44 THR THR B . n
B 1 46 MET 46 45 45 MET MET B . n
B 1 47 GLY 47 46 46 GLY GLY B . n
B 1 48 GLY 48 47 47 GLY GLY B . n
B 1 49 SER 49 48 48 SER SER B . n
B 1 50 GLY 50 49 49 GLY GLY B . n
B 1 51 THR 51 50 50 THR THR B . n
B 1 52 SER 52 51 51 SER SER B . n
B 1 53 GLY 53 52 52 GLY GLY B . n
B 1 54 VAL 54 53 53 VAL VAL B . n
B 1 55 LEU 55 54 54 LEU LEU B . n
B 1 56 ARG 56 55 55 ARG ARG B . n
B 1 57 PHE 57 56 56 PHE PHE B . n
B 1 58 MET 58 57 57 MET MET B . n
B 1 59 SER 59 58 58 SER SER B . n
B 1 60 ASP 60 59 59 ASP ASP B . n
B 1 61 LYS 61 60 60 LYS LYS B . n
B 1 62 GLY 62 61 61 GLY GLY B . n
B 1 63 GLU 63 62 62 GLU GLU B . n
B 1 64 LEU 64 63 63 LEU LEU B . n
B 1 65 ILE 65 64 64 ILE ILE B . n
B 1 66 THR 66 65 65 THR THR B . n
B 1 67 VAL 67 66 66 VAL VAL B . n
B 1 68 ALA 68 67 67 ALA ALA B . n
B 1 69 VAL 69 68 68 VAL VAL B . n
B 1 70 GLY 70 69 69 GLY GLY B . n
B 1 71 VAL 71 70 70 VAL VAL B . n
B 1 72 HIS 72 71 71 HIS HIS B . n
B 1 73 ASN 73 72 72 ASN ASN B . n
B 1 74 TYR 74 73 73 TYR TYR B . n
B 1 75 LYS 75 74 74 LYS LYS B . n
B 1 76 ARG 76 75 75 ARG ARG B . n
B 1 77 TRP 77 76 76 TRP TRP B . n
B 1 78 CYS 78 77 77 CYS CYS B . n
B 1 79 ASP 79 78 78 ASP ASP B . n
B 1 80 VAL 80 79 79 VAL VAL B . n
B 1 81 VAL 81 80 80 VAL VAL B . n
B 1 82 THR 82 81 81 THR THR B . n
B 1 83 GLY 83 82 82 GLY GLY B . n
B 1 84 LEU 84 83 83 LEU LEU B . n
B 1 85 LYS 85 84 84 LYS LYS B . n
B 1 86 PRO 86 85 85 PRO PRO B . n
B 1 87 GLU 87 86 86 GLU GLU B . n
B 1 88 GLU 88 87 87 GLU GLU B . n
B 1 89 THR 89 88 88 THR THR B . n
B 1 90 ALA 90 89 89 ALA ALA B . n
B 1 91 LEU 91 90 90 LEU LEU B . n
B 1 92 VAL 92 91 91 VAL VAL B . n
B 1 93 ILE 93 92 92 ILE ILE B . n
B 1 94 ASN 94 93 93 ASN ASN B . n
B 1 95 PRO 95 94 94 PRO PRO B . n
B 1 96 GLN 96 95 95 GLN GLN B . n
B 1 97 TYR 97 96 96 TYR TYR B . n
B 1 98 TYR 98 97 97 TYR TYR B . n
B 1 99 ASN 99 98 98 ASN ASN B . n
B 1 100 ASN 100 99 99 ASN ASN B . n
B 1 101 GLY 101 100 100 GLY GLY B . n
B 1 102 PRO 102 101 101 PRO PRO B . n
B 1 103 ARG 103 102 102 ARG ARG B . n
B 1 104 ALA 104 103 103 ALA ALA B . n
B 1 105 TYR 105 104 104 TYR TYR B . n
B 1 106 THR 106 105 105 THR THR B . n
B 1 107 ARG 107 106 106 ARG ARG B . n
B 1 108 GLU 108 107 107 GLU GLU B . n
B 1 109 LYS 109 108 108 LYS LYS B . n
B 1 110 GLN 110 109 109 GLN GLN B . n
B 1 111 LEU 111 110 110 LEU LEU B . n
B 1 112 ALA 112 111 111 ALA ALA B . n
B 1 113 GLU 113 112 112 GLU GLU B . n
B 1 114 TYR 114 113 113 TYR TYR B . n
B 1 115 ASN 115 114 114 ASN ASN B . n
B 1 116 VAL 116 115 115 VAL VAL B . n
B 1 117 THR 117 116 116 THR THR B . n
B 1 118 SER 118 117 117 SER SER B . n
B 1 119 VAL 119 118 118 VAL VAL B . n
B 1 120 VAL 120 119 119 VAL VAL B . n
B 1 121 GLY 121 120 120 GLY GLY B . n
B 1 122 THR 122 121 121 THR THR B . n
B 1 123 ARG 123 122 122 ARG ARG B . n
B 1 124 PHE 124 123 123 PHE PHE B . n
B 1 125 GLU 125 124 124 GLU GLU B . n
B 1 126 VAL 126 125 125 VAL VAL B . n
B 1 127 LYS 127 126 126 LYS LYS B . n
B 1 128 TYR 128 127 127 TYR TYR B . n
B 1 129 THR 129 128 128 THR THR B . n
B 1 130 VAL 130 129 129 VAL VAL B . n
B 1 131 VAL 131 130 130 VAL VAL B . n
B 1 132 GLU 132 131 131 GLU GLU B . n
B 1 133 GLY 133 132 132 GLY GLY B . n
B 1 134 ASN 134 133 133 ASN ASN B . n
B 1 135 ASN 135 134 134 ASN ASN B . n
B 1 136 LEU 136 135 135 LEU LEU B . n
B 1 137 GLU 137 136 136 GLU GLU B . n
B 1 138 ALA 138 137 137 ALA ALA B . n
B 1 139 ASN 139 138 138 ASN ASN B . n
B 1 140 VAL 140 139 139 VAL VAL B . n
B 1 141 ILE 141 140 140 ILE ILE B . n
B 1 142 PHE 142 141 141 PHE PHE B . n
B 1 143 SER 143 142 142 SER SER B . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
C 2 A2G 1 C A2G 1 A NGA 146 n
C 2 GAL 2 C GAL 2 A GAL 147 n
D 2 A2G 1 D A2G 1 B NGA 146 n
D 2 GAL 2 D GAL 2 B GAL 147 n
E 3 NAG 1 E NAG 1 A CBS 144 n
E 3 NAG 2 E NAG 2 A CBS 144 n
F 3 NAG 1 F NAG 1 B CBS 144 n
F 3 NAG 2 F NAG 2 B CBS 144 n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 HOH 1 143 5 HOH HOH A .
G 4 HOH 2 145 6 HOH HOH A .
G 4 HOH 3 148 8 HOH HOH A .
G 4 HOH 4 149 11 HOH HOH A .
G 4 HOH 5 150 19 HOH HOH A .
G 4 HOH 6 151 24 HOH HOH A .
G 4 HOH 7 152 25 HOH HOH A .
G 4 HOH 8 153 27 HOH HOH A .
G 4 HOH 9 154 32 HOH HOH A .
G 4 HOH 10 155 33 HOH HOH A .
G 4 HOH 11 156 34 HOH HOH A .
G 4 HOH 12 157 36 HOH HOH A .
G 4 HOH 13 158 37 HOH HOH A .
G 4 HOH 14 159 40 HOH HOH A .
G 4 HOH 15 160 41 HOH HOH A .
G 4 HOH 16 161 43 HOH HOH A .
G 4 HOH 17 162 45 HOH HOH A .
G 4 HOH 18 163 49 HOH HOH A .
G 4 HOH 19 164 50 HOH HOH A .
G 4 HOH 20 165 51 HOH HOH A .
G 4 HOH 21 166 52 HOH HOH A .
G 4 HOH 22 167 53 HOH HOH A .
G 4 HOH 23 168 57 HOH HOH A .
G 4 HOH 24 169 61 HOH HOH A .
G 4 HOH 25 170 62 HOH HOH A .
G 4 HOH 26 171 66 HOH HOH A .
G 4 HOH 27 172 74 HOH HOH A .
G 4 HOH 28 173 77 HOH HOH A .
G 4 HOH 29 174 80 HOH HOH A .
G 4 HOH 30 175 82 HOH HOH A .
G 4 HOH 31 176 83 HOH HOH A .
G 4 HOH 32 177 84 HOH HOH A .
G 4 HOH 33 178 86 HOH HOH A .
G 4 HOH 34 179 88 HOH HOH A .
G 4 HOH 35 180 91 HOH HOH A .
G 4 HOH 36 181 93 HOH HOH A .
G 4 HOH 37 182 94 HOH HOH A .
G 4 HOH 38 183 98 HOH HOH A .
G 4 HOH 39 184 100 HOH HOH A .
G 4 HOH 40 185 111 HOH HOH A .
G 4 HOH 41 186 112 HOH HOH A .
G 4 HOH 42 187 114 HOH HOH A .
H 4 HOH 1 143 1 HOH HOH B .
H 4 HOH 2 145 2 HOH HOH B .
H 4 HOH 3 148 3 HOH HOH B .
H 4 HOH 4 149 4 HOH HOH B .
H 4 HOH 5 150 7 HOH HOH B .
H 4 HOH 6 151 9 HOH HOH B .
H 4 HOH 7 152 10 HOH HOH B .
H 4 HOH 8 153 12 HOH HOH B .
H 4 HOH 9 154 13 HOH HOH B .
H 4 HOH 10 155 14 HOH HOH B .
H 4 HOH 11 156 15 HOH HOH B .
H 4 HOH 12 157 16 HOH HOH B .
H 4 HOH 13 158 17 HOH HOH B .
H 4 HOH 14 159 18 HOH HOH B .
H 4 HOH 15 160 20 HOH HOH B .
H 4 HOH 16 161 21 HOH HOH B .
H 4 HOH 17 162 22 HOH HOH B .
H 4 HOH 18 163 23 HOH HOH B .
H 4 HOH 19 164 26 HOH HOH B .
H 4 HOH 20 165 28 HOH HOH B .
H 4 HOH 21 166 29 HOH HOH B .
H 4 HOH 22 167 30 HOH HOH B .
H 4 HOH 23 168 31 HOH HOH B .
H 4 HOH 24 169 35 HOH HOH B .
H 4 HOH 25 170 38 HOH HOH B .
H 4 HOH 26 171 39 HOH HOH B .
H 4 HOH 27 172 42 HOH HOH B .
H 4 HOH 28 173 44 HOH HOH B .
H 4 HOH 29 174 46 HOH HOH B .
H 4 HOH 30 175 47 HOH HOH B .
H 4 HOH 31 176 48 HOH HOH B .
H 4 HOH 32 177 54 HOH HOH B .
H 4 HOH 33 178 55 HOH HOH B .
H 4 HOH 34 179 56 HOH HOH B .
H 4 HOH 35 180 58 HOH HOH B .
H 4 HOH 36 181 59 HOH HOH B .
H 4 HOH 37 182 60 HOH HOH B .
H 4 HOH 38 183 63 HOH HOH B .
H 4 HOH 39 184 64 HOH HOH B .
H 4 HOH 40 185 65 HOH HOH B .
H 4 HOH 41 186 67 HOH HOH B .
H 4 HOH 42 187 68 HOH HOH B .
H 4 HOH 43 188 69 HOH HOH B .
H 4 HOH 44 189 70 HOH HOH B .
H 4 HOH 45 190 71 HOH HOH B .
H 4 HOH 46 191 72 HOH HOH B .
H 4 HOH 47 192 73 HOH HOH B .
H 4 HOH 48 193 75 HOH HOH B .
H 4 HOH 49 194 76 HOH HOH B .
H 4 HOH 50 195 78 HOH HOH B .
H 4 HOH 51 196 79 HOH HOH B .
H 4 HOH 52 197 81 HOH HOH B .
H 4 HOH 53 198 85 HOH HOH B .
H 4 HOH 54 199 87 HOH HOH B .
H 4 HOH 55 200 89 HOH HOH B .
H 4 HOH 56 201 90 HOH HOH B .
H 4 HOH 57 202 92 HOH HOH B .
H 4 HOH 58 203 95 HOH HOH B .
H 4 HOH 59 204 96 HOH HOH B .
H 4 HOH 60 205 97 HOH HOH B .
H 4 HOH 61 206 99 HOH HOH B .
H 4 HOH 62 207 101 HOH HOH B .
H 4 HOH 63 208 102 HOH HOH B .
H 4 HOH 64 209 103 HOH HOH B .
H 4 HOH 65 210 104 HOH HOH B .
H 4 HOH 66 211 105 HOH HOH B .
H 4 HOH 67 212 106 HOH HOH B .
H 4 HOH 68 213 107 HOH HOH B .
H 4 HOH 69 214 108 HOH HOH B .
H 4 HOH 70 215 109 HOH HOH B .
H 4 HOH 71 216 110 HOH HOH B .
H 4 HOH 72 217 113 HOH HOH B .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
ADSC 'data collection' Quantum ? 1
MOLREP phasing . ? 2
REFMAC refinement 5.5.0109 ? 3
MOSFLM 'data reduction' . ? 4
SCALA 'data scaling' . ? 5
#
_cell.entry_id 3QDY
_cell.length_a 124.045
_cell.length_b 124.045
_cell.length_c 104.473
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 24
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 3QDY
_symmetry.space_group_name_H-M 'P 61 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 178
#
_exptl.entry_id 3QDY
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 3.66
_exptl_crystal.density_percent_sol 66.39
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 4.6
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.pdbx_details
'0.2M ammonium acetate, 0.1M sodium acetate, 30% PEG 4000, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K'
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 210r'
_diffrn_detector.pdbx_collection_date 2004-10-07
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Si(111)'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.0
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'ESRF BEAMLINE BM16'
_diffrn_source.pdbx_synchrotron_site ESRF
_diffrn_source.pdbx_synchrotron_beamline BM16
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.0
#
_reflns.entry_id 3QDY
_reflns.observed_criterion_sigma_I 0.0
_reflns.observed_criterion_sigma_F 0.0
_reflns.d_resolution_low 29.3
_reflns.d_resolution_high 2.0
_reflns.number_obs 32555
_reflns.number_all ?
_reflns.percent_possible_obs 100.0
_reflns.pdbx_Rmerge_I_obs 0.071
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 19.9
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 8.3
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 2.0
_reflns_shell.d_res_low 2.11
_reflns_shell.percent_possible_all 100.0
_reflns_shell.Rmerge_I_obs 0.285
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs 7.9
_reflns_shell.pdbx_redundancy 7.9
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.entry_id 3QDY
_refine.ls_number_reflns_obs 30853
_refine.ls_number_reflns_all 30853
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F .
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 29.27
_refine.ls_d_res_high 2.00
_refine.ls_percent_reflns_obs 99.92
_refine.ls_R_factor_obs 0.19292
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.19220
_refine.ls_R_factor_R_free 0.20610
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5.1
_refine.ls_number_reflns_R_free 1646
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.941
_refine.correlation_coeff_Fo_to_Fc_free 0.936
_refine.B_iso_mean 22.502
_refine.aniso_B[1][1] 0.68
_refine.aniso_B[2][2] 0.68
_refine.aniso_B[3][3] -1.02
_refine.aniso_B[1][2] 0.34
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.40
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model 'pdb entry 3QDW'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.133
_refine.pdbx_overall_ESU_R_Free 0.118
_refine.overall_SU_ML 0.084
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B 6.665
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 2240
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 82
_refine_hist.number_atoms_solvent 114
_refine_hist.number_atoms_total 2436
_refine_hist.d_res_high 2.00
_refine_hist.d_res_low 29.27
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.005 0.022 ? 2374 'X-RAY DIFFRACTION' ?
r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 0.815 1.977 ? 3222 'X-RAY DIFFRACTION' ?
r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg 5.275 5.000 ? 282 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg 28.781 23.208 ? 106 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg 11.154 15.000 ? 366 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg 12.321 15.000 ? 16 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.055 0.200 ? 372 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.003 0.021 ? 1770 'X-RAY DIFFRACTION' ?
r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_it 2.241 1.500 ? 1404 'X-RAY DIFFRACTION' ?
r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcangle_it 3.164 2.000 ? 2272 'X-RAY DIFFRACTION' ?
r_scbond_it 5.140 3.000 ? 970 'X-RAY DIFFRACTION' ?
r_scangle_it 7.360 4.500 ? 950 'X-RAY DIFFRACTION' ?
r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.000
_refine_ls_shell.d_res_low 2.052
_refine_ls_shell.number_reflns_R_work 2208
_refine_ls_shell.R_factor_R_work 0.224
_refine_ls_shell.percent_reflns_obs 100.00
_refine_ls_shell.R_factor_R_free 0.239
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 136
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.number_reflns_obs ?
#
_database_PDB_matrix.entry_id 3QDY
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 3QDY
_struct.title
'Structure of the hexagonal form of the Boletus edulis lectin in complex with T-antigen disaccharide and N,N-diacetyl chitobiose'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3QDY
_struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN'
_struct_keywords.text
;Boletus edulis, lectin, mushroom, T-antigen disaccharide, N, N-diacetyl chitobiose, Carbohydrate, Sugar Binding, SUGAR BINDING PROTEIN
;
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 1 ?
C N N 2 ?
D N N 2 ?
E N N 3 ?
F N N 3 ?
G N N 4 ?
H N N 4 ?
#
_struct_ref.id 1
_struct_ref.db_name PDB
_struct_ref.db_code 3QDY
_struct_ref.pdbx_db_accession 3QDY
_struct_ref.entity_id 1
_struct_ref.pdbx_align_begin ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_db_isoform ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 3QDY A 1 ? 143 ? 3QDY 0 ? 142 ? 0 142
2 1 3QDY B 1 ? 143 ? 3QDY 0 ? 142 ? 0 142
#
loop_
_pdbx_struct_assembly.id
_pdbx_struct_assembly.details
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
1 author_and_software_defined_assembly PISA tetrameric 4
2 software_defined_assembly PISA dimeric 2
3 software_defined_assembly PISA dimeric 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 11790 ?
1 MORE -17 ?
1 'SSA (A^2)' 20840 ?
2 'ABSA (A^2)' 4320 ?
2 MORE -3 ?
2 'SSA (A^2)' 12010 ?
3 'ABSA (A^2)' 4240 ?
3 MORE -1 ?
3 'SSA (A^2)' 12060 ?
#
loop_
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
_pdbx_struct_assembly_gen.asym_id_list
1 1,2 A,B,C,D,E,F,G,H
2 1,2 A,C,E,G
3 1,2 B,D,F,H
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000
1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 10_664 -y+1,-x+1,-z-1/6 0.5000000000 -0.8660254038 0.0000000000 62.0225000000 -0.8660254038
-0.5000000000 0.0000000000 107.4261212124 0.0000000000 0.0000000000 -1.0000000000 -17.4121666667
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ASN A 13 ? GLY A 17 ? ASN A 12 GLY A 16 5 ? 5
HELX_P HELX_P2 2 HIS A 28 ? ASN A 31 ? HIS A 27 ASN A 30 5 ? 4
HELX_P HELX_P3 3 THR A 89 ? ASN A 94 ? THR A 88 ASN A 93 1 ? 6
HELX_P HELX_P4 4 PRO A 95 ? TYR A 98 ? PRO A 94 TYR A 97 5 ? 4
HELX_P HELX_P5 5 ARG A 103 ? LYS A 109 ? ARG A 102 LYS A 108 1 ? 7
HELX_P HELX_P6 6 ASN B 13 ? GLY B 17 ? ASN B 12 GLY B 16 5 ? 5
HELX_P HELX_P7 7 THR B 89 ? ASN B 94 ? THR B 88 ASN B 93 1 ? 6
HELX_P HELX_P8 8 PRO B 95 ? TYR B 98 ? PRO B 94 TYR B 97 5 ? 4
HELX_P HELX_P9 9 ARG B 103 ? LYS B 109 ? ARG B 102 LYS B 108 1 ? 7
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A ACE 1 C ? ? ? 1_555 A THR 2 N ? ? A ACE 0 A THR 1 1_555 ? ? ? ? ? ? ? 1.330 ? ?
covale2 covale both ? B ACE 1 C ? ? ? 1_555 B THR 2 N ? ? B ACE 0 B THR 1 1_555 ? ? ? ? ? ? ? 1.327 ? ?
covale3 covale both ? C A2G . O3 ? ? ? 1_555 C GAL . C1 ? ? C A2G 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.434 ? ?
covale4 covale both ? D A2G . O3 ? ? ? 1_555 D GAL . C1 ? ? D A2G 1 D GAL 2 1_555 ? ? ? ? ? ? ? 1.432 ? ?
covale5 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.427 sing ?
covale6 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? F NAG 1 F NAG 2 1_555 ? ? ? ? ? ? ? 1.430 sing ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 ACE A 1 ? THR A 2 ? ACE A 0 ? 1_555 THR A 1 ? 1_555 . . THR 7 ACE None 'Terminal acetylation'
2 ACE B 1 ? THR B 2 ? ACE B 0 ? 1_555 THR B 1 ? 1_555 . . THR 7 ACE None 'Terminal acetylation'
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 6 ?
B ? 4 ?
C ? 6 ?
D ? 4 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? parallel
A 4 5 ? anti-parallel
A 5 6 ? anti-parallel
B 1 2 ? anti-parallel
B 2 3 ? anti-parallel
B 3 4 ? anti-parallel
C 1 2 ? anti-parallel
C 2 3 ? anti-parallel
C 3 4 ? parallel
C 4 5 ? anti-parallel
C 5 6 ? anti-parallel
D 1 2 ? anti-parallel
D 2 3 ? anti-parallel
D 3 4 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 GLY A 33 ? ALA A 38 ? GLY A 32 ALA A 37
A 2 THR A 41 ? MET A 46 ? THR A 40 MET A 45
A 3 TYR A 3 ? GLN A 11 ? TYR A 2 GLN A 10
A 4 ASN A 135 ? SER A 143 ? ASN A 134 SER A 142
A 5 ARG A 123 ? VAL A 130 ? ARG A 122 VAL A 129
A 6 GLU A 113 ? THR A 117 ? GLU A 112 THR A 116
B 1 PHE A 19 ? VAL A 26 ? PHE A 18 VAL A 25
B 2 SER A 52 ? SER A 59 ? SER A 51 SER A 58
B 3 LEU A 64 ? HIS A 72 ? LEU A 63 HIS A 71
B 4 LYS A 75 ? VAL A 81 ? LYS A 74 VAL A 80
C 1 GLY B 33 ? ALA B 38 ? GLY B 32 ALA B 37
C 2 THR B 41 ? MET B 46 ? THR B 40 MET B 45
C 3 TYR B 3 ? GLN B 11 ? TYR B 2 GLN B 10
C 4 ASN B 135 ? PHE B 142 ? ASN B 134 PHE B 141
C 5 ARG B 123 ? VAL B 130 ? ARG B 122 VAL B 129
C 6 GLU B 113 ? THR B 117 ? GLU B 112 THR B 116
D 1 PHE B 19 ? VAL B 26 ? PHE B 18 VAL B 25
D 2 SER B 52 ? SER B 59 ? SER B 51 SER B 58
D 3 LEU B 64 ? HIS B 72 ? LEU B 63 HIS B 71
D 4 LYS B 75 ? VAL B 81 ? LYS B 74 VAL B 80
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N SER A 36 ? N SER A 35 O THR A 43 ? O THR A 42
A 2 3 O MET A 46 ? O MET A 45 N TYR A 3 ? N TYR A 2
A 3 4 N PHE A 10 ? N PHE A 9 O VAL A 140 ? O VAL A 139
A 4 5 O SER A 143 ? O SER A 142 N ARG A 123 ? N ARG A 122
A 5 6 O VAL A 126 ? O VAL A 125 N TYR A 114 ? N TYR A 113
B 1 2 N VAL A 22 ? N VAL A 21 O ARG A 56 ? O ARG A 55
B 2 3 N PHE A 57 ? N PHE A 56 O ILE A 65 ? O ILE A 64
B 3 4 N HIS A 72 ? N HIS A 71 O LYS A 75 ? O LYS A 74
C 1 2 N SER B 36 ? N SER B 35 O THR B 43 ? O THR B 42
C 2 3 O MET B 46 ? O MET B 45 N TYR B 3 ? N TYR B 2
C 3 4 N PHE B 10 ? N PHE B 9 O VAL B 140 ? O VAL B 139
C 4 5 O ILE B 141 ? O ILE B 140 N GLU B 125 ? N GLU B 124
C 5 6 O VAL B 126 ? O VAL B 125 N TYR B 114 ? N TYR B 113
D 1 2 N VAL B 22 ? N VAL B 21 O ARG B 56 ? O ARG B 55
D 2 3 N PHE B 57 ? N PHE B 56 O ILE B 65 ? O ILE B 64
D 3 4 N HIS B 72 ? N HIS B 71 O LYS B 75 ? O LYS B 74
#
_pdbx_entry_details.entry_id 3QDY
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 TYR A 73 ? ? 81.02 6.93
2 1 ASN B 134 ? ? -115.34 78.70
#
_pdbx_molecule_features.prd_id PRD_900084
_pdbx_molecule_features.name 'Thomsen-Friedenreich antigen'
_pdbx_molecule_features.type Oligosaccharide
_pdbx_molecule_features.class Antigen
_pdbx_molecule_features.details oligosaccharide
#
loop_
_pdbx_molecule.instance_id
_pdbx_molecule.prd_id
_pdbx_molecule.asym_id
1 PRD_900084 C
2 PRD_900084 D
#
loop_
_pdbx_refine_tls.pdbx_refine_id
_pdbx_refine_tls.id
_pdbx_refine_tls.details
_pdbx_refine_tls.method
_pdbx_refine_tls.origin_x
_pdbx_refine_tls.origin_y
_pdbx_refine_tls.origin_z
_pdbx_refine_tls.T[1][1]
_pdbx_refine_tls.T[2][2]
_pdbx_refine_tls.T[3][3]
_pdbx_refine_tls.T[1][2]
_pdbx_refine_tls.T[1][3]
_pdbx_refine_tls.T[2][3]
_pdbx_refine_tls.L[1][1]
_pdbx_refine_tls.L[2][2]
_pdbx_refine_tls.L[3][3]
_pdbx_refine_tls.L[1][2]
_pdbx_refine_tls.L[1][3]
_pdbx_refine_tls.L[2][3]
_pdbx_refine_tls.S[1][1]
_pdbx_refine_tls.S[1][2]
_pdbx_refine_tls.S[1][3]
_pdbx_refine_tls.S[2][1]
_pdbx_refine_tls.S[2][2]
_pdbx_refine_tls.S[2][3]
_pdbx_refine_tls.S[3][1]
_pdbx_refine_tls.S[3][2]
_pdbx_refine_tls.S[3][3]
'X-RAY DIFFRACTION' 1 ? refined 41.0338 48.3655 3.4171 0.0561 0.2504 0.1195 0.0692 -0.0374 -0.0776 1.2585 0.6978 0.1048 -0.5083
-0.1655 0.0707 -0.0402 -0.3884 0.0155 -0.1005 0.1522 0.0231 0.0344 0.1245 -0.1120
'X-RAY DIFFRACTION' 2 ? refined 9.6990 55.0365 -16.2176 0.0803 0.0805 0.0845 0.0090 -0.0217 -0.0075 0.5884 0.0626 0.5854 -0.0868
0.0407 -0.0403 0.0894 0.0356 -0.0374 -0.0102 -0.0241 0.0035 0.0578 -0.0186 -0.0653
#
loop_
_pdbx_refine_tls_group.pdbx_refine_id
_pdbx_refine_tls_group.id
_pdbx_refine_tls_group.refine_tls_id
_pdbx_refine_tls_group.beg_auth_asym_id
_pdbx_refine_tls_group.beg_auth_seq_id
_pdbx_refine_tls_group.beg_label_asym_id
_pdbx_refine_tls_group.beg_label_seq_id
_pdbx_refine_tls_group.end_auth_asym_id
_pdbx_refine_tls_group.end_auth_seq_id
_pdbx_refine_tls_group.end_label_asym_id
_pdbx_refine_tls_group.end_label_seq_id
_pdbx_refine_tls_group.selection
_pdbx_refine_tls_group.selection_details
'X-RAY DIFFRACTION' 1 1 A 0 ? ? A 147 ? ? ? ?
'X-RAY DIFFRACTION' 2 2 B 0 ? ? B 147 ? ? ? ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
A2G O5 O N N 1
A2G C1 C N S 2
A2G O1 O N N 3
A2G C2 C N R 4
A2G N2 N N N 5
A2G C3 C N R 6
A2G O3 O N N 7
A2G C4 C N R 8
A2G O4 O N N 9
A2G C5 C N R 10
A2G C6 C N N 11
A2G O6 O N N 12
A2G C7 C N N 13
A2G O7 O N N 14
A2G C8 C N N 15
A2G H1 H N N 16
A2G HO1 H N N 17
A2G H2 H N N 18
A2G HN2 H N N 19
A2G H3 H N N 20
A2G HO3 H N N 21
A2G H4 H N N 22
A2G HO4 H N N 23
A2G H5 H N N 24
A2G H61 H N N 25
A2G H81 H N N 26
A2G H82 H N N 27
A2G H83 H N N 28
A2G H62 H N N 29
A2G HO6 H N N 30
ACE C C N N 31
ACE O O N N 32
ACE CH3 C N N 33
ACE H H N N 34
ACE H1 H N N 35
ACE H2 H N N 36
ACE H3 H N N 37
ALA N N N N 38
ALA CA C N S 39
ALA C C N N 40
ALA O O N N 41
ALA CB C N N 42
ALA OXT O N N 43
ALA H H N N 44
ALA H2 H N N 45
ALA HA H N N 46
ALA HB1 H N N 47
ALA HB2 H N N 48
ALA HB3 H N N 49
ALA HXT H N N 50
ARG N N N N 51
ARG CA C N S 52
ARG C C N N 53
ARG O O N N 54
ARG CB C N N 55
ARG CG C N N 56
ARG CD C N N 57
ARG NE N N N 58
ARG CZ C N N 59
ARG NH1 N N N 60
ARG NH2 N N N 61
ARG OXT O N N 62
ARG H H N N 63
ARG H2 H N N 64
ARG HA H N N 65
ARG HB2 H N N 66
ARG HB3 H N N 67
ARG HG2 H N N 68
ARG HG3 H N N 69
ARG HD2 H N N 70
ARG HD3 H N N 71
ARG HE H N N 72
ARG HH11 H N N 73
ARG HH12 H N N 74
ARG HH21 H N N 75
ARG HH22 H N N 76
ARG HXT H N N 77
ASN N N N N 78
ASN CA C N S 79
ASN C C N N 80
ASN O O N N 81
ASN CB C N N 82
ASN CG C N N 83
ASN OD1 O N N 84
ASN ND2 N N N 85
ASN OXT O N N 86
ASN H H N N 87
ASN H2 H N N 88
ASN HA H N N 89
ASN HB2 H N N 90
ASN HB3 H N N 91
ASN HD21 H N N 92
ASN HD22 H N N 93
ASN HXT H N N 94
ASP N N N N 95
ASP CA C N S 96
ASP C C N N 97
ASP O O N N 98
ASP CB C N N 99
ASP CG C N N 100
ASP OD1 O N N 101
ASP OD2 O N N 102
ASP OXT O N N 103
ASP H H N N 104
ASP H2 H N N 105
ASP HA H N N 106
ASP HB2 H N N 107
ASP HB3 H N N 108
ASP HD2 H N N 109
ASP HXT H N N 110
CYS N N N N 111
CYS CA C N R 112
CYS C C N N 113
CYS O O N N 114
CYS CB C N N 115
CYS SG S N N 116
CYS OXT O N N 117
CYS H H N N 118
CYS H2 H N N 119
CYS HA H N N 120
CYS HB2 H N N 121
CYS HB3 H N N 122
CYS HG H N N 123
CYS HXT H N N 124
GAL C1 C N R 125
GAL C2 C N R 126
GAL C3 C N S 127
GAL C4 C N R 128
GAL C5 C N R 129
GAL C6 C N N 130
GAL O1 O N N 131
GAL O2 O N N 132
GAL O3 O N N 133
GAL O4 O N N 134
GAL O5 O N N 135
GAL O6 O N N 136
GAL H1 H N N 137
GAL H2 H N N 138
GAL H3 H N N 139
GAL H4 H N N 140
GAL H5 H N N 141
GAL H61 H N N 142
GAL H62 H N N 143
GAL HO1 H N N 144
GAL HO2 H N N 145
GAL HO3 H N N 146
GAL HO4 H N N 147
GAL HO6 H N N 148
GLN N N N N 149
GLN CA C N S 150
GLN C C N N 151
GLN O O N N 152
GLN CB C N N 153
GLN CG C N N 154
GLN CD C N N 155
GLN OE1 O N N 156
GLN NE2 N N N 157
GLN OXT O N N 158
GLN H H N N 159
GLN H2 H N N 160
GLN HA H N N 161
GLN HB2 H N N 162
GLN HB3 H N N 163
GLN HG2 H N N 164
GLN HG3 H N N 165
GLN HE21 H N N 166
GLN HE22 H N N 167
GLN HXT H N N 168
GLU N N N N 169
GLU CA C N S 170
GLU C C N N 171
GLU O O N N 172
GLU CB C N N 173
GLU CG C N N 174
GLU CD C N N 175
GLU OE1 O N N 176
GLU OE2 O N N 177
GLU OXT O N N 178
GLU H H N N 179
GLU H2 H N N 180
GLU HA H N N 181
GLU HB2 H N N 182
GLU HB3 H N N 183
GLU HG2 H N N 184
GLU HG3 H N N 185
GLU HE2 H N N 186
GLU HXT H N N 187
GLY N N N N 188
GLY CA C N N 189
GLY C C N N 190
GLY O O N N 191
GLY OXT O N N 192
GLY H H N N 193
GLY H2 H N N 194
GLY HA2 H N N 195
GLY HA3 H N N 196
GLY HXT H N N 197
HIS N N N N 198
HIS CA C N S 199
HIS C C N N 200
HIS O O N N 201
HIS CB C N N 202
HIS CG C Y N 203
HIS ND1 N Y N 204
HIS CD2 C Y N 205
HIS CE1 C Y N 206
HIS NE2 N Y N 207
HIS OXT O N N 208
HIS H H N N 209
HIS H2 H N N 210
HIS HA H N N 211
HIS HB2 H N N 212
HIS HB3 H N N 213
HIS HD1 H N N 214
HIS HD2 H N N 215
HIS HE1 H N N 216
HIS HE2 H N N 217
HIS HXT H N N 218
HOH O O N N 219
HOH H1 H N N 220
HOH H2 H N N 221
ILE N N N N 222
ILE CA C N S 223
ILE C C N N 224
ILE O O N N 225
ILE CB C N S 226
ILE CG1 C N N 227
ILE CG2 C N N 228
ILE CD1 C N N 229
ILE OXT O N N 230
ILE H H N N 231
ILE H2 H N N 232
ILE HA H N N 233
ILE HB H N N 234
ILE HG12 H N N 235
ILE HG13 H N N 236
ILE HG21 H N N 237
ILE HG22 H N N 238
ILE HG23 H N N 239
ILE HD11 H N N 240
ILE HD12 H N N 241
ILE HD13 H N N 242
ILE HXT H N N 243
LEU N N N N 244
LEU CA C N S 245
LEU C C N N 246
LEU O O N N 247
LEU CB C N N 248
LEU CG C N N 249
LEU CD1 C N N 250
LEU CD2 C N N 251
LEU OXT O N N 252
LEU H H N N 253
LEU H2 H N N 254
LEU HA H N N 255
LEU HB2 H N N 256
LEU HB3 H N N 257
LEU HG H N N 258
LEU HD11 H N N 259
LEU HD12 H N N 260
LEU HD13 H N N 261
LEU HD21 H N N 262
LEU HD22 H N N 263
LEU HD23 H N N 264
LEU HXT H N N 265
LYS N N N N 266
LYS CA C N S 267
LYS C C N N 268
LYS O O N N 269
LYS CB C N N 270
LYS CG C N N 271
LYS CD C N N 272
LYS CE C N N 273
LYS NZ N N N 274
LYS OXT O N N 275
LYS H H N N 276
LYS H2 H N N 277
LYS HA H N N 278
LYS HB2 H N N 279
LYS HB3 H N N 280
LYS HG2 H N N 281
LYS HG3 H N N 282
LYS HD2 H N N 283
LYS HD3 H N N 284
LYS HE2 H N N 285
LYS HE3 H N N 286
LYS HZ1 H N N 287
LYS HZ2 H N N 288
LYS HZ3 H N N 289
LYS HXT H N N 290
MET N N N N 291
MET CA C N S 292
MET C C N N 293
MET O O N N 294
MET CB C N N 295
MET CG C N N 296
MET SD S N N 297
MET CE C N N 298
MET OXT O N N 299
MET H H N N 300
MET H2 H N N 301
MET HA H N N 302
MET HB2 H N N 303
MET HB3 H N N 304
MET HG2 H N N 305
MET HG3 H N N 306
MET HE1 H N N 307
MET HE2 H N N 308
MET HE3 H N N 309
MET HXT H N N 310
NAG C1 C N R 311
NAG C2 C N R 312
NAG C3 C N R 313
NAG C4 C N S 314
NAG C5 C N R 315
NAG C6 C N N 316
NAG C7 C N N 317
NAG C8 C N N 318
NAG N2 N N N 319
NAG O1 O N N 320
NAG O3 O N N 321
NAG O4 O N N 322
NAG O5 O N N 323
NAG O6 O N N 324
NAG O7 O N N 325
NAG H1 H N N 326
NAG H2 H N N 327
NAG H3 H N N 328
NAG H4 H N N 329
NAG H5 H N N 330
NAG H61 H N N 331
NAG H62 H N N 332
NAG H81 H N N 333
NAG H82 H N N 334
NAG H83 H N N 335
NAG HN2 H N N 336
NAG HO1 H N N 337
NAG HO3 H N N 338
NAG HO4 H N N 339
NAG HO6 H N N 340
PHE N N N N 341
PHE CA C N S 342
PHE C C N N 343
PHE O O N N 344
PHE CB C N N 345
PHE CG C Y N 346
PHE CD1 C Y N 347
PHE CD2 C Y N 348
PHE CE1 C Y N 349
PHE CE2 C Y N 350
PHE CZ C Y N 351
PHE OXT O N N 352
PHE H H N N 353
PHE H2 H N N 354
PHE HA H N N 355
PHE HB2 H N N 356
PHE HB3 H N N 357
PHE HD1 H N N 358
PHE HD2 H N N 359
PHE HE1 H N N 360
PHE HE2 H N N 361
PHE HZ H N N 362
PHE HXT H N N 363
PRO N N N N 364
PRO CA C N S 365
PRO C C N N 366
PRO O O N N 367
PRO CB C N N 368
PRO CG C N N 369
PRO CD C N N 370
PRO OXT O N N 371
PRO H H N N 372
PRO HA H N N 373
PRO HB2 H N N 374
PRO HB3 H N N 375
PRO HG2 H N N 376
PRO HG3 H N N 377
PRO HD2 H N N 378
PRO HD3 H N N 379
PRO HXT H N N 380
SER N N N N 381
SER CA C N S 382
SER C C N N 383
SER O O N N 384
SER CB C N N 385
SER OG O N N 386
SER OXT O N N 387
SER H H N N 388
SER H2 H N N 389
SER HA H N N 390
SER HB2 H N N 391
SER HB3 H N N 392
SER HG H N N 393
SER HXT H N N 394
THR N N N N 395
THR CA C N S 396
THR C C N N 397
THR O O N N 398
THR CB C N R 399
THR OG1 O N N 400
THR CG2 C N N 401
THR OXT O N N 402
THR H H N N 403
THR H2 H N N 404
THR HA H N N 405
THR HB H N N 406
THR HG1 H N N 407
THR HG21 H N N 408
THR HG22 H N N 409
THR HG23 H N N 410
THR HXT H N N 411
TRP N N N N 412
TRP CA C N S 413
TRP C C N N 414
TRP O O N N 415
TRP CB C N N 416
TRP CG C Y N 417
TRP CD1 C Y N 418
TRP CD2 C Y N 419
TRP NE1 N Y N 420
TRP CE2 C Y N 421
TRP CE3 C Y N 422
TRP CZ2 C Y N 423
TRP CZ3 C Y N 424
TRP CH2 C Y N 425
TRP OXT O N N 426
TRP H H N N 427
TRP H2 H N N 428
TRP HA H N N 429
TRP HB2 H N N 430
TRP HB3 H N N 431
TRP HD1 H N N 432
TRP HE1 H N N 433
TRP HE3 H N N 434
TRP HZ2 H N N 435
TRP HZ3 H N N 436
TRP HH2 H N N 437
TRP HXT H N N 438
TYR N N N N 439
TYR CA C N S 440
TYR C C N N 441
TYR O O N N 442
TYR CB C N N 443
TYR CG C Y N 444
TYR CD1 C Y N 445
TYR CD2 C Y N 446
TYR CE1 C Y N 447
TYR CE2 C Y N 448
TYR CZ C Y N 449
TYR OH O N N 450
TYR OXT O N N 451
TYR H H N N 452
TYR H2 H N N 453
TYR HA H N N 454
TYR HB2 H N N 455
TYR HB3 H N N 456
TYR HD1 H N N 457
TYR HD2 H N N 458
TYR HE1 H N N 459
TYR HE2 H N N 460
TYR HH H N N 461
TYR HXT H N N 462
VAL N N N N 463
VAL CA C N S 464
VAL C C N N 465
VAL O O N N 466
VAL CB C N N 467
VAL CG1 C N N 468
VAL CG2 C N N 469
VAL OXT O N N 470
VAL H H N N 471
VAL H2 H N N 472
VAL HA H N N 473
VAL HB H N N 474
VAL HG11 H N N 475
VAL HG12 H N N 476
VAL HG13 H N N 477
VAL HG21 H N N 478
VAL HG22 H N N 479
VAL HG23 H N N 480
VAL HXT H N N 481
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A2G O5 C5 sing N N 1
A2G C1 O5 sing N N 2
A2G C1 C2 sing N N 3
A2G C1 H1 sing N N 4
A2G O1 C1 sing N N 5
A2G O1 HO1 sing N N 6
A2G C2 C3 sing N N 7
A2G C2 H2 sing N N 8
A2G N2 C2 sing N N 9
A2G N2 HN2 sing N N 10
A2G C3 C4 sing N N 11
A2G C3 O3 sing N N 12
A2G C3 H3 sing N N 13
A2G O3 HO3 sing N N 14
A2G C4 O4 sing N N 15
A2G C4 H4 sing N N 16
A2G O4 HO4 sing N N 17
A2G C5 C4 sing N N 18
A2G C5 C6 sing N N 19
A2G C5 H5 sing N N 20
A2G C6 O6 sing N N 21
A2G C6 H61 sing N N 22
A2G C7 N2 sing N N 23
A2G O7 C7 doub N N 24
A2G C8 C7 sing N N 25
A2G C8 H81 sing N N 26
A2G C8 H82 sing N N 27
A2G C8 H83 sing N N 28
A2G C6 H62 sing N N 29
A2G O6 HO6 sing N N 30
ACE C O doub N N 31
ACE C CH3 sing N N 32
ACE C H sing N N 33
ACE CH3 H1 sing N N 34
ACE CH3 H2 sing N N 35
ACE CH3 H3 sing N N 36
ALA N CA sing N N 37
ALA N H sing N N 38
ALA N H2 sing N N 39
ALA CA C sing N N 40
ALA CA CB sing N N 41
ALA CA HA sing N N 42
ALA C O doub N N 43
ALA C OXT sing N N 44
ALA CB HB1 sing N N 45
ALA CB HB2 sing N N 46
ALA CB HB3 sing N N 47
ALA OXT HXT sing N N 48
ARG N CA sing N N 49
ARG N H sing N N 50
ARG N H2 sing N N 51
ARG CA C sing N N 52
ARG CA CB sing N N 53
ARG CA HA sing N N 54
ARG C O doub N N 55
ARG C OXT sing N N 56
ARG CB CG sing N N 57
ARG CB HB2 sing N N 58
ARG CB HB3 sing N N 59
ARG CG CD sing N N 60
ARG CG HG2 sing N N 61
ARG CG HG3 sing N N 62
ARG CD NE sing N N 63
ARG CD HD2 sing N N 64
ARG CD HD3 sing N N 65
ARG NE CZ sing N N 66
ARG NE HE sing N N 67
ARG CZ NH1 sing N N 68
ARG CZ NH2 doub N N 69
ARG NH1 HH11 sing N N 70
ARG NH1 HH12 sing N N 71
ARG NH2 HH21 sing N N 72
ARG NH2 HH22 sing N N 73
ARG OXT HXT sing N N 74
ASN N CA sing N N 75
ASN N H sing N N 76
ASN N H2 sing N N 77
ASN CA C sing N N 78
ASN CA CB sing N N 79
ASN CA HA sing N N 80
ASN C O doub N N 81
ASN C OXT sing N N 82
ASN CB CG sing N N 83
ASN CB HB2 sing N N 84
ASN CB HB3 sing N N 85
ASN CG OD1 doub N N 86
ASN CG ND2 sing N N 87
ASN ND2 HD21 sing N N 88
ASN ND2 HD22 sing N N 89
ASN OXT HXT sing N N 90
ASP N CA sing N N 91
ASP N H sing N N 92
ASP N H2 sing N N 93
ASP CA C sing N N 94
ASP CA CB sing N N 95
ASP CA HA sing N N 96
ASP C O doub N N 97
ASP C OXT sing N N 98
ASP CB CG sing N N 99
ASP CB HB2 sing N N 100
ASP CB HB3 sing N N 101
ASP CG OD1 doub N N 102
ASP CG OD2 sing N N 103
ASP OD2 HD2 sing N N 104
ASP OXT HXT sing N N 105
CYS N CA sing N N 106
CYS N H sing N N 107
CYS N H2 sing N N 108
CYS CA C sing N N 109
CYS CA CB sing N N 110
CYS CA HA sing N N 111
CYS C O doub N N 112
CYS C OXT sing N N 113
CYS CB SG sing N N 114
CYS CB HB2 sing N N 115
CYS CB HB3 sing N N 116
CYS SG HG sing N N 117
CYS OXT HXT sing N N 118
GAL C1 C2 sing N N 119
GAL C1 O1 sing N N 120
GAL C1 O5 sing N N 121
GAL C1 H1 sing N N 122
GAL C2 C3 sing N N 123
GAL C2 O2 sing N N 124
GAL C2 H2 sing N N 125
GAL C3 C4 sing N N 126
GAL C3 O3 sing N N 127
GAL C3 H3 sing N N 128
GAL C4 C5 sing N N 129
GAL C4 O4 sing N N 130
GAL C4 H4 sing N N 131
GAL C5 C6 sing N N 132
GAL C5 O5 sing N N 133
GAL C5 H5 sing N N 134
GAL C6 O6 sing N N 135
GAL C6 H61 sing N N 136
GAL C6 H62 sing N N 137
GAL O1 HO1 sing N N 138
GAL O2 HO2 sing N N 139
GAL O3 HO3 sing N N 140
GAL O4 HO4 sing N N 141
GAL O6 HO6 sing N N 142
GLN N CA sing N N 143
GLN N H sing N N 144
GLN N H2 sing N N 145
GLN CA C sing N N 146
GLN CA CB sing N N 147
GLN CA HA sing N N 148
GLN C O doub N N 149
GLN C OXT sing N N 150
GLN CB CG sing N N 151
GLN CB HB2 sing N N 152
GLN CB HB3 sing N N 153
GLN CG CD sing N N 154
GLN CG HG2 sing N N 155
GLN CG HG3 sing N N 156
GLN CD OE1 doub N N 157
GLN CD NE2 sing N N 158
GLN NE2 HE21 sing N N 159
GLN NE2 HE22 sing N N 160
GLN OXT HXT sing N N 161
GLU N CA sing N N 162
GLU N H sing N N 163
GLU N H2 sing N N 164
GLU CA C sing N N 165
GLU CA CB sing N N 166
GLU CA HA sing N N 167
GLU C O doub N N 168
GLU C OXT sing N N 169
GLU CB CG sing N N 170
GLU CB HB2 sing N N 171
GLU CB HB3 sing N N 172
GLU CG CD sing N N 173
GLU CG HG2 sing N N 174
GLU CG HG3 sing N N 175
GLU CD OE1 doub N N 176
GLU CD OE2 sing N N 177
GLU OE2 HE2 sing N N 178
GLU OXT HXT sing N N 179
GLY N CA sing N N 180
GLY N H sing N N 181
GLY N H2 sing N N 182
GLY CA C sing N N 183
GLY CA HA2 sing N N 184
GLY CA HA3 sing N N 185
GLY C O doub N N 186
GLY C OXT sing N N 187
GLY OXT HXT sing N N 188
HIS N CA sing N N 189
HIS N H sing N N 190
HIS N H2 sing N N 191
HIS CA C sing N N 192
HIS CA CB sing N N 193
HIS CA HA sing N N 194
HIS C O doub N N 195
HIS C OXT sing N N 196
HIS CB CG sing N N 197
HIS CB HB2 sing N N 198
HIS CB HB3 sing N N 199
HIS CG ND1 sing Y N 200
HIS CG CD2 doub Y N 201
HIS ND1 CE1 doub Y N 202
HIS ND1 HD1 sing N N 203
HIS CD2 NE2 sing Y N 204
HIS CD2 HD2 sing N N 205
HIS CE1 NE2 sing Y N 206
HIS CE1 HE1 sing N N 207
HIS NE2 HE2 sing N N 208
HIS OXT HXT sing N N 209
HOH O H1 sing N N 210
HOH O H2 sing N N 211
ILE N CA sing N N 212
ILE N H sing N N 213
ILE N H2 sing N N 214
ILE CA C sing N N 215
ILE CA CB sing N N 216
ILE CA HA sing N N 217
ILE C O doub N N 218
ILE C OXT sing N N 219
ILE CB CG1 sing N N 220
ILE CB CG2 sing N N 221
ILE CB HB sing N N 222
ILE CG1 CD1 sing N N 223
ILE CG1 HG12 sing N N 224
ILE CG1 HG13 sing N N 225
ILE CG2 HG21 sing N N 226
ILE CG2 HG22 sing N N 227
ILE CG2 HG23 sing N N 228
ILE CD1 HD11 sing N N 229
ILE CD1 HD12 sing N N 230
ILE CD1 HD13 sing N N 231
ILE OXT HXT sing N N 232
LEU N CA sing N N 233
LEU N H sing N N 234
LEU N H2 sing N N 235
LEU CA C sing N N 236
LEU CA CB sing N N 237
LEU CA HA sing N N 238
LEU C O doub N N 239
LEU C OXT sing N N 240
LEU CB CG sing N N 241
LEU CB HB2 sing N N 242
LEU CB HB3 sing N N 243
LEU CG CD1 sing N N 244
LEU CG CD2 sing N N 245
LEU CG HG sing N N 246
LEU CD1 HD11 sing N N 247
LEU CD1 HD12 sing N N 248
LEU CD1 HD13 sing N N 249
LEU CD2 HD21 sing N N 250
LEU CD2 HD22 sing N N 251
LEU CD2 HD23 sing N N 252
LEU OXT HXT sing N N 253
LYS N CA sing N N 254
LYS N H sing N N 255
LYS N H2 sing N N 256
LYS CA C sing N N 257
LYS CA CB sing N N 258
LYS CA HA sing N N 259
LYS C O doub N N 260
LYS C OXT sing N N 261
LYS CB CG sing N N 262
LYS CB HB2 sing N N 263
LYS CB HB3 sing N N 264
LYS CG CD sing N N 265
LYS CG HG2 sing N N 266
LYS CG HG3 sing N N 267
LYS CD CE sing N N 268
LYS CD HD2 sing N N 269
LYS CD HD3 sing N N 270
LYS CE NZ sing N N 271
LYS CE HE2 sing N N 272
LYS CE HE3 sing N N 273
LYS NZ HZ1 sing N N 274
LYS NZ HZ2 sing N N 275
LYS NZ HZ3 sing N N 276
LYS OXT HXT sing N N 277
MET N CA sing N N 278
MET N H sing N N 279
MET N H2 sing N N 280
MET CA C sing N N 281
MET CA CB sing N N 282
MET CA HA sing N N 283
MET C O doub N N 284
MET C OXT sing N N 285
MET CB CG sing N N 286
MET CB HB2 sing N N 287
MET CB HB3 sing N N 288
MET CG SD sing N N 289
MET CG HG2 sing N N 290
MET CG HG3 sing N N 291
MET SD CE sing N N 292
MET CE HE1 sing N N 293
MET CE HE2 sing N N 294
MET CE HE3 sing N N 295
MET OXT HXT sing N N 296
NAG C1 C2 sing N N 297
NAG C1 O1 sing N N 298
NAG C1 O5 sing N N 299
NAG C1 H1 sing N N 300
NAG C2 C3 sing N N 301
NAG C2 N2 sing N N 302
NAG C2 H2 sing N N 303
NAG C3 C4 sing N N 304
NAG C3 O3 sing N N 305
NAG C3 H3 sing N N 306
NAG C4 C5 sing N N 307
NAG C4 O4 sing N N 308
NAG C4 H4 sing N N 309
NAG C5 C6 sing N N 310
NAG C5 O5 sing N N 311
NAG C5 H5 sing N N 312
NAG C6 O6 sing N N 313
NAG C6 H61 sing N N 314
NAG C6 H62 sing N N 315
NAG C7 C8 sing N N 316
NAG C7 N2 sing N N 317
NAG C7 O7 doub N N 318
NAG C8 H81 sing N N 319
NAG C8 H82 sing N N 320
NAG C8 H83 sing N N 321
NAG N2 HN2 sing N N 322
NAG O1 HO1 sing N N 323
NAG O3 HO3 sing N N 324
NAG O4 HO4 sing N N 325
NAG O6 HO6 sing N N 326
PHE N CA sing N N 327
PHE N H sing N N 328
PHE N H2 sing N N 329
PHE CA C sing N N 330
PHE CA CB sing N N 331
PHE CA HA sing N N 332
PHE C O doub N N 333
PHE C OXT sing N N 334
PHE CB CG sing N N 335
PHE CB HB2 sing N N 336
PHE CB HB3 sing N N 337
PHE CG CD1 doub Y N 338
PHE CG CD2 sing Y N 339
PHE CD1 CE1 sing Y N 340
PHE CD1 HD1 sing N N 341
PHE CD2 CE2 doub Y N 342
PHE CD2 HD2 sing N N 343
PHE CE1 CZ doub Y N 344
PHE CE1 HE1 sing N N 345
PHE CE2 CZ sing Y N 346
PHE CE2 HE2 sing N N 347
PHE CZ HZ sing N N 348
PHE OXT HXT sing N N 349
PRO N CA sing N N 350
PRO N CD sing N N 351
PRO N H sing N N 352
PRO CA C sing N N 353
PRO CA CB sing N N 354
PRO CA HA sing N N 355
PRO C O doub N N 356
PRO C OXT sing N N 357
PRO CB CG sing N N 358
PRO CB HB2 sing N N 359
PRO CB HB3 sing N N 360
PRO CG CD sing N N 361
PRO CG HG2 sing N N 362
PRO CG HG3 sing N N 363
PRO CD HD2 sing N N 364
PRO CD HD3 sing N N 365
PRO OXT HXT sing N N 366
SER N CA sing N N 367
SER N H sing N N 368
SER N H2 sing N N 369
SER CA C sing N N 370
SER CA CB sing N N 371
SER CA HA sing N N 372
SER C O doub N N 373
SER C OXT sing N N 374
SER CB OG sing N N 375
SER CB HB2 sing N N 376
SER CB HB3 sing N N 377
SER OG HG sing N N 378
SER OXT HXT sing N N 379
THR N CA sing N N 380
THR N H sing N N 381
THR N H2 sing N N 382
THR CA C sing N N 383
THR CA CB sing N N 384
THR CA HA sing N N 385
THR C O doub N N 386
THR C OXT sing N N 387
THR CB OG1 sing N N 388
THR CB CG2 sing N N 389
THR CB HB sing N N 390
THR OG1 HG1 sing N N 391
THR CG2 HG21 sing N N 392
THR CG2 HG22 sing N N 393
THR CG2 HG23 sing N N 394
THR OXT HXT sing N N 395
TRP N CA sing N N 396
TRP N H sing N N 397
TRP N H2 sing N N 398
TRP CA C sing N N 399
TRP CA CB sing N N 400
TRP CA HA sing N N 401
TRP C O doub N N 402
TRP C OXT sing N N 403
TRP CB CG sing N N 404
TRP CB HB2 sing N N 405
TRP CB HB3 sing N N 406
TRP CG CD1 doub Y N 407
TRP CG CD2 sing Y N 408
TRP CD1 NE1 sing Y N 409
TRP CD1 HD1 sing N N 410
TRP CD2 CE2 doub Y N 411
TRP CD2 CE3 sing Y N 412
TRP NE1 CE2 sing Y N 413
TRP NE1 HE1 sing N N 414
TRP CE2 CZ2 sing Y N 415
TRP CE3 CZ3 doub Y N 416
TRP CE3 HE3 sing N N 417
TRP CZ2 CH2 doub Y N 418
TRP CZ2 HZ2 sing N N 419
TRP CZ3 CH2 sing Y N 420
TRP CZ3 HZ3 sing N N 421
TRP CH2 HH2 sing N N 422
TRP OXT HXT sing N N 423
TYR N CA sing N N 424
TYR N H sing N N 425
TYR N H2 sing N N 426
TYR CA C sing N N 427
TYR CA CB sing N N 428
TYR CA HA sing N N 429
TYR C O doub N N 430
TYR C OXT sing N N 431
TYR CB CG sing N N 432
TYR CB HB2 sing N N 433
TYR CB HB3 sing N N 434
TYR CG CD1 doub Y N 435
TYR CG CD2 sing Y N 436
TYR CD1 CE1 sing Y N 437
TYR CD1 HD1 sing N N 438
TYR CD2 CE2 doub Y N 439
TYR CD2 HD2 sing N N 440
TYR CE1 CZ doub Y N 441
TYR CE1 HE1 sing N N 442
TYR CE2 CZ sing Y N 443
TYR CE2 HE2 sing N N 444
TYR CZ OH sing N N 445
TYR OH HH sing N N 446
TYR OXT HXT sing N N 447
VAL N CA sing N N 448
VAL N H sing N N 449
VAL N H2 sing N N 450
VAL CA C sing N N 451
VAL CA CB sing N N 452
VAL CA HA sing N N 453
VAL C O doub N N 454
VAL C OXT sing N N 455
VAL CB CG1 sing N N 456
VAL CB CG2 sing N N 457
VAL CB HB sing N N 458
VAL CG1 HG11 sing N N 459
VAL CG1 HG12 sing N N 460
VAL CG1 HG13 sing N N 461
VAL CG2 HG21 sing N N 462
VAL CG2 HG22 sing N N 463
VAL CG2 HG23 sing N N 464
VAL OXT HXT sing N N 465
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 A2G 1 n
2 GAL 2 n
3 NAG 1 n
3 NAG 2 n
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 3QDW
_pdbx_initial_refinement_model.details 'pdb entry 3QDW'
#
_atom_sites.entry_id 3QDY
_atom_sites.fract_transf_matrix[1][1] 0.008062
_atom_sites.fract_transf_matrix[1][2] 0.004654
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.009309
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.009572
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_