HEADER TRANSPORT PROTEIN 20-JAN-11 3QE7 TITLE CRYSTAL STRUCTURE OF URACIL TRANSPORTER--URAA COMPND MOL_ID: 1; COMPND 2 MOLECULE: URACIL PERMEASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: URACIL TRANSPORTER; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: URAA, B2497, JW2482; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS URACIL PERMEASE, URACIL TRANSPORTER, URAA, TRANSPORTER, INNER KEYWDS 2 MEMBRANE PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.R.LU,S.LI,N.YAN REVDAT 4 20-MAR-24 3QE7 1 HETSYN REVDAT 3 29-JUL-20 3QE7 1 COMPND REMARK HETNAM SITE REVDAT 2 20-APR-11 3QE7 1 JRNL REVDAT 1 23-MAR-11 3QE7 0 JRNL AUTH F.LU,S.LI,Y.JIANG,J.JIANG,H.FAN,G.LU,D.DENG,S.DANG,X.ZHANG, JRNL AUTH 2 J.WANG,N.YAN JRNL TITL STRUCTURE AND MECHANISM OF THE URACIL TRANSPORTER URAA JRNL REF NATURE V. 472 243 2011 JRNL REFN ISSN 0028-0836 JRNL PMID 21423164 JRNL DOI 10.1038/NATURE09885 REMARK 2 REMARK 2 RESOLUTION. 2.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.3_473) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 18200 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 930 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9246 - 5.3163 0.96 2633 124 0.2915 0.3554 REMARK 3 2 5.3163 - 4.2210 0.99 2507 127 0.2229 0.2807 REMARK 3 3 4.2210 - 3.6878 0.99 2494 115 0.2118 0.2662 REMARK 3 4 3.6878 - 3.3508 0.99 2419 146 0.2041 0.2654 REMARK 3 5 3.3508 - 3.1107 1.00 2434 128 0.2361 0.2987 REMARK 3 6 3.1107 - 2.9273 0.99 2388 146 0.2820 0.3167 REMARK 3 7 2.9273 - 2.7808 0.99 2395 144 0.3004 0.3508 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.61 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 69.20 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 78.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.33030 REMARK 3 B22 (A**2) : 7.33030 REMARK 3 B33 (A**2) : -14.66060 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.033 3282 REMARK 3 ANGLE : 0.956 4223 REMARK 3 CHIRALITY : 0.071 538 REMARK 3 PLANARITY : 0.007 507 REMARK 3 DIHEDRAL : 14.625 1085 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 330:429 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8031 -8.5887 33.0820 REMARK 3 T TENSOR REMARK 3 T11: 0.1524 T22: 0.4826 REMARK 3 T33: 0.3402 T12: 0.1886 REMARK 3 T13: 0.0518 T23: 0.1362 REMARK 3 L TENSOR REMARK 3 L11: 1.0152 L22: 0.9584 REMARK 3 L33: 1.5187 L12: 2.0129 REMARK 3 L13: 0.4789 L23: -0.2916 REMARK 3 S TENSOR REMARK 3 S11: 0.0617 S12: -0.1110 S13: 0.0682 REMARK 3 S21: 0.2622 S22: 0.1414 S23: -0.1061 REMARK 3 S31: 0.0507 S32: -0.0887 S33: -0.0638 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 112:209 REMARK 3 ORIGIN FOR THE GROUP (A): 30.6270 4.9032 32.6248 REMARK 3 T TENSOR REMARK 3 T11: 0.2970 T22: 0.6644 REMARK 3 T33: 0.2231 T12: 0.2689 REMARK 3 T13: 0.0737 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 1.6599 L22: 2.3628 REMARK 3 L33: 2.9361 L12: 0.3193 REMARK 3 L13: -1.2059 L23: -0.3482 REMARK 3 S TENSOR REMARK 3 S11: 0.4202 S12: -0.6714 S13: 0.0271 REMARK 3 S21: 0.1900 S22: -0.0647 S23: -0.1654 REMARK 3 S31: -0.2475 S32: 0.1575 S33: -0.1464 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 1:111 OR RESID 210:329) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5359 4.0365 14.8986 REMARK 3 T TENSOR REMARK 3 T11: 0.0545 T22: 0.4672 REMARK 3 T33: 0.2168 T12: 0.0560 REMARK 3 T13: -0.0346 T23: 0.1463 REMARK 3 L TENSOR REMARK 3 L11: 0.1760 L22: 2.3668 REMARK 3 L33: 2.5023 L12: 0.8003 REMARK 3 L13: -0.2175 L23: 0.2454 REMARK 3 S TENSOR REMARK 3 S11: -0.1118 S12: 0.0352 S13: 0.2391 REMARK 3 S21: -0.0509 S22: 0.2854 S23: 0.1061 REMARK 3 S31: -0.1046 S32: -0.3511 S33: -0.2042 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QE7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063532. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99294 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18225 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.781 REMARK 200 RESOLUTION RANGE LOW (A) : 41.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.78300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 400, 100MM MES-NAOH, 300MM REMARK 280 LI2SO4, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.98333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 167.96667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 83.98333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 167.96667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 83.98333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 167.96667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 83.98333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 167.96667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 83.98333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ARG A 3 REMARK 465 VAL A 411 REMARK 465 LEU A 412 REMARK 465 ARG A 413 REMARK 465 PRO A 414 REMARK 465 GLU A 415 REMARK 465 GLU A 416 REMARK 465 VAL A 417 REMARK 465 VAL A 418 REMARK 465 LEU A 419 REMARK 465 ASP A 420 REMARK 465 ALA A 421 REMARK 465 GLU A 422 REMARK 465 ASP A 423 REMARK 465 ALA A 424 REMARK 465 ASP A 425 REMARK 465 ILE A 426 REMARK 465 THR A 427 REMARK 465 ASP A 428 REMARK 465 LYS A 429 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 260 N GLY A 262 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 5 110.14 163.46 REMARK 500 GLU A 150 122.84 -34.57 REMARK 500 PHE A 179 -50.39 -130.30 REMARK 500 ILE A 208 -48.81 -165.43 REMARK 500 ARG A 259 -74.83 -96.69 REMARK 500 ASP A 260 -169.17 -68.49 REMARK 500 PRO A 261 -71.65 18.11 REMARK 500 CYS A 318 87.81 -177.09 REMARK 500 VAL A 319 75.46 61.75 REMARK 500 ALA A 380 89.90 70.28 REMARK 500 LEU A 389 97.35 59.82 REMARK 500 LYS A 390 -147.01 -126.50 REMARK 500 LYS A 407 32.33 -79.49 REMARK 500 LEU A 408 66.17 -113.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 260 PRO A 261 -144.89 REMARK 500 REMARK 500 REMARK: NULL DBREF 3QE7 A 1 429 UNP P0AGM7 URAA_ECOLI 1 429 SEQRES 1 A 429 MET THR ARG ARG ALA ILE GLY VAL SER GLU ARG PRO PRO SEQRES 2 A 429 LEU LEU GLN THR ILE PRO LEU SER LEU GLN HIS LEU PHE SEQRES 3 A 429 ALA MET PHE GLY ALA THR VAL LEU VAL PRO VAL LEU PHE SEQRES 4 A 429 HIS ILE ASN PRO ALA THR VAL LEU LEU PHE ASN GLY ILE SEQRES 5 A 429 GLY THR LEU LEU TYR LEU PHE ILE CYS LYS GLY LYS ILE SEQRES 6 A 429 PRO ALA TYR LEU GLY SER SER PHE ALA PHE ILE SER PRO SEQRES 7 A 429 VAL LEU LEU LEU LEU PRO LEU GLY TYR GLU VAL ALA LEU SEQRES 8 A 429 GLY GLY PHE ILE MET CYS GLY VAL LEU PHE CYS LEU VAL SEQRES 9 A 429 SER PHE ILE VAL LYS LYS ALA GLY THR GLY TRP LEU ASP SEQRES 10 A 429 VAL LEU PHE PRO PRO ALA ALA MET GLY ALA ILE VAL ALA SEQRES 11 A 429 VAL ILE GLY LEU GLU LEU ALA GLY VAL ALA ALA GLY MET SEQRES 12 A 429 ALA GLY LEU LEU PRO ALA GLU GLY GLN THR PRO ASP SER SEQRES 13 A 429 LYS THR ILE ILE ILE SER ILE THR THR LEU ALA VAL THR SEQRES 14 A 429 VAL LEU GLY SER VAL LEU PHE ARG GLY PHE LEU ALA ILE SEQRES 15 A 429 ILE PRO ILE LEU ILE GLY VAL LEU VAL GLY TYR ALA LEU SEQRES 16 A 429 SER PHE ALA MET GLY ILE VAL ASP THR THR PRO ILE ILE SEQRES 17 A 429 ASN ALA HIS TRP PHE ALA LEU PRO THR LEU TYR THR PRO SEQRES 18 A 429 ARG PHE GLU TRP PHE ALA ILE LEU THR ILE LEU PRO ALA SEQRES 19 A 429 ALA LEU VAL VAL ILE ALA GLU HIS VAL GLY HIS LEU VAL SEQRES 20 A 429 VAL THR ALA ASN ILE VAL LYS LYS ASP LEU LEU ARG ASP SEQRES 21 A 429 PRO GLY LEU HIS ARG SER MET PHE ALA ASN GLY LEU SER SEQRES 22 A 429 THR VAL ILE SER GLY PHE PHE GLY SER THR PRO ASN THR SEQRES 23 A 429 THR TYR GLY GLU ASN ILE GLY VAL MET ALA ILE THR ARG SEQRES 24 A 429 VAL TYR SER THR TRP VAL ILE GLY GLY ALA ALA ILE PHE SEQRES 25 A 429 ALA ILE LEU LEU SER CYS VAL GLY LYS LEU ALA ALA ALA SEQRES 26 A 429 ILE GLN MET ILE PRO LEU PRO VAL MET GLY GLY VAL SER SEQRES 27 A 429 LEU LEU LEU TYR GLY VAL ILE GLY ALA SER GLY ILE ARG SEQRES 28 A 429 VAL LEU ILE GLU SER LYS VAL ASP TYR ASN LYS ALA GLN SEQRES 29 A 429 ASN LEU ILE LEU THR SER VAL ILE LEU ILE ILE GLY VAL SEQRES 30 A 429 SER GLY ALA LYS VAL ASN ILE GLY ALA ALA GLU LEU LYS SEQRES 31 A 429 GLY MET ALA LEU ALA THR ILE VAL GLY ILE GLY LEU SER SEQRES 32 A 429 LEU ILE PHE LYS LEU ILE SER VAL LEU ARG PRO GLU GLU SEQRES 33 A 429 VAL VAL LEU ASP ALA GLU ASP ALA ASP ILE THR ASP LYS HET URA A 430 8 HET BNG A 431 21 HETNAM URA URACIL HETNAM BNG NONYL BETA-D-GLUCOPYRANOSIDE HETSYN BNG BETA-NONYLGLUCOSIDE; NONYL BETA-D-GLUCOSIDE; NONYL D- HETSYN 2 BNG GLUCOSIDE; NONYL GLUCOSIDE FORMUL 2 URA C4 H4 N2 O2 FORMUL 3 BNG C15 H30 O6 HELIX 1 1 PRO A 13 LEU A 38 1 26 HELIX 2 2 ASN A 42 CYS A 61 1 20 HELIX 3 3 PHE A 75 LEU A 83 1 9 HELIX 4 4 GLY A 86 LYS A 110 1 25 HELIX 5 5 THR A 113 PHE A 120 1 8 HELIX 6 6 PRO A 121 ALA A 144 1 24 HELIX 7 7 ASP A 155 LEU A 175 1 21 HELIX 8 8 ILE A 182 VAL A 202 1 21 HELIX 9 9 THR A 205 ALA A 210 1 6 HELIX 10 10 GLU A 224 LEU A 232 1 9 HELIX 11 11 LEU A 232 LYS A 254 1 23 HELIX 12 12 GLY A 262 GLY A 281 1 20 HELIX 13 13 TYR A 288 ARG A 299 1 12 HELIX 14 14 SER A 302 SER A 317 1 16 HELIX 15 15 VAL A 319 GLN A 327 1 9 HELIX 16 16 PRO A 330 SER A 356 1 27 HELIX 17 17 LYS A 362 GLY A 379 1 18 HELIX 18 18 LYS A 390 LYS A 407 1 18 SHEET 1 A 2 LEU A 69 SER A 71 0 SHEET 2 A 2 ASN A 285 THR A 287 -1 O THR A 286 N GLY A 70 CISPEP 1 PHE A 39 HIS A 40 0 -5.34 CISPEP 2 GLU A 150 GLY A 151 0 2.49 CISPEP 3 CYS A 318 VAL A 319 0 -17.88 CISPEP 4 GLY A 379 ALA A 380 0 2.11 CISPEP 5 ILE A 384 GLY A 385 0 0.78 CISPEP 6 GLY A 385 ALA A 386 0 3.05 CISPEP 7 ALA A 386 ALA A 387 0 6.37 CRYST1 96.760 96.760 251.950 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010335 0.005967 0.000000 0.00000 SCALE2 0.000000 0.011934 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003969 0.00000