HEADER TRANSPORT PROTEIN 20-JAN-11 3QEL TITLE CRYSTAL STRUCTURE OF AMINO TERMINAL DOMAINS OF THE NMDA RECEPTOR TITLE 2 SUBUNIT GLUN1 AND GLUN2B IN COMPLEX WITH IFENPRODIL CAVEAT 3QEL FUC E 6 HAS WRONG CHIRALITY AT ATOM C1 NAG B 501 HAS WRONG CAVEAT 2 3QEL CHIRALITY AT ATOM C1 NAG B 502 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 3QEL C1 QEL B 1 HAS WRONG CHIRALITY AT ATOM C14 NAG C 502 HAS CAVEAT 4 3QEL WRONG CHIRALITY AT ATOM C1 NAG D 501 HAS WRONG CHIRALITY AT CAVEAT 5 3QEL ATOM C1 NAG D 502 HAS WRONG CHIRALITY AT ATOM C1 QEL D 2 CAVEAT 6 3QEL HAS WRONG CHIRALITY AT ATOM C14 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NMDA GLUTAMATE RECEPTOR SUBUNIT; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: AMINO TERMINAL DOMAIN, RESIDUES 23-405; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GLUTAMATE [NMDA] RECEPTOR SUBUNIT EPSILON-2; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: AMINO TERMINAL DOMAIN, RESIDUES 31-394; COMPND 11 SYNONYM: N-METHYL D-ASPARTATE RECEPTOR SUBTYPE 2B, NMDAR2B, NR2B; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 GENE: GRIN1, NR1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 12 ORGANISM_COMMON: RAT; SOURCE 13 ORGANISM_TAXID: 10116; SOURCE 14 GENE: GRIN2B; SOURCE 15 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 16 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS ION CHANNEL, NMDA RECEPTOR, ALLOSTERIC MODULATION, KEYWDS 2 PHENYLETHANOLAMINE, N-GLYCOSYLATION, EXTRACELLULAR, TRANSMEMBRANE, KEYWDS 3 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.KARAKAS,N.SIMOROWSKI,H.FURUKAWA REVDAT 5 13-SEP-23 3QEL 1 REMARK HETSYN REVDAT 4 29-JUL-20 3QEL 1 CAVEAT COMPND REMARK SEQADV REVDAT 4 2 1 HETNAM LINK SITE ATOM REVDAT 3 12-OCT-11 3QEL 1 LINK REVDAT 2 20-JUL-11 3QEL 1 JRNL REVDAT 1 15-JUN-11 3QEL 0 JRNL AUTH E.KARAKAS,N.SIMOROWSKI,H.FURUKAWA JRNL TITL SUBUNIT ARRANGEMENT AND PHENYLETHANOLAMINE BINDING IN JRNL TITL 2 GLUN1/GLUN2B NMDA RECEPTORS. JRNL REF NATURE V. 475 249 2011 JRNL REFN ISSN 0028-0836 JRNL PMID 21677647 JRNL DOI 10.1038/NATURE10180 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 59854 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3051 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9846 - 7.2524 0.96 2841 152 0.1933 0.2052 REMARK 3 2 7.2524 - 5.7699 0.97 2769 156 0.2123 0.2516 REMARK 3 3 5.7699 - 5.0444 0.98 2742 166 0.1776 0.2321 REMARK 3 4 5.0444 - 4.5850 0.98 2782 158 0.1353 0.1867 REMARK 3 5 4.5850 - 4.2573 0.98 2799 122 0.1335 0.1504 REMARK 3 6 4.2573 - 4.0070 0.98 2769 141 0.1452 0.2066 REMARK 3 7 4.0070 - 3.8067 0.98 2691 170 0.1561 0.2052 REMARK 3 8 3.8067 - 3.6413 0.98 2776 163 0.1715 0.2278 REMARK 3 9 3.6413 - 3.5013 0.98 2731 130 0.1822 0.2523 REMARK 3 10 3.5013 - 3.3807 0.97 2705 144 0.1890 0.2611 REMARK 3 11 3.3807 - 3.2751 0.96 2677 152 0.2045 0.2403 REMARK 3 12 3.2751 - 3.1816 0.95 2666 126 0.2043 0.2783 REMARK 3 13 3.1816 - 3.0979 0.93 2624 116 0.1988 0.2699 REMARK 3 14 3.0979 - 3.0224 0.93 2572 150 0.2213 0.2898 REMARK 3 15 3.0224 - 2.9538 0.91 2546 156 0.2385 0.3183 REMARK 3 16 2.9538 - 2.8909 0.90 2480 128 0.2494 0.2924 REMARK 3 17 2.8909 - 2.8332 0.88 2444 149 0.2561 0.3255 REMARK 3 18 2.8332 - 2.7797 0.85 2364 110 0.2536 0.3175 REMARK 3 19 2.7797 - 2.7301 0.84 2377 121 0.2854 0.3414 REMARK 3 20 2.7301 - 2.6839 0.81 2246 107 0.2811 0.4145 REMARK 3 21 2.6839 - 2.6406 0.78 2117 135 0.2823 0.3565 REMARK 3 22 2.6406 - 2.6000 0.73 2085 99 0.2808 0.3260 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 50.06 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.26110 REMARK 3 B22 (A**2) : 15.47450 REMARK 3 B33 (A**2) : -8.21340 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -9.95170 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 10870 REMARK 3 ANGLE : 1.134 14835 REMARK 3 CHIRALITY : 0.072 1768 REMARK 3 PLANARITY : 0.004 1880 REMARK 3 DIHEDRAL : 15.784 3769 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 85.5560 6.7972 -53.0625 REMARK 3 T TENSOR REMARK 3 T11: 0.2600 T22: 0.1776 REMARK 3 T33: 0.2908 T12: -0.0240 REMARK 3 T13: 0.0133 T23: -0.0276 REMARK 3 L TENSOR REMARK 3 L11: 0.8059 L22: 0.4796 REMARK 3 L33: 1.8209 L12: -0.2634 REMARK 3 L13: 0.4773 L23: -0.0327 REMARK 3 S TENSOR REMARK 3 S11: -0.0522 S12: -0.0416 S13: 0.0551 REMARK 3 S21: -0.0076 S22: -0.0491 S23: 0.0488 REMARK 3 S31: -0.1159 S32: -0.0414 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 81.3899 15.1826 -21.2092 REMARK 3 T TENSOR REMARK 3 T11: 0.3494 T22: 0.3567 REMARK 3 T33: 0.2527 T12: 0.0532 REMARK 3 T13: 0.0152 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.8503 L22: 1.4231 REMARK 3 L33: 1.4876 L12: 0.2009 REMARK 3 L13: 0.2824 L23: 0.2607 REMARK 3 S TENSOR REMARK 3 S11: -0.1579 S12: -0.1867 S13: 0.0487 REMARK 3 S21: 0.1571 S22: 0.1012 S23: 0.0336 REMARK 3 S31: -0.2439 S32: -0.1876 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 22.6335 -1.8055 -11.4271 REMARK 3 T TENSOR REMARK 3 T11: 0.4959 T22: 0.4309 REMARK 3 T33: 0.5136 T12: 0.0758 REMARK 3 T13: -0.0054 T23: 0.2293 REMARK 3 L TENSOR REMARK 3 L11: 1.2225 L22: 0.5275 REMARK 3 L33: 1.1072 L12: 0.5686 REMARK 3 L13: 0.5673 L23: 0.2080 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: 0.2024 S13: 0.0181 REMARK 3 S21: 0.1831 S22: 0.0640 S23: 0.1408 REMARK 3 S31: 0.0418 S32: 0.1682 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 25.1914 3.2417 -43.9746 REMARK 3 T TENSOR REMARK 3 T11: 0.3887 T22: 0.7114 REMARK 3 T33: 0.4629 T12: 0.0066 REMARK 3 T13: 0.0022 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.5391 L22: 0.5892 REMARK 3 L33: 1.0387 L12: -0.0905 REMARK 3 L13: 0.1241 L23: -0.3792 REMARK 3 S TENSOR REMARK 3 S11: -0.0682 S12: 0.2377 S13: -0.0948 REMARK 3 S21: -0.1280 S22: 0.1712 S23: 0.0328 REMARK 3 S31: -0.0695 S32: 0.0926 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QEL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063546. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JAN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64034 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.51000 REMARK 200 R SYM (I) : 0.51000 REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3JPW, 3QEK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.0-3.5M NAFORMATE, 0.1 M HEPES PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 133.99650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.43450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 133.99650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.43450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 97 REMARK 465 PRO A 98 REMARK 465 THR A 99 REMARK 465 ASP A 100 REMARK 465 HIS A 101 REMARK 465 GLY A 186 REMARK 465 LYS A 187 REMARK 465 GLU A 188 REMARK 465 SER A 189 REMARK 465 LYS A 190 REMARK 465 SER A 191 REMARK 465 LYS A 192 REMARK 465 LYS A 193 REMARK 465 ARG A 194 REMARK 465 ASN A 195 REMARK 465 TYR A 196 REMARK 465 GLU A 197 REMARK 465 ASN A 198 REMARK 465 LEU A 199 REMARK 465 ASP A 200 REMARK 465 GLN A 201 REMARK 465 LEU A 202 REMARK 465 SER A 203 REMARK 465 TYR A 204 REMARK 465 ASP A 205 REMARK 465 ASN A 206 REMARK 465 LYS A 207 REMARK 465 ARG A 208 REMARK 465 SER B 31 REMARK 465 ALA B 53 REMARK 465 HIS B 54 REMARK 465 GLU B 55 REMARK 465 LYS B 56 REMARK 465 ASP B 57 REMARK 465 ASP B 58 REMARK 465 PHE B 59 REMARK 465 HIS B 60 REMARK 465 HIS B 61 REMARK 465 MET B 394 REMARK 465 ASP C 23 REMARK 465 ARG C 56 REMARK 465 PRO C 96 REMARK 465 ALA C 97 REMARK 465 PRO C 98 REMARK 465 THR C 99 REMARK 465 ASP C 100 REMARK 465 HIS C 101 REMARK 465 GLY C 186 REMARK 465 LYS C 187 REMARK 465 GLU C 188 REMARK 465 SER C 189 REMARK 465 LYS C 190 REMARK 465 SER C 191 REMARK 465 LYS C 192 REMARK 465 LYS C 193 REMARK 465 ARG C 194 REMARK 465 ASN C 195 REMARK 465 TYR C 196 REMARK 465 GLU C 197 REMARK 465 ASN C 198 REMARK 465 LEU C 199 REMARK 465 ASP C 200 REMARK 465 GLN C 201 REMARK 465 LEU C 202 REMARK 465 SER C 203 REMARK 465 TYR C 204 REMARK 465 ASP C 205 REMARK 465 ASN C 206 REMARK 465 LYS C 207 REMARK 465 ARG C 208 REMARK 465 GLY C 405 REMARK 465 SER D 31 REMARK 465 PRO D 32 REMARK 465 ASP D 52 REMARK 465 ALA D 53 REMARK 465 HIS D 54 REMARK 465 GLU D 55 REMARK 465 LYS D 56 REMARK 465 ASP D 57 REMARK 465 ASP D 58 REMARK 465 THR D 302 REMARK 465 THR D 324 REMARK 465 HIS D 325 REMARK 465 GLU D 326 REMARK 465 GLY D 346 REMARK 465 ARG D 347 REMARK 465 LYS D 380 REMARK 465 ASP D 381 REMARK 465 LYS D 382 REMARK 465 SER D 383 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 23 CG OD1 OD2 REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 LYS A 37 CG CD CE NZ REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 LEU A 102 CG CD1 CD2 REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 214 CG CD CE NZ REMARK 470 GLN A 217 CG CD OE1 NE2 REMARK 470 LYS A 223 CG CD CE NZ REMARK 470 ASN A 224 CG OD1 ND2 REMARK 470 THR A 226 OG1 CG2 REMARK 470 LEU A 230 CG CD1 CD2 REMARK 470 GLU A 231 CG CD OE1 OE2 REMARK 470 GLU A 234 CG CD OE1 OE2 REMARK 470 LEU A 235 CG CD1 CD2 REMARK 470 ARG A 238 CG CD NE CZ NH1 NH2 REMARK 470 MET A 258 CG SD CE REMARK 470 ARG A 281 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 318 CG CD OE1 OE2 REMARK 470 GLU A 320 CG CD OE1 OE2 REMARK 470 ARG A 327 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 337 CG CD CE NZ REMARK 470 LYS A 350 CG CD CE NZ REMARK 470 ASP A 353 CG OD1 OD2 REMARK 470 GLU A 363 CG CD OE1 OE2 REMARK 470 ASN A 379 CG OD1 ND2 REMARK 470 LYS A 381 CG CD CE NZ REMARK 470 ARG A 398 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 399 CG CD CE NZ REMARK 470 SER B 34 OG REMARK 470 THR B 44 OG1 CG2 REMARK 470 SER B 45 OG REMARK 470 ASP B 46 CG OD1 OD2 REMARK 470 GLU B 47 CG CD OE1 OE2 REMARK 470 VAL B 48 CG1 CG2 REMARK 470 ILE B 50 CG1 CG2 CD1 REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 ASP B 52 CG OD1 OD2 REMARK 470 SER B 63 OG REMARK 470 ARG B 67 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 69 CG CD OE1 OE2 REMARK 470 VAL B 71 CG1 CG2 REMARK 470 ARG B 84 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 88 CG CD1 CD2 REMARK 470 ASP B 91 CG OD1 OD2 REMARK 470 LYS B 93 CG CD CE NZ REMARK 470 ILE B 94 CG1 CG2 CD1 REMARK 470 GLU B 139 CG CD OE1 OE2 REMARK 470 GLU B 151 CG CD OE1 OE2 REMARK 470 GLU B 162 CG CD OE1 OE2 REMARK 470 GLU B 191 CG CD OE1 OE2 REMARK 470 SER B 193 OG REMARK 470 PHE B 194 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 SER B 214 OG REMARK 470 LYS B 215 CG CD CE NZ REMARK 470 LYS B 221 CG CD CE NZ REMARK 470 LYS B 222 CG CD CE NZ REMARK 470 SER B 281 OG REMARK 470 ASP B 283 CG OD1 OD2 REMARK 470 GLU B 284 CG CD OE1 OE2 REMARK 470 TRP B 285 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 285 CZ3 CH2 REMARK 470 ASP B 286 CG OD1 OD2 REMARK 470 LEU B 308 CG CD1 CD2 REMARK 470 SER B 312 OG REMARK 470 SER B 319 OG REMARK 470 TYR B 322 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN B 323 CG OD1 ND2 REMARK 470 LYS B 327 CG CD CE NZ REMARK 470 ARG B 328 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 329 CG1 CG2 CD1 REMARK 470 THR B 343 OG1 CG2 REMARK 470 GLU B 345 CG CD OE1 OE2 REMARK 470 ARG B 347 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 349 CG CD1 CD2 REMARK 470 GLU B 353 CG CD OE1 OE2 REMARK 470 LYS B 361 CG CD CE NZ REMARK 470 VAL B 363 CG1 CG2 REMARK 470 LYS B 369 CG CD CE NZ REMARK 470 GLU B 370 CG CD OE1 OE2 REMARK 470 LYS B 372 CG CD CE NZ REMARK 470 ARG B 375 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 378 CD CE NZ REMARK 470 LYS B 380 CG CD CE NZ REMARK 470 ASP B 381 CG OD1 OD2 REMARK 470 LYS B 382 CG CD CE NZ REMARK 470 SER B 383 OG REMARK 470 GLN B 385 CG CD OE1 NE2 REMARK 470 LYS C 25 CG CD CE NZ REMARK 470 LYS C 36 CG CD CE NZ REMARK 470 LYS C 37 CG CD CE NZ REMARK 470 GLN C 40 CG CD OE1 NE2 REMARK 470 ARG C 43 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 44 CG CD OE1 OE2 REMARK 470 ASN C 47 CG OD1 ND2 REMARK 470 LYS C 51 CG CD CE NZ REMARK 470 PHE C 54 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR C 55 OG1 CG2 REMARK 470 LYS C 57 CG CD CE NZ REMARK 470 ILE C 72 CG1 CG2 CD1 REMARK 470 LEU C 102 CG CD1 CD2 REMARK 470 ILE C 127 CG1 CG2 CD1 REMARK 470 LYS C 178 CG CD CE NZ REMARK 470 LYS C 179 CG CD CE NZ REMARK 470 GLU C 185 CG CD OE1 OE2 REMARK 470 LYS C 211 CG CD CE NZ REMARK 470 LYS C 214 CG CD CE NZ REMARK 470 LYS C 223 CG CD CE NZ REMARK 470 ASN C 224 CG OD1 ND2 REMARK 470 THR C 226 OG1 CG2 REMARK 470 LEU C 230 CG CD1 CD2 REMARK 470 GLU C 231 CG CD OE1 OE2 REMARK 470 LYS C 233 CG CD CE NZ REMARK 470 GLU C 234 CG CD OE1 OE2 REMARK 470 ARG C 238 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 246 CG CD OE1 OE2 REMARK 470 MET C 258 CG SD CE REMARK 470 THR C 262 OG1 CG2 REMARK 470 GLU C 315 CG CD OE1 OE2 REMARK 470 GLU C 318 CG CD OE1 OE2 REMARK 470 GLU C 320 CG CD OE1 OE2 REMARK 470 ARG C 327 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 337 CG CD CE NZ REMARK 470 LYS C 350 CG CD CE NZ REMARK 470 ASP C 353 CG OD1 OD2 REMARK 470 ARG C 358 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 360 CG CD OE1 OE2 REMARK 470 GLU C 363 CG CD OE1 OE2 REMARK 470 ASN C 379 CG OD1 ND2 REMARK 470 LYS C 381 CG CD CE NZ REMARK 470 ILE C 387 CG1 CG2 CD1 REMARK 470 SER C 391 OG REMARK 470 TYR C 392 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG C 398 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 399 CG CD CE NZ REMARK 470 THR D 44 OG1 CG2 REMARK 470 SER D 45 OG REMARK 470 GLU D 47 CG CD OE1 OE2 REMARK 470 VAL D 48 CG1 CG2 REMARK 470 LYS D 51 CG CD CE NZ REMARK 470 HIS D 60 CG ND1 CD2 CE1 NE2 REMARK 470 LEU D 62 CG CD1 CD2 REMARK 470 ARG D 67 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 69 CG CD OE1 OE2 REMARK 470 LEU D 88 CG CD1 CD2 REMARK 470 ARG D 92 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 93 CG CD CE NZ REMARK 470 GLN D 95 CG CD OE1 NE2 REMARK 470 ILE D 133 CG1 CG2 CD1 REMARK 470 GLU D 139 CG CD OE1 OE2 REMARK 470 GLU D 151 CG CD OE1 OE2 REMARK 470 GLU D 162 CG CD OE1 OE2 REMARK 470 GLU D 191 CG CD OE1 OE2 REMARK 470 SER D 193 OG REMARK 470 PHE D 194 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL D 195 CG1 CG2 REMARK 470 GLU D 198 CG CD OE1 OE2 REMARK 470 SER D 214 OG REMARK 470 LYS D 215 CG CD CE NZ REMARK 470 LYS D 221 CG CD CE NZ REMARK 470 LYS D 222 CG CD CE NZ REMARK 470 GLU D 235 CG CD OE1 OE2 REMARK 470 ASN D 245 CG OD1 ND2 REMARK 470 SER D 281 OG REMARK 470 GLU D 284 CG CD OE1 OE2 REMARK 470 TRP D 285 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 285 CZ3 CH2 REMARK 470 ASP D 286 CG OD1 OD2 REMARK 470 ARG D 294 CG CD NE CZ NH1 NH2 REMARK 470 ILE D 299 CG1 CG2 CD1 REMARK 470 GLU D 310 CG CD OE1 OE2 REMARK 470 SER D 312 OG REMARK 470 LYS D 318 CG CD CE NZ REMARK 470 SER D 319 OG REMARK 470 SER D 320 OG REMARK 470 TYR D 322 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS D 327 CG CD CE NZ REMARK 470 ARG D 328 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 337 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 353 CG CD OE1 OE2 REMARK 470 LYS D 361 CG CD CE NZ REMARK 470 VAL D 363 CG1 CG2 REMARK 470 LYS D 369 CG CD CE NZ REMARK 470 GLU D 370 CG CD OE1 OE2 REMARK 470 LYS D 372 CG CD CE NZ REMARK 470 GLU D 374 CG CD OE1 OE2 REMARK 470 ARG D 375 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 378 CD CE NZ REMARK 470 GLN D 385 CG CD OE1 NE2 REMARK 470 TYR D 389 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL D 390 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 82 -63.71 -107.14 REMARK 500 PRO A 95 -175.48 -59.36 REMARK 500 ASP A 353 59.28 -101.05 REMARK 500 ARG A 380 19.27 59.37 REMARK 500 SER A 391 -12.85 -151.19 REMARK 500 LYS B 51 39.13 -67.09 REMARK 500 ASP B 91 -61.27 -92.35 REMARK 500 HIS B 127 130.83 -171.60 REMARK 500 THR B 174 -165.58 -102.90 REMARK 500 ASN B 192 31.31 -98.46 REMARK 500 PHE B 194 39.67 -86.35 REMARK 500 CYS B 232 -175.69 -173.34 REMARK 500 ASP B 283 71.44 -67.87 REMARK 500 GLU B 310 -1.98 -142.69 REMARK 500 PRO B 317 108.50 -51.64 REMARK 500 LYS B 327 -5.27 -55.31 REMARK 500 ASN B 333 0.96 -68.30 REMARK 500 LEU B 349 35.02 -95.57 REMARK 500 LYS B 380 -91.23 -105.32 REMARK 500 LYS B 382 12.81 52.64 REMARK 500 THR C 63 113.50 -165.03 REMARK 500 GLN C 86 72.14 50.23 REMARK 500 THR C 122 -5.37 -143.56 REMARK 500 ILE C 127 -32.50 -39.63 REMARK 500 SER C 136 50.42 -91.56 REMARK 500 MET C 319 178.96 -59.82 REMARK 500 ASP C 353 32.99 -79.03 REMARK 500 ASN C 379 -105.59 65.03 REMARK 500 SER C 391 -36.59 -141.15 REMARK 500 ASN C 396 -169.53 -109.30 REMARK 500 LEU D 62 -178.70 -66.56 REMARK 500 SER D 90 32.52 -83.13 REMARK 500 ASP D 91 -114.20 -133.25 REMARK 500 ILE D 133 126.52 -38.94 REMARK 500 ASP D 211 66.17 -115.81 REMARK 500 LYS D 221 -9.47 -59.79 REMARK 500 CYS D 232 -176.27 -174.99 REMARK 500 LYS D 318 103.01 -46.30 REMARK 500 CYS D 321 44.64 -108.84 REMARK 500 ILE D 329 -2.48 -58.94 REMARK 500 PHE D 344 -74.99 -111.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 NAG C 502 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 137 O REMARK 620 2 ASP A 364 O 125.7 REMARK 620 3 HOH A 440 O 125.4 108.2 REMARK 620 4 HOH A 441 O 92.5 71.7 96.4 REMARK 620 5 HOH A 458 O 84.7 122.9 72.4 163.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE C 137 O REMARK 620 2 ASP C 364 O 129.1 REMARK 620 3 HOH C 423 O 125.3 101.7 REMARK 620 4 HOH C 424 O 86.9 73.7 89.7 REMARK 620 5 HOH C 425 O 115.0 72.5 96.7 146.2 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3JPW RELATED DB: PDB REMARK 900 STRUCTURE OF GLUN2B ATD REMARK 900 RELATED ID: 3QEK RELATED DB: PDB REMARK 900 STRUCTURE OF GLUN1B ATD REMARK 900 RELATED ID: 3QEM RELATED DB: PDB DBREF 3QEL A 23 405 UNP Q91977 Q91977_XENLA 23 405 DBREF 3QEL B 31 394 UNP Q00960 NMDE2_RAT 31 394 DBREF 3QEL C 23 405 UNP Q91977 Q91977_XENLA 23 405 DBREF 3QEL D 31 394 UNP Q00960 NMDE2_RAT 31 394 SEQADV 3QEL GLN A 61 UNP Q91977 ASN 61 ENGINEERED MUTATION SEQADV 3QEL GLN A 371 UNP Q91977 ASN 371 ENGINEERED MUTATION SEQADV 3QEL ASP B 348 UNP Q00960 ASN 348 ENGINEERED MUTATION SEQADV 3QEL GLN C 61 UNP Q91977 ASN 61 ENGINEERED MUTATION SEQADV 3QEL GLN C 371 UNP Q91977 ASN 371 ENGINEERED MUTATION SEQADV 3QEL ASP D 348 UNP Q00960 ASN 348 ENGINEERED MUTATION SEQRES 1 A 383 ASP PRO LYS ILE VAL ASN ILE GLY ALA VAL LEU SER THR SEQRES 2 A 383 LYS LYS HIS GLU GLN ILE PHE ARG GLU ALA VAL ASN GLN SEQRES 3 A 383 ALA ASN LYS ARG HIS PHE THR ARG LYS ILE GLN LEU GLN SEQRES 4 A 383 ALA THR SER VAL THR HIS ARG PRO ASN ALA ILE GLN MET SEQRES 5 A 383 ALA LEU SER VAL CYS GLU ASP LEU ILE SER SER GLN VAL SEQRES 6 A 383 TYR ALA ILE LEU VAL SER HIS PRO PRO ALA PRO THR ASP SEQRES 7 A 383 HIS LEU THR PRO THR PRO ILE SER TYR THR ALA GLY PHE SEQRES 8 A 383 TYR ARG ILE PRO VAL ILE GLY LEU THR THR ARG MET SER SEQRES 9 A 383 ILE TYR SER ASP LYS SER ILE HIS LEU SER PHE LEU ARG SEQRES 10 A 383 THR VAL PRO PRO TYR SER HIS GLN ALA LEU VAL TRP PHE SEQRES 11 A 383 GLU MET MET ARG LEU PHE ASN TRP ASN HIS VAL ILE LEU SEQRES 12 A 383 ILE VAL SER ASP ASP HIS GLU GLY ARG ALA ALA GLN LYS SEQRES 13 A 383 LYS LEU GLU THR LEU LEU GLU GLY LYS GLU SER LYS SER SEQRES 14 A 383 LYS LYS ARG ASN TYR GLU ASN LEU ASP GLN LEU SER TYR SEQRES 15 A 383 ASP ASN LYS ARG GLY PRO LYS ALA ASP LYS VAL LEU GLN SEQRES 16 A 383 PHE GLU PRO GLY THR LYS ASN LEU THR ALA LEU LEU LEU SEQRES 17 A 383 GLU ALA LYS GLU LEU GLU ALA ARG VAL ILE ILE LEU SER SEQRES 18 A 383 ALA SER GLU ASP ASP ALA THR ALA VAL TYR LYS SER ALA SEQRES 19 A 383 ALA MET LEU ASP MET THR GLY ALA GLY TYR VAL TRP LEU SEQRES 20 A 383 VAL GLY GLU ARG GLU ILE SER GLY SER ALA LEU ARG TYR SEQRES 21 A 383 ALA PRO ASP GLY ILE ILE GLY LEU GLN LEU ILE ASN GLY SEQRES 22 A 383 LYS ASN GLU SER ALA HIS ILE SER ASP ALA VAL ALA VAL SEQRES 23 A 383 VAL ALA GLN ALA ILE HIS GLU LEU PHE GLU MET GLU ASN SEQRES 24 A 383 ILE THR ASP PRO PRO ARG GLY CYS VAL GLY ASN THR ASN SEQRES 25 A 383 ILE TRP LYS THR GLY PRO LEU PHE LYS ARG VAL LEU MET SEQRES 26 A 383 SER SER LYS TYR PRO ASP GLY VAL THR GLY ARG ILE GLU SEQRES 27 A 383 PHE ASN GLU ASP GLY ASP ARG LYS PHE ALA GLN TYR SER SEQRES 28 A 383 ILE MET ASN LEU GLN ASN ARG LYS LEU VAL GLN VAL GLY SEQRES 29 A 383 ILE PHE ASN GLY SER TYR ILE ILE GLN ASN ASP ARG LYS SEQRES 30 A 383 ILE ILE TRP PRO GLY GLY SEQRES 1 B 364 SER PRO PRO SER ILE GLY ILE ALA VAL ILE LEU VAL GLY SEQRES 2 B 364 THR SER ASP GLU VAL ALA ILE LYS ASP ALA HIS GLU LYS SEQRES 3 B 364 ASP ASP PHE HIS HIS LEU SER VAL VAL PRO ARG VAL GLU SEQRES 4 B 364 LEU VAL ALA MET ASN GLU THR ASP PRO LYS SER ILE ILE SEQRES 5 B 364 THR ARG ILE CYS ASP LEU MET SER ASP ARG LYS ILE GLN SEQRES 6 B 364 GLY VAL VAL PHE ALA ASP ASP THR ASP GLN GLU ALA ILE SEQRES 7 B 364 ALA GLN ILE LEU ASP PHE ILE SER ALA GLN THR LEU THR SEQRES 8 B 364 PRO ILE LEU GLY ILE HIS GLY GLY SER SER MET ILE MET SEQRES 9 B 364 ALA ASP LYS ASP GLU SER SER MET PHE PHE GLN PHE GLY SEQRES 10 B 364 PRO SER ILE GLU GLN GLN ALA SER VAL MET LEU ASN ILE SEQRES 11 B 364 MET GLU GLU TYR ASP TRP TYR ILE PHE SER ILE VAL THR SEQRES 12 B 364 THR TYR PHE PRO GLY TYR GLN ASP PHE VAL ASN LYS ILE SEQRES 13 B 364 ARG SER THR ILE GLU ASN SER PHE VAL GLY TRP GLU LEU SEQRES 14 B 364 GLU GLU VAL LEU LEU LEU ASP MET SER LEU ASP ASP GLY SEQRES 15 B 364 ASP SER LYS ILE GLN ASN GLN LEU LYS LYS LEU GLN SER SEQRES 16 B 364 PRO ILE ILE LEU LEU TYR CYS THR LYS GLU GLU ALA THR SEQRES 17 B 364 TYR ILE PHE GLU VAL ALA ASN SER VAL GLY LEU THR GLY SEQRES 18 B 364 TYR GLY TYR THR TRP ILE VAL PRO SER LEU VAL ALA GLY SEQRES 19 B 364 ASP THR ASP THR VAL PRO SER GLU PHE PRO THR GLY LEU SEQRES 20 B 364 ILE SER VAL SER TYR ASP GLU TRP ASP TYR GLY LEU PRO SEQRES 21 B 364 ALA ARG VAL ARG ASP GLY ILE ALA ILE ILE THR THR ALA SEQRES 22 B 364 ALA SER ASP MET LEU SER GLU HIS SER PHE ILE PRO GLU SEQRES 23 B 364 PRO LYS SER SER CYS TYR ASN THR HIS GLU LYS ARG ILE SEQRES 24 B 364 TYR GLN SER ASN MET LEU ASN ARG TYR LEU ILE ASN VAL SEQRES 25 B 364 THR PHE GLU GLY ARG ASP LEU SER PHE SER GLU ASP GLY SEQRES 26 B 364 TYR GLN MET HIS PRO LYS LEU VAL ILE ILE LEU LEU ASN SEQRES 27 B 364 LYS GLU ARG LYS TRP GLU ARG VAL GLY LYS TRP LYS ASP SEQRES 28 B 364 LYS SER LEU GLN MET LYS TYR TYR VAL TRP PRO ARG MET SEQRES 1 C 383 ASP PRO LYS ILE VAL ASN ILE GLY ALA VAL LEU SER THR SEQRES 2 C 383 LYS LYS HIS GLU GLN ILE PHE ARG GLU ALA VAL ASN GLN SEQRES 3 C 383 ALA ASN LYS ARG HIS PHE THR ARG LYS ILE GLN LEU GLN SEQRES 4 C 383 ALA THR SER VAL THR HIS ARG PRO ASN ALA ILE GLN MET SEQRES 5 C 383 ALA LEU SER VAL CYS GLU ASP LEU ILE SER SER GLN VAL SEQRES 6 C 383 TYR ALA ILE LEU VAL SER HIS PRO PRO ALA PRO THR ASP SEQRES 7 C 383 HIS LEU THR PRO THR PRO ILE SER TYR THR ALA GLY PHE SEQRES 8 C 383 TYR ARG ILE PRO VAL ILE GLY LEU THR THR ARG MET SER SEQRES 9 C 383 ILE TYR SER ASP LYS SER ILE HIS LEU SER PHE LEU ARG SEQRES 10 C 383 THR VAL PRO PRO TYR SER HIS GLN ALA LEU VAL TRP PHE SEQRES 11 C 383 GLU MET MET ARG LEU PHE ASN TRP ASN HIS VAL ILE LEU SEQRES 12 C 383 ILE VAL SER ASP ASP HIS GLU GLY ARG ALA ALA GLN LYS SEQRES 13 C 383 LYS LEU GLU THR LEU LEU GLU GLY LYS GLU SER LYS SER SEQRES 14 C 383 LYS LYS ARG ASN TYR GLU ASN LEU ASP GLN LEU SER TYR SEQRES 15 C 383 ASP ASN LYS ARG GLY PRO LYS ALA ASP LYS VAL LEU GLN SEQRES 16 C 383 PHE GLU PRO GLY THR LYS ASN LEU THR ALA LEU LEU LEU SEQRES 17 C 383 GLU ALA LYS GLU LEU GLU ALA ARG VAL ILE ILE LEU SER SEQRES 18 C 383 ALA SER GLU ASP ASP ALA THR ALA VAL TYR LYS SER ALA SEQRES 19 C 383 ALA MET LEU ASP MET THR GLY ALA GLY TYR VAL TRP LEU SEQRES 20 C 383 VAL GLY GLU ARG GLU ILE SER GLY SER ALA LEU ARG TYR SEQRES 21 C 383 ALA PRO ASP GLY ILE ILE GLY LEU GLN LEU ILE ASN GLY SEQRES 22 C 383 LYS ASN GLU SER ALA HIS ILE SER ASP ALA VAL ALA VAL SEQRES 23 C 383 VAL ALA GLN ALA ILE HIS GLU LEU PHE GLU MET GLU ASN SEQRES 24 C 383 ILE THR ASP PRO PRO ARG GLY CYS VAL GLY ASN THR ASN SEQRES 25 C 383 ILE TRP LYS THR GLY PRO LEU PHE LYS ARG VAL LEU MET SEQRES 26 C 383 SER SER LYS TYR PRO ASP GLY VAL THR GLY ARG ILE GLU SEQRES 27 C 383 PHE ASN GLU ASP GLY ASP ARG LYS PHE ALA GLN TYR SER SEQRES 28 C 383 ILE MET ASN LEU GLN ASN ARG LYS LEU VAL GLN VAL GLY SEQRES 29 C 383 ILE PHE ASN GLY SER TYR ILE ILE GLN ASN ASP ARG LYS SEQRES 30 C 383 ILE ILE TRP PRO GLY GLY SEQRES 1 D 364 SER PRO PRO SER ILE GLY ILE ALA VAL ILE LEU VAL GLY SEQRES 2 D 364 THR SER ASP GLU VAL ALA ILE LYS ASP ALA HIS GLU LYS SEQRES 3 D 364 ASP ASP PHE HIS HIS LEU SER VAL VAL PRO ARG VAL GLU SEQRES 4 D 364 LEU VAL ALA MET ASN GLU THR ASP PRO LYS SER ILE ILE SEQRES 5 D 364 THR ARG ILE CYS ASP LEU MET SER ASP ARG LYS ILE GLN SEQRES 6 D 364 GLY VAL VAL PHE ALA ASP ASP THR ASP GLN GLU ALA ILE SEQRES 7 D 364 ALA GLN ILE LEU ASP PHE ILE SER ALA GLN THR LEU THR SEQRES 8 D 364 PRO ILE LEU GLY ILE HIS GLY GLY SER SER MET ILE MET SEQRES 9 D 364 ALA ASP LYS ASP GLU SER SER MET PHE PHE GLN PHE GLY SEQRES 10 D 364 PRO SER ILE GLU GLN GLN ALA SER VAL MET LEU ASN ILE SEQRES 11 D 364 MET GLU GLU TYR ASP TRP TYR ILE PHE SER ILE VAL THR SEQRES 12 D 364 THR TYR PHE PRO GLY TYR GLN ASP PHE VAL ASN LYS ILE SEQRES 13 D 364 ARG SER THR ILE GLU ASN SER PHE VAL GLY TRP GLU LEU SEQRES 14 D 364 GLU GLU VAL LEU LEU LEU ASP MET SER LEU ASP ASP GLY SEQRES 15 D 364 ASP SER LYS ILE GLN ASN GLN LEU LYS LYS LEU GLN SER SEQRES 16 D 364 PRO ILE ILE LEU LEU TYR CYS THR LYS GLU GLU ALA THR SEQRES 17 D 364 TYR ILE PHE GLU VAL ALA ASN SER VAL GLY LEU THR GLY SEQRES 18 D 364 TYR GLY TYR THR TRP ILE VAL PRO SER LEU VAL ALA GLY SEQRES 19 D 364 ASP THR ASP THR VAL PRO SER GLU PHE PRO THR GLY LEU SEQRES 20 D 364 ILE SER VAL SER TYR ASP GLU TRP ASP TYR GLY LEU PRO SEQRES 21 D 364 ALA ARG VAL ARG ASP GLY ILE ALA ILE ILE THR THR ALA SEQRES 22 D 364 ALA SER ASP MET LEU SER GLU HIS SER PHE ILE PRO GLU SEQRES 23 D 364 PRO LYS SER SER CYS TYR ASN THR HIS GLU LYS ARG ILE SEQRES 24 D 364 TYR GLN SER ASN MET LEU ASN ARG TYR LEU ILE ASN VAL SEQRES 25 D 364 THR PHE GLU GLY ARG ASP LEU SER PHE SER GLU ASP GLY SEQRES 26 D 364 TYR GLN MET HIS PRO LYS LEU VAL ILE ILE LEU LEU ASN SEQRES 27 D 364 LYS GLU ARG LYS TRP GLU ARG VAL GLY LYS TRP LYS ASP SEQRES 28 D 364 LYS SER LEU GLN MET LYS TYR TYR VAL TRP PRO ARG MET MODRES 3QEL ASN A 297 ASN GLYCOSYLATION SITE MODRES 3QEL ASN A 389 ASN GLYCOSYLATION SITE MODRES 3QEL ASN D 341 ASN GLYCOSYLATION SITE MODRES 3QEL ASN B 341 ASN GLYCOSYLATION SITE MODRES 3QEL ASN D 74 ASN GLYCOSYLATION SITE MODRES 3QEL ASN C 297 ASN GLYCOSYLATION SITE MODRES 3QEL ASN B 74 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET FUC E 6 10 HET NA A 501 1 HET NAG A 502 14 HET NAG B 501 14 HET NAG B 502 14 HET QEL B 1 24 HET NA C 501 1 HET NAG C 502 14 HET NAG D 501 14 HET NAG D 502 14 HET QEL D 2 24 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM NA SODIUM ION HETNAM QEL 4-[(1R,2S)-2-(4-BENZYLPIPERIDIN-1-YL)-1- HETNAM 2 QEL HYDROXYPROPYL]PHENOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN QEL IFENPRODIL FORMUL 5 NAG 8(C8 H15 N O6) FORMUL 5 BMA C6 H12 O6 FORMUL 5 MAN 2(C6 H12 O6) FORMUL 5 FUC C6 H12 O5 FORMUL 6 NA 2(NA 1+) FORMUL 10 QEL 2(C21 H27 N O2) FORMUL 16 HOH *137(H2 O) HELIX 1 1 THR A 35 HIS A 53 1 19 HELIX 2 2 ASN A 70 LEU A 82 1 13 HELIX 3 3 ILE A 83 SER A 85 5 3 HELIX 4 4 PRO A 104 TYR A 114 1 11 HELIX 5 5 MET A 125 ASP A 130 5 6 HELIX 6 6 PRO A 143 SER A 145 5 3 HELIX 7 7 HIS A 146 PHE A 158 1 13 HELIX 8 8 ASP A 170 GLU A 185 1 16 HELIX 9 9 LEU A 225 GLU A 234 1 10 HELIX 10 10 SER A 245 LEU A 259 1 15 HELIX 11 11 GLU A 272 SER A 276 5 5 HELIX 12 12 GLY A 277 TYR A 282 1 6 HELIX 13 13 ASN A 297 PHE A 317 1 21 HELIX 14 14 THR A 338 SER A 348 1 11 HELIX 15 15 ASP B 46 LYS B 51 1 6 HELIX 16 16 ASP B 77 ARG B 92 1 16 HELIX 17 17 GLU B 106 LEU B 120 1 15 HELIX 18 18 GLY B 128 MET B 132 5 5 HELIX 19 19 SER B 149 TYR B 164 1 16 HELIX 20 20 GLY B 178 ASN B 192 1 15 HELIX 21 21 SER B 214 LYS B 221 1 8 HELIX 22 22 THR B 233 SER B 246 1 14 HELIX 23 23 PRO B 259 GLY B 264 1 6 HELIX 24 24 GLY B 288 SER B 309 1 22 HELIX 25 25 GLU B 326 GLN B 331 5 6 HELIX 26 26 LEU B 335 ILE B 340 1 6 HELIX 27 27 THR C 35 HIS C 53 1 19 HELIX 28 28 ASN C 70 LEU C 82 1 13 HELIX 29 29 ILE C 83 SER C 85 5 3 HELIX 30 30 PRO C 104 TYR C 114 1 11 HELIX 31 31 MET C 125 ASP C 130 5 6 HELIX 32 32 PRO C 143 HIS C 146 5 4 HELIX 33 33 GLN C 147 PHE C 158 1 12 HELIX 34 34 ASP C 170 LEU C 184 1 15 HELIX 35 35 LEU C 225 LEU C 235 1 11 HELIX 36 36 SER C 245 LEU C 259 1 15 HELIX 37 37 GLU C 272 SER C 276 5 5 HELIX 38 38 GLY C 277 ALA C 283 1 7 HELIX 39 39 ASN C 297 PHE C 317 1 21 HELIX 40 40 THR C 338 SER C 348 1 11 HELIX 41 41 ASP D 46 LYS D 51 1 6 HELIX 42 42 ASP D 77 SER D 90 1 14 HELIX 43 43 GLU D 106 LEU D 120 1 15 HELIX 44 44 GLY D 128 MET D 132 5 5 HELIX 45 45 SER D 149 TYR D 164 1 16 HELIX 46 46 GLY D 178 SER D 193 1 16 HELIX 47 47 SER D 214 LYS D 221 1 8 HELIX 48 48 THR D 233 VAL D 247 1 15 HELIX 49 49 PRO D 259 GLY D 264 1 6 HELIX 50 50 GLY D 288 THR D 301 1 14 HELIX 51 51 ALA D 303 SER D 312 1 10 HELIX 52 52 LEU D 335 ILE D 340 1 6 SHEET 1 A 5 ILE A 58 THR A 66 0 SHEET 2 A 5 LYS A 25 LEU A 33 1 N VAL A 27 O GLN A 59 SHEET 3 A 5 VAL A 87 VAL A 92 1 O ALA A 89 N GLY A 30 SHEET 4 A 5 VAL A 118 GLY A 120 1 O ILE A 119 N VAL A 92 SHEET 5 A 5 PHE A 137 ARG A 139 1 O LEU A 138 N VAL A 118 SHEET 1 B 4 LYS A 211 PHE A 218 0 SHEET 2 B 4 HIS A 162 SER A 168 1 N LEU A 165 O LEU A 216 SHEET 3 B 4 VAL A 239 SER A 243 1 O ILE A 241 N ILE A 166 SHEET 4 B 4 VAL A 267 LEU A 269 1 O VAL A 267 N ILE A 240 SHEET 1 C 4 ILE A 288 LEU A 292 0 SHEET 2 C 4 TYR A 372 GLN A 378 -1 O SER A 373 N GLN A 291 SHEET 3 C 4 LYS A 381 PHE A 388 -1 O GLY A 386 N ILE A 374 SHEET 4 C 4 ILE A 393 GLN A 395 -1 O ILE A 394 N ILE A 387 SHEET 1 D 3 LYS A 350 GLY A 354 0 SHEET 2 D 3 GLY A 357 PHE A 361 -1 O ILE A 359 N TYR A 351 SHEET 3 D 3 ARG A 367 LYS A 368 -1 O LYS A 368 N GLU A 360 SHEET 1 E 5 VAL B 65 MET B 73 0 SHEET 2 E 5 SER B 34 VAL B 42 1 N VAL B 39 O VAL B 71 SHEET 3 E 5 ILE B 94 ASP B 101 1 O GLN B 95 N GLY B 36 SHEET 4 E 5 ILE B 123 HIS B 127 1 O HIS B 127 N ASP B 101 SHEET 5 E 5 PHE B 143 GLN B 145 1 O PHE B 144 N GLY B 125 SHEET 1 F 8 GLU B 198 LEU B 205 0 SHEET 2 F 8 ILE B 168 THR B 174 1 N ILE B 171 O LEU B 203 SHEET 3 F 8 ILE B 227 TYR B 231 1 O TYR B 231 N VAL B 172 SHEET 4 F 8 THR B 255 VAL B 258 1 O THR B 255 N ILE B 228 SHEET 5 F 8 ILE B 278 SER B 279 1 O ILE B 278 N TRP B 256 SHEET 6 F 8 LEU B 362 LEU B 367 -1 O ILE B 365 N SER B 279 SHEET 7 F 8 TRP B 373 TRP B 379 -1 O VAL B 376 N ILE B 364 SHEET 8 F 8 LEU B 384 MET B 386 -1 O GLN B 385 N LYS B 378 SHEET 1 G 2 THR B 343 PHE B 344 0 SHEET 2 G 2 ARG B 347 ASP B 348 -1 O ARG B 347 N PHE B 344 SHEET 1 H 5 ILE C 58 THR C 66 0 SHEET 2 H 5 LYS C 25 LEU C 33 1 N LYS C 25 O GLN C 59 SHEET 3 H 5 VAL C 87 VAL C 92 1 O ALA C 89 N GLY C 30 SHEET 4 H 5 VAL C 118 GLY C 120 1 O ILE C 119 N VAL C 92 SHEET 5 H 5 PHE C 137 ARG C 139 1 O LEU C 138 N VAL C 118 SHEET 1 I 4 LYS C 211 PHE C 218 0 SHEET 2 I 4 HIS C 162 SER C 168 1 N VAL C 167 O LEU C 216 SHEET 3 I 4 VAL C 239 SER C 243 1 O ILE C 241 N ILE C 166 SHEET 4 I 4 VAL C 267 VAL C 270 1 O VAL C 267 N ILE C 240 SHEET 1 J 4 ILE C 288 LEU C 292 0 SHEET 2 J 4 TYR C 372 GLN C 378 -1 O SER C 373 N GLN C 291 SHEET 3 J 4 LYS C 381 PHE C 388 -1 O GLY C 386 N ILE C 374 SHEET 4 J 4 ILE C 393 GLN C 395 -1 O ILE C 394 N ILE C 387 SHEET 1 K 3 TYR C 351 GLY C 354 0 SHEET 2 K 3 GLY C 357 PHE C 361 -1 O ILE C 359 N TYR C 351 SHEET 3 K 3 ARG C 367 LYS C 368 -1 O LYS C 368 N GLU C 360 SHEET 1 L 5 VAL D 65 MET D 73 0 SHEET 2 L 5 SER D 34 VAL D 42 1 N VAL D 39 O VAL D 71 SHEET 3 L 5 ILE D 94 ALA D 100 1 O VAL D 98 N ALA D 38 SHEET 4 L 5 ILE D 123 HIS D 127 1 O LEU D 124 N PHE D 99 SHEET 5 L 5 PHE D 143 GLN D 145 1 O PHE D 144 N GLY D 125 SHEET 1 M 8 GLU D 198 LEU D 205 0 SHEET 2 M 8 ILE D 168 THR D 174 1 N PHE D 169 O GLU D 200 SHEET 3 M 8 ILE D 227 TYR D 231 1 O LEU D 229 N VAL D 172 SHEET 4 M 8 THR D 255 VAL D 258 1 O THR D 255 N ILE D 228 SHEET 5 M 8 ILE D 278 TYR D 282 1 O ILE D 278 N VAL D 258 SHEET 6 M 8 LEU D 362 LEU D 367 -1 O ILE D 365 N SER D 279 SHEET 7 M 8 TRP D 373 TRP D 379 -1 O TRP D 379 N LEU D 362 SHEET 8 M 8 GLN D 385 MET D 386 -1 O GLN D 385 N LYS D 378 SSBOND 1 CYS A 79 CYS A 329 1555 1555 2.08 SSBOND 2 CYS B 86 CYS B 321 1555 1555 2.05 SSBOND 3 CYS C 79 CYS C 329 1555 1555 2.05 SSBOND 4 CYS D 86 CYS D 321 1555 1555 2.05 LINK ND2 ASN A 297 C1 NAG A 502 1555 1555 1.44 LINK ND2 ASN A 389 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 74 C1 NAG B 501 1555 1555 1.44 LINK ND2 ASN B 341 C1 NAG B 502 1555 1555 1.44 LINK ND2 ASN C 297 C1 NAG C 502 1555 1555 1.44 LINK ND2 ASN D 74 C1 NAG D 501 1555 1555 1.44 LINK ND2 ASN D 341 C1 NAG D 502 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O3 NAG E 1 C1 FUC E 6 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.44 LINK O6 BMA E 3 C1 MAN E 5 1555 1555 1.44 LINK O PHE A 137 NA NA A 501 1555 1555 2.06 LINK O ASP A 364 NA NA A 501 1555 1555 2.36 LINK O HOH A 440 NA NA A 501 1555 1555 2.40 LINK O HOH A 441 NA NA A 501 1555 1555 2.64 LINK O HOH A 458 NA NA A 501 1555 1555 3.09 LINK O PHE C 137 NA NA C 501 1555 1555 2.08 LINK O ASP C 364 NA NA C 501 1555 1555 2.43 LINK O HOH C 423 NA NA C 501 1555 1555 2.29 LINK O HOH C 424 NA NA C 501 1555 1555 2.45 LINK O HOH C 425 NA NA C 501 1555 1555 2.90 CRYST1 267.993 60.869 144.923 90.00 116.49 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003731 0.000000 0.001860 0.00000 SCALE2 0.000000 0.016429 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007710 0.00000