HEADER HYDROLASE 10-FEB-11 3QOK TITLE CRYSTAL STRUCTURE OF PUTATIVE CHITINASE II FROM KLEBSIELLA PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE CHITINASE II; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 272620; SOURCE 4 STRAIN: MGH 78578; SOURCE 5 GENE: KPN78578_11730, KPN_01201; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, GLYCOSYL HYDROLASES FAMILY 18, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.MICHALSKA,H.LI,J.BEARDEN,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 06-DEC-23 3QOK 1 REMARK REVDAT 3 13-SEP-23 3QOK 1 REMARK SEQADV REVDAT 2 17-JUL-19 3QOK 1 REMARK LINK REVDAT 1 23-MAR-11 3QOK 0 JRNL AUTH K.MICHALSKA,H.LI,J.BEARDEN,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE CHITINASE II FROM KLEBSIELLA JRNL TITL 2 PNEUMONIAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 17287 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 872 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1178 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.2950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3059 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.65000 REMARK 3 B22 (A**2) : 0.84000 REMARK 3 B33 (A**2) : 0.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.419 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.244 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.170 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.238 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3152 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2103 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4284 ; 1.357 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5132 ; 0.897 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 393 ; 5.724 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 146 ;35.894 ;25.068 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 493 ;15.425 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;18.799 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 456 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3555 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 627 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1957 ; 0.489 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 802 ; 0.094 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3123 ; 0.967 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1195 ; 1.740 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1161 ; 2.789 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 53 REMARK 3 ORIGIN FOR THE GROUP (A): 24.8197 22.6467 33.2314 REMARK 3 T TENSOR REMARK 3 T11: 0.1257 T22: 0.1702 REMARK 3 T33: 0.0862 T12: -0.0503 REMARK 3 T13: 0.0016 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 11.7500 L22: 9.4222 REMARK 3 L33: 10.4755 L12: 0.0058 REMARK 3 L13: 4.1020 L23: 3.0639 REMARK 3 S TENSOR REMARK 3 S11: 0.2719 S12: -0.3508 S13: -0.4209 REMARK 3 S21: 0.2929 S22: 0.0596 S23: -0.5659 REMARK 3 S31: 0.9741 S32: -0.0102 S33: -0.3315 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 54 A 218 REMARK 3 ORIGIN FOR THE GROUP (A): 26.8749 38.1129 40.8146 REMARK 3 T TENSOR REMARK 3 T11: 0.0835 T22: 0.0670 REMARK 3 T33: 0.0823 T12: -0.0284 REMARK 3 T13: -0.0236 T23: 0.0568 REMARK 3 L TENSOR REMARK 3 L11: 3.8157 L22: 2.2032 REMARK 3 L33: 1.7858 L12: 0.6151 REMARK 3 L13: 0.8376 L23: 0.9064 REMARK 3 S TENSOR REMARK 3 S11: -0.0523 S12: 0.1997 S13: 0.4126 REMARK 3 S21: -0.0969 S22: 0.0664 S23: 0.0119 REMARK 3 S31: -0.0939 S32: 0.0855 S33: -0.0141 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 219 A 415 REMARK 3 ORIGIN FOR THE GROUP (A): 7.4505 20.1860 44.0366 REMARK 3 T TENSOR REMARK 3 T11: 0.0293 T22: 0.0825 REMARK 3 T33: 0.0600 T12: -0.0218 REMARK 3 T13: -0.0356 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.7216 L22: 1.8230 REMARK 3 L33: 2.4083 L12: -0.1352 REMARK 3 L13: -0.4515 L23: -0.8371 REMARK 3 S TENSOR REMARK 3 S11: -0.0739 S12: 0.0427 S13: 0.0969 REMARK 3 S21: 0.0441 S22: 0.0298 S23: -0.0118 REMARK 3 S31: -0.0341 S32: 0.0100 S33: 0.0441 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3QOK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000063905. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979477 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17383 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.63300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR-SAD REMARK 200 SOFTWARE USED: AUTO-RICKSHAW (MOLREP, PHASER, MLPHARE, PIRATE, REMARK 200 CNS, REFMAC, RESOLVE, BUCCANEER REMARK 200 STARTING MODEL: 1ITX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NACL, 0.1 M NA2HPO4/KH2PO4, 10% REMARK 280 PEG8K, PH 6.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.24050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.24050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.17050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.33600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.17050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.33600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.24050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 46.17050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.33600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.24050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 46.17050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.33600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE AUTHOR STATES THAT THE BIOLOGICAL UNIT OF THIS PROTEIN REMARK 300 IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 LYS A 2 REMARK 465 ARG A 3 REMARK 465 LEU A 4 REMARK 465 PRO A 5 REMARK 465 LEU A 6 REMARK 465 LEU A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 LEU A 10 REMARK 465 PRO A 11 REMARK 465 LEU A 12 REMARK 465 LEU A 13 REMARK 465 CYS A 14 REMARK 465 ALA A 15 REMARK 465 SER A 16 REMARK 465 ALA A 17 REMARK 465 LEU A 18 REMARK 465 SER A 19 REMARK 465 ALA A 20 REMARK 465 GLN A 21 REMARK 465 LYS A 416 REMARK 465 HIS A 417 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 37 -76.35 -67.32 REMARK 500 HIS A 80 -6.16 76.08 REMARK 500 VAL A 156 -56.57 74.76 REMARK 500 SER A 203 2.10 -152.11 REMARK 500 SER A 233 39.88 -152.21 REMARK 500 PHE A 275 50.13 -90.30 REMARK 500 LEU A 335 -63.00 -96.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 420 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC100107 RELATED DB: TARGETDB DBREF 3QOK A 1 417 UNP A6T7R3 A6T7R3_KLEP7 1 417 SEQADV 3QOK SER A -2 UNP A6T7R3 EXPRESSION TAG SEQADV 3QOK ASN A -1 UNP A6T7R3 EXPRESSION TAG SEQADV 3QOK ALA A 0 UNP A6T7R3 EXPRESSION TAG SEQRES 1 A 420 SER ASN ALA MSE LYS ARG LEU PRO LEU LEU ALA ALA LEU SEQRES 2 A 420 PRO LEU LEU CYS ALA SER ALA LEU SER ALA GLN PRO LEU SEQRES 3 A 420 MSE SER VAL GLY TYR PHE ASN GLY GLY GLY ASP VAL THR SEQRES 4 A 420 ALA GLY PRO GLY GLY ASP ILE ASP LYS LEU ASP VAL ARG SEQRES 5 A 420 GLN ILE THR HIS LEU ASN TYR SER PHE GLY LEU ILE TYR SEQRES 6 A 420 ASN ASP GLU LYS ASP GLU THR ASN ALA ALA LEU LYS ASP SEQRES 7 A 420 PRO ALA HIS LEU HIS GLU ILE TRP LEU SER PRO LYS VAL SEQRES 8 A 420 GLN ALA ASP LEU GLN LYS LEU PRO ALA LEU ARG LYS GLN SEQRES 9 A 420 ASN PRO ASP LEU LYS VAL LEU LEU SER VAL GLY GLY TRP SEQRES 10 A 420 GLY ALA ARG GLY PHE SER GLY ALA ALA ALA THR ALA GLU SEQRES 11 A 420 SER ARG ALA VAL PHE ILE ARG SER ALA GLN LYS ILE ILE SEQRES 12 A 420 GLN GLN TYR GLY LEU ASP GLY ILE ASP LEU ASP TRP GLU SEQRES 13 A 420 PHE PRO VAL ASN GLY ALA TRP GLY LEU VAL ALA SER GLN SEQRES 14 A 420 PRO ALA ASP ARG ASP ASN PHE THR ALA LEU LEU LYS SER SEQRES 15 A 420 LEU ARG GLU ALA VAL GLY GLU GLN LYS LEU VAL THR ILE SEQRES 16 A 420 ALA VAL GLY ALA ASN ALA GLU SER PRO LYS SER TRP VAL SEQRES 17 A 420 ASP VAL LYS ALA VAL ALA PRO VAL LEU ASN TYR ILE ASN SEQRES 18 A 420 LEU MSE THR TYR ASP MSE ALA TYR GLY THR GLN TYR PHE SEQRES 19 A 420 ASN SER ASN LEU TYR ASP SER SER HIS TRP PRO THR VAL SEQRES 20 A 420 ALA ALA ALA ASP LYS TYR SER ALA ASP PHE VAL VAL ASN SEQRES 21 A 420 ASN TYR LEU ALA ALA GLY LEU LYS PRO SER GLN MSE ASN SEQRES 22 A 420 LEU GLY ILE GLY PHE TYR GLY ARG VAL PRO LYS ARG ALA SEQRES 23 A 420 VAL GLU PRO GLY ILE ASP TRP THR LYS ALA ASP ALA GLN SEQRES 24 A 420 ASN ASN PRO VAL THR GLN PRO TYR PHE GLY PRO GLN GLN SEQRES 25 A 420 ILE ALA LEU PHE ALA SER LEU GLY TYR ASP LEU SER LYS SEQRES 26 A 420 ASP THR TYR VAL LYS TYR ASN ASP ILE VAL GLY LYS LEU SEQRES 27 A 420 LEU ASN ASP PRO GLN LYS ARG PHE THR GLU HIS TRP ASP SEQRES 28 A 420 ASP GLU ALA LYS VAL PRO TRP LEU SER VAL GLN SER ALA SEQRES 29 A 420 GLU GLY LYS PRO LEU PHE ALA LEU SER TYR GLU ASN PRO SEQRES 30 A 420 ARG SER VAL ALA ILE LYS ALA ASP TYR ILE LYS ALA LYS SEQRES 31 A 420 GLY LEU ALA GLY ALA MSE PHE TRP GLU TYR GLY ALA ASP SEQRES 32 A 420 ASP GLN ASN GLN LEU ALA ARG GLN LEU ALA GLU SER LEU SEQRES 33 A 420 GLY ILE LYS HIS MODRES 3QOK MSE A 24 MET SELENOMETHIONINE MODRES 3QOK MSE A 220 MET SELENOMETHIONINE MODRES 3QOK MSE A 224 MET SELENOMETHIONINE MODRES 3QOK MSE A 269 MET SELENOMETHIONINE MODRES 3QOK MSE A 393 MET SELENOMETHIONINE HET MSE A 24 8 HET MSE A 220 8 HET MSE A 224 8 HET MSE A 269 8 HET MSE A 393 8 HET GOL A 418 6 HET GOL A 419 6 HET GOL A 420 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 HOH *25(H2 O) HELIX 1 1 ASP A 42 LEU A 46 5 5 HELIX 2 2 ASN A 70 LEU A 79 5 10 HELIX 3 3 SER A 85 GLN A 93 1 9 HELIX 4 4 LYS A 94 ASN A 102 1 9 HELIX 5 5 GLY A 118 ALA A 123 1 6 HELIX 6 6 THR A 125 GLY A 144 1 20 HELIX 7 7 ASN A 157 LEU A 162 1 6 HELIX 8 8 ALA A 168 GLY A 185 1 18 HELIX 9 9 ALA A 198 TRP A 204 1 7 HELIX 10 10 ASP A 206 ALA A 211 1 6 HELIX 11 11 PRO A 212 LEU A 214 5 3 HELIX 12 12 ALA A 245 LYS A 249 5 5 HELIX 13 13 SER A 251 GLY A 263 1 13 HELIX 14 14 LYS A 265 SER A 267 5 3 HELIX 15 15 PRO A 280 VAL A 284 5 5 HELIX 16 16 ASP A 294 ASN A 298 5 5 HELIX 17 17 GLY A 306 LEU A 316 1 11 HELIX 18 18 TYR A 328 LEU A 335 1 8 HELIX 19 19 ASN A 373 GLY A 388 1 16 HELIX 20 20 GLU A 396 ASP A 400 5 5 HELIX 21 21 ASN A 403 GLY A 414 1 12 SHEET 1 A10 ILE A 82 TRP A 83 0 SHEET 2 A10 HIS A 53 ILE A 61 -1 N LEU A 60 O TRP A 83 SHEET 3 A10 LYS A 106 GLY A 112 1 O LEU A 108 N TYR A 56 SHEET 4 A10 GLY A 147 ASP A 151 1 O ASP A 151 N VAL A 111 SHEET 5 A10 LEU A 189 VAL A 194 1 O LEU A 189 N ILE A 148 SHEET 6 A10 TYR A 216 LEU A 219 1 O ASN A 218 N ILE A 192 SHEET 7 A10 MSE A 269 GLY A 274 1 O ASN A 270 N LEU A 219 SHEET 8 A10 GLY A 391 TRP A 395 1 O GLY A 391 N LEU A 271 SHEET 9 A10 MSE A 24 ASN A 30 1 N VAL A 26 O ALA A 392 SHEET 10 A10 HIS A 53 ILE A 61 1 O ASN A 55 N PHE A 29 SHEET 1 B 2 TYR A 276 ARG A 278 0 SHEET 2 B 2 TYR A 325 LYS A 327 -1 O VAL A 326 N GLY A 277 SHEET 1 C 3 PHE A 343 ASP A 348 0 SHEET 2 C 3 VAL A 353 GLN A 359 -1 O TRP A 355 N HIS A 346 SHEET 3 C 3 PRO A 365 SER A 370 -1 O ALA A 368 N LEU A 356 LINK C LEU A 23 N MSE A 24 1555 1555 1.33 LINK C MSE A 24 N SER A 25 1555 1555 1.32 LINK C LEU A 219 N MSE A 220 1555 1555 1.33 LINK C MSE A 220 N THR A 221 1555 1555 1.33 LINK C ASP A 223 N MSE A 224 1555 1555 1.33 LINK C MSE A 224 N ALA A 225 1555 1555 1.34 LINK C GLN A 268 N MSE A 269 1555 1555 1.32 LINK C MSE A 269 N ASN A 270 1555 1555 1.34 LINK C ALA A 392 N MSE A 393 1555 1555 1.32 LINK C MSE A 393 N PHE A 394 1555 1555 1.32 CISPEP 1 SER A 57 PHE A 58 0 6.36 CISPEP 2 GLU A 153 PHE A 154 0 -9.56 CISPEP 3 TRP A 395 GLU A 396 0 -3.27 SITE 1 AC1 2 HIS A 346 TRP A 347 SITE 1 AC2 5 ASP A 237 LYS A 249 TYR A 250 SER A 251 SITE 2 AC2 5 PHE A 254 SITE 1 AC3 4 ASP A 349 LYS A 352 ARG A 375 ASP A 382 CRYST1 92.341 110.672 108.481 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010829 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009036 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009218 0.00000