data_3QOY # _entry.id 3QOY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3QOY pdb_00003qoy 10.2210/pdb3qoy/pdb RCSB RCSB063919 ? ? WWPDB D_1000063919 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1AD2 'RIBOSOMAL PROTEIN L1 MUTANT WITH SERINE 179 REPLACED BY CYSTEINE' unspecified PDB 1CJS 'CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L1 FROM METHANOCOCCUS JANNASCHII' unspecified PDB 1ZHO 'The structure of a ribosomal protein L1 in complex with mRNA' unspecified PDB 1MZP 'Structure of the L1 protuberance in the ribosome' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3QOY _pdbx_database_status.recvd_initial_deposition_date 2011-02-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gabdulkhakov, A.G.' 1 'Tishchenko, S.V.' 2 'Nikonova, E.U.' 3 'Shkliaeva, A.A.' 4 'Garber, M.B.' 5 'Nikonov, S.V.' 6 'Nevskaya, N.A.' 7 # _citation.id primary _citation.title 'Crystal Structure of Ribosomal Protein L1 from the Bacterium Aquifex Aeolicus' _citation.journal_abbrev 'Crystallography Reports' _citation.journal_volume 56 _citation.page_first 603 _citation.page_last 607 _citation.year 2011 _citation.journal_id_ASTM CYSTE3 _citation.country RU _citation.journal_id_ISSN 1063-7745 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nikonova, E.Yu.' 1 ? primary 'Tishchenko, S.V.' 2 ? primary 'Gabdulkhakov, A.G.' 3 ? primary 'Shklyaeva, A.A.' 4 ? primary 'Garber, M.B.' 5 ? primary 'Nikonov, S.V.' 6 ? primary 'Nevskaya, N.A.' 7 ? # _cell.entry_id 3QOY _cell.length_a 107.490 _cell.length_b 37.520 _cell.length_c 58.970 _cell.angle_alpha 90.00 _cell.angle_beta 110.32 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3QOY _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '50S ribosomal protein L1' 26953.541 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 4 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 5 water nat water 18.015 77 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MARRGKKYIEASKLVDRNKRYTLEEAVDLLKKMEEVLQRRFDETVELAMRLNVDPRYADQMVRGSVVLPHGLGKPIKVVV FAEGEYAKKAEEAGADYVGGDELINKILKEEWTDFDVAIATPEMMPKVAKLGRILGPRGLMPSPKTGTVTTNVEQAIKDA KRGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQYIKNMAVSLTMSPSVKLDINEVLKKLQEK AA ; _entity_poly.pdbx_seq_one_letter_code_can ;MARRGKKYIEASKLVDRNKRYTLEEAVDLLKKMEEVLQRRFDETVELAMRLNVDPRYADQMVRGSVVLPHGLGKPIKVVV FAEGEYAKKAEEAGADYVGGDELINKILKEEWTDFDVAIATPEMMPKVAKLGRILGPRGLMPSPKTGTVTTNVEQAIKDA KRGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQYIKNMAVSLTMSPSVKLDINEVLKKLQEK AA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ARG n 1 4 ARG n 1 5 GLY n 1 6 LYS n 1 7 LYS n 1 8 TYR n 1 9 ILE n 1 10 GLU n 1 11 ALA n 1 12 SER n 1 13 LYS n 1 14 LEU n 1 15 VAL n 1 16 ASP n 1 17 ARG n 1 18 ASN n 1 19 LYS n 1 20 ARG n 1 21 TYR n 1 22 THR n 1 23 LEU n 1 24 GLU n 1 25 GLU n 1 26 ALA n 1 27 VAL n 1 28 ASP n 1 29 LEU n 1 30 LEU n 1 31 LYS n 1 32 LYS n 1 33 MET n 1 34 GLU n 1 35 GLU n 1 36 VAL n 1 37 LEU n 1 38 GLN n 1 39 ARG n 1 40 ARG n 1 41 PHE n 1 42 ASP n 1 43 GLU n 1 44 THR n 1 45 VAL n 1 46 GLU n 1 47 LEU n 1 48 ALA n 1 49 MET n 1 50 ARG n 1 51 LEU n 1 52 ASN n 1 53 VAL n 1 54 ASP n 1 55 PRO n 1 56 ARG n 1 57 TYR n 1 58 ALA n 1 59 ASP n 1 60 GLN n 1 61 MET n 1 62 VAL n 1 63 ARG n 1 64 GLY n 1 65 SER n 1 66 VAL n 1 67 VAL n 1 68 LEU n 1 69 PRO n 1 70 HIS n 1 71 GLY n 1 72 LEU n 1 73 GLY n 1 74 LYS n 1 75 PRO n 1 76 ILE n 1 77 LYS n 1 78 VAL n 1 79 VAL n 1 80 VAL n 1 81 PHE n 1 82 ALA n 1 83 GLU n 1 84 GLY n 1 85 GLU n 1 86 TYR n 1 87 ALA n 1 88 LYS n 1 89 LYS n 1 90 ALA n 1 91 GLU n 1 92 GLU n 1 93 ALA n 1 94 GLY n 1 95 ALA n 1 96 ASP n 1 97 TYR n 1 98 VAL n 1 99 GLY n 1 100 GLY n 1 101 ASP n 1 102 GLU n 1 103 LEU n 1 104 ILE n 1 105 ASN n 1 106 LYS n 1 107 ILE n 1 108 LEU n 1 109 LYS n 1 110 GLU n 1 111 GLU n 1 112 TRP n 1 113 THR n 1 114 ASP n 1 115 PHE n 1 116 ASP n 1 117 VAL n 1 118 ALA n 1 119 ILE n 1 120 ALA n 1 121 THR n 1 122 PRO n 1 123 GLU n 1 124 MET n 1 125 MET n 1 126 PRO n 1 127 LYS n 1 128 VAL n 1 129 ALA n 1 130 LYS n 1 131 LEU n 1 132 GLY n 1 133 ARG n 1 134 ILE n 1 135 LEU n 1 136 GLY n 1 137 PRO n 1 138 ARG n 1 139 GLY n 1 140 LEU n 1 141 MET n 1 142 PRO n 1 143 SER n 1 144 PRO n 1 145 LYS n 1 146 THR n 1 147 GLY n 1 148 THR n 1 149 VAL n 1 150 THR n 1 151 THR n 1 152 ASN n 1 153 VAL n 1 154 GLU n 1 155 GLN n 1 156 ALA n 1 157 ILE n 1 158 LYS n 1 159 ASP n 1 160 ALA n 1 161 LYS n 1 162 ARG n 1 163 GLY n 1 164 ARG n 1 165 VAL n 1 166 GLU n 1 167 PHE n 1 168 LYS n 1 169 VAL n 1 170 ASP n 1 171 LYS n 1 172 ALA n 1 173 GLY n 1 174 ASN n 1 175 VAL n 1 176 HIS n 1 177 MET n 1 178 PRO n 1 179 VAL n 1 180 GLY n 1 181 LYS n 1 182 ILE n 1 183 SER n 1 184 PHE n 1 185 GLU n 1 186 LYS n 1 187 GLU n 1 188 LYS n 1 189 LEU n 1 190 ILE n 1 191 ASP n 1 192 ASN n 1 193 LEU n 1 194 TYR n 1 195 ALA n 1 196 ALA n 1 197 ILE n 1 198 ASP n 1 199 ALA n 1 200 VAL n 1 201 VAL n 1 202 ARG n 1 203 ALA n 1 204 LYS n 1 205 PRO n 1 206 PRO n 1 207 GLY n 1 208 ALA n 1 209 LYS n 1 210 GLY n 1 211 GLN n 1 212 TYR n 1 213 ILE n 1 214 LYS n 1 215 ASN n 1 216 MET n 1 217 ALA n 1 218 VAL n 1 219 SER n 1 220 LEU n 1 221 THR n 1 222 MET n 1 223 SER n 1 224 PRO n 1 225 SER n 1 226 VAL n 1 227 LYS n 1 228 LEU n 1 229 ASP n 1 230 ILE n 1 231 ASN n 1 232 GLU n 1 233 VAL n 1 234 LEU n 1 235 LYS n 1 236 LYS n 1 237 LEU n 1 238 GLN n 1 239 GLU n 1 240 LYS n 1 241 ALA n 1 242 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'aq_1935, rplA' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aquifex aeolicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 63363 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a-PL-AaeL1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RL1_AQUAE _struct_ref.pdbx_db_accession O67759 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MARRGKKYIEASKLVDRNKRYTLEEAVDLLKKMEEVLQRRFDETVELAMRLNVDPRYADQMVRGSVVLPHGLGKPIKVVV FAEGEYAKKAEEAGADYVGGDELINKILKEEWTDFDVAIATPEMMPKVAKLGRILGPRGLMPSPKTGTVTTNVEQAIKDA KRGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQYIKNMAVSLTMSPSVKLDINEVLKKLQEK AA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3QOY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 242 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O67759 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 242 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 242 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3QOY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_percent_sol 40.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 285 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '25 % PEG4000, 100mM acetate buffer, 200mM ammonium sulphate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 285K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2011-01-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Montel 200' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54189 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'BRUKER AXS MICROSTAR' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54189 # _reflns.entry_id 3QOY _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 28.67 _reflns.d_resolution_high 2.1 _reflns.number_obs 12221 _reflns.number_all 13162 _reflns.percent_possible_obs 92.9 _reflns.pdbx_Rmerge_I_obs 0.116 _reflns.pdbx_Rsym_value 0.098 _reflns.pdbx_netI_over_sigmaI 11.94 _reflns.B_iso_Wilson_estimate 26.1 _reflns.pdbx_redundancy 3.39 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.2 _reflns_shell.percent_possible_all 83.3 _reflns_shell.Rmerge_I_obs 0.332 _reflns_shell.pdbx_Rsym_value 0.289 _reflns_shell.meanI_over_sigI_obs 2.85 _reflns_shell.pdbx_redundancy 1.36 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1693 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3QOY _refine.ls_number_reflns_obs 12219 _refine.ls_number_reflns_all 13162 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.04 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.653 _refine.ls_d_res_high 2.100 _refine.ls_percent_reflns_obs 93.16 _refine.ls_R_factor_obs 0.1967 _refine.ls_R_factor_all 0.1971 _refine.ls_R_factor_R_work 0.1937 _refine.ls_R_factor_R_free 0.2507 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.00 _refine.ls_number_reflns_R_free 611 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 2.1461 _refine.aniso_B[2][2] -3.4497 _refine.aniso_B[3][3] 1.3035 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0970 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.367 _refine.solvent_model_param_bsol 23.552 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.83 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB entry 1AD2' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.25 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1886 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 1985 _refine_hist.d_res_high 2.100 _refine_hist.d_res_low 19.653 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 1955 'X-RAY DIFFRACTION' ? f_angle_d 1.146 ? ? 2634 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.894 ? ? 777 'X-RAY DIFFRACTION' ? f_chiral_restr 0.073 ? ? 297 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 337 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.100 2.3111 2700 0.2189 88.00 0.2941 . . 142 . . 2700 . 'X-RAY DIFFRACTION' . 2.3111 2.6448 2879 0.2068 93.00 0.2826 . . 151 . . 2879 . 'X-RAY DIFFRACTION' . 2.6448 3.3296 2962 0.2013 95.00 0.2640 . . 156 . . 2962 . 'X-RAY DIFFRACTION' . 3.3296 19.6537 3067 0.1725 96.00 0.2122 . . 162 . . 3067 . 'X-RAY DIFFRACTION' # _struct.entry_id 3QOY _struct.title 'Crystal structure of ribosomal protein L1 from Aquifex aeolicus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QOY _struct_keywords.pdbx_keywords 'RIBOSOMAL PROTEIN' _struct_keywords.text ;Beta-Alpha-Beta, structural constituent of ribosome, rRNA binding, regulation of translation, translation, Ribosomal RNA, mRNA, Ribosomal Proteins, RIBOSOMAL PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 3 ? LEU A 14 ? ARG A 3 LEU A 14 1 ? 12 HELX_P HELX_P2 2 THR A 22 ? GLN A 38 ? THR A 22 GLN A 38 1 ? 17 HELX_P HELX_P3 3 TYR A 57 ? MET A 61 ? TYR A 57 MET A 61 5 ? 5 HELX_P HELX_P4 4 GLU A 83 ? ALA A 93 ? GLU A 83 ALA A 93 1 ? 11 HELX_P HELX_P5 5 GLY A 100 ? GLU A 111 ? GLY A 100 GLU A 111 1 ? 12 HELX_P HELX_P6 6 MET A 124 ? ALA A 129 ? MET A 124 ALA A 129 1 ? 6 HELX_P HELX_P7 7 LEU A 131 ? GLY A 136 ? LEU A 131 GLY A 136 1 ? 6 HELX_P HELX_P8 8 PRO A 137 ? GLY A 139 ? PRO A 137 GLY A 139 5 ? 3 HELX_P HELX_P9 9 SER A 143 ? GLY A 147 ? SER A 143 GLY A 147 5 ? 5 HELX_P HELX_P10 10 ASN A 152 ? ARG A 162 ? ASN A 152 ARG A 162 1 ? 11 HELX_P HELX_P11 11 GLU A 185 ? ALA A 203 ? GLU A 185 ALA A 203 1 ? 19 HELX_P HELX_P12 12 ASP A 229 ? LYS A 240 ? ASP A 229 LYS A 240 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 74 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 74 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 75 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 75 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 9.26 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 174 ? LYS A 181 ? ASN A 174 LYS A 181 A 2 THR A 44 ? LEU A 51 ? THR A 44 LEU A 51 A 3 ILE A 213 ? LEU A 220 ? ILE A 213 LEU A 220 A 4 VAL A 226 ? LYS A 227 ? VAL A 226 LYS A 227 B 1 ARG A 63 ? VAL A 67 ? ARG A 63 VAL A 67 B 2 ARG A 164 ? LYS A 168 ? ARG A 164 LYS A 168 C 1 TYR A 97 ? GLY A 99 ? TYR A 97 GLY A 99 C 2 VAL A 78 ? PHE A 81 ? VAL A 78 PHE A 81 C 3 VAL A 117 ? ALA A 120 ? VAL A 117 ALA A 120 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 180 ? O GLY A 180 N VAL A 45 ? N VAL A 45 A 2 3 N GLU A 46 ? N GLU A 46 O SER A 219 ? O SER A 219 A 3 4 N VAL A 218 ? N VAL A 218 O VAL A 226 ? O VAL A 226 B 1 2 N VAL A 66 ? N VAL A 66 O VAL A 165 ? O VAL A 165 C 1 2 O TYR A 97 ? O TYR A 97 N VAL A 80 ? N VAL A 80 C 2 3 N VAL A 79 ? N VAL A 79 O VAL A 117 ? O VAL A 117 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 243 ? 5 'BINDING SITE FOR RESIDUE SO4 A 243' AC2 Software A SO4 244 ? 4 'BINDING SITE FOR RESIDUE SO4 A 244' AC3 Software A TRS 245 ? 7 'BINDING SITE FOR RESIDUE TRS A 245' AC4 Software A ACY 246 ? 6 'BINDING SITE FOR RESIDUE ACY A 246' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LYS A 161 ? LYS A 161 . ? 1_545 ? 2 AC1 5 LYS A 171 ? LYS A 171 . ? 1_555 ? 3 AC1 5 ACY E . ? ACY A 246 . ? 1_555 ? 4 AC1 5 HOH F . ? HOH A 250 . ? 1_545 ? 5 AC1 5 HOH F . ? HOH A 319 . ? 1_545 ? 6 AC2 4 PRO A 75 ? PRO A 75 . ? 1_545 ? 7 AC2 4 ASP A 170 ? ASP A 170 . ? 1_555 ? 8 AC2 4 LYS A 171 ? LYS A 171 . ? 1_555 ? 9 AC2 4 HOH F . ? HOH A 307 . ? 1_555 ? 10 AC3 7 ARG A 50 ? ARG A 50 . ? 1_565 ? 11 AC3 7 PRO A 69 ? PRO A 69 . ? 1_555 ? 12 AC3 7 HIS A 70 ? HIS A 70 . ? 1_555 ? 13 AC3 7 GLY A 71 ? GLY A 71 . ? 1_555 ? 14 AC3 7 LYS A 188 ? LYS A 188 . ? 1_555 ? 15 AC3 7 LYS A 214 ? LYS A 214 . ? 1_565 ? 16 AC3 7 HOH F . ? HOH A 321 . ? 1_555 ? 17 AC4 6 ASP A 54 ? ASP A 54 . ? 1_555 ? 18 AC4 6 ARG A 56 ? ARG A 56 . ? 1_555 ? 19 AC4 6 LYS A 74 ? LYS A 74 . ? 1_545 ? 20 AC4 6 LYS A 161 ? LYS A 161 . ? 1_545 ? 21 AC4 6 ARG A 162 ? ARG A 162 . ? 1_545 ? 22 AC4 6 SO4 B . ? SO4 A 243 . ? 1_555 ? # _database_PDB_matrix.entry_id 3QOY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3QOY _atom_sites.fract_transf_matrix[1][1] 0.009303 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003446 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026652 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018084 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 TYR 21 21 21 TYR TYR A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 MET 61 61 61 MET MET A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 TYR 86 86 86 TYR TYR A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 TRP 112 112 112 TRP TRP A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 MET 124 124 124 MET MET A . n A 1 125 MET 125 125 125 MET MET A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 ARG 138 138 138 ARG ARG A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 MET 141 141 141 MET MET A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 GLN 155 155 155 GLN GLN A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 ARG 162 162 162 ARG ARG A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 PHE 167 167 167 PHE PHE A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 LYS 171 171 171 LYS LYS A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 ASN 174 174 174 ASN ASN A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 HIS 176 176 176 HIS HIS A . n A 1 177 MET 177 177 177 MET MET A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 ILE 182 182 182 ILE ILE A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 PHE 184 184 184 PHE PHE A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 LYS 186 186 186 LYS LYS A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 ASP 191 191 191 ASP ASP A . n A 1 192 ASN 192 192 192 ASN ASN A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 TYR 194 194 194 TYR TYR A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 ASP 198 198 198 ASP ASP A . n A 1 199 ALA 199 199 199 ALA ALA A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 LYS 204 204 204 LYS LYS A . n A 1 205 PRO 205 205 205 PRO PRO A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 ALA 208 208 208 ALA ALA A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 GLY 210 210 210 GLY GLY A . n A 1 211 GLN 211 211 211 GLN GLN A . n A 1 212 TYR 212 212 212 TYR TYR A . n A 1 213 ILE 213 213 213 ILE ILE A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 ASN 215 215 215 ASN ASN A . n A 1 216 MET 216 216 216 MET MET A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 SER 219 219 219 SER SER A . n A 1 220 LEU 220 220 220 LEU LEU A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 MET 222 222 222 MET MET A . n A 1 223 SER 223 223 223 SER SER A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 VAL 226 226 226 VAL VAL A . n A 1 227 LYS 227 227 227 LYS LYS A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 ASP 229 229 229 ASP ASP A . n A 1 230 ILE 230 230 230 ILE ILE A . n A 1 231 ASN 231 231 231 ASN ASN A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 VAL 233 233 233 VAL VAL A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 LYS 235 235 235 LYS LYS A . n A 1 236 LYS 236 236 236 LYS LYS A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 GLN 238 238 238 GLN GLN A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 LYS 240 240 240 LYS LYS A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 ALA 242 242 242 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 243 1 SO4 SO4 A . C 2 SO4 1 244 2 SO4 SO4 A . D 3 TRS 1 245 3 TRS TRS A . E 4 ACY 1 246 4 ACY ACY A . F 5 HOH 1 247 1 HOH HOH A . F 5 HOH 2 248 2 HOH HOH A . F 5 HOH 3 249 3 HOH HOH A . F 5 HOH 4 250 4 HOH HOH A . F 5 HOH 5 251 5 HOH HOH A . F 5 HOH 6 252 6 HOH HOH A . F 5 HOH 7 253 7 HOH HOH A . F 5 HOH 8 254 8 HOH HOH A . F 5 HOH 9 255 9 HOH HOH A . F 5 HOH 10 256 10 HOH HOH A . F 5 HOH 11 257 11 HOH HOH A . F 5 HOH 12 258 12 HOH HOH A . F 5 HOH 13 259 13 HOH HOH A . F 5 HOH 14 260 14 HOH HOH A . F 5 HOH 15 261 15 HOH HOH A . F 5 HOH 16 262 16 HOH HOH A . F 5 HOH 17 263 17 HOH HOH A . F 5 HOH 18 264 18 HOH HOH A . F 5 HOH 19 265 19 HOH HOH A . F 5 HOH 20 266 20 HOH HOH A . F 5 HOH 21 267 21 HOH HOH A . F 5 HOH 22 268 22 HOH HOH A . F 5 HOH 23 269 23 HOH HOH A . F 5 HOH 24 270 24 HOH HOH A . F 5 HOH 25 271 25 HOH HOH A . F 5 HOH 26 272 26 HOH HOH A . F 5 HOH 27 273 27 HOH HOH A . F 5 HOH 28 274 28 HOH HOH A . F 5 HOH 29 275 29 HOH HOH A . F 5 HOH 30 276 30 HOH HOH A . F 5 HOH 31 277 31 HOH HOH A . F 5 HOH 32 278 32 HOH HOH A . F 5 HOH 33 279 33 HOH HOH A . F 5 HOH 34 280 34 HOH HOH A . F 5 HOH 35 281 35 HOH HOH A . F 5 HOH 36 282 36 HOH HOH A . F 5 HOH 37 283 37 HOH HOH A . F 5 HOH 38 284 38 HOH HOH A . F 5 HOH 39 285 39 HOH HOH A . F 5 HOH 40 286 40 HOH HOH A . F 5 HOH 41 287 41 HOH HOH A . F 5 HOH 42 288 42 HOH HOH A . F 5 HOH 43 289 43 HOH HOH A . F 5 HOH 44 290 44 HOH HOH A . F 5 HOH 45 291 45 HOH HOH A . F 5 HOH 46 292 46 HOH HOH A . F 5 HOH 47 293 47 HOH HOH A . F 5 HOH 48 294 48 HOH HOH A . F 5 HOH 49 295 49 HOH HOH A . F 5 HOH 50 296 50 HOH HOH A . F 5 HOH 51 297 51 HOH HOH A . F 5 HOH 52 298 52 HOH HOH A . F 5 HOH 53 299 53 HOH HOH A . F 5 HOH 54 300 54 HOH HOH A . F 5 HOH 55 301 55 HOH HOH A . F 5 HOH 56 302 56 HOH HOH A . F 5 HOH 57 303 57 HOH HOH A . F 5 HOH 58 304 58 HOH HOH A . F 5 HOH 59 305 59 HOH HOH A . F 5 HOH 60 306 60 HOH HOH A . F 5 HOH 61 307 61 HOH HOH A . F 5 HOH 62 308 62 HOH HOH A . F 5 HOH 63 309 63 HOH HOH A . F 5 HOH 64 310 64 HOH HOH A . F 5 HOH 65 311 65 HOH HOH A . F 5 HOH 66 312 66 HOH HOH A . F 5 HOH 67 313 67 HOH HOH A . F 5 HOH 68 314 68 HOH HOH A . F 5 HOH 69 315 69 HOH HOH A . F 5 HOH 70 316 70 HOH HOH A . F 5 HOH 71 317 71 HOH HOH A . F 5 HOH 72 318 72 HOH HOH A . F 5 HOH 73 319 73 HOH HOH A . F 5 HOH 74 320 74 HOH HOH A . F 5 HOH 75 321 75 HOH HOH A . F 5 HOH 76 322 76 HOH HOH A . F 5 HOH 77 323 77 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 315 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-12-28 2 'Structure model' 1 1 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 2 ? ? -67.27 14.46 2 1 PRO A 55 ? ? -66.11 1.17 3 1 ALA A 241 ? ? -119.04 -79.76 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACY C C N N 1 ACY O O N N 2 ACY OXT O N N 3 ACY CH3 C N N 4 ACY HXT H N N 5 ACY H1 H N N 6 ACY H2 H N N 7 ACY H3 H N N 8 ALA N N N N 9 ALA CA C N S 10 ALA C C N N 11 ALA O O N N 12 ALA CB C N N 13 ALA OXT O N N 14 ALA H H N N 15 ALA H2 H N N 16 ALA HA H N N 17 ALA HB1 H N N 18 ALA HB2 H N N 19 ALA HB3 H N N 20 ALA HXT H N N 21 ARG N N N N 22 ARG CA C N S 23 ARG C C N N 24 ARG O O N N 25 ARG CB C N N 26 ARG CG C N N 27 ARG CD C N N 28 ARG NE N N N 29 ARG CZ C N N 30 ARG NH1 N N N 31 ARG NH2 N N N 32 ARG OXT O N N 33 ARG H H N N 34 ARG H2 H N N 35 ARG HA H N N 36 ARG HB2 H N N 37 ARG HB3 H N N 38 ARG HG2 H N N 39 ARG HG3 H N N 40 ARG HD2 H N N 41 ARG HD3 H N N 42 ARG HE H N N 43 ARG HH11 H N N 44 ARG HH12 H N N 45 ARG HH21 H N N 46 ARG HH22 H N N 47 ARG HXT H N N 48 ASN N N N N 49 ASN CA C N S 50 ASN C C N N 51 ASN O O N N 52 ASN CB C N N 53 ASN CG C N N 54 ASN OD1 O N N 55 ASN ND2 N N N 56 ASN OXT O N N 57 ASN H H N N 58 ASN H2 H N N 59 ASN HA H N N 60 ASN HB2 H N N 61 ASN HB3 H N N 62 ASN HD21 H N N 63 ASN HD22 H N N 64 ASN HXT H N N 65 ASP N N N N 66 ASP CA C N S 67 ASP C C N N 68 ASP O O N N 69 ASP CB C N N 70 ASP CG C N N 71 ASP OD1 O N N 72 ASP OD2 O N N 73 ASP OXT O N N 74 ASP H H N N 75 ASP H2 H N N 76 ASP HA H N N 77 ASP HB2 H N N 78 ASP HB3 H N N 79 ASP HD2 H N N 80 ASP HXT H N N 81 GLN N N N N 82 GLN CA C N S 83 GLN C C N N 84 GLN O O N N 85 GLN CB C N N 86 GLN CG C N N 87 GLN CD C N N 88 GLN OE1 O N N 89 GLN NE2 N N N 90 GLN OXT O N N 91 GLN H H N N 92 GLN H2 H N N 93 GLN HA H N N 94 GLN HB2 H N N 95 GLN HB3 H N N 96 GLN HG2 H N N 97 GLN HG3 H N N 98 GLN HE21 H N N 99 GLN HE22 H N N 100 GLN HXT H N N 101 GLU N N N N 102 GLU CA C N S 103 GLU C C N N 104 GLU O O N N 105 GLU CB C N N 106 GLU CG C N N 107 GLU CD C N N 108 GLU OE1 O N N 109 GLU OE2 O N N 110 GLU OXT O N N 111 GLU H H N N 112 GLU H2 H N N 113 GLU HA H N N 114 GLU HB2 H N N 115 GLU HB3 H N N 116 GLU HG2 H N N 117 GLU HG3 H N N 118 GLU HE2 H N N 119 GLU HXT H N N 120 GLY N N N N 121 GLY CA C N N 122 GLY C C N N 123 GLY O O N N 124 GLY OXT O N N 125 GLY H H N N 126 GLY H2 H N N 127 GLY HA2 H N N 128 GLY HA3 H N N 129 GLY HXT H N N 130 HIS N N N N 131 HIS CA C N S 132 HIS C C N N 133 HIS O O N N 134 HIS CB C N N 135 HIS CG C Y N 136 HIS ND1 N Y N 137 HIS CD2 C Y N 138 HIS CE1 C Y N 139 HIS NE2 N Y N 140 HIS OXT O N N 141 HIS H H N N 142 HIS H2 H N N 143 HIS HA H N N 144 HIS HB2 H N N 145 HIS HB3 H N N 146 HIS HD1 H N N 147 HIS HD2 H N N 148 HIS HE1 H N N 149 HIS HE2 H N N 150 HIS HXT H N N 151 HOH O O N N 152 HOH H1 H N N 153 HOH H2 H N N 154 ILE N N N N 155 ILE CA C N S 156 ILE C C N N 157 ILE O O N N 158 ILE CB C N S 159 ILE CG1 C N N 160 ILE CG2 C N N 161 ILE CD1 C N N 162 ILE OXT O N N 163 ILE H H N N 164 ILE H2 H N N 165 ILE HA H N N 166 ILE HB H N N 167 ILE HG12 H N N 168 ILE HG13 H N N 169 ILE HG21 H N N 170 ILE HG22 H N N 171 ILE HG23 H N N 172 ILE HD11 H N N 173 ILE HD12 H N N 174 ILE HD13 H N N 175 ILE HXT H N N 176 LEU N N N N 177 LEU CA C N S 178 LEU C C N N 179 LEU O O N N 180 LEU CB C N N 181 LEU CG C N N 182 LEU CD1 C N N 183 LEU CD2 C N N 184 LEU OXT O N N 185 LEU H H N N 186 LEU H2 H N N 187 LEU HA H N N 188 LEU HB2 H N N 189 LEU HB3 H N N 190 LEU HG H N N 191 LEU HD11 H N N 192 LEU HD12 H N N 193 LEU HD13 H N N 194 LEU HD21 H N N 195 LEU HD22 H N N 196 LEU HD23 H N N 197 LEU HXT H N N 198 LYS N N N N 199 LYS CA C N S 200 LYS C C N N 201 LYS O O N N 202 LYS CB C N N 203 LYS CG C N N 204 LYS CD C N N 205 LYS CE C N N 206 LYS NZ N N N 207 LYS OXT O N N 208 LYS H H N N 209 LYS H2 H N N 210 LYS HA H N N 211 LYS HB2 H N N 212 LYS HB3 H N N 213 LYS HG2 H N N 214 LYS HG3 H N N 215 LYS HD2 H N N 216 LYS HD3 H N N 217 LYS HE2 H N N 218 LYS HE3 H N N 219 LYS HZ1 H N N 220 LYS HZ2 H N N 221 LYS HZ3 H N N 222 LYS HXT H N N 223 MET N N N N 224 MET CA C N S 225 MET C C N N 226 MET O O N N 227 MET CB C N N 228 MET CG C N N 229 MET SD S N N 230 MET CE C N N 231 MET OXT O N N 232 MET H H N N 233 MET H2 H N N 234 MET HA H N N 235 MET HB2 H N N 236 MET HB3 H N N 237 MET HG2 H N N 238 MET HG3 H N N 239 MET HE1 H N N 240 MET HE2 H N N 241 MET HE3 H N N 242 MET HXT H N N 243 PHE N N N N 244 PHE CA C N S 245 PHE C C N N 246 PHE O O N N 247 PHE CB C N N 248 PHE CG C Y N 249 PHE CD1 C Y N 250 PHE CD2 C Y N 251 PHE CE1 C Y N 252 PHE CE2 C Y N 253 PHE CZ C Y N 254 PHE OXT O N N 255 PHE H H N N 256 PHE H2 H N N 257 PHE HA H N N 258 PHE HB2 H N N 259 PHE HB3 H N N 260 PHE HD1 H N N 261 PHE HD2 H N N 262 PHE HE1 H N N 263 PHE HE2 H N N 264 PHE HZ H N N 265 PHE HXT H N N 266 PRO N N N N 267 PRO CA C N S 268 PRO C C N N 269 PRO O O N N 270 PRO CB C N N 271 PRO CG C N N 272 PRO CD C N N 273 PRO OXT O N N 274 PRO H H N N 275 PRO HA H N N 276 PRO HB2 H N N 277 PRO HB3 H N N 278 PRO HG2 H N N 279 PRO HG3 H N N 280 PRO HD2 H N N 281 PRO HD3 H N N 282 PRO HXT H N N 283 SER N N N N 284 SER CA C N S 285 SER C C N N 286 SER O O N N 287 SER CB C N N 288 SER OG O N N 289 SER OXT O N N 290 SER H H N N 291 SER H2 H N N 292 SER HA H N N 293 SER HB2 H N N 294 SER HB3 H N N 295 SER HG H N N 296 SER HXT H N N 297 SO4 S S N N 298 SO4 O1 O N N 299 SO4 O2 O N N 300 SO4 O3 O N N 301 SO4 O4 O N N 302 THR N N N N 303 THR CA C N S 304 THR C C N N 305 THR O O N N 306 THR CB C N R 307 THR OG1 O N N 308 THR CG2 C N N 309 THR OXT O N N 310 THR H H N N 311 THR H2 H N N 312 THR HA H N N 313 THR HB H N N 314 THR HG1 H N N 315 THR HG21 H N N 316 THR HG22 H N N 317 THR HG23 H N N 318 THR HXT H N N 319 TRP N N N N 320 TRP CA C N S 321 TRP C C N N 322 TRP O O N N 323 TRP CB C N N 324 TRP CG C Y N 325 TRP CD1 C Y N 326 TRP CD2 C Y N 327 TRP NE1 N Y N 328 TRP CE2 C Y N 329 TRP CE3 C Y N 330 TRP CZ2 C Y N 331 TRP CZ3 C Y N 332 TRP CH2 C Y N 333 TRP OXT O N N 334 TRP H H N N 335 TRP H2 H N N 336 TRP HA H N N 337 TRP HB2 H N N 338 TRP HB3 H N N 339 TRP HD1 H N N 340 TRP HE1 H N N 341 TRP HE3 H N N 342 TRP HZ2 H N N 343 TRP HZ3 H N N 344 TRP HH2 H N N 345 TRP HXT H N N 346 TRS C C N N 347 TRS C1 C N N 348 TRS C2 C N N 349 TRS C3 C N N 350 TRS N N N N 351 TRS O1 O N N 352 TRS O2 O N N 353 TRS O3 O N N 354 TRS H11 H N N 355 TRS H12 H N N 356 TRS H21 H N N 357 TRS H22 H N N 358 TRS H31 H N N 359 TRS H32 H N N 360 TRS HN1 H N N 361 TRS HN2 H N N 362 TRS HN3 H N N 363 TRS HO1 H N N 364 TRS HO2 H N N 365 TRS HO3 H N N 366 TYR N N N N 367 TYR CA C N S 368 TYR C C N N 369 TYR O O N N 370 TYR CB C N N 371 TYR CG C Y N 372 TYR CD1 C Y N 373 TYR CD2 C Y N 374 TYR CE1 C Y N 375 TYR CE2 C Y N 376 TYR CZ C Y N 377 TYR OH O N N 378 TYR OXT O N N 379 TYR H H N N 380 TYR H2 H N N 381 TYR HA H N N 382 TYR HB2 H N N 383 TYR HB3 H N N 384 TYR HD1 H N N 385 TYR HD2 H N N 386 TYR HE1 H N N 387 TYR HE2 H N N 388 TYR HH H N N 389 TYR HXT H N N 390 VAL N N N N 391 VAL CA C N S 392 VAL C C N N 393 VAL O O N N 394 VAL CB C N N 395 VAL CG1 C N N 396 VAL CG2 C N N 397 VAL OXT O N N 398 VAL H H N N 399 VAL H2 H N N 400 VAL HA H N N 401 VAL HB H N N 402 VAL HG11 H N N 403 VAL HG12 H N N 404 VAL HG13 H N N 405 VAL HG21 H N N 406 VAL HG22 H N N 407 VAL HG23 H N N 408 VAL HXT H N N 409 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACY C O doub N N 1 ACY C OXT sing N N 2 ACY C CH3 sing N N 3 ACY OXT HXT sing N N 4 ACY CH3 H1 sing N N 5 ACY CH3 H2 sing N N 6 ACY CH3 H3 sing N N 7 ALA N CA sing N N 8 ALA N H sing N N 9 ALA N H2 sing N N 10 ALA CA C sing N N 11 ALA CA CB sing N N 12 ALA CA HA sing N N 13 ALA C O doub N N 14 ALA C OXT sing N N 15 ALA CB HB1 sing N N 16 ALA CB HB2 sing N N 17 ALA CB HB3 sing N N 18 ALA OXT HXT sing N N 19 ARG N CA sing N N 20 ARG N H sing N N 21 ARG N H2 sing N N 22 ARG CA C sing N N 23 ARG CA CB sing N N 24 ARG CA HA sing N N 25 ARG C O doub N N 26 ARG C OXT sing N N 27 ARG CB CG sing N N 28 ARG CB HB2 sing N N 29 ARG CB HB3 sing N N 30 ARG CG CD sing N N 31 ARG CG HG2 sing N N 32 ARG CG HG3 sing N N 33 ARG CD NE sing N N 34 ARG CD HD2 sing N N 35 ARG CD HD3 sing N N 36 ARG NE CZ sing N N 37 ARG NE HE sing N N 38 ARG CZ NH1 sing N N 39 ARG CZ NH2 doub N N 40 ARG NH1 HH11 sing N N 41 ARG NH1 HH12 sing N N 42 ARG NH2 HH21 sing N N 43 ARG NH2 HH22 sing N N 44 ARG OXT HXT sing N N 45 ASN N CA sing N N 46 ASN N H sing N N 47 ASN N H2 sing N N 48 ASN CA C sing N N 49 ASN CA CB sing N N 50 ASN CA HA sing N N 51 ASN C O doub N N 52 ASN C OXT sing N N 53 ASN CB CG sing N N 54 ASN CB HB2 sing N N 55 ASN CB HB3 sing N N 56 ASN CG OD1 doub N N 57 ASN CG ND2 sing N N 58 ASN ND2 HD21 sing N N 59 ASN ND2 HD22 sing N N 60 ASN OXT HXT sing N N 61 ASP N CA sing N N 62 ASP N H sing N N 63 ASP N H2 sing N N 64 ASP CA C sing N N 65 ASP CA CB sing N N 66 ASP CA HA sing N N 67 ASP C O doub N N 68 ASP C OXT sing N N 69 ASP CB CG sing N N 70 ASP CB HB2 sing N N 71 ASP CB HB3 sing N N 72 ASP CG OD1 doub N N 73 ASP CG OD2 sing N N 74 ASP OD2 HD2 sing N N 75 ASP OXT HXT sing N N 76 GLN N CA sing N N 77 GLN N H sing N N 78 GLN N H2 sing N N 79 GLN CA C sing N N 80 GLN CA CB sing N N 81 GLN CA HA sing N N 82 GLN C O doub N N 83 GLN C OXT sing N N 84 GLN CB CG sing N N 85 GLN CB HB2 sing N N 86 GLN CB HB3 sing N N 87 GLN CG CD sing N N 88 GLN CG HG2 sing N N 89 GLN CG HG3 sing N N 90 GLN CD OE1 doub N N 91 GLN CD NE2 sing N N 92 GLN NE2 HE21 sing N N 93 GLN NE2 HE22 sing N N 94 GLN OXT HXT sing N N 95 GLU N CA sing N N 96 GLU N H sing N N 97 GLU N H2 sing N N 98 GLU CA C sing N N 99 GLU CA CB sing N N 100 GLU CA HA sing N N 101 GLU C O doub N N 102 GLU C OXT sing N N 103 GLU CB CG sing N N 104 GLU CB HB2 sing N N 105 GLU CB HB3 sing N N 106 GLU CG CD sing N N 107 GLU CG HG2 sing N N 108 GLU CG HG3 sing N N 109 GLU CD OE1 doub N N 110 GLU CD OE2 sing N N 111 GLU OE2 HE2 sing N N 112 GLU OXT HXT sing N N 113 GLY N CA sing N N 114 GLY N H sing N N 115 GLY N H2 sing N N 116 GLY CA C sing N N 117 GLY CA HA2 sing N N 118 GLY CA HA3 sing N N 119 GLY C O doub N N 120 GLY C OXT sing N N 121 GLY OXT HXT sing N N 122 HIS N CA sing N N 123 HIS N H sing N N 124 HIS N H2 sing N N 125 HIS CA C sing N N 126 HIS CA CB sing N N 127 HIS CA HA sing N N 128 HIS C O doub N N 129 HIS C OXT sing N N 130 HIS CB CG sing N N 131 HIS CB HB2 sing N N 132 HIS CB HB3 sing N N 133 HIS CG ND1 sing Y N 134 HIS CG CD2 doub Y N 135 HIS ND1 CE1 doub Y N 136 HIS ND1 HD1 sing N N 137 HIS CD2 NE2 sing Y N 138 HIS CD2 HD2 sing N N 139 HIS CE1 NE2 sing Y N 140 HIS CE1 HE1 sing N N 141 HIS NE2 HE2 sing N N 142 HIS OXT HXT sing N N 143 HOH O H1 sing N N 144 HOH O H2 sing N N 145 ILE N CA sing N N 146 ILE N H sing N N 147 ILE N H2 sing N N 148 ILE CA C sing N N 149 ILE CA CB sing N N 150 ILE CA HA sing N N 151 ILE C O doub N N 152 ILE C OXT sing N N 153 ILE CB CG1 sing N N 154 ILE CB CG2 sing N N 155 ILE CB HB sing N N 156 ILE CG1 CD1 sing N N 157 ILE CG1 HG12 sing N N 158 ILE CG1 HG13 sing N N 159 ILE CG2 HG21 sing N N 160 ILE CG2 HG22 sing N N 161 ILE CG2 HG23 sing N N 162 ILE CD1 HD11 sing N N 163 ILE CD1 HD12 sing N N 164 ILE CD1 HD13 sing N N 165 ILE OXT HXT sing N N 166 LEU N CA sing N N 167 LEU N H sing N N 168 LEU N H2 sing N N 169 LEU CA C sing N N 170 LEU CA CB sing N N 171 LEU CA HA sing N N 172 LEU C O doub N N 173 LEU C OXT sing N N 174 LEU CB CG sing N N 175 LEU CB HB2 sing N N 176 LEU CB HB3 sing N N 177 LEU CG CD1 sing N N 178 LEU CG CD2 sing N N 179 LEU CG HG sing N N 180 LEU CD1 HD11 sing N N 181 LEU CD1 HD12 sing N N 182 LEU CD1 HD13 sing N N 183 LEU CD2 HD21 sing N N 184 LEU CD2 HD22 sing N N 185 LEU CD2 HD23 sing N N 186 LEU OXT HXT sing N N 187 LYS N CA sing N N 188 LYS N H sing N N 189 LYS N H2 sing N N 190 LYS CA C sing N N 191 LYS CA CB sing N N 192 LYS CA HA sing N N 193 LYS C O doub N N 194 LYS C OXT sing N N 195 LYS CB CG sing N N 196 LYS CB HB2 sing N N 197 LYS CB HB3 sing N N 198 LYS CG CD sing N N 199 LYS CG HG2 sing N N 200 LYS CG HG3 sing N N 201 LYS CD CE sing N N 202 LYS CD HD2 sing N N 203 LYS CD HD3 sing N N 204 LYS CE NZ sing N N 205 LYS CE HE2 sing N N 206 LYS CE HE3 sing N N 207 LYS NZ HZ1 sing N N 208 LYS NZ HZ2 sing N N 209 LYS NZ HZ3 sing N N 210 LYS OXT HXT sing N N 211 MET N CA sing N N 212 MET N H sing N N 213 MET N H2 sing N N 214 MET CA C sing N N 215 MET CA CB sing N N 216 MET CA HA sing N N 217 MET C O doub N N 218 MET C OXT sing N N 219 MET CB CG sing N N 220 MET CB HB2 sing N N 221 MET CB HB3 sing N N 222 MET CG SD sing N N 223 MET CG HG2 sing N N 224 MET CG HG3 sing N N 225 MET SD CE sing N N 226 MET CE HE1 sing N N 227 MET CE HE2 sing N N 228 MET CE HE3 sing N N 229 MET OXT HXT sing N N 230 PHE N CA sing N N 231 PHE N H sing N N 232 PHE N H2 sing N N 233 PHE CA C sing N N 234 PHE CA CB sing N N 235 PHE CA HA sing N N 236 PHE C O doub N N 237 PHE C OXT sing N N 238 PHE CB CG sing N N 239 PHE CB HB2 sing N N 240 PHE CB HB3 sing N N 241 PHE CG CD1 doub Y N 242 PHE CG CD2 sing Y N 243 PHE CD1 CE1 sing Y N 244 PHE CD1 HD1 sing N N 245 PHE CD2 CE2 doub Y N 246 PHE CD2 HD2 sing N N 247 PHE CE1 CZ doub Y N 248 PHE CE1 HE1 sing N N 249 PHE CE2 CZ sing Y N 250 PHE CE2 HE2 sing N N 251 PHE CZ HZ sing N N 252 PHE OXT HXT sing N N 253 PRO N CA sing N N 254 PRO N CD sing N N 255 PRO N H sing N N 256 PRO CA C sing N N 257 PRO CA CB sing N N 258 PRO CA HA sing N N 259 PRO C O doub N N 260 PRO C OXT sing N N 261 PRO CB CG sing N N 262 PRO CB HB2 sing N N 263 PRO CB HB3 sing N N 264 PRO CG CD sing N N 265 PRO CG HG2 sing N N 266 PRO CG HG3 sing N N 267 PRO CD HD2 sing N N 268 PRO CD HD3 sing N N 269 PRO OXT HXT sing N N 270 SER N CA sing N N 271 SER N H sing N N 272 SER N H2 sing N N 273 SER CA C sing N N 274 SER CA CB sing N N 275 SER CA HA sing N N 276 SER C O doub N N 277 SER C OXT sing N N 278 SER CB OG sing N N 279 SER CB HB2 sing N N 280 SER CB HB3 sing N N 281 SER OG HG sing N N 282 SER OXT HXT sing N N 283 SO4 S O1 doub N N 284 SO4 S O2 doub N N 285 SO4 S O3 sing N N 286 SO4 S O4 sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TRS C C1 sing N N 332 TRS C C2 sing N N 333 TRS C C3 sing N N 334 TRS C N sing N N 335 TRS C1 O1 sing N N 336 TRS C1 H11 sing N N 337 TRS C1 H12 sing N N 338 TRS C2 O2 sing N N 339 TRS C2 H21 sing N N 340 TRS C2 H22 sing N N 341 TRS C3 O3 sing N N 342 TRS C3 H31 sing N N 343 TRS C3 H32 sing N N 344 TRS N HN1 sing N N 345 TRS N HN2 sing N N 346 TRS N HN3 sing N N 347 TRS O1 HO1 sing N N 348 TRS O2 HO2 sing N N 349 TRS O3 HO3 sing N N 350 TYR N CA sing N N 351 TYR N H sing N N 352 TYR N H2 sing N N 353 TYR CA C sing N N 354 TYR CA CB sing N N 355 TYR CA HA sing N N 356 TYR C O doub N N 357 TYR C OXT sing N N 358 TYR CB CG sing N N 359 TYR CB HB2 sing N N 360 TYR CB HB3 sing N N 361 TYR CG CD1 doub Y N 362 TYR CG CD2 sing Y N 363 TYR CD1 CE1 sing Y N 364 TYR CD1 HD1 sing N N 365 TYR CD2 CE2 doub Y N 366 TYR CD2 HD2 sing N N 367 TYR CE1 CZ doub Y N 368 TYR CE1 HE1 sing N N 369 TYR CE2 CZ sing Y N 370 TYR CE2 HE2 sing N N 371 TYR CZ OH sing N N 372 TYR OH HH sing N N 373 TYR OXT HXT sing N N 374 VAL N CA sing N N 375 VAL N H sing N N 376 VAL N H2 sing N N 377 VAL CA C sing N N 378 VAL CA CB sing N N 379 VAL CA HA sing N N 380 VAL C O doub N N 381 VAL C OXT sing N N 382 VAL CB CG1 sing N N 383 VAL CB CG2 sing N N 384 VAL CB HB sing N N 385 VAL CG1 HG11 sing N N 386 VAL CG1 HG12 sing N N 387 VAL CG1 HG13 sing N N 388 VAL CG2 HG21 sing N N 389 VAL CG2 HG22 sing N N 390 VAL CG2 HG23 sing N N 391 VAL OXT HXT sing N N 392 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 4 'ACETIC ACID' ACY 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1AD2 _pdbx_initial_refinement_model.details 'PDB entry 1AD2' #