HEADER CELL INVASION 17-FEB-11 3QRC TITLE THE CRYSTAL STRUCTURE OF AIL, THE ATTACHMENT INVASION LOCUS PROTEIN OF TITLE 2 YERSINIA PESTIS, IN COMPLEX WITH THE HEPARIN ANALOGUE SUCROSE TITLE 3 OCTASULFATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATTACHMENT INVASION LOCUS PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 27-182; COMPND 5 SYNONYM: AIL; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 632; SOURCE 4 GENE: AIL, YPO2905; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-BARREL PROTEIN, ATTACHMENT AND INVASION VIRULENCE, LAMININ, KEYWDS 2 HEPARIN, CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR S.YAMASHITA,P.LUKACIK,N.NOINAJ,S.K.BUCHANAN REVDAT 3 13-SEP-23 3QRC 1 HETSYN REVDAT 2 29-JUL-20 3QRC 1 COMPND REMARK SEQADV HET REVDAT 2 2 1 HETNAM FORMUL LINK SITE REVDAT 2 3 1 ATOM REVDAT 1 23-NOV-11 3QRC 0 JRNL AUTH S.YAMASHITA,P.LUKACIK,T.J.BARNARD,N.NOINAJ,S.FELEK, JRNL AUTH 2 T.M.TSANG,E.S.KRUKONIS,B.J.HINNEBUSCH,S.K.BUCHANAN JRNL TITL STRUCTURAL INSIGHTS INTO AIL-MEDIATED ADHESION IN YERSINIA JRNL TITL 2 PESTIS. JRNL REF STRUCTURE V. 19 1672 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 22078566 JRNL DOI 10.1016/J.STR.2011.08.010 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 37761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1887 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.9332 - 3.9871 1.00 3558 195 0.2206 0.2230 REMARK 3 2 3.9871 - 3.1655 1.00 3591 194 0.1910 0.2048 REMARK 3 3 3.1655 - 2.7656 1.00 3579 188 0.1904 0.2116 REMARK 3 4 2.7656 - 2.5128 1.00 3598 186 0.1944 0.2391 REMARK 3 5 2.5128 - 2.3328 1.00 3613 172 0.1972 0.2124 REMARK 3 6 2.3328 - 2.1953 1.00 3570 175 0.1825 0.2273 REMARK 3 7 2.1953 - 2.0853 1.00 3617 187 0.1820 0.2059 REMARK 3 8 2.0853 - 1.9946 1.00 3588 197 0.1943 0.2277 REMARK 3 9 1.9946 - 1.9178 1.00 3577 200 0.2237 0.2660 REMARK 3 10 1.9178 - 1.8516 1.00 3583 193 0.2916 0.2756 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 55.54 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.45670 REMARK 3 B22 (A**2) : -0.45670 REMARK 3 B33 (A**2) : 0.91330 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2829 REMARK 3 ANGLE : 1.381 3551 REMARK 3 CHIRALITY : 0.092 363 REMARK 3 PLANARITY : 0.004 425 REMARK 3 DIHEDRAL : 24.433 989 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 27.5087 -5.9311 6.2962 REMARK 3 T TENSOR REMARK 3 T11: 0.2212 T22: 0.1545 REMARK 3 T33: 0.1047 T12: -0.0590 REMARK 3 T13: 0.0122 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 2.3351 L22: 1.6937 REMARK 3 L33: 2.5282 L12: 0.7810 REMARK 3 L13: -1.2020 L23: -1.7431 REMARK 3 S TENSOR REMARK 3 S11: -0.1295 S12: 0.1367 S13: 0.1045 REMARK 3 S21: -0.3587 S22: 0.0714 S23: -0.0224 REMARK 3 S31: 0.5121 S32: -0.2548 S33: 0.0496 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 18.1063 -20.5189 -17.5598 REMARK 3 T TENSOR REMARK 3 T11: 0.2124 T22: 0.1464 REMARK 3 T33: 0.0927 T12: -0.0606 REMARK 3 T13: -0.0130 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 2.4918 L22: 1.6138 REMARK 3 L33: 2.4983 L12: 0.7821 REMARK 3 L13: 1.1779 L23: 1.7554 REMARK 3 S TENSOR REMARK 3 S11: -0.1155 S12: 0.1500 S13: -0.1259 REMARK 3 S21: -0.3277 S22: 0.0750 S23: 0.0292 REMARK 3 S31: -0.5091 S32: 0.2681 S33: 0.0397 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 26:84 OR RESSEQ REMARK 3 89:182 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 26:84 OR RESSEQ REMARK 3 89:182 ) REMARK 3 ATOM PAIRS NUMBER : 1156 REMARK 3 RMSD : 0.076 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QRC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000064005. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JAN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37771 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 79.057 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.71300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.110 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3QRA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG400, 0.2 M LITHIUM SULFATE, 0.1 REMARK 280 M CITRIC ACID, PH 3.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.66400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.83200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 85 REMARK 465 GLY A 86 REMARK 465 PHE A 87 REMARK 465 LYS A 88 REMARK 465 GLY B 86 REMARK 465 PHE B 87 REMARK 465 LYS B 88 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 26 CG SD CE REMARK 470 GLU A 27 CG CD OE1 OE2 REMARK 470 LYS A 50 CE NZ REMARK 470 ARG A 53 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 81 CG CD OE1 OE2 REMARK 470 VAL A 84 CG1 CG2 REMARK 470 ASP A 91 CG OD1 OD2 REMARK 470 GLU A 109 OE1 OE2 REMARK 470 LYS A 125 NZ REMARK 470 PHE A 130 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 134 CD OE1 OE2 REMARK 470 LYS A 170 CE NZ REMARK 470 GLU B 27 CG CD OE1 OE2 REMARK 470 LYS B 50 CE NZ REMARK 470 PHE B 80 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 81 CG CD OE1 OE2 REMARK 470 ASP B 85 CG OD1 OD2 REMARK 470 ASP B 91 CG OD1 OD2 REMARK 470 ASP B 93 OD1 OD2 REMARK 470 GLU B 109 CD OE1 OE2 REMARK 470 GLN B 132 CG CD OE1 NE2 REMARK 470 GLU B 134 OE1 OE2 REMARK 470 ASN B 154 OD1 REMARK 470 LYS B 170 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O5 GU4 C 1 O2 YYJ C 2 2.13 REMARK 500 O5 GU4 D 1 O2 YYJ D 2 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 162 CD GLU A 162 OE1 -0.118 REMARK 500 GLU A 162 CD GLU A 162 OE2 -0.123 REMARK 500 GLU B 162 CD GLU B 162 OE1 -0.120 REMARK 500 GLU B 162 CD GLU B 162 OE2 -0.117 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 162 OE1 - CD - OE2 ANGL. DEV. = -15.4 DEGREES REMARK 500 GLU B 162 OE1 - CD - OE2 ANGL. DEV. = -15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 167 -120.44 53.93 REMARK 500 ASP B 167 -121.10 54.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E A 183 REMARK 610 C8E B 183 REMARK 610 C8E B 184 REMARK 610 C8E B 185 REMARK 610 C8E B 186 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3QRA RELATED DB: PDB REMARK 900 APO AIL DBREF 3QRC A 27 182 UNP Q0WCZ9 Q0WCZ9_YERPE 27 182 DBREF 3QRC B 27 182 UNP Q0WCZ9 Q0WCZ9_YERPE 27 182 SEQADV 3QRC MET A 26 UNP Q0WCZ9 INITIATING METHIONINE SEQADV 3QRC MET B 26 UNP Q0WCZ9 INITIATING METHIONINE SEQRES 1 A 157 MET GLU GLY GLU SER SER ILE SER ILE GLY TYR ALA GLN SEQRES 2 A 157 SER ARG VAL LYS GLU ASP GLY TYR LYS LEU ASP LYS ASN SEQRES 3 A 157 PRO ARG GLY PHE ASN LEU LYS TYR ARG TYR GLU PHE ASN SEQRES 4 A 157 ASN ASP TRP GLY VAL ILE GLY SER PHE ALA GLN THR ARG SEQRES 5 A 157 ARG GLY PHE GLU GLU SER VAL ASP GLY PHE LYS LEU ILE SEQRES 6 A 157 ASP GLY ASP PHE LYS TYR TYR SER VAL THR ALA GLY PRO SEQRES 7 A 157 VAL PHE ARG ILE ASN GLU TYR VAL SER LEU TYR GLY LEU SEQRES 8 A 157 LEU GLY ALA GLY HIS GLY LYS ALA LYS PHE SER SER ILE SEQRES 9 A 157 PHE GLY GLN SER GLU SER ARG SER LYS THR SER LEU ALA SEQRES 10 A 157 TYR GLY ALA GLY LEU GLN PHE ASN PRO HIS PRO ASN PHE SEQRES 11 A 157 VAL ILE ASP ALA SER TYR GLU TYR SER LYS LEU ASP ASP SEQRES 12 A 157 VAL LYS VAL GLY THR TRP MET LEU GLY ALA GLY TYR ARG SEQRES 13 A 157 PHE SEQRES 1 B 157 MET GLU GLY GLU SER SER ILE SER ILE GLY TYR ALA GLN SEQRES 2 B 157 SER ARG VAL LYS GLU ASP GLY TYR LYS LEU ASP LYS ASN SEQRES 3 B 157 PRO ARG GLY PHE ASN LEU LYS TYR ARG TYR GLU PHE ASN SEQRES 4 B 157 ASN ASP TRP GLY VAL ILE GLY SER PHE ALA GLN THR ARG SEQRES 5 B 157 ARG GLY PHE GLU GLU SER VAL ASP GLY PHE LYS LEU ILE SEQRES 6 B 157 ASP GLY ASP PHE LYS TYR TYR SER VAL THR ALA GLY PRO SEQRES 7 B 157 VAL PHE ARG ILE ASN GLU TYR VAL SER LEU TYR GLY LEU SEQRES 8 B 157 LEU GLY ALA GLY HIS GLY LYS ALA LYS PHE SER SER ILE SEQRES 9 B 157 PHE GLY GLN SER GLU SER ARG SER LYS THR SER LEU ALA SEQRES 10 B 157 TYR GLY ALA GLY LEU GLN PHE ASN PRO HIS PRO ASN PHE SEQRES 11 B 157 VAL ILE ASP ALA SER TYR GLU TYR SER LYS LEU ASP ASP SEQRES 12 B 157 VAL LYS VAL GLY THR TRP MET LEU GLY ALA GLY TYR ARG SEQRES 13 B 157 PHE HET GU4 C 1 27 HET YYJ C 2 28 HET GU4 D 1 27 HET YYJ D 2 28 HET C8E A 183 9 HET C8E A 184 21 HET C8E B 1 21 HET C8E B 183 15 HET C8E B 184 9 HET C8E B 185 9 HET C8E B 186 8 HETNAM GU4 2,3,4,6-TETRA-O-SULFONATO-ALPHA-D-GLUCOPYRANOSE HETNAM YYJ 1,3,4,6-TETRA-O-SULFO-BETA-D-FRUCTOFURANOSE HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE HETSYN GU4 2,3,4,6-TETRA-O-SULFONATO-ALPHA-D-GLUCOSE; 2,3,4,6- HETSYN 2 GU4 TETRA-O-SULFONATO-D-GLUCOSE; 2,3,4,6-TETRA-O- HETSYN 3 GU4 SULFONATO-GLUCOSE FORMUL 3 GU4 2(C6 H12 O18 S4) FORMUL 3 YYJ 2(C6 H12 O18 S4) FORMUL 5 C8E 7(C16 H34 O5) FORMUL 12 HOH *121(H2 O) SHEET 1 A10 TYR A 46 LYS A 47 0 SHEET 2 A10 GLU A 29 GLU A 43 -1 N GLU A 43 O TYR A 46 SHEET 3 A10 VAL A 169 PHE A 182 -1 O LYS A 170 N LYS A 42 SHEET 4 A10 PHE A 155 LEU A 166 -1 N LEU A 166 O VAL A 169 SHEET 5 A10 SER A 133 PHE A 149 -1 N PHE A 149 O ILE A 157 SHEET 6 A10 VAL A 111 SER A 128 -1 N PHE A 126 O GLU A 134 SHEET 7 A10 ILE A 90 ARG A 106 -1 N PHE A 105 O LEU A 113 SHEET 8 A10 TRP A 67 GLU A 82 -1 N SER A 72 O THR A 100 SHEET 9 A10 ARG A 53 GLU A 62 -1 N LEU A 57 O PHE A 73 SHEET 10 A10 GLU A 29 GLU A 43 -1 N SER A 31 O ARG A 60 SHEET 1 B10 TYR B 46 LYS B 47 0 SHEET 2 B10 GLU B 29 GLU B 43 -1 N GLU B 43 O TYR B 46 SHEET 3 B10 VAL B 169 PHE B 182 -1 O LYS B 170 N LYS B 42 SHEET 4 B10 PHE B 155 LEU B 166 -1 N LEU B 166 O VAL B 169 SHEET 5 B10 SER B 133 PHE B 149 -1 N PHE B 149 O ILE B 157 SHEET 6 B10 VAL B 111 SER B 128 -1 N PHE B 126 O GLU B 134 SHEET 7 B10 ILE B 90 ARG B 106 -1 N ASP B 93 O LYS B 125 SHEET 8 B10 TRP B 67 GLU B 82 -1 N SER B 72 O THR B 100 SHEET 9 B10 ARG B 53 GLU B 62 -1 N TYR B 59 O GLY B 71 SHEET 10 B10 GLU B 29 GLU B 43 -1 N SER B 31 O ARG B 60 LINK C1 GU4 C 1 O2 YYJ C 2 1555 1555 1.42 LINK C1 GU4 D 1 O2 YYJ D 2 1555 1555 1.43 CISPEP 1 ASP A 49 LYS A 50 0 -18.31 CISPEP 2 ASP B 49 LYS B 50 0 -18.50 CRYST1 91.382 91.382 47.496 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010943 0.006318 0.000000 0.00000 SCALE2 0.000000 0.012636 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021054 0.00000