HEADER LYASE 17-FEB-11 3QRH TITLE CRYSTAL STRUCTURE OF FRUCTOSE BISPHOSPHATE ALDOLASE FROM TITLE 2 ENCEPHALITOZOON CUNICULI, BOUND TO GLYCERALDEHYDE 3-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRUCTOSE-BISPHOSPHATE ALDOLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 4.1.2.13; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENCEPHALITOZOON CUNICULI; SOURCE 3 ORGANISM_COMMON: MICROSPORIDIAN PARASITE; SOURCE 4 ORGANISM_TAXID: 6035; SOURCE 5 GENE: ECU01_0240; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SSGCID, ENCEPHALITOZOON CUNICULI, ALDOLASE, STRUCTURAL GENOMICS, KEYWDS 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 13-SEP-23 3QRH 1 REMARK SEQADV LINK REVDAT 1 23-MAR-11 3QRH 0 JRNL AUTH SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 2 (SSGCID),A.GARDBERG,T.ARAKAKI,B.STAKER JRNL TITL CRYSTAL STRUCTURE OF FRUCTOSE BISPHOSPHATE ALDOLASE FROM JRNL TITL 2 ENCEPHALITOZOON CUNICULI, BOUND TO GLYCERALDEHYDE JRNL TITL 3 3-PHOSPHATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 36267 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1783 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2514 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE SET COUNT : 128 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2591 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 221 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.26000 REMARK 3 B22 (A**2) : -0.50000 REMARK 3 B33 (A**2) : 1.77000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.109 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.312 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2672 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1826 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3617 ; 1.395 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4468 ; 0.919 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 346 ; 5.772 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 109 ;37.463 ;24.220 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 476 ;13.279 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;17.117 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 413 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2971 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 540 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1678 ; 0.764 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 699 ; 0.224 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2689 ; 1.343 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 994 ; 2.186 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 923 ; 3.482 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): -22.3557 24.6332 -4.3009 REMARK 3 T TENSOR REMARK 3 T11: 0.1061 T22: 0.0883 REMARK 3 T33: 0.0469 T12: 0.0517 REMARK 3 T13: -0.0283 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 1.6097 L22: 0.9674 REMARK 3 L33: 1.1170 L12: -0.3337 REMARK 3 L13: 0.7868 L23: 0.0958 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: 0.1580 S13: -0.0377 REMARK 3 S21: -0.1986 S22: 0.0289 S23: 0.1758 REMARK 3 S31: -0.1873 S32: -0.0940 S33: -0.0521 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 177 REMARK 3 ORIGIN FOR THE GROUP (A): -12.4717 9.3323 3.0711 REMARK 3 T TENSOR REMARK 3 T11: 0.0411 T22: 0.0379 REMARK 3 T33: 0.0574 T12: 0.0161 REMARK 3 T13: -0.0175 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.5734 L22: 1.5108 REMARK 3 L33: 1.2058 L12: 0.2383 REMARK 3 L13: 0.1371 L23: 0.0246 REMARK 3 S TENSOR REMARK 3 S11: 0.0388 S12: 0.0570 S13: -0.1656 REMARK 3 S21: -0.1030 S22: 0.0277 S23: -0.0328 REMARK 3 S31: 0.0903 S32: -0.0821 S33: -0.0665 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 178 A 292 REMARK 3 ORIGIN FOR THE GROUP (A): -13.3458 20.4638 17.1647 REMARK 3 T TENSOR REMARK 3 T11: 0.0352 T22: 0.0467 REMARK 3 T33: 0.0389 T12: 0.0243 REMARK 3 T13: 0.0104 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 1.2037 L22: 0.8235 REMARK 3 L33: 1.0392 L12: 0.0717 REMARK 3 L13: 0.2439 L23: 0.2055 REMARK 3 S TENSOR REMARK 3 S11: 0.0416 S12: -0.1482 S13: -0.0957 REMARK 3 S21: 0.0682 S22: 0.0356 S23: 0.0234 REMARK 3 S31: -0.0620 S32: -0.1390 S33: -0.0771 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 293 A 338 REMARK 3 ORIGIN FOR THE GROUP (A): -30.3993 32.1355 6.8547 REMARK 3 T TENSOR REMARK 3 T11: 0.1218 T22: 0.1539 REMARK 3 T33: 0.1271 T12: 0.1190 REMARK 3 T13: 0.0142 T23: 0.0338 REMARK 3 L TENSOR REMARK 3 L11: 1.0769 L22: 1.1964 REMARK 3 L33: 2.0269 L12: 0.1863 REMARK 3 L13: 1.1003 L23: 0.5234 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: -0.1156 S13: 0.1035 REMARK 3 S21: -0.1142 S22: -0.0136 S23: 0.2532 REMARK 3 S31: -0.2889 S32: -0.4021 S33: -0.0003 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3QRH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000064010. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977400 REMARK 200 MONOCHROMATOR : SI(220) ASYMMETRIC CUT SINGLE REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36353 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.6400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.43800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3MBF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG6000, 0.1 M HEPES, PROTEIN AT REMARK 280 ~22 MG/ML, GLYCERALDEHYDE 3-PHOSPHATE AT 10 MM., PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.40000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 31.40000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 61.27000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 69.04500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 61.27000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 69.04500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.40000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 61.27000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 69.04500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 31.40000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 61.27000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 69.04500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 31.40000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 382 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 32 CG CD CE NZ REMARK 470 ARG A 36 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 ARG A 65 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 LYS A 93 CG CD CE NZ REMARK 470 GLU A 111 CG CD OE1 OE2 REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 LYS A 132 CG CD CE NZ REMARK 470 ASP A 147 CG OD1 OD2 REMARK 470 ASN A 232 CG OD1 ND2 REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 ARG A 282 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 338 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 110 -135.70 52.65 REMARK 500 SER A 290 -156.24 -129.12 REMARK 500 ALA A 294 -75.55 -100.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE G3H A 339 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MBF RELATED DB: PDB REMARK 900 THE SAME ENZYME WITH THE REACTANT FRUCTOSE BISPHOSPHATE AT THE REMARK 900 ACTIVE SITE. REMARK 900 RELATED ID: 3MBD RELATED DB: PDB REMARK 900 THE SAME ENZYME WITH PHOSPHATE AT THE ACTIVE SITE. REMARK 900 RELATED ID: ENCUA.00440.A RELATED DB: TARGETDB DBREF 3QRH A 1 338 UNP Q8SSM8 ALF_ENCCU 1 338 SEQADV 3QRH GLY A -3 UNP Q8SSM8 EXPRESSION TAG SEQADV 3QRH PRO A -2 UNP Q8SSM8 EXPRESSION TAG SEQADV 3QRH GLY A -1 UNP Q8SSM8 EXPRESSION TAG SEQADV 3QRH SER A 0 UNP Q8SSM8 EXPRESSION TAG SEQRES 1 A 342 GLY PRO GLY SER MET MET ASP CYS ASP HIS LEU LEU ARG SEQRES 2 A 342 LEU GLY MET THR ALA LYS LYS ILE LEU GLU ASN GLY LYS SEQRES 3 A 342 GLY ILE LEU ALA ALA ASP GLU THR PRO LYS THR LEU GLY SEQRES 4 A 342 ARG ARG PHE GLU LYS LEU GLY ILE THR ASN THR GLU GLU SEQRES 5 A 342 ASN ARG ARG LYS PHE ARG GLU ILE LEU PHE SER THR LYS SEQRES 6 A 342 GLY ILE GLU ARG TYR ILE GLY GLY VAL ILE LEU ASN GLN SEQRES 7 A 342 GLU THR PHE GLU GLN THR SER GLY SER GLY VAL PRO LEU SEQRES 8 A 342 THR GLU LEU LEU LYS LYS LYS GLY ILE GLU ILE GLY ILE SEQRES 9 A 342 LYS LEU ASP LYS GLY LEU ILE ASP TYR LYS GLU LYS GLU SEQRES 10 A 342 LYS ILE SER VAL GLY LEU GLU ASP LEU ASP LEU ARG CYS SEQRES 11 A 342 LYS SER SER ALA PHE LYS ASP ALA THR PHE ALA LYS TRP SEQRES 12 A 342 ARG SER LEU PHE TYR PHE TYR ASP GLY ILE PRO SER GLU SEQRES 13 A 342 ASP CYS ILE ASN GLU ASN CYS SER ILE LEU ALA LYS TYR SEQRES 14 A 342 ALA ILE ILE CYS GLN LYS ASN GLY LEU VAL PRO ILE VAL SEQRES 15 A 342 GLU PRO GLU VAL PHE LEU GLU GLY ASP TYR SER MET LYS SEQRES 16 A 342 ARG SER TYR GLU VAL THR ARG GLN ILE LEU SER THR LEU SEQRES 17 A 342 MET LYS TYR LEU ASN TYR GLU LEU VAL TYR ILE PRO GLY SEQRES 18 A 342 VAL LEU ILE LYS ALA SER TYR VAL THR SER GLY GLN LEU SEQRES 19 A 342 SER ASN GLU LYS TYR THR PRO LYS LYS VAL ALA THR PHE SEQRES 20 A 342 THR LEU ARG ALA LEU LEU SER THR ILE PRO CYS GLY ILE SEQRES 21 A 342 PRO GLY ILE VAL PHE LEU SER GLY GLY HIS GLY SER GLU SEQRES 22 A 342 ASP ALA ILE GLY PHE LEU ASN ALA ILE ASN MET GLU ARG SEQRES 23 A 342 GLY CYS ARG THR TRP SER LEU SER PHE SER PHE ALA ARG SEQRES 24 A 342 ALA LEU THR ASP GLY VAL LEU GLU THR TRP ARG GLY ASP SEQRES 25 A 342 ASP SER ASN ILE GLU GLU ALA GLN LYS ILE LEU LEU GLU SEQRES 26 A 342 THR SER PHE LYS ALA CYS ARG GLY ALA GLU GLY LYS LEU SEQRES 27 A 342 TRP ASP GLN GLU HET G3H A 339 9 HETNAM G3H GLYCERALDEHYDE-3-PHOSPHATE FORMUL 2 G3H C3 H7 O6 P FORMUL 3 HOH *221(H2 O) HELIX 1 1 ASP A 3 GLU A 19 1 17 HELIX 2 2 ASN A 20 LYS A 22 5 3 HELIX 3 3 THR A 30 LEU A 41 1 12 HELIX 4 4 THR A 46 SER A 59 1 14 HELIX 5 5 GLY A 62 ARG A 65 5 4 HELIX 6 6 GLN A 74 GLN A 79 5 6 HELIX 7 7 PRO A 86 LYS A 94 1 9 HELIX 8 8 GLY A 118 GLU A 120 5 3 HELIX 9 9 ASP A 121 LYS A 127 1 7 HELIX 10 10 SER A 128 LYS A 132 5 5 HELIX 11 11 SER A 151 ASN A 172 1 22 HELIX 12 12 SER A 189 GLU A 211 1 23 HELIX 13 13 TYR A 214 VAL A 218 5 5 HELIX 14 14 THR A 236 ILE A 252 1 17 HELIX 15 15 GLY A 267 GLU A 281 1 15 HELIX 16 16 ALA A 294 ARG A 306 1 13 HELIX 17 17 ASP A 308 SER A 310 5 3 HELIX 18 18 ASN A 311 GLU A 331 1 21 SHEET 1 A 9 GLY A 23 ALA A 27 0 SHEET 2 A 9 ILE A 67 LEU A 72 1 O GLY A 68 N GLY A 23 SHEET 3 A 9 GLU A 97 LYS A 101 1 O GLY A 99 N VAL A 70 SHEET 4 A 9 PHE A 136 PHE A 143 1 O PHE A 136 N ILE A 100 SHEET 5 A 9 VAL A 175 VAL A 182 1 O GLU A 179 N SER A 141 SHEET 6 A 9 LEU A 219 ALA A 222 1 O LYS A 221 N VAL A 178 SHEET 7 A 9 GLY A 258 PHE A 261 1 O VAL A 260 N ILE A 220 SHEET 8 A 9 SER A 288 PHE A 293 1 O SER A 292 N PHE A 261 SHEET 9 A 9 GLY A 23 ALA A 27 1 N ILE A 24 O PHE A 291 SHEET 1 B 2 LEU A 106 TYR A 109 0 SHEET 2 B 2 GLU A 113 SER A 116 -1 O GLU A 113 N TYR A 109 LINK NZ LYS A 221 C2 G3H A 339 1555 1555 1.44 CISPEP 1 ILE A 149 PRO A 150 0 10.08 SITE 1 AC1 13 ALA A 26 ASP A 28 LYS A 138 LYS A 221 SITE 2 AC1 13 SER A 263 GLY A 264 SER A 292 PHE A 293 SITE 3 AC1 13 ALA A 294 ARG A 295 HOH A 367 HOH A 384 SITE 4 AC1 13 HOH A 549 CRYST1 122.540 138.090 62.800 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008161 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007242 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015924 0.00000