data_3QRP # _entry.id 3QRP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3QRP pdb_00003qrp 10.2210/pdb3qrp/pdb NDB NA0974 ? ? RCSB RCSB064018 ? ? WWPDB D_1000064018 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3QRP _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-02-18 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3QRQ . unspecified PDB 3QRR . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schellenberg, M.J.' 1 'Gesner, E.M.' 2 'Garside, E.L.' 3 'MacMillan, A.M.' 4 # _citation.id primary _citation.title 'Recognition and maturation of effector RNAs in a CRISPR interference pathway.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 18 _citation.page_first 688 _citation.page_last 692 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21572444 _citation.pdbx_database_id_DOI 10.1038/nsmb.2042 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gesner, E.M.' 1 ? primary 'Schellenberg, M.J.' 2 ? primary 'Garside, E.L.' 3 ? primary 'George, M.M.' 4 ? primary 'Macmillan, A.M.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative uncharacterized protein TTHB192' 30002.508 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(*GP*UP*CP*CP*CP*CP*AP*CP*(PGP))-3') ; 2886.715 1 ? ? ? 'CRISPR RNA' 3 polymer syn ;RNA (5'-R(P*(U5P)P*GP*UP*GP*GP*GP*G)-3') ; 2293.403 1 ? ? ? 'CRISPR RNA' 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 152 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MHHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKAMADIGSENLYFQMWLTKLVLNPASRAARRDLANPYE MHRTLSKAVSRALEEGRERLLWRLEPARGLEPPVVLVQTLTEPDWSVLDEGYAQVFPPKPFHPALKPGQRLRFRLRANPA KRLAATGKRVALKTPAEKVAWLERRLEEGGFRLLEGERGPWVQILQDTFLEVRRKKDGEEAGKLLQVQAVLFEGRLEVVD PERALATLRRGVGPGKALGLGLLSVAP ; ;MHHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKAMADIGSENLYFQMWLTKLVLNPASRAARRDLANPYE MHRTLSKAVSRALEEGRERLLWRLEPARGLEPPVVLVQTLTEPDWSVLDEGYAQVFPPKPFHPALKPGQRLRFRLRANPA KRLAATGKRVALKTPAEKVAWLERRLEEGGFRLLEGERGPWVQILQDTFLEVRRKKDGEEAGKLLQVQAVLFEGRLEVVD PERALATLRRGVGPGKALGLGLLSVAP ; A ? 2 polyribonucleotide no yes 'GUCCCCAC(PGP)' GUCCCCACG B ? 3 polyribonucleotide no yes '(U5P)GUGGGG' XGUGGGG C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SULFATE ION' SO4 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 PRO n 1 14 ARG n 1 15 GLY n 1 16 SER n 1 17 GLY n 1 18 MET n 1 19 LYS n 1 20 GLU n 1 21 THR n 1 22 ALA n 1 23 ALA n 1 24 ALA n 1 25 LYS n 1 26 PHE n 1 27 GLU n 1 28 ARG n 1 29 GLN n 1 30 HIS n 1 31 MET n 1 32 ASP n 1 33 SER n 1 34 PRO n 1 35 ASP n 1 36 LEU n 1 37 GLY n 1 38 THR n 1 39 ASP n 1 40 ASP n 1 41 ASP n 1 42 ASP n 1 43 LYS n 1 44 ALA n 1 45 MET n 1 46 ALA n 1 47 ASP n 1 48 ILE n 1 49 GLY n 1 50 SER n 1 51 GLU n 1 52 ASN n 1 53 LEU n 1 54 TYR n 1 55 PHE n 1 56 GLN n 1 57 MET n 1 58 TRP n 1 59 LEU n 1 60 THR n 1 61 LYS n 1 62 LEU n 1 63 VAL n 1 64 LEU n 1 65 ASN n 1 66 PRO n 1 67 ALA n 1 68 SER n 1 69 ARG n 1 70 ALA n 1 71 ALA n 1 72 ARG n 1 73 ARG n 1 74 ASP n 1 75 LEU n 1 76 ALA n 1 77 ASN n 1 78 PRO n 1 79 TYR n 1 80 GLU n 1 81 MET n 1 82 HIS n 1 83 ARG n 1 84 THR n 1 85 LEU n 1 86 SER n 1 87 LYS n 1 88 ALA n 1 89 VAL n 1 90 SER n 1 91 ARG n 1 92 ALA n 1 93 LEU n 1 94 GLU n 1 95 GLU n 1 96 GLY n 1 97 ARG n 1 98 GLU n 1 99 ARG n 1 100 LEU n 1 101 LEU n 1 102 TRP n 1 103 ARG n 1 104 LEU n 1 105 GLU n 1 106 PRO n 1 107 ALA n 1 108 ARG n 1 109 GLY n 1 110 LEU n 1 111 GLU n 1 112 PRO n 1 113 PRO n 1 114 VAL n 1 115 VAL n 1 116 LEU n 1 117 VAL n 1 118 GLN n 1 119 THR n 1 120 LEU n 1 121 THR n 1 122 GLU n 1 123 PRO n 1 124 ASP n 1 125 TRP n 1 126 SER n 1 127 VAL n 1 128 LEU n 1 129 ASP n 1 130 GLU n 1 131 GLY n 1 132 TYR n 1 133 ALA n 1 134 GLN n 1 135 VAL n 1 136 PHE n 1 137 PRO n 1 138 PRO n 1 139 LYS n 1 140 PRO n 1 141 PHE n 1 142 HIS n 1 143 PRO n 1 144 ALA n 1 145 LEU n 1 146 LYS n 1 147 PRO n 1 148 GLY n 1 149 GLN n 1 150 ARG n 1 151 LEU n 1 152 ARG n 1 153 PHE n 1 154 ARG n 1 155 LEU n 1 156 ARG n 1 157 ALA n 1 158 ASN n 1 159 PRO n 1 160 ALA n 1 161 LYS n 1 162 ARG n 1 163 LEU n 1 164 ALA n 1 165 ALA n 1 166 THR n 1 167 GLY n 1 168 LYS n 1 169 ARG n 1 170 VAL n 1 171 ALA n 1 172 LEU n 1 173 LYS n 1 174 THR n 1 175 PRO n 1 176 ALA n 1 177 GLU n 1 178 LYS n 1 179 VAL n 1 180 ALA n 1 181 TRP n 1 182 LEU n 1 183 GLU n 1 184 ARG n 1 185 ARG n 1 186 LEU n 1 187 GLU n 1 188 GLU n 1 189 GLY n 1 190 GLY n 1 191 PHE n 1 192 ARG n 1 193 LEU n 1 194 LEU n 1 195 GLU n 1 196 GLY n 1 197 GLU n 1 198 ARG n 1 199 GLY n 1 200 PRO n 1 201 TRP n 1 202 VAL n 1 203 GLN n 1 204 ILE n 1 205 LEU n 1 206 GLN n 1 207 ASP n 1 208 THR n 1 209 PHE n 1 210 LEU n 1 211 GLU n 1 212 VAL n 1 213 ARG n 1 214 ARG n 1 215 LYS n 1 216 LYS n 1 217 ASP n 1 218 GLY n 1 219 GLU n 1 220 GLU n 1 221 ALA n 1 222 GLY n 1 223 LYS n 1 224 LEU n 1 225 LEU n 1 226 GLN n 1 227 VAL n 1 228 GLN n 1 229 ALA n 1 230 VAL n 1 231 LEU n 1 232 PHE n 1 233 GLU n 1 234 GLY n 1 235 ARG n 1 236 LEU n 1 237 GLU n 1 238 VAL n 1 239 VAL n 1 240 ASP n 1 241 PRO n 1 242 GLU n 1 243 ARG n 1 244 ALA n 1 245 LEU n 1 246 ALA n 1 247 THR n 1 248 LEU n 1 249 ARG n 1 250 ARG n 1 251 GLY n 1 252 VAL n 1 253 GLY n 1 254 PRO n 1 255 GLY n 1 256 LYS n 1 257 ALA n 1 258 LEU n 1 259 GLY n 1 260 LEU n 1 261 GLY n 1 262 LEU n 1 263 LEU n 1 264 SER n 1 265 VAL n 1 266 ALA n 1 267 PRO n 2 1 G n 2 2 U n 2 3 C n 2 4 C n 2 5 C n 2 6 C n 2 7 A n 2 8 C n 2 9 PGP n 3 1 U5P n 3 2 G n 3 3 U n 3 4 G n 3 5 G n 3 6 G n 3 7 G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TTHB1192, TTHB192' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain HB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus HB8' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 300852 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET30a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'Chemically Synthesized RNA' 3 1 sample ? ? ? ? ? 'Chemically Synthesized RNA' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PGP 'RNA linking' n "GUANOSINE-3',5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 U5P non-polymer . "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -55 ? ? ? A . n A 1 2 HIS 2 -54 ? ? ? A . n A 1 3 HIS 3 -53 ? ? ? A . n A 1 4 HIS 4 -52 ? ? ? A . n A 1 5 HIS 5 -51 ? ? ? A . n A 1 6 HIS 6 -50 ? ? ? A . n A 1 7 HIS 7 -49 ? ? ? A . n A 1 8 SER 8 -48 ? ? ? A . n A 1 9 SER 9 -47 ? ? ? A . n A 1 10 GLY 10 -46 ? ? ? A . n A 1 11 LEU 11 -45 ? ? ? A . n A 1 12 VAL 12 -44 ? ? ? A . n A 1 13 PRO 13 -43 ? ? ? A . n A 1 14 ARG 14 -42 ? ? ? A . n A 1 15 GLY 15 -41 ? ? ? A . n A 1 16 SER 16 -40 ? ? ? A . n A 1 17 GLY 17 -39 ? ? ? A . n A 1 18 MET 18 -38 ? ? ? A . n A 1 19 LYS 19 -37 ? ? ? A . n A 1 20 GLU 20 -36 ? ? ? A . n A 1 21 THR 21 -35 ? ? ? A . n A 1 22 ALA 22 -34 ? ? ? A . n A 1 23 ALA 23 -33 ? ? ? A . n A 1 24 ALA 24 -32 ? ? ? A . n A 1 25 LYS 25 -31 ? ? ? A . n A 1 26 PHE 26 -30 ? ? ? A . n A 1 27 GLU 27 -29 ? ? ? A . n A 1 28 ARG 28 -28 ? ? ? A . n A 1 29 GLN 29 -27 ? ? ? A . n A 1 30 HIS 30 -26 ? ? ? A . n A 1 31 MET 31 -25 ? ? ? A . n A 1 32 ASP 32 -24 ? ? ? A . n A 1 33 SER 33 -23 ? ? ? A . n A 1 34 PRO 34 -22 ? ? ? A . n A 1 35 ASP 35 -21 ? ? ? A . n A 1 36 LEU 36 -20 ? ? ? A . n A 1 37 GLY 37 -19 ? ? ? A . n A 1 38 THR 38 -18 ? ? ? A . n A 1 39 ASP 39 -17 ? ? ? A . n A 1 40 ASP 40 -16 ? ? ? A . n A 1 41 ASP 41 -15 ? ? ? A . n A 1 42 ASP 42 -14 ? ? ? A . n A 1 43 LYS 43 -13 ? ? ? A . n A 1 44 ALA 44 -12 ? ? ? A . n A 1 45 MET 45 -11 ? ? ? A . n A 1 46 ALA 46 -10 ? ? ? A . n A 1 47 ASP 47 -9 ? ? ? A . n A 1 48 ILE 48 -8 ? ? ? A . n A 1 49 GLY 49 -7 ? ? ? A . n A 1 50 SER 50 -6 ? ? ? A . n A 1 51 GLU 51 -5 ? ? ? A . n A 1 52 ASN 52 -4 ? ? ? A . n A 1 53 LEU 53 -3 ? ? ? A . n A 1 54 TYR 54 -2 -2 TYR TYR A . n A 1 55 PHE 55 -1 -1 PHE PHE A . n A 1 56 GLN 56 0 0 GLN GLN A . n A 1 57 MET 57 1 1 MET MET A . n A 1 58 TRP 58 2 2 TRP TRP A . n A 1 59 LEU 59 3 3 LEU LEU A . n A 1 60 THR 60 4 4 THR THR A . n A 1 61 LYS 61 5 5 LYS LYS A . n A 1 62 LEU 62 6 6 LEU LEU A . n A 1 63 VAL 63 7 7 VAL VAL A . n A 1 64 LEU 64 8 8 LEU LEU A . n A 1 65 ASN 65 9 9 ASN ASN A . n A 1 66 PRO 66 10 10 PRO PRO A . n A 1 67 ALA 67 11 11 ALA ALA A . n A 1 68 SER 68 12 12 SER SER A . n A 1 69 ARG 69 13 13 ARG ARG A . n A 1 70 ALA 70 14 14 ALA ALA A . n A 1 71 ALA 71 15 15 ALA ALA A . n A 1 72 ARG 72 16 16 ARG ARG A . n A 1 73 ARG 73 17 17 ARG ARG A . n A 1 74 ASP 74 18 18 ASP ASP A . n A 1 75 LEU 75 19 19 LEU LEU A . n A 1 76 ALA 76 20 20 ALA ALA A . n A 1 77 ASN 77 21 21 ASN ASN A . n A 1 78 PRO 78 22 22 PRO PRO A . n A 1 79 TYR 79 23 23 TYR TYR A . n A 1 80 GLU 80 24 24 GLU GLU A . n A 1 81 MET 81 25 25 MET MET A . n A 1 82 HIS 82 26 26 HIS HIS A . n A 1 83 ARG 83 27 27 ARG ARG A . n A 1 84 THR 84 28 28 THR THR A . n A 1 85 LEU 85 29 29 LEU LEU A . n A 1 86 SER 86 30 30 SER SER A . n A 1 87 LYS 87 31 31 LYS LYS A . n A 1 88 ALA 88 32 32 ALA ALA A . n A 1 89 VAL 89 33 33 VAL VAL A . n A 1 90 SER 90 34 34 SER SER A . n A 1 91 ARG 91 35 35 ARG ARG A . n A 1 92 ALA 92 36 36 ALA ALA A . n A 1 93 LEU 93 37 37 LEU LEU A . n A 1 94 GLU 94 38 38 GLU GLU A . n A 1 95 GLU 95 39 39 GLU GLU A . n A 1 96 GLY 96 40 40 GLY GLY A . n A 1 97 ARG 97 41 41 ARG ARG A . n A 1 98 GLU 98 42 42 GLU GLU A . n A 1 99 ARG 99 43 43 ARG ARG A . n A 1 100 LEU 100 44 44 LEU LEU A . n A 1 101 LEU 101 45 45 LEU LEU A . n A 1 102 TRP 102 46 46 TRP TRP A . n A 1 103 ARG 103 47 47 ARG ARG A . n A 1 104 LEU 104 48 48 LEU LEU A . n A 1 105 GLU 105 49 49 GLU GLU A . n A 1 106 PRO 106 50 50 PRO PRO A . n A 1 107 ALA 107 51 51 ALA ALA A . n A 1 108 ARG 108 52 52 ARG ARG A . n A 1 109 GLY 109 53 53 GLY GLY A . n A 1 110 LEU 110 54 54 LEU LEU A . n A 1 111 GLU 111 55 55 GLU GLU A . n A 1 112 PRO 112 56 56 PRO PRO A . n A 1 113 PRO 113 57 57 PRO PRO A . n A 1 114 VAL 114 58 58 VAL VAL A . n A 1 115 VAL 115 59 59 VAL VAL A . n A 1 116 LEU 116 60 60 LEU LEU A . n A 1 117 VAL 117 61 61 VAL VAL A . n A 1 118 GLN 118 62 62 GLN GLN A . n A 1 119 THR 119 63 63 THR THR A . n A 1 120 LEU 120 64 64 LEU LEU A . n A 1 121 THR 121 65 65 THR THR A . n A 1 122 GLU 122 66 66 GLU GLU A . n A 1 123 PRO 123 67 67 PRO PRO A . n A 1 124 ASP 124 68 68 ASP ASP A . n A 1 125 TRP 125 69 69 TRP TRP A . n A 1 126 SER 126 70 70 SER SER A . n A 1 127 VAL 127 71 71 VAL VAL A . n A 1 128 LEU 128 72 72 LEU LEU A . n A 1 129 ASP 129 73 73 ASP ASP A . n A 1 130 GLU 130 74 74 GLU GLU A . n A 1 131 GLY 131 75 75 GLY GLY A . n A 1 132 TYR 132 76 76 TYR TYR A . n A 1 133 ALA 133 77 77 ALA ALA A . n A 1 134 GLN 134 78 78 GLN GLN A . n A 1 135 VAL 135 79 79 VAL VAL A . n A 1 136 PHE 136 80 80 PHE PHE A . n A 1 137 PRO 137 81 81 PRO PRO A . n A 1 138 PRO 138 82 82 PRO PRO A . n A 1 139 LYS 139 83 83 LYS LYS A . n A 1 140 PRO 140 84 84 PRO PRO A . n A 1 141 PHE 141 85 85 PHE PHE A . n A 1 142 HIS 142 86 86 HIS HIS A . n A 1 143 PRO 143 87 87 PRO PRO A . n A 1 144 ALA 144 88 88 ALA ALA A . n A 1 145 LEU 145 89 89 LEU LEU A . n A 1 146 LYS 146 90 90 LYS LYS A . n A 1 147 PRO 147 91 91 PRO PRO A . n A 1 148 GLY 148 92 92 GLY GLY A . n A 1 149 GLN 149 93 93 GLN GLN A . n A 1 150 ARG 150 94 94 ARG ARG A . n A 1 151 LEU 151 95 95 LEU LEU A . n A 1 152 ARG 152 96 96 ARG ARG A . n A 1 153 PHE 153 97 97 PHE PHE A . n A 1 154 ARG 154 98 98 ARG ARG A . n A 1 155 LEU 155 99 99 LEU LEU A . n A 1 156 ARG 156 100 100 ARG ARG A . n A 1 157 ALA 157 101 101 ALA ALA A . n A 1 158 ASN 158 102 102 ASN ASN A . n A 1 159 PRO 159 103 103 PRO PRO A . n A 1 160 ALA 160 104 104 ALA ALA A . n A 1 161 LYS 161 105 105 LYS LYS A . n A 1 162 ARG 162 106 106 ARG ARG A . n A 1 163 LEU 163 107 107 LEU LEU A . n A 1 164 ALA 164 108 108 ALA ALA A . n A 1 165 ALA 165 109 109 ALA ALA A . n A 1 166 THR 166 110 110 THR THR A . n A 1 167 GLY 167 111 111 GLY GLY A . n A 1 168 LYS 168 112 112 LYS LYS A . n A 1 169 ARG 169 113 113 ARG ARG A . n A 1 170 VAL 170 114 114 VAL VAL A . n A 1 171 ALA 171 115 115 ALA ALA A . n A 1 172 LEU 172 116 116 LEU LEU A . n A 1 173 LYS 173 117 117 LYS LYS A . n A 1 174 THR 174 118 118 THR THR A . n A 1 175 PRO 175 119 119 PRO PRO A . n A 1 176 ALA 176 120 120 ALA ALA A . n A 1 177 GLU 177 121 121 GLU GLU A . n A 1 178 LYS 178 122 122 LYS LYS A . n A 1 179 VAL 179 123 123 VAL VAL A . n A 1 180 ALA 180 124 124 ALA ALA A . n A 1 181 TRP 181 125 125 TRP TRP A . n A 1 182 LEU 182 126 126 LEU LEU A . n A 1 183 GLU 183 127 127 GLU GLU A . n A 1 184 ARG 184 128 128 ARG ARG A . n A 1 185 ARG 185 129 129 ARG ARG A . n A 1 186 LEU 186 130 130 LEU LEU A . n A 1 187 GLU 187 131 131 GLU GLU A . n A 1 188 GLU 188 132 132 GLU GLU A . n A 1 189 GLY 189 133 133 GLY GLY A . n A 1 190 GLY 190 134 134 GLY GLY A . n A 1 191 PHE 191 135 135 PHE PHE A . n A 1 192 ARG 192 136 136 ARG ARG A . n A 1 193 LEU 193 137 137 LEU LEU A . n A 1 194 LEU 194 138 138 LEU LEU A . n A 1 195 GLU 195 139 139 GLU GLU A . n A 1 196 GLY 196 140 140 GLY GLY A . n A 1 197 GLU 197 141 141 GLU GLU A . n A 1 198 ARG 198 142 142 ARG ARG A . n A 1 199 GLY 199 143 143 GLY GLY A . n A 1 200 PRO 200 144 144 PRO PRO A . n A 1 201 TRP 201 145 145 TRP TRP A . n A 1 202 VAL 202 146 146 VAL VAL A . n A 1 203 GLN 203 147 147 GLN GLN A . n A 1 204 ILE 204 148 148 ILE ILE A . n A 1 205 LEU 205 149 149 LEU LEU A . n A 1 206 GLN 206 150 150 GLN GLN A . n A 1 207 ASP 207 151 151 ASP ASP A . n A 1 208 THR 208 152 152 THR THR A . n A 1 209 PHE 209 153 153 PHE PHE A . n A 1 210 LEU 210 154 154 LEU LEU A . n A 1 211 GLU 211 155 155 GLU GLU A . n A 1 212 VAL 212 156 156 VAL VAL A . n A 1 213 ARG 213 157 157 ARG ARG A . n A 1 214 ARG 214 158 158 ARG ARG A . n A 1 215 LYS 215 159 159 LYS LYS A . n A 1 216 LYS 216 160 160 LYS LYS A . n A 1 217 ASP 217 161 161 ASP ASP A . n A 1 218 GLY 218 162 162 GLY GLY A . n A 1 219 GLU 219 163 163 GLU GLU A . n A 1 220 GLU 220 164 164 GLU GLU A . n A 1 221 ALA 221 165 165 ALA ALA A . n A 1 222 GLY 222 166 166 GLY GLY A . n A 1 223 LYS 223 167 167 LYS LYS A . n A 1 224 LEU 224 168 168 LEU LEU A . n A 1 225 LEU 225 169 169 LEU LEU A . n A 1 226 GLN 226 170 170 GLN GLN A . n A 1 227 VAL 227 171 171 VAL VAL A . n A 1 228 GLN 228 172 172 GLN GLN A . n A 1 229 ALA 229 173 173 ALA ALA A . n A 1 230 VAL 230 174 174 VAL VAL A . n A 1 231 LEU 231 175 175 LEU LEU A . n A 1 232 PHE 232 176 176 PHE PHE A . n A 1 233 GLU 233 177 177 GLU GLU A . n A 1 234 GLY 234 178 178 GLY GLY A . n A 1 235 ARG 235 179 179 ARG ARG A . n A 1 236 LEU 236 180 180 LEU LEU A . n A 1 237 GLU 237 181 181 GLU GLU A . n A 1 238 VAL 238 182 182 VAL VAL A . n A 1 239 VAL 239 183 183 VAL VAL A . n A 1 240 ASP 240 184 184 ASP ASP A . n A 1 241 PRO 241 185 185 PRO PRO A . n A 1 242 GLU 242 186 186 GLU GLU A . n A 1 243 ARG 243 187 187 ARG ARG A . n A 1 244 ALA 244 188 188 ALA ALA A . n A 1 245 LEU 245 189 189 LEU LEU A . n A 1 246 ALA 246 190 190 ALA ALA A . n A 1 247 THR 247 191 191 THR THR A . n A 1 248 LEU 248 192 192 LEU LEU A . n A 1 249 ARG 249 193 193 ARG ARG A . n A 1 250 ARG 250 194 194 ARG ARG A . n A 1 251 GLY 251 195 195 GLY GLY A . n A 1 252 VAL 252 196 196 VAL VAL A . n A 1 253 GLY 253 197 197 GLY GLY A . n A 1 254 PRO 254 198 198 PRO PRO A . n A 1 255 GLY 255 199 199 GLY GLY A . n A 1 256 LYS 256 200 200 LYS LYS A . n A 1 257 ALA 257 201 201 ALA ALA A . n A 1 258 LEU 258 202 202 LEU LEU A . n A 1 259 GLY 259 203 203 GLY GLY A . n A 1 260 LEU 260 204 204 LEU LEU A . n A 1 261 GLY 261 205 205 GLY GLY A . n A 1 262 LEU 262 206 206 LEU LEU A . n A 1 263 LEU 263 207 207 LEU LEU A . n A 1 264 SER 264 208 208 SER SER A . n A 1 265 VAL 265 209 209 VAL VAL A . n A 1 266 ALA 266 210 210 ALA ALA A . n A 1 267 PRO 267 211 211 PRO PRO A . n B 2 1 G 1 4 4 G G B . n B 2 2 U 2 5 5 U U B . n B 2 3 C 3 6 6 C C B . n B 2 4 C 4 7 7 C C B . n B 2 5 C 5 8 8 C C B . n B 2 6 C 6 9 9 C C B . n B 2 7 A 7 10 10 A A B . n B 2 8 C 8 11 11 C C B . n B 2 9 PGP 9 12 12 PGP PGP B . n C 3 1 U5P 1 15 15 U5P U5P C . n C 3 2 G 2 16 16 G G C . n C 3 3 U 3 17 17 U U C . n C 3 4 G 4 18 18 G G C . n C 3 5 G 5 19 19 G G C . n C 3 6 G 6 20 20 G G C . n C 3 7 G 7 21 21 G G C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 1 212 1 SO4 SO4 A . E 5 HOH 1 213 2 HOH HOH A . E 5 HOH 2 214 3 HOH HOH A . E 5 HOH 3 215 5 HOH HOH A . E 5 HOH 4 216 6 HOH HOH A . E 5 HOH 5 217 8 HOH HOH A . E 5 HOH 6 218 9 HOH HOH A . E 5 HOH 7 219 10 HOH HOH A . E 5 HOH 8 220 12 HOH HOH A . E 5 HOH 9 221 13 HOH HOH A . E 5 HOH 10 222 14 HOH HOH A . E 5 HOH 11 223 15 HOH HOH A . E 5 HOH 12 224 16 HOH HOH A . E 5 HOH 13 225 17 HOH HOH A . E 5 HOH 14 226 18 HOH HOH A . E 5 HOH 15 227 19 HOH HOH A . E 5 HOH 16 228 20 HOH HOH A . E 5 HOH 17 229 21 HOH HOH A . E 5 HOH 18 230 22 HOH HOH A . E 5 HOH 19 231 23 HOH HOH A . E 5 HOH 20 232 24 HOH HOH A . E 5 HOH 21 233 26 HOH HOH A . E 5 HOH 22 234 27 HOH HOH A . E 5 HOH 23 235 28 HOH HOH A . E 5 HOH 24 236 29 HOH HOH A . E 5 HOH 25 237 30 HOH HOH A . E 5 HOH 26 238 31 HOH HOH A . E 5 HOH 27 239 33 HOH HOH A . E 5 HOH 28 240 37 HOH HOH A . E 5 HOH 29 241 38 HOH HOH A . E 5 HOH 30 242 40 HOH HOH A . E 5 HOH 31 243 41 HOH HOH A . E 5 HOH 32 244 42 HOH HOH A . E 5 HOH 33 245 43 HOH HOH A . E 5 HOH 34 246 45 HOH HOH A . E 5 HOH 35 247 48 HOH HOH A . E 5 HOH 36 248 49 HOH HOH A . E 5 HOH 37 249 50 HOH HOH A . E 5 HOH 38 250 53 HOH HOH A . E 5 HOH 39 251 55 HOH HOH A . E 5 HOH 40 252 56 HOH HOH A . E 5 HOH 41 253 57 HOH HOH A . E 5 HOH 42 254 58 HOH HOH A . E 5 HOH 43 255 59 HOH HOH A . E 5 HOH 44 256 61 HOH HOH A . E 5 HOH 45 257 62 HOH HOH A . E 5 HOH 46 258 65 HOH HOH A . E 5 HOH 47 259 66 HOH HOH A . E 5 HOH 48 260 67 HOH HOH A . E 5 HOH 49 261 68 HOH HOH A . E 5 HOH 50 262 69 HOH HOH A . E 5 HOH 51 263 70 HOH HOH A . E 5 HOH 52 264 71 HOH HOH A . E 5 HOH 53 265 72 HOH HOH A . E 5 HOH 54 266 74 HOH HOH A . E 5 HOH 55 267 75 HOH HOH A . E 5 HOH 56 268 77 HOH HOH A . E 5 HOH 57 269 78 HOH HOH A . E 5 HOH 58 270 79 HOH HOH A . E 5 HOH 59 271 80 HOH HOH A . E 5 HOH 60 272 81 HOH HOH A . E 5 HOH 61 273 82 HOH HOH A . E 5 HOH 62 274 83 HOH HOH A . E 5 HOH 63 275 84 HOH HOH A . E 5 HOH 64 276 85 HOH HOH A . E 5 HOH 65 277 86 HOH HOH A . E 5 HOH 66 278 88 HOH HOH A . E 5 HOH 67 279 90 HOH HOH A . E 5 HOH 68 280 92 HOH HOH A . E 5 HOH 69 281 93 HOH HOH A . E 5 HOH 70 282 94 HOH HOH A . E 5 HOH 71 283 95 HOH HOH A . E 5 HOH 72 284 96 HOH HOH A . E 5 HOH 73 285 97 HOH HOH A . E 5 HOH 74 286 98 HOH HOH A . E 5 HOH 75 287 99 HOH HOH A . E 5 HOH 76 288 101 HOH HOH A . E 5 HOH 77 289 102 HOH HOH A . E 5 HOH 78 290 103 HOH HOH A . E 5 HOH 79 291 104 HOH HOH A . E 5 HOH 80 292 105 HOH HOH A . E 5 HOH 81 293 106 HOH HOH A . E 5 HOH 82 294 108 HOH HOH A . E 5 HOH 83 295 109 HOH HOH A . E 5 HOH 84 296 111 HOH HOH A . E 5 HOH 85 297 112 HOH HOH A . E 5 HOH 86 298 113 HOH HOH A . E 5 HOH 87 299 115 HOH HOH A . E 5 HOH 88 300 116 HOH HOH A . E 5 HOH 89 301 119 HOH HOH A . E 5 HOH 90 302 120 HOH HOH A . E 5 HOH 91 303 121 HOH HOH A . E 5 HOH 92 304 122 HOH HOH A . E 5 HOH 93 305 123 HOH HOH A . E 5 HOH 94 306 124 HOH HOH A . E 5 HOH 95 307 125 HOH HOH A . E 5 HOH 96 308 127 HOH HOH A . E 5 HOH 97 309 128 HOH HOH A . E 5 HOH 98 310 134 HOH HOH A . E 5 HOH 99 311 136 HOH HOH A . E 5 HOH 100 312 138 HOH HOH A . E 5 HOH 101 313 140 HOH HOH A . E 5 HOH 102 314 141 HOH HOH A . E 5 HOH 103 315 142 HOH HOH A . E 5 HOH 104 316 143 HOH HOH A . E 5 HOH 105 317 145 HOH HOH A . E 5 HOH 106 318 146 HOH HOH A . E 5 HOH 107 319 147 HOH HOH A . E 5 HOH 108 320 151 HOH HOH A . E 5 HOH 109 321 152 HOH HOH A . F 5 HOH 1 13 4 HOH HOH B . F 5 HOH 2 32 32 HOH HOH B . F 5 HOH 3 36 36 HOH HOH B . F 5 HOH 4 51 51 HOH HOH B . F 5 HOH 5 63 63 HOH HOH B . F 5 HOH 6 73 73 HOH HOH B . F 5 HOH 7 87 87 HOH HOH B . F 5 HOH 8 89 89 HOH HOH B . F 5 HOH 9 107 107 HOH HOH B . F 5 HOH 10 110 110 HOH HOH B . F 5 HOH 11 114 114 HOH HOH B . F 5 HOH 12 118 118 HOH HOH B . F 5 HOH 13 129 129 HOH HOH B . F 5 HOH 14 130 130 HOH HOH B . F 5 HOH 15 131 131 HOH HOH B . F 5 HOH 16 132 132 HOH HOH B . F 5 HOH 17 133 133 HOH HOH B . F 5 HOH 18 135 135 HOH HOH B . F 5 HOH 19 137 137 HOH HOH B . F 5 HOH 20 139 139 HOH HOH B . F 5 HOH 21 144 144 HOH HOH B . F 5 HOH 22 148 148 HOH HOH B . F 5 HOH 23 150 150 HOH HOH B . G 5 HOH 1 1 1 HOH HOH C . G 5 HOH 2 7 7 HOH HOH C . G 5 HOH 3 11 11 HOH HOH C . G 5 HOH 4 25 25 HOH HOH C . G 5 HOH 5 34 34 HOH HOH C . G 5 HOH 6 35 35 HOH HOH C . G 5 HOH 7 39 39 HOH HOH C . G 5 HOH 8 44 44 HOH HOH C . G 5 HOH 9 46 46 HOH HOH C . G 5 HOH 10 47 47 HOH HOH C . G 5 HOH 11 52 52 HOH HOH C . G 5 HOH 12 54 54 HOH HOH C . G 5 HOH 13 60 60 HOH HOH C . G 5 HOH 14 64 64 HOH HOH C . G 5 HOH 15 76 76 HOH HOH C . G 5 HOH 16 91 91 HOH HOH C . G 5 HOH 17 100 100 HOH HOH C . G 5 HOH 18 117 117 HOH HOH C . G 5 HOH 19 126 126 HOH HOH C . G 5 HOH 20 149 149 HOH HOH C . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER 1.3.1 '1 July 2005' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? # _cell.length_a 37.057 _cell.length_b 72.405 _cell.length_c 100.225 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3QRP _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3QRP _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3QRP _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.91 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 35.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '15% PEG 8000, 100mM KCl, 5mM MgSO4, 1mM spermidine, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2010-04-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97946 _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 # _reflns.entry_id 3QRP _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.d_resolution_low 34.752 _reflns.d_resolution_high 2.352 _reflns.number_all 11772 _reflns.number_obs 11249 _reflns.percent_possible_obs 95.52 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.352 _reflns_shell.d_res_low 2.43 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 75.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3QRP _refine.ls_d_res_high 2.3520 _refine.ls_d_res_low 34.752 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 95.5200 _refine.ls_number_reflns_obs 11249 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1774 _refine.ls_R_factor_R_work 0.1753 _refine.ls_wR_factor_R_work 0.1778 _refine.ls_R_factor_R_free 0.2175 _refine.ls_wR_factor_R_free 0.1958 _refine.ls_percent_reflns_R_free 4.7000 _refine.ls_number_reflns_R_free 534 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 24.391 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.0300 _refine.aniso_B[2][2] -0.4700 _refine.aniso_B[3][3] 1.5000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9450 _refine.correlation_coeff_Fo_to_Fc_free 0.9150 _refine.overall_SU_R_Cruickshank_DPI 0.5048 _refine.overall_SU_R_free 0.2155 _refine.pdbx_overall_ESU_R_Free 0.2400 _refine.overall_SU_ML 0.1340 _refine.overall_SU_B 9.9470 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8810 _refine.B_iso_max 61.310 _refine.B_iso_min 7.610 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.463 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1709 _refine_hist.pdbx_number_atoms_nucleic_acid 345 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 152 _refine_hist.number_atoms_total 2211 _refine_hist.d_res_high 2.3520 _refine_hist.d_res_low 34.752 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2133 0.013 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2963 1.518 2.200 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 213 8.273 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 79 31.440 21.519 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 311 17.635 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 25 18.090 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 334 0.106 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1498 0.016 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 842 0.227 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1365 0.310 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 153 0.180 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 61 0.211 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 15 0.207 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1104 1.681 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1715 2.228 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1282 3.744 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1248 4.593 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.3520 _refine_ls_shell.d_res_low 2.4130 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 72.2600 _refine_ls_shell.number_reflns_R_work 590 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.1850 _refine_ls_shell.R_factor_R_free 0.2280 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 620 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3QRP _struct.title 'Structure of Thermus Thermophilus Cse3 bound to an RNA representing a product mimic complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QRP _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' _struct_keywords.text 'RAMP domain, protein-RNA complex, RNA BINDING PROTEIN-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q53WG9_THET8 Q53WG9 1 ;MWLTKLVLNPASRAARRDLANPYEMHRTLSKAVSRALEEGRERLLWRLEPARGLEPPVVLVQTLTEPDWSVLDEGYAQVF PPKPFHPALKPGQRLRFRLRANPAKRLAATGKRVALKTPAEKVAWLERRLEEGGFRLLEGERGPWVQILQDTFLEVRRKK DGEEAGKLLQVQAVLFEGRLEVVDPERALATLRRGVGPGKALGLGLLSVAP ; 1 ? 2 PDB 3QRP 3QRP 2 GUCCCCACG 1 ? 3 PDB 3QRP 3QRP 3 XGUGGGG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3QRP A 57 ? 267 ? Q53WG9 1 ? 211 ? 1 211 2 2 3QRP B 1 ? 9 ? 3QRP 4 ? 12 ? 4 12 3 3 3QRP C 1 ? 7 ? 3QRP 15 ? 21 ? 15 21 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3QRP MET A 1 ? UNP Q53WG9 ? ? 'expression tag' -55 1 1 3QRP HIS A 2 ? UNP Q53WG9 ? ? 'expression tag' -54 2 1 3QRP HIS A 3 ? UNP Q53WG9 ? ? 'expression tag' -53 3 1 3QRP HIS A 4 ? UNP Q53WG9 ? ? 'expression tag' -52 4 1 3QRP HIS A 5 ? UNP Q53WG9 ? ? 'expression tag' -51 5 1 3QRP HIS A 6 ? UNP Q53WG9 ? ? 'expression tag' -50 6 1 3QRP HIS A 7 ? UNP Q53WG9 ? ? 'expression tag' -49 7 1 3QRP SER A 8 ? UNP Q53WG9 ? ? 'expression tag' -48 8 1 3QRP SER A 9 ? UNP Q53WG9 ? ? 'expression tag' -47 9 1 3QRP GLY A 10 ? UNP Q53WG9 ? ? 'expression tag' -46 10 1 3QRP LEU A 11 ? UNP Q53WG9 ? ? 'expression tag' -45 11 1 3QRP VAL A 12 ? UNP Q53WG9 ? ? 'expression tag' -44 12 1 3QRP PRO A 13 ? UNP Q53WG9 ? ? 'expression tag' -43 13 1 3QRP ARG A 14 ? UNP Q53WG9 ? ? 'expression tag' -42 14 1 3QRP GLY A 15 ? UNP Q53WG9 ? ? 'expression tag' -41 15 1 3QRP SER A 16 ? UNP Q53WG9 ? ? 'expression tag' -40 16 1 3QRP GLY A 17 ? UNP Q53WG9 ? ? 'expression tag' -39 17 1 3QRP MET A 18 ? UNP Q53WG9 ? ? 'expression tag' -38 18 1 3QRP LYS A 19 ? UNP Q53WG9 ? ? 'expression tag' -37 19 1 3QRP GLU A 20 ? UNP Q53WG9 ? ? 'expression tag' -36 20 1 3QRP THR A 21 ? UNP Q53WG9 ? ? 'expression tag' -35 21 1 3QRP ALA A 22 ? UNP Q53WG9 ? ? 'expression tag' -34 22 1 3QRP ALA A 23 ? UNP Q53WG9 ? ? 'expression tag' -33 23 1 3QRP ALA A 24 ? UNP Q53WG9 ? ? 'expression tag' -32 24 1 3QRP LYS A 25 ? UNP Q53WG9 ? ? 'expression tag' -31 25 1 3QRP PHE A 26 ? UNP Q53WG9 ? ? 'expression tag' -30 26 1 3QRP GLU A 27 ? UNP Q53WG9 ? ? 'expression tag' -29 27 1 3QRP ARG A 28 ? UNP Q53WG9 ? ? 'expression tag' -28 28 1 3QRP GLN A 29 ? UNP Q53WG9 ? ? 'expression tag' -27 29 1 3QRP HIS A 30 ? UNP Q53WG9 ? ? 'expression tag' -26 30 1 3QRP MET A 31 ? UNP Q53WG9 ? ? 'expression tag' -25 31 1 3QRP ASP A 32 ? UNP Q53WG9 ? ? 'expression tag' -24 32 1 3QRP SER A 33 ? UNP Q53WG9 ? ? 'expression tag' -23 33 1 3QRP PRO A 34 ? UNP Q53WG9 ? ? 'expression tag' -22 34 1 3QRP ASP A 35 ? UNP Q53WG9 ? ? 'expression tag' -21 35 1 3QRP LEU A 36 ? UNP Q53WG9 ? ? 'expression tag' -20 36 1 3QRP GLY A 37 ? UNP Q53WG9 ? ? 'expression tag' -19 37 1 3QRP THR A 38 ? UNP Q53WG9 ? ? 'expression tag' -18 38 1 3QRP ASP A 39 ? UNP Q53WG9 ? ? 'expression tag' -17 39 1 3QRP ASP A 40 ? UNP Q53WG9 ? ? 'expression tag' -16 40 1 3QRP ASP A 41 ? UNP Q53WG9 ? ? 'expression tag' -15 41 1 3QRP ASP A 42 ? UNP Q53WG9 ? ? 'expression tag' -14 42 1 3QRP LYS A 43 ? UNP Q53WG9 ? ? 'expression tag' -13 43 1 3QRP ALA A 44 ? UNP Q53WG9 ? ? 'expression tag' -12 44 1 3QRP MET A 45 ? UNP Q53WG9 ? ? 'expression tag' -11 45 1 3QRP ALA A 46 ? UNP Q53WG9 ? ? 'expression tag' -10 46 1 3QRP ASP A 47 ? UNP Q53WG9 ? ? 'expression tag' -9 47 1 3QRP ILE A 48 ? UNP Q53WG9 ? ? 'expression tag' -8 48 1 3QRP GLY A 49 ? UNP Q53WG9 ? ? 'expression tag' -7 49 1 3QRP SER A 50 ? UNP Q53WG9 ? ? 'expression tag' -6 50 1 3QRP GLU A 51 ? UNP Q53WG9 ? ? 'expression tag' -5 51 1 3QRP ASN A 52 ? UNP Q53WG9 ? ? 'expression tag' -4 52 1 3QRP LEU A 53 ? UNP Q53WG9 ? ? 'expression tag' -3 53 1 3QRP TYR A 54 ? UNP Q53WG9 ? ? 'expression tag' -2 54 1 3QRP PHE A 55 ? UNP Q53WG9 ? ? 'expression tag' -1 55 1 3QRP GLN A 56 ? UNP Q53WG9 ? ? 'expression tag' 0 56 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3720 ? 1 MORE -38 ? 1 'SSA (A^2)' 13640 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 68 ? ASN A 77 ? SER A 12 ASN A 21 1 ? 10 HELX_P HELX_P2 2 ASN A 77 ? LYS A 87 ? ASN A 21 LYS A 31 1 ? 11 HELX_P HELX_P3 3 VAL A 89 ? GLY A 96 ? VAL A 33 GLY A 40 1 ? 8 HELX_P HELX_P4 4 ASP A 124 ? LEU A 128 ? ASP A 68 LEU A 72 5 ? 5 HELX_P HELX_P5 5 THR A 174 ? GLY A 189 ? THR A 118 GLY A 133 1 ? 16 HELX_P HELX_P6 6 ASP A 240 ? GLY A 251 ? ASP A 184 GLY A 195 1 ? 12 HELX_P HELX_P7 7 GLY A 255 ? GLY A 259 ? GLY A 199 GLY A 203 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B C 8 "O3'" ? ? ? 1_555 B PGP 9 P ? ? B C 11 B PGP 12 1_555 ? ? ? ? ? ? ? 1.597 ? ? hydrog1 hydrog ? ? B U 2 O2 ? ? ? 1_555 B C 3 N4 ? ? B U 5 B C 6 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog2 hydrog ? ? B C 3 N3 ? ? ? 1_555 C G 7 N1 ? ? B C 6 C G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B C 3 N4 ? ? ? 1_555 C G 7 O6 ? ? B C 6 C G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B C 3 O2 ? ? ? 1_555 C G 7 N2 ? ? B C 6 C G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B C 4 N3 ? ? ? 1_555 C G 6 N1 ? ? B C 7 C G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B C 4 N4 ? ? ? 1_555 C G 6 O6 ? ? B C 7 C G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B C 4 O2 ? ? ? 1_555 C G 6 N2 ? ? B C 7 C G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B C 5 N3 ? ? ? 1_555 C G 5 N1 ? ? B C 8 C G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 5 N4 ? ? ? 1_555 C G 5 O6 ? ? B C 8 C G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 5 O2 ? ? ? 1_555 C G 5 N2 ? ? B C 8 C G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B C 6 N3 ? ? ? 1_555 C G 4 N1 ? ? B C 9 C G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B C 6 N4 ? ? ? 1_555 C G 4 O6 ? ? B C 9 C G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B C 6 O2 ? ? ? 1_555 C G 4 N2 ? ? B C 9 C G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B A 7 N1 ? ? ? 1_555 C U 3 N3 ? ? B A 10 C U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B A 7 N6 ? ? ? 1_555 C U 3 O4 ? ? B A 10 C U 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B C 8 N3 ? ? ? 1_555 C G 2 N1 ? ? B C 11 C G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C 8 N4 ? ? ? 1_555 C G 2 O6 ? ? B C 11 C G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B C 8 O2 ? ? ? 1_555 C G 2 N2 ? ? B C 11 C G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 3 ? D ? 4 ? E ? 2 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 101 ? GLU A 105 ? LEU A 45 GLU A 49 A 2 VAL A 114 ? THR A 119 ? VAL A 58 THR A 63 A 3 MET A 57 ? LEU A 64 ? MET A 1 LEU A 8 A 4 ALA A 133 ? VAL A 135 ? ALA A 77 VAL A 79 B 1 LEU A 101 ? GLU A 105 ? LEU A 45 GLU A 49 B 2 VAL A 114 ? THR A 119 ? VAL A 58 THR A 63 B 3 MET A 57 ? LEU A 64 ? MET A 1 LEU A 8 B 4 LYS A 139 ? PHE A 141 ? LYS A 83 PHE A 85 C 1 PHE A 191 ? LEU A 193 ? PHE A 135 LEU A 137 C 2 GLU A 220 ? VAL A 238 ? GLU A 164 VAL A 182 C 3 VAL A 202 ? LYS A 216 ? VAL A 146 LYS A 160 D 1 PHE A 191 ? LEU A 193 ? PHE A 135 LEU A 137 D 2 GLU A 220 ? VAL A 238 ? GLU A 164 VAL A 182 D 3 ARG A 150 ? ALA A 157 ? ARG A 94 ALA A 101 D 4 SER A 264 ? ALA A 266 ? SER A 208 ALA A 210 E 1 ALA A 160 ? ARG A 162 ? ALA A 104 ARG A 106 E 2 ARG A 169 ? ALA A 171 ? ARG A 113 ALA A 115 F 1 GLU A 195 ? GLY A 196 ? GLU A 139 GLY A 140 F 2 GLY A 199 ? PRO A 200 ? GLY A 143 PRO A 144 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 105 ? N GLU A 49 O VAL A 114 ? O VAL A 58 A 2 3 O THR A 119 ? O THR A 63 N TRP A 58 ? N TRP A 2 A 3 4 N VAL A 63 ? N VAL A 7 O GLN A 134 ? O GLN A 78 B 1 2 N GLU A 105 ? N GLU A 49 O VAL A 114 ? O VAL A 58 B 2 3 O THR A 119 ? O THR A 63 N TRP A 58 ? N TRP A 2 B 3 4 N LEU A 59 ? N LEU A 3 O LYS A 139 ? O LYS A 83 C 1 2 N ARG A 192 ? N ARG A 136 O GLU A 237 ? O GLU A 181 C 2 3 O ALA A 229 ? O ALA A 173 N THR A 208 ? N THR A 152 D 1 2 N ARG A 192 ? N ARG A 136 O GLU A 237 ? O GLU A 181 D 2 3 O PHE A 232 ? O PHE A 176 N LEU A 155 ? N LEU A 99 D 3 4 N ARG A 152 ? N ARG A 96 O ALA A 266 ? O ALA A 210 E 1 2 N LYS A 161 ? N LYS A 105 O VAL A 170 ? O VAL A 114 F 1 2 N GLY A 196 ? N GLY A 140 O GLY A 199 ? O GLY A 143 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SO4 _struct_site.pdbx_auth_seq_id 212 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE SO4 A 212' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 PHE A 55 ? PHE A -1 . ? 1_555 ? 2 AC1 7 ARG A 97 ? ARG A 41 . ? 1_555 ? 3 AC1 7 ARG A 249 ? ARG A 193 . ? 1_555 ? 4 AC1 7 ARG A 250 ? ARG A 194 . ? 1_555 ? 5 AC1 7 HOH E . ? HOH A 271 . ? 1_555 ? 6 AC1 7 HOH E . ? HOH A 296 . ? 1_555 ? 7 AC1 7 HOH E . ? HOH A 303 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B C 7 ? ? "C1'" B C 7 ? ? N1 B C 7 ? ? 114.11 108.50 5.61 0.70 N 2 1 "O4'" B C 11 ? ? "C1'" B C 11 ? ? N1 B C 11 ? ? 115.01 108.50 6.51 0.70 N 3 1 "C3'" C U5P 15 ? ? "O3'" C U5P 15 ? ? P C G 16 ? ? 132.62 119.70 12.92 1.20 Y 4 1 "O3'" C U5P 15 ? ? P C G 16 ? ? OP1 C G 16 ? ? 122.27 110.50 11.77 1.10 Y 5 1 "O5'" C G 16 ? ? "C5'" C G 16 ? ? "C4'" C G 16 ? ? 104.13 109.40 -5.27 0.80 N 6 1 "C3'" C G 18 ? ? "C2'" C G 18 ? ? "C1'" C G 18 ? ? 97.09 101.30 -4.21 0.70 N 7 1 "O4'" C G 18 ? ? "C1'" C G 18 ? ? N9 C G 18 ? ? 113.96 108.50 5.46 0.70 N # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 GLU _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 74 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLY _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 75 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -146.56 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id PGP _pdbx_struct_mod_residue.label_seq_id 9 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id PGP _pdbx_struct_mod_residue.auth_seq_id 12 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id G _pdbx_struct_mod_residue.details "GUANOSINE-3',5'-DIPHOSPHATE" # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -8.4810 -15.5740 14.3620 -0.0288 -0.0263 -0.0172 -0.0062 0.0065 -0.0025 0.2797 0.3220 0.4084 0.0215 -0.0625 0.0898 0.0109 -0.0137 0.0028 0.0078 -0.0172 0.0268 0.0180 -0.0126 0.0029 'X-RAY DIFFRACTION' 2 ? refined -11.9300 -16.3000 32.3150 0.0308 -0.0398 -0.0381 -0.0142 0.0089 0.0045 0.9221 0.6842 0.8772 -0.0211 -0.4513 0.4043 0.0170 -0.0382 0.0211 0.0241 -0.0005 0.0881 0.1666 0.0515 -0.0310 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 7 A 219 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 4 B 21 ? . . . . ? # _pdbx_phasing_MR.entry_id 3QRP _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.550 _pdbx_phasing_MR.d_res_low_rotation 32.990 _pdbx_phasing_MR.d_res_high_translation 2.550 _pdbx_phasing_MR.d_res_low_translation 32.990 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -55 ? A MET 1 2 1 Y 1 A HIS -54 ? A HIS 2 3 1 Y 1 A HIS -53 ? A HIS 3 4 1 Y 1 A HIS -52 ? A HIS 4 5 1 Y 1 A HIS -51 ? A HIS 5 6 1 Y 1 A HIS -50 ? A HIS 6 7 1 Y 1 A HIS -49 ? A HIS 7 8 1 Y 1 A SER -48 ? A SER 8 9 1 Y 1 A SER -47 ? A SER 9 10 1 Y 1 A GLY -46 ? A GLY 10 11 1 Y 1 A LEU -45 ? A LEU 11 12 1 Y 1 A VAL -44 ? A VAL 12 13 1 Y 1 A PRO -43 ? A PRO 13 14 1 Y 1 A ARG -42 ? A ARG 14 15 1 Y 1 A GLY -41 ? A GLY 15 16 1 Y 1 A SER -40 ? A SER 16 17 1 Y 1 A GLY -39 ? A GLY 17 18 1 Y 1 A MET -38 ? A MET 18 19 1 Y 1 A LYS -37 ? A LYS 19 20 1 Y 1 A GLU -36 ? A GLU 20 21 1 Y 1 A THR -35 ? A THR 21 22 1 Y 1 A ALA -34 ? A ALA 22 23 1 Y 1 A ALA -33 ? A ALA 23 24 1 Y 1 A ALA -32 ? A ALA 24 25 1 Y 1 A LYS -31 ? A LYS 25 26 1 Y 1 A PHE -30 ? A PHE 26 27 1 Y 1 A GLU -29 ? A GLU 27 28 1 Y 1 A ARG -28 ? A ARG 28 29 1 Y 1 A GLN -27 ? A GLN 29 30 1 Y 1 A HIS -26 ? A HIS 30 31 1 Y 1 A MET -25 ? A MET 31 32 1 Y 1 A ASP -24 ? A ASP 32 33 1 Y 1 A SER -23 ? A SER 33 34 1 Y 1 A PRO -22 ? A PRO 34 35 1 Y 1 A ASP -21 ? A ASP 35 36 1 Y 1 A LEU -20 ? A LEU 36 37 1 Y 1 A GLY -19 ? A GLY 37 38 1 Y 1 A THR -18 ? A THR 38 39 1 Y 1 A ASP -17 ? A ASP 39 40 1 Y 1 A ASP -16 ? A ASP 40 41 1 Y 1 A ASP -15 ? A ASP 41 42 1 Y 1 A ASP -14 ? A ASP 42 43 1 Y 1 A LYS -13 ? A LYS 43 44 1 Y 1 A ALA -12 ? A ALA 44 45 1 Y 1 A MET -11 ? A MET 45 46 1 Y 1 A ALA -10 ? A ALA 46 47 1 Y 1 A ASP -9 ? A ASP 47 48 1 Y 1 A ILE -8 ? A ILE 48 49 1 Y 1 A GLY -7 ? A GLY 49 50 1 Y 1 A SER -6 ? A SER 50 51 1 Y 1 A GLU -5 ? A GLU 51 52 1 Y 1 A ASN -4 ? A ASN 52 53 1 Y 1 A LEU -3 ? A LEU 53 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 G OP3 O N N 146 G P P N N 147 G OP1 O N N 148 G OP2 O N N 149 G "O5'" O N N 150 G "C5'" C N N 151 G "C4'" C N R 152 G "O4'" O N N 153 G "C3'" C N S 154 G "O3'" O N N 155 G "C2'" C N R 156 G "O2'" O N N 157 G "C1'" C N R 158 G N9 N Y N 159 G C8 C Y N 160 G N7 N Y N 161 G C5 C Y N 162 G C6 C N N 163 G O6 O N N 164 G N1 N N N 165 G C2 C N N 166 G N2 N N N 167 G N3 N N N 168 G C4 C Y N 169 G HOP3 H N N 170 G HOP2 H N N 171 G "H5'" H N N 172 G "H5''" H N N 173 G "H4'" H N N 174 G "H3'" H N N 175 G "HO3'" H N N 176 G "H2'" H N N 177 G "HO2'" H N N 178 G "H1'" H N N 179 G H8 H N N 180 G H1 H N N 181 G H21 H N N 182 G H22 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 HOH O O N N 254 HOH H1 H N N 255 HOH H2 H N N 256 ILE N N N N 257 ILE CA C N S 258 ILE C C N N 259 ILE O O N N 260 ILE CB C N S 261 ILE CG1 C N N 262 ILE CG2 C N N 263 ILE CD1 C N N 264 ILE OXT O N N 265 ILE H H N N 266 ILE H2 H N N 267 ILE HA H N N 268 ILE HB H N N 269 ILE HG12 H N N 270 ILE HG13 H N N 271 ILE HG21 H N N 272 ILE HG22 H N N 273 ILE HG23 H N N 274 ILE HD11 H N N 275 ILE HD12 H N N 276 ILE HD13 H N N 277 ILE HXT H N N 278 LEU N N N N 279 LEU CA C N S 280 LEU C C N N 281 LEU O O N N 282 LEU CB C N N 283 LEU CG C N N 284 LEU CD1 C N N 285 LEU CD2 C N N 286 LEU OXT O N N 287 LEU H H N N 288 LEU H2 H N N 289 LEU HA H N N 290 LEU HB2 H N N 291 LEU HB3 H N N 292 LEU HG H N N 293 LEU HD11 H N N 294 LEU HD12 H N N 295 LEU HD13 H N N 296 LEU HD21 H N N 297 LEU HD22 H N N 298 LEU HD23 H N N 299 LEU HXT H N N 300 LYS N N N N 301 LYS CA C N S 302 LYS C C N N 303 LYS O O N N 304 LYS CB C N N 305 LYS CG C N N 306 LYS CD C N N 307 LYS CE C N N 308 LYS NZ N N N 309 LYS OXT O N N 310 LYS H H N N 311 LYS H2 H N N 312 LYS HA H N N 313 LYS HB2 H N N 314 LYS HB3 H N N 315 LYS HG2 H N N 316 LYS HG3 H N N 317 LYS HD2 H N N 318 LYS HD3 H N N 319 LYS HE2 H N N 320 LYS HE3 H N N 321 LYS HZ1 H N N 322 LYS HZ2 H N N 323 LYS HZ3 H N N 324 LYS HXT H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 PGP P1 P N N 346 PGP O4P O N N 347 PGP O5P O N N 348 PGP O6P O N N 349 PGP P P N N 350 PGP OP1 O N N 351 PGP OP2 O N N 352 PGP OP3 O N N 353 PGP "O5'" O N N 354 PGP "C5'" C N N 355 PGP "C4'" C N R 356 PGP "O4'" O N N 357 PGP "C3'" C N S 358 PGP "O3'" O N N 359 PGP "C2'" C N R 360 PGP "O2'" O N N 361 PGP "C1'" C N R 362 PGP N9 N Y N 363 PGP C8 C Y N 364 PGP N7 N Y N 365 PGP C5 C Y N 366 PGP C6 C N N 367 PGP O6 O N N 368 PGP N1 N N N 369 PGP C2 C N N 370 PGP N2 N N N 371 PGP N3 N N N 372 PGP C4 C Y N 373 PGP HOP5 H N N 374 PGP HOP6 H N N 375 PGP HOP2 H N N 376 PGP HOP3 H N N 377 PGP "H5'" H N N 378 PGP "H5''" H N N 379 PGP "H4'" H N N 380 PGP "H3'" H N N 381 PGP "H2'" H N N 382 PGP "HO2'" H N N 383 PGP "H1'" H N N 384 PGP H8 H N N 385 PGP HN1 H N N 386 PGP HN21 H N N 387 PGP HN22 H N N 388 PHE N N N N 389 PHE CA C N S 390 PHE C C N N 391 PHE O O N N 392 PHE CB C N N 393 PHE CG C Y N 394 PHE CD1 C Y N 395 PHE CD2 C Y N 396 PHE CE1 C Y N 397 PHE CE2 C Y N 398 PHE CZ C Y N 399 PHE OXT O N N 400 PHE H H N N 401 PHE H2 H N N 402 PHE HA H N N 403 PHE HB2 H N N 404 PHE HB3 H N N 405 PHE HD1 H N N 406 PHE HD2 H N N 407 PHE HE1 H N N 408 PHE HE2 H N N 409 PHE HZ H N N 410 PHE HXT H N N 411 PRO N N N N 412 PRO CA C N S 413 PRO C C N N 414 PRO O O N N 415 PRO CB C N N 416 PRO CG C N N 417 PRO CD C N N 418 PRO OXT O N N 419 PRO H H N N 420 PRO HA H N N 421 PRO HB2 H N N 422 PRO HB3 H N N 423 PRO HG2 H N N 424 PRO HG3 H N N 425 PRO HD2 H N N 426 PRO HD3 H N N 427 PRO HXT H N N 428 SER N N N N 429 SER CA C N S 430 SER C C N N 431 SER O O N N 432 SER CB C N N 433 SER OG O N N 434 SER OXT O N N 435 SER H H N N 436 SER H2 H N N 437 SER HA H N N 438 SER HB2 H N N 439 SER HB3 H N N 440 SER HG H N N 441 SER HXT H N N 442 SO4 S S N N 443 SO4 O1 O N N 444 SO4 O2 O N N 445 SO4 O3 O N N 446 SO4 O4 O N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 U OP3 O N N 516 U P P N N 517 U OP1 O N N 518 U OP2 O N N 519 U "O5'" O N N 520 U "C5'" C N N 521 U "C4'" C N R 522 U "O4'" O N N 523 U "C3'" C N S 524 U "O3'" O N N 525 U "C2'" C N R 526 U "O2'" O N N 527 U "C1'" C N R 528 U N1 N N N 529 U C2 C N N 530 U O2 O N N 531 U N3 N N N 532 U C4 C N N 533 U O4 O N N 534 U C5 C N N 535 U C6 C N N 536 U HOP3 H N N 537 U HOP2 H N N 538 U "H5'" H N N 539 U "H5''" H N N 540 U "H4'" H N N 541 U "H3'" H N N 542 U "HO3'" H N N 543 U "H2'" H N N 544 U "HO2'" H N N 545 U "H1'" H N N 546 U H3 H N N 547 U H5 H N N 548 U H6 H N N 549 U5P N1 N N N 550 U5P C2 C N N 551 U5P N3 N N N 552 U5P C4 C N N 553 U5P C5 C N N 554 U5P C6 C N N 555 U5P O2 O N N 556 U5P O4 O N N 557 U5P "C1'" C N R 558 U5P "C2'" C N R 559 U5P "O2'" O N N 560 U5P "C3'" C N S 561 U5P "C4'" C N R 562 U5P "O3'" O N N 563 U5P "O4'" O N N 564 U5P "C5'" C N N 565 U5P "O5'" O N N 566 U5P P P N N 567 U5P O1P O N N 568 U5P O2P O N N 569 U5P O3P O N N 570 U5P HN3 H N N 571 U5P H5 H N N 572 U5P H6 H N N 573 U5P "H1'" H N N 574 U5P "H2'" H N N 575 U5P "HO2'" H N N 576 U5P "H3'" H N N 577 U5P "H4'" H N N 578 U5P "HO3'" H N N 579 U5P "H5'1" H N N 580 U5P "H5'2" H N N 581 U5P HOP2 H N N 582 U5P HOP3 H N N 583 VAL N N N N 584 VAL CA C N S 585 VAL C C N N 586 VAL O O N N 587 VAL CB C N N 588 VAL CG1 C N N 589 VAL CG2 C N N 590 VAL OXT O N N 591 VAL H H N N 592 VAL H2 H N N 593 VAL HA H N N 594 VAL HB H N N 595 VAL HG11 H N N 596 VAL HG12 H N N 597 VAL HG13 H N N 598 VAL HG21 H N N 599 VAL HG22 H N N 600 VAL HG23 H N N 601 VAL HXT H N N 602 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 HIS N CA sing N N 231 HIS N H sing N N 232 HIS N H2 sing N N 233 HIS CA C sing N N 234 HIS CA CB sing N N 235 HIS CA HA sing N N 236 HIS C O doub N N 237 HIS C OXT sing N N 238 HIS CB CG sing N N 239 HIS CB HB2 sing N N 240 HIS CB HB3 sing N N 241 HIS CG ND1 sing Y N 242 HIS CG CD2 doub Y N 243 HIS ND1 CE1 doub Y N 244 HIS ND1 HD1 sing N N 245 HIS CD2 NE2 sing Y N 246 HIS CD2 HD2 sing N N 247 HIS CE1 NE2 sing Y N 248 HIS CE1 HE1 sing N N 249 HIS NE2 HE2 sing N N 250 HIS OXT HXT sing N N 251 HOH O H1 sing N N 252 HOH O H2 sing N N 253 ILE N CA sing N N 254 ILE N H sing N N 255 ILE N H2 sing N N 256 ILE CA C sing N N 257 ILE CA CB sing N N 258 ILE CA HA sing N N 259 ILE C O doub N N 260 ILE C OXT sing N N 261 ILE CB CG1 sing N N 262 ILE CB CG2 sing N N 263 ILE CB HB sing N N 264 ILE CG1 CD1 sing N N 265 ILE CG1 HG12 sing N N 266 ILE CG1 HG13 sing N N 267 ILE CG2 HG21 sing N N 268 ILE CG2 HG22 sing N N 269 ILE CG2 HG23 sing N N 270 ILE CD1 HD11 sing N N 271 ILE CD1 HD12 sing N N 272 ILE CD1 HD13 sing N N 273 ILE OXT HXT sing N N 274 LEU N CA sing N N 275 LEU N H sing N N 276 LEU N H2 sing N N 277 LEU CA C sing N N 278 LEU CA CB sing N N 279 LEU CA HA sing N N 280 LEU C O doub N N 281 LEU C OXT sing N N 282 LEU CB CG sing N N 283 LEU CB HB2 sing N N 284 LEU CB HB3 sing N N 285 LEU CG CD1 sing N N 286 LEU CG CD2 sing N N 287 LEU CG HG sing N N 288 LEU CD1 HD11 sing N N 289 LEU CD1 HD12 sing N N 290 LEU CD1 HD13 sing N N 291 LEU CD2 HD21 sing N N 292 LEU CD2 HD22 sing N N 293 LEU CD2 HD23 sing N N 294 LEU OXT HXT sing N N 295 LYS N CA sing N N 296 LYS N H sing N N 297 LYS N H2 sing N N 298 LYS CA C sing N N 299 LYS CA CB sing N N 300 LYS CA HA sing N N 301 LYS C O doub N N 302 LYS C OXT sing N N 303 LYS CB CG sing N N 304 LYS CB HB2 sing N N 305 LYS CB HB3 sing N N 306 LYS CG CD sing N N 307 LYS CG HG2 sing N N 308 LYS CG HG3 sing N N 309 LYS CD CE sing N N 310 LYS CD HD2 sing N N 311 LYS CD HD3 sing N N 312 LYS CE NZ sing N N 313 LYS CE HE2 sing N N 314 LYS CE HE3 sing N N 315 LYS NZ HZ1 sing N N 316 LYS NZ HZ2 sing N N 317 LYS NZ HZ3 sing N N 318 LYS OXT HXT sing N N 319 MET N CA sing N N 320 MET N H sing N N 321 MET N H2 sing N N 322 MET CA C sing N N 323 MET CA CB sing N N 324 MET CA HA sing N N 325 MET C O doub N N 326 MET C OXT sing N N 327 MET CB CG sing N N 328 MET CB HB2 sing N N 329 MET CB HB3 sing N N 330 MET CG SD sing N N 331 MET CG HG2 sing N N 332 MET CG HG3 sing N N 333 MET SD CE sing N N 334 MET CE HE1 sing N N 335 MET CE HE2 sing N N 336 MET CE HE3 sing N N 337 MET OXT HXT sing N N 338 PGP P1 O4P doub N N 339 PGP P1 O5P sing N N 340 PGP P1 O6P sing N N 341 PGP P1 "O3'" sing N N 342 PGP O5P HOP5 sing N N 343 PGP O6P HOP6 sing N N 344 PGP P OP1 doub N N 345 PGP P OP2 sing N N 346 PGP P OP3 sing N N 347 PGP P "O5'" sing N N 348 PGP OP2 HOP2 sing N N 349 PGP OP3 HOP3 sing N N 350 PGP "O5'" "C5'" sing N N 351 PGP "C5'" "C4'" sing N N 352 PGP "C5'" "H5'" sing N N 353 PGP "C5'" "H5''" sing N N 354 PGP "C4'" "O4'" sing N N 355 PGP "C4'" "C3'" sing N N 356 PGP "C4'" "H4'" sing N N 357 PGP "O4'" "C1'" sing N N 358 PGP "C3'" "O3'" sing N N 359 PGP "C3'" "C2'" sing N N 360 PGP "C3'" "H3'" sing N N 361 PGP "C2'" "O2'" sing N N 362 PGP "C2'" "C1'" sing N N 363 PGP "C2'" "H2'" sing N N 364 PGP "O2'" "HO2'" sing N N 365 PGP "C1'" N9 sing N N 366 PGP "C1'" "H1'" sing N N 367 PGP N9 C8 sing Y N 368 PGP N9 C4 sing Y N 369 PGP C8 N7 doub Y N 370 PGP C8 H8 sing N N 371 PGP N7 C5 sing Y N 372 PGP C5 C6 sing N N 373 PGP C5 C4 doub Y N 374 PGP C6 O6 doub N N 375 PGP C6 N1 sing N N 376 PGP N1 C2 sing N N 377 PGP N1 HN1 sing N N 378 PGP C2 N2 sing N N 379 PGP C2 N3 doub N N 380 PGP N2 HN21 sing N N 381 PGP N2 HN22 sing N N 382 PGP N3 C4 sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 SO4 S O1 doub N N 437 SO4 S O2 doub N N 438 SO4 S O3 sing N N 439 SO4 S O4 sing N N 440 THR N CA sing N N 441 THR N H sing N N 442 THR N H2 sing N N 443 THR CA C sing N N 444 THR CA CB sing N N 445 THR CA HA sing N N 446 THR C O doub N N 447 THR C OXT sing N N 448 THR CB OG1 sing N N 449 THR CB CG2 sing N N 450 THR CB HB sing N N 451 THR OG1 HG1 sing N N 452 THR CG2 HG21 sing N N 453 THR CG2 HG22 sing N N 454 THR CG2 HG23 sing N N 455 THR OXT HXT sing N N 456 TRP N CA sing N N 457 TRP N H sing N N 458 TRP N H2 sing N N 459 TRP CA C sing N N 460 TRP CA CB sing N N 461 TRP CA HA sing N N 462 TRP C O doub N N 463 TRP C OXT sing N N 464 TRP CB CG sing N N 465 TRP CB HB2 sing N N 466 TRP CB HB3 sing N N 467 TRP CG CD1 doub Y N 468 TRP CG CD2 sing Y N 469 TRP CD1 NE1 sing Y N 470 TRP CD1 HD1 sing N N 471 TRP CD2 CE2 doub Y N 472 TRP CD2 CE3 sing Y N 473 TRP NE1 CE2 sing Y N 474 TRP NE1 HE1 sing N N 475 TRP CE2 CZ2 sing Y N 476 TRP CE3 CZ3 doub Y N 477 TRP CE3 HE3 sing N N 478 TRP CZ2 CH2 doub Y N 479 TRP CZ2 HZ2 sing N N 480 TRP CZ3 CH2 sing Y N 481 TRP CZ3 HZ3 sing N N 482 TRP CH2 HH2 sing N N 483 TRP OXT HXT sing N N 484 TYR N CA sing N N 485 TYR N H sing N N 486 TYR N H2 sing N N 487 TYR CA C sing N N 488 TYR CA CB sing N N 489 TYR CA HA sing N N 490 TYR C O doub N N 491 TYR C OXT sing N N 492 TYR CB CG sing N N 493 TYR CB HB2 sing N N 494 TYR CB HB3 sing N N 495 TYR CG CD1 doub Y N 496 TYR CG CD2 sing Y N 497 TYR CD1 CE1 sing Y N 498 TYR CD1 HD1 sing N N 499 TYR CD2 CE2 doub Y N 500 TYR CD2 HD2 sing N N 501 TYR CE1 CZ doub Y N 502 TYR CE1 HE1 sing N N 503 TYR CE2 CZ sing Y N 504 TYR CE2 HE2 sing N N 505 TYR CZ OH sing N N 506 TYR OH HH sing N N 507 TYR OXT HXT sing N N 508 U OP3 P sing N N 509 U OP3 HOP3 sing N N 510 U P OP1 doub N N 511 U P OP2 sing N N 512 U P "O5'" sing N N 513 U OP2 HOP2 sing N N 514 U "O5'" "C5'" sing N N 515 U "C5'" "C4'" sing N N 516 U "C5'" "H5'" sing N N 517 U "C5'" "H5''" sing N N 518 U "C4'" "O4'" sing N N 519 U "C4'" "C3'" sing N N 520 U "C4'" "H4'" sing N N 521 U "O4'" "C1'" sing N N 522 U "C3'" "O3'" sing N N 523 U "C3'" "C2'" sing N N 524 U "C3'" "H3'" sing N N 525 U "O3'" "HO3'" sing N N 526 U "C2'" "O2'" sing N N 527 U "C2'" "C1'" sing N N 528 U "C2'" "H2'" sing N N 529 U "O2'" "HO2'" sing N N 530 U "C1'" N1 sing N N 531 U "C1'" "H1'" sing N N 532 U N1 C2 sing N N 533 U N1 C6 sing N N 534 U C2 O2 doub N N 535 U C2 N3 sing N N 536 U N3 C4 sing N N 537 U N3 H3 sing N N 538 U C4 O4 doub N N 539 U C4 C5 sing N N 540 U C5 C6 doub N N 541 U C5 H5 sing N N 542 U C6 H6 sing N N 543 U5P N1 C2 sing N N 544 U5P N1 C6 sing N N 545 U5P N1 "C1'" sing N N 546 U5P C2 N3 sing N N 547 U5P C2 O2 doub N N 548 U5P N3 C4 sing N N 549 U5P N3 HN3 sing N N 550 U5P C4 C5 sing N N 551 U5P C4 O4 doub N N 552 U5P C5 C6 doub N N 553 U5P C5 H5 sing N N 554 U5P C6 H6 sing N N 555 U5P "C1'" "C2'" sing N N 556 U5P "C1'" "O4'" sing N N 557 U5P "C1'" "H1'" sing N N 558 U5P "C2'" "O2'" sing N N 559 U5P "C2'" "C3'" sing N N 560 U5P "C2'" "H2'" sing N N 561 U5P "O2'" "HO2'" sing N N 562 U5P "C3'" "C4'" sing N N 563 U5P "C3'" "O3'" sing N N 564 U5P "C3'" "H3'" sing N N 565 U5P "C4'" "O4'" sing N N 566 U5P "C4'" "C5'" sing N N 567 U5P "C4'" "H4'" sing N N 568 U5P "O3'" "HO3'" sing N N 569 U5P "C5'" "O5'" sing N N 570 U5P "C5'" "H5'1" sing N N 571 U5P "C5'" "H5'2" sing N N 572 U5P "O5'" P sing N N 573 U5P P O1P doub N N 574 U5P P O2P sing N N 575 U5P P O3P sing N N 576 U5P O2P HOP2 sing N N 577 U5P O3P HOP3 sing N N 578 VAL N CA sing N N 579 VAL N H sing N N 580 VAL N H2 sing N N 581 VAL CA C sing N N 582 VAL CA CB sing N N 583 VAL CA HA sing N N 584 VAL C O doub N N 585 VAL C OXT sing N N 586 VAL CB CG1 sing N N 587 VAL CB CG2 sing N N 588 VAL CB HB sing N N 589 VAL CG1 HG11 sing N N 590 VAL CG1 HG12 sing N N 591 VAL CG1 HG13 sing N N 592 VAL CG2 HG21 sing N N 593 VAL CG2 HG22 sing N N 594 VAL CG2 HG23 sing N N 595 VAL OXT HXT sing N N 596 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3QRP 'a-form double helix' 3QRP 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B C 3 1_555 C G 7 1_555 0.223 -0.076 -0.271 3.680 -2.190 3.322 1 B_C6:G21_C B 6 ? C 21 ? 19 1 1 B C 4 1_555 C G 6 1_555 0.364 -0.063 -0.207 14.604 -6.953 1.077 2 B_C7:G20_C B 7 ? C 20 ? 19 1 1 B C 5 1_555 C G 5 1_555 0.141 -0.216 -0.246 10.640 -11.929 1.964 3 B_C8:G19_C B 8 ? C 19 ? 19 1 1 B C 6 1_555 C G 4 1_555 0.188 -0.101 0.263 -2.126 -7.466 3.473 4 B_C9:G18_C B 9 ? C 18 ? 19 1 1 B A 7 1_555 C U 3 1_555 0.268 0.007 0.319 9.891 -11.486 4.882 5 B_A10:U17_C B 10 ? C 17 ? 20 1 1 B C 8 1_555 C G 2 1_555 0.581 0.029 -0.532 28.588 -5.185 2.583 6 B_C11:G16_C B 11 ? C 16 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B C 3 1_555 C G 7 1_555 B C 4 1_555 C G 6 1_555 -0.683 -2.600 3.179 -3.707 0.305 22.658 -6.640 0.428 3.213 0.771 9.354 22.957 1 BB_C6C7:G20G21_CC B 6 ? C 21 ? B 7 ? C 20 ? 1 B C 4 1_555 C G 6 1_555 B C 5 1_555 C G 5 1_555 -0.335 -1.899 3.324 -1.597 6.332 31.467 -4.525 0.330 2.909 11.521 2.905 32.121 2 BB_C7C8:G19G20_CC B 7 ? C 20 ? B 8 ? C 19 ? 1 B C 5 1_555 C G 5 1_555 B C 6 1_555 C G 4 1_555 -0.278 -1.830 3.509 -3.148 9.071 34.021 -4.368 -0.011 2.952 15.133 5.251 35.312 3 BB_C8C9:G18G19_CC B 8 ? C 19 ? B 9 ? C 18 ? 1 B C 6 1_555 C G 4 1_555 B A 7 1_555 C U 3 1_555 -0.772 -1.596 2.830 -2.395 9.345 25.021 -5.359 1.176 2.167 20.618 5.285 26.789 4 BB_C9A10:U17G18_CC B 9 ? C 18 ? B 10 ? C 17 ? 1 B A 7 1_555 C U 3 1_555 B C 8 1_555 C G 2 1_555 0.614 -1.226 3.068 3.648 1.129 29.529 -2.610 -0.477 3.072 2.204 -7.120 29.769 5 BB_A10C11:G16U17_CC B 10 ? C 17 ? B 11 ? C 16 ? # _atom_sites.entry_id 3QRP _atom_sites.fract_transf_matrix[1][1] 0.026985 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013811 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009978 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_