HEADER VIRAL PROTEIN/DE NOVO PROTEIN 14-MAR-11 3R2X TITLE CRYSTAL STRUCTURE OF THE DE NOVO DESIGNED BINDING PROTEIN HB36.3 IN TITLE 2 COMPLEX THE THE 1918 INFLUENZA VIRUS HEMAGGLUTININ COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HA1 CHAIN (UNP RESIDUES 18-344); COMPND 5 SYNONYM: 1918 HEMAGGLUTININ RECEPTOR BINDING DOMAIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HEMAGGLUTININ; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: HA2 CHAIN (UNP RESIDUES 345-520); COMPND 11 SYNONYM: 1918 HEMAGGLUTININ FUSION SUBUNIT; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: HB36.3, DESIGNED HEMAGGLUTININ BINDING PROTEIN; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 88776; SOURCE 4 STRAIN: A/SOUTH CAROLINA/1/1918 (H1N1); SOURCE 5 GENE: HA, HEMAGGLUTININ; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HIGH FIVE; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 13 ORGANISM_TAXID: 88776; SOURCE 14 STRAIN: A/SOUTH CAROLINA/1/1918 (H1N1); SOURCE 15 GENE: HA, HEMAGGLUTININ; SOURCE 16 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 17 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 19 EXPRESSION_SYSTEM_STRAIN: HIGH FIVE; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 21 MOL_ID: 3; SOURCE 22 ORGANISM_SCIENTIFIC: ARTIFICIAL GENE; SOURCE 23 ORGANISM_TAXID: 32630; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 26 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (BL21/DE3); SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS HEMAGGLUTININ, GLYCOPROTEIN, VIRAL PROTEIN-DE NOVO PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.C.EKIERT,I.A.WILSON REVDAT 3 29-JUL-20 3R2X 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 25-MAY-11 3R2X 1 JRNL REVDAT 1 11-MAY-11 3R2X 0 JRNL AUTH S.J.FLEISHMAN,T.A.WHITEHEAD,D.C.EKIERT,C.DREYFUS,J.E.CORN, JRNL AUTH 2 E.M.STRAUCH,I.A.WILSON,D.BAKER JRNL TITL COMPUTATIONAL DESIGN OF PROTEINS TARGETING THE CONSERVED JRNL TITL 2 STEM REGION OF INFLUENZA HEMAGGLUTININ. JRNL REF SCIENCE V. 332 816 2011 JRNL REFN ISSN 0036-8075 JRNL PMID 21566186 JRNL DOI 10.1126/SCIENCE.1202617 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 18838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7500 - 5.9265 0.99 2679 128 0.2182 0.2318 REMARK 3 2 5.9265 - 4.7056 1.00 2599 132 0.1833 0.2324 REMARK 3 3 4.7056 - 4.1112 1.00 2536 154 0.1695 0.1886 REMARK 3 4 4.1112 - 3.7355 1.00 2550 123 0.2201 0.2794 REMARK 3 5 3.7355 - 3.4679 1.00 2521 136 0.2900 0.3212 REMARK 3 6 3.4679 - 3.2635 1.00 2515 132 0.3645 0.3658 REMARK 3 7 3.2635 - 3.1001 0.99 2483 150 0.3999 0.4273 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 96.87 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 118.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.72260 REMARK 3 B22 (A**2) : -6.72260 REMARK 3 B33 (A**2) : 13.44510 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 4728 REMARK 3 ANGLE : 1.795 6413 REMARK 3 CHIRALITY : 0.093 700 REMARK 3 PLANARITY : 0.009 824 REMARK 3 DIHEDRAL : 17.176 1730 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -45.6700 44.6776 5.0683 REMARK 3 T TENSOR REMARK 3 T11: 0.7605 T22: 1.0577 REMARK 3 T33: 1.2831 T12: -0.0949 REMARK 3 T13: 0.0354 T23: 0.1162 REMARK 3 L TENSOR REMARK 3 L11: 1.6124 L22: 2.0399 REMARK 3 L33: 5.6349 L12: 0.3233 REMARK 3 L13: -0.4931 L23: 0.6187 REMARK 3 S TENSOR REMARK 3 S11: -0.2854 S12: 0.2376 S13: 0.0786 REMARK 3 S21: -0.3486 S22: 0.1534 S23: -0.4313 REMARK 3 S31: 0.0851 S32: 0.6758 S33: -1.3912 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -52.9572 40.6992 57.5320 REMARK 3 T TENSOR REMARK 3 T11: 1.5328 T22: 1.6502 REMARK 3 T33: 1.2727 T12: -0.0355 REMARK 3 T13: -0.3037 T23: -0.0415 REMARK 3 L TENSOR REMARK 3 L11: 1.1184 L22: 0.6397 REMARK 3 L33: 0.9767 L12: 0.0247 REMARK 3 L13: 0.8934 L23: -0.4176 REMARK 3 S TENSOR REMARK 3 S11: -0.1511 S12: -0.8021 S13: 0.2594 REMARK 3 S21: 0.6663 S22: -0.2352 S23: -0.2837 REMARK 3 S31: -0.2224 S32: -0.1067 S33: 0.1484 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -31.3377 40.5762 46.8611 REMARK 3 T TENSOR REMARK 3 T11: 1.3814 T22: 1.9723 REMARK 3 T33: 1.8548 T12: 0.1295 REMARK 3 T13: -0.3772 T23: 0.3356 REMARK 3 L TENSOR REMARK 3 L11: 1.4391 L22: 1.4861 REMARK 3 L33: 2.1105 L12: -0.4835 REMARK 3 L13: -0.4486 L23: 0.1156 REMARK 3 S TENSOR REMARK 3 S11: -0.6859 S12: -0.4131 S13: 0.0463 REMARK 3 S21: 0.0212 S22: 0.2848 S23: -0.7393 REMARK 3 S31: 0.4245 S32: 1.0088 S33: 0.3055 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3R2X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064421. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 70 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, XPREP REMARK 200 DATA SCALING SOFTWARE : XPREP REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19208 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.22000 REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.84000 REMARK 200 FOR SHELL : 2.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG8000, 200 MM MAGNESIUM REMARK 280 CHLORIDE, 100MM TRIS, PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 65.02700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 37.54336 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 104.57833 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 65.02700 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 37.54336 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 104.57833 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 65.02700 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 37.54336 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 104.57833 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 65.02700 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 37.54336 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 104.57833 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 65.02700 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 37.54336 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 104.57833 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 65.02700 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 37.54336 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 104.57833 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 75.08671 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 209.15667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 75.08671 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 209.15667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 75.08671 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 209.15667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 75.08671 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 209.15667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 75.08671 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 209.15667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 75.08671 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 209.15667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: NONAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: NONAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 36240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 70580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -149.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -65.02700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 112.63007 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -130.05400 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 7 REMARK 465 ASP A 8 REMARK 465 PRO A 9 REMARK 465 GLY A 10 REMARK 465 SER A 325 REMARK 465 ILE A 326 REMARK 465 GLN A 327 REMARK 465 SER A 328 REMARK 465 ARG A 329 REMARK 465 GLU B 172 REMARK 465 ILE B 173 REMARK 465 ASP B 174 REMARK 465 GLY B 175 REMARK 465 VAL B 176 REMARK 465 SER B 177 REMARK 465 GLY B 178 REMARK 465 ARG B 179 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ASN C 3 REMARK 465 ALA C 4 REMARK 465 MET C 5 REMARK 465 SER C 88 REMARK 465 PRO C 89 REMARK 465 LEU C 90 REMARK 465 PRO C 91 REMARK 465 LEU C 92 REMARK 465 GLU C 93 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 83 -27.86 -143.12 REMARK 500 GLN A 196 -50.80 70.50 REMARK 500 ASP A 199 32.21 -98.56 REMARK 500 ASP A 225 -3.28 83.61 REMARK 500 LYS B 127 -127.72 65.55 REMARK 500 ASP C 22 61.45 39.43 REMARK 500 REMARK 500 REMARK: NULL DBREF 3R2X A 11 329 UNP Q9WFX3 HEMA_I18A0 18 344 DBREF 3R2X B 1 176 UNP Q9WFX3 HEMA_I18A0 345 520 DBREF 3R2X C 1 93 PDB 3R2X 3R2X 1 93 SEQADV 3R2X ALA A 7 UNP Q9WFX3 EXPRESSION TAG SEQADV 3R2X ASP A 8 UNP Q9WFX3 EXPRESSION TAG SEQADV 3R2X PRO A 9 UNP Q9WFX3 EXPRESSION TAG SEQADV 3R2X GLY A 10 UNP Q9WFX3 EXPRESSION TAG SEQADV 3R2X SER B 177 UNP Q9WFX3 EXPRESSION TAG SEQADV 3R2X GLY B 178 UNP Q9WFX3 EXPRESSION TAG SEQADV 3R2X ARG B 179 UNP Q9WFX3 EXPRESSION TAG SEQRES 1 A 331 ALA ASP PRO GLY ASP THR ILE CYS ILE GLY TYR HIS ALA SEQRES 2 A 331 ASN ASN SER THR ASP THR VAL ASP THR VAL LEU GLU LYS SEQRES 3 A 331 ASN VAL THR VAL THR HIS SER VAL ASN LEU LEU GLU ASP SEQRES 4 A 331 SER HIS ASN GLY LYS LEU CYS LYS LEU LYS GLY ILE ALA SEQRES 5 A 331 PRO LEU GLN LEU GLY LYS CYS ASN ILE ALA GLY TRP LEU SEQRES 6 A 331 LEU GLY ASN PRO GLU CYS ASP LEU LEU LEU THR ALA SER SEQRES 7 A 331 SER TRP SER TYR ILE VAL GLU THR SER ASN SER GLU ASN SEQRES 8 A 331 GLY THR CYS TYR PRO GLY ASP PHE ILE ASP TYR GLU GLU SEQRES 9 A 331 LEU ARG GLU GLN LEU SER SER VAL SER SER PHE GLU LYS SEQRES 10 A 331 PHE GLU ILE PHE PRO LYS THR SER SER TRP PRO ASN HIS SEQRES 11 A 331 GLU THR THR LYS GLY VAL THR ALA ALA CYS SER TYR ALA SEQRES 12 A 331 GLY ALA SER SER PHE TYR ARG ASN LEU LEU TRP LEU THR SEQRES 13 A 331 LYS LYS GLY SER SER TYR PRO LYS LEU SER LYS SER TYR SEQRES 14 A 331 VAL ASN ASN LYS GLY LYS GLU VAL LEU VAL LEU TRP GLY SEQRES 15 A 331 VAL HIS HIS PRO PRO THR GLY THR ASP GLN GLN SER LEU SEQRES 16 A 331 TYR GLN ASN ALA ASP ALA TYR VAL SER VAL GLY SER SER SEQRES 17 A 331 LYS TYR ASN ARG ARG PHE THR PRO GLU ILE ALA ALA ARG SEQRES 18 A 331 PRO LYS VAL ARG ASP GLN ALA GLY ARG MET ASN TYR TYR SEQRES 19 A 331 TRP THR LEU LEU GLU PRO GLY ASP THR ILE THR PHE GLU SEQRES 20 A 331 ALA THR GLY ASN LEU ILE ALA PRO TRP TYR ALA PHE ALA SEQRES 21 A 331 LEU ASN ARG GLY SER GLY SER GLY ILE ILE THR SER ASP SEQRES 22 A 331 ALA PRO VAL HIS ASP CYS ASN THR LYS CYS GLN THR PRO SEQRES 23 A 331 HIS GLY ALA ILE ASN SER SER LEU PRO PHE GLN ASN ILE SEQRES 24 A 331 HIS PRO VAL THR ILE GLY GLU CYS PRO LYS TYR VAL ARG SEQRES 25 A 331 SER THR LYS LEU ARG MET ALA THR GLY LEU ARG ASN ILE SEQRES 26 A 331 PRO SER ILE GLN SER ARG SEQRES 1 B 179 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 B 179 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 B 179 GLN ASN GLU GLN GLY SER GLY TYR ALA ALA ASP GLN LYS SEQRES 4 B 179 SER THR GLN ASN ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 B 179 ASN SER VAL ILE GLU LYS MET ASN THR GLN PHE THR ALA SEQRES 6 B 179 VAL GLY LYS GLU PHE ASN ASN LEU GLU ARG ARG ILE GLU SEQRES 7 B 179 ASN LEU ASN LYS LYS VAL ASP ASP GLY PHE LEU ASP ILE SEQRES 8 B 179 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 B 179 GLU ARG THR LEU ASP PHE HIS ASP SER ASN VAL ARG ASN SEQRES 10 B 179 LEU TYR GLU LYS VAL LYS SER GLN LEU LYS ASN ASN ALA SEQRES 11 B 179 LYS GLU ILE GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS SEQRES 12 B 179 CYS ASP ASP ALA CYS MET GLU SER VAL ARG ASN GLY THR SEQRES 13 B 179 TYR ASP TYR PRO LYS TYR SER GLU GLU SER LYS LEU ASN SEQRES 14 B 179 ARG GLU GLU ILE ASP GLY VAL SER GLY ARG SEQRES 1 C 93 MET SER ASN ALA MET ASP GLY GLN GLN LEU ASN ARG LEU SEQRES 2 C 93 LEU LEU GLU TRP ILE GLY ALA TRP ASP PRO PHE GLY LEU SEQRES 3 C 93 GLY LYS ASP ALA TYR ASP VAL GLU ALA GLU ALA VAL LEU SEQRES 4 C 93 GLN ALA VAL TYR GLU THR GLU SER ALA PHE ASP LEU ALA SEQRES 5 C 93 MET ARG ILE MET TRP ILE TYR VAL PHE ALA PHE ASN ARG SEQRES 6 C 93 PRO ILE PRO PHE PRO HIS ALA GLN LYS LEU ALA ARG ARG SEQRES 7 C 93 LEU LEU GLU LEU LYS GLN ALA ALA SER SER PRO LEU PRO SEQRES 8 C 93 LEU GLU MODRES 3R2X ASN A 33 ASN GLYCOSYLATION SITE MODRES 3R2X ASN A 95 ASN GLYCOSYLATION SITE HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG A 501 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE FORMUL 4 NAG 3(C8 H15 N O6) FORMUL 4 BMA C6 H12 O6 FORMUL 4 MAN C6 H12 O6 HELIX 1 1 ASN A 65 GLY A 72 1 8 HELIX 2 2 ASN A 73 LEU A 80 5 8 HELIX 3 3 ASP A 104 SER A 113 1 10 HELIX 4 4 THR A 187 GLN A 196 1 10 HELIX 5 5 ASP B 37 LYS B 58 1 22 HELIX 6 6 GLU B 74 LYS B 127 1 54 HELIX 7 7 ASP B 145 ASN B 154 1 10 HELIX 8 8 ASP B 158 GLU B 171 1 14 HELIX 9 9 ASP C 6 ASP C 22 1 17 HELIX 10 10 GLY C 27 ALA C 30 5 4 HELIX 11 11 TYR C 31 TYR C 43 1 13 HELIX 12 12 SER C 47 ASN C 64 1 18 HELIX 13 13 PRO C 68 SER C 87 1 20 SHEET 1 A 5 TYR B 34 ALA B 36 0 SHEET 2 A 5 TYR B 22 GLN B 27 -1 N TYR B 24 O ALA B 35 SHEET 3 A 5 THR A 12 TYR A 17 -1 N THR A 12 O GLN B 27 SHEET 4 A 5 CYS B 137 PHE B 140 -1 O PHE B 138 N ILE A 13 SHEET 5 A 5 ALA B 130 GLU B 132 -1 N LYS B 131 O GLU B 139 SHEET 1 B 2 THR A 25 VAL A 26 0 SHEET 2 B 2 VAL A 34 THR A 35 -1 O VAL A 34 N VAL A 26 SHEET 1 C 2 SER A 39 ASN A 41 0 SHEET 2 C 2 ARG A 315 ALA A 317 -1 O MET A 316 N VAL A 40 SHEET 1 D 3 LEU A 43 GLU A 44 0 SHEET 2 D 3 PHE A 294 GLN A 295 1 O PHE A 294 N GLU A 44 SHEET 3 D 3 LYS A 307 TYR A 308 1 O LYS A 307 N GLN A 295 SHEET 1 E 2 LEU A 51 LYS A 53 0 SHEET 2 E 2 VAL A 274 ASN A 278 1 O HIS A 275 N LEU A 51 SHEET 1 F 3 LEU A 59 GLY A 62 0 SHEET 2 F 3 ILE A 87 GLU A 89 1 O VAL A 88 N LEU A 59 SHEET 3 F 3 ILE A 267 THR A 269 1 O ILE A 268 N ILE A 87 SHEET 1 G 5 VAL A 115 GLU A 122 0 SHEET 2 G 5 TYR A 256 ARG A 262 -1 O ASN A 261 N SER A 117 SHEET 3 G 5 VAL A 176 HIS A 184 -1 N LEU A 177 O PHE A 258 SHEET 4 G 5 LEU A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 5 G 5 LEU A 151 TRP A 153 -1 N LEU A 152 O ALA A 253 SHEET 1 H 4 VAL A 115 GLU A 122 0 SHEET 2 H 4 TYR A 256 ARG A 262 -1 O ASN A 261 N SER A 117 SHEET 3 H 4 VAL A 176 HIS A 184 -1 N LEU A 177 O PHE A 258 SHEET 4 H 4 ARG A 229 LEU A 237 -1 O LEU A 237 N VAL A 176 SHEET 1 I 2 THR A 136 TYR A 141 0 SHEET 2 I 2 ALA A 144 SER A 146 -1 O SER A 146 N THR A 136 SHEET 1 J 4 LEU A 164 VAL A 169 0 SHEET 2 J 4 THR A 242 ALA A 247 -1 O PHE A 245 N LYS A 166 SHEET 3 J 4 VAL A 202 GLY A 205 -1 N SER A 203 O GLU A 246 SHEET 4 J 4 ASN A 210 PHE A 213 -1 O PHE A 213 N VAL A 202 SHEET 1 K 3 ALA A 287 ILE A 288 0 SHEET 2 K 3 CYS A 281 GLN A 282 -1 N CYS A 281 O ILE A 288 SHEET 3 K 3 ILE A 302 GLY A 303 -1 O ILE A 302 N GLN A 282 SSBOND 1 CYS A 14 CYS B 137 1555 1555 2.04 SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.04 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.05 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.08 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.08 SSBOND 6 CYS B 144 CYS B 148 1555 1555 2.04 LINK ND2 ASN A 33 C1 NAG A 501 1555 1555 1.46 LINK ND2 ASN A 95 C1 NAG D 1 1555 1555 1.46 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.46 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.44 CRYST1 130.054 130.054 313.735 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007689 0.004439 0.000000 0.00000 SCALE2 0.000000 0.008879 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003187 0.00000