HEADER TRANSFERASE 15-MAR-11 3R38 TITLE 2.23 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF UDP-N-ACETYLGLUCOSAMINE TITLE 2 1-CARBOXYVINYLTRANSFERASE (MURA) FROM LISTERIA MONOCYTOGENES EGD-E COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENOYLPYRUVATE TRANSFERASE 1, UDP-N-ACETYLGLUCOSAMINE COMPND 5 ENOLPYRUVYL TRANSFERASE 1, EPT 1; COMPND 6 EC: 2.5.1.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 STRAIN: EGD-E; SOURCE 5 GENE: LMO2526, MURA, MURA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS BIOSYNTHESIS AND DEGRADATION OF MUREIN SACCULUS AND PEPTIDOGLYCAN, KEYWDS 2 INFECTIOUS DISEASES, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS OF INFECTIOUS DISEASES, CSGID, ADDS ENOLPYRUVYL TO UDP-N- KEYWDS 4 ACETYLGLUCOSAMINE AS A COMPONENT OF CELL WALL FORMATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.S.HALAVATY,G.MINASOV,L.SHUVALOVA,I.DUBROVSKA,J.WINSOR,S.PETERSON, AUTHOR 2 W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 3 13-SEP-23 3R38 1 REMARK SEQADV REVDAT 2 08-NOV-17 3R38 1 REMARK REVDAT 1 23-MAR-11 3R38 0 JRNL AUTH A.S.HALAVATY,G.MINASOV,L.SHUVALOVA,I.DUBROVSKA,J.WINSOR, JRNL AUTH 2 S.PETERSON,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL 2.23 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF JRNL TITL 2 UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE (MURA) JRNL TITL 3 FROM LISTERIA MONOCYTOGENES EGD-E JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 25035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1328 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.23 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.29 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1553 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.3860 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3283 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 184 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.86000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : 3.26000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.73000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.259 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.206 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.160 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.840 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3434 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2243 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4662 ; 1.328 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5533 ; 0.769 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 450 ; 0.960 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 136 ;17.709 ;25.147 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 609 ; 5.307 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ; 5.724 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 550 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3817 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 622 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2209 ; 0.818 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 911 ; 0.199 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3568 ; 1.597 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1225 ; 2.921 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1094 ; 4.806 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -9 A 24 REMARK 3 ORIGIN FOR THE GROUP (A): 19.1133 28.0890 17.6274 REMARK 3 T TENSOR REMARK 3 T11: 0.0874 T22: 0.0486 REMARK 3 T33: 0.1098 T12: 0.0008 REMARK 3 T13: -0.0187 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 2.0744 L22: 1.2838 REMARK 3 L33: 1.4860 L12: -0.6670 REMARK 3 L13: -0.0815 L23: -0.5725 REMARK 3 S TENSOR REMARK 3 S11: 0.0093 S12: 0.1927 S13: -0.4134 REMARK 3 S21: -0.1161 S22: -0.1630 S23: 0.0344 REMARK 3 S31: -0.0096 S32: 0.1427 S33: 0.1537 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 231 REMARK 3 ORIGIN FOR THE GROUP (A): 3.8272 36.3083 39.9335 REMARK 3 T TENSOR REMARK 3 T11: 0.0479 T22: 0.0106 REMARK 3 T33: 0.0545 T12: -0.0139 REMARK 3 T13: 0.0341 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.8783 L22: 1.0855 REMARK 3 L33: 1.3987 L12: -0.2035 REMARK 3 L13: 0.2562 L23: 0.3046 REMARK 3 S TENSOR REMARK 3 S11: -0.0183 S12: -0.0403 S13: -0.0120 REMARK 3 S21: 0.0625 S22: 0.0193 S23: -0.0016 REMARK 3 S31: 0.0371 S32: -0.0763 S33: -0.0011 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 232 A 430 REMARK 3 ORIGIN FOR THE GROUP (A): 17.4289 42.0108 13.1482 REMARK 3 T TENSOR REMARK 3 T11: 0.1157 T22: 0.0998 REMARK 3 T33: 0.0260 T12: -0.0046 REMARK 3 T13: -0.0166 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 1.9192 L22: 2.1958 REMARK 3 L33: 1.0955 L12: -0.0422 REMARK 3 L13: -0.0236 L23: 0.2785 REMARK 3 S TENSOR REMARK 3 S11: 0.0657 S12: 0.2144 S13: 0.0640 REMARK 3 S21: -0.1781 S22: -0.1592 S23: -0.0662 REMARK 3 S31: 0.0370 S32: 0.0441 S33: 0.0935 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3R38 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064432. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND[111] REMARK 200 OPTICS : BE-LENSES/DIAMOND LAUE MONO REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26370 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2RL2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7.6 MG/ML PROTEIN IN 10 MM TRIS-HCL, REMARK 280 0.25 M SODIUM CHLORIDE, 5 MM BME. CRYSTALLIZATION CONDITION: THE REMARK 280 CLASSICS II SUITE CONDITION A5 (0.1 M HEPES, PH 7.5, 2 M REMARK 280 AMMONIUM SULFATE). CRYO CONDITION: 1:1 V/V 3.6 M AMMONIUM REMARK 280 SULFATE : 50 % SUCROSE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 72.28950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.96150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 72.28950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.96150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 44.33671 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 25.96150 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 73.00987 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -274.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -27.95279 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 73.00987 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 GLU A 278 REMARK 465 ASN A 279 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 62 28.18 80.66 REMARK 500 ASN A 69 -126.41 56.04 REMARK 500 CYS A 117 -57.91 -122.41 REMARK 500 ALA A 118 -155.61 -65.63 REMARK 500 PRO A 162 70.17 -69.11 REMARK 500 ASN A 342 16.11 81.16 REMARK 500 VAL A 423 -35.48 -38.74 REMARK 500 ASN A 425 61.56 -156.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 431 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 432 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 433 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 434 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 435 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 436 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 437 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 438 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 439 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 440 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 441 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP00355 RELATED DB: TARGETDB DBREF 3R38 A 1 430 UNP Q8Y4C4 MURA1_LISMO 1 430 SEQADV 3R38 MET A -23 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 HIS A -22 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 HIS A -21 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 HIS A -20 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 HIS A -19 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 HIS A -18 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 HIS A -17 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 SER A -16 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 SER A -15 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 GLY A -14 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 VAL A -13 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 ASP A -12 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 LEU A -11 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 GLY A -10 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 THR A -9 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 GLU A -8 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 ASN A -7 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 LEU A -6 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 TYR A -5 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 PHE A -4 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 GLN A -3 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 SER A -2 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 ASN A -1 UNP Q8Y4C4 EXPRESSION TAG SEQADV 3R38 ALA A 0 UNP Q8Y4C4 EXPRESSION TAG SEQRES 1 A 454 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 454 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET GLU SEQRES 3 A 454 LYS ILE ILE VAL ARG GLY GLY LYS GLN LEU ASN GLY SER SEQRES 4 A 454 VAL LYS MET GLU GLY ALA LYS ASN ALA VAL LEU PRO VAL SEQRES 5 A 454 ILE ALA ALA THR LEU LEU ALA SER LYS GLY THR SER VAL SEQRES 6 A 454 LEU LYS ASN VAL PRO ASN LEU SER ASP VAL PHE THR ILE SEQRES 7 A 454 ASN GLU VAL LEU LYS TYR LEU ASN ALA ASP VAL SER PHE SEQRES 8 A 454 VAL ASN ASP GLU VAL THR VAL ASP ALA THR GLY GLU ILE SEQRES 9 A 454 THR SER ASP ALA PRO PHE GLU TYR VAL ARG LYS MET ARG SEQRES 10 A 454 ALA SER ILE VAL VAL MET GLY PRO LEU LEU ALA ARG THR SEQRES 11 A 454 GLY SER ALA ARG VAL ALA LEU PRO GLY GLY CYS ALA ILE SEQRES 12 A 454 GLY SER ARG PRO VAL ASP LEU HIS LEU LYS GLY PHE GLU SEQRES 13 A 454 ALA MET GLY ALA VAL VAL LYS ILE GLU ASN GLY TYR ILE SEQRES 14 A 454 GLU ALA THR ALA GLU LYS LEU VAL GLY ALA LYS VAL TYR SEQRES 15 A 454 LEU ASP PHE PRO SER VAL GLY ALA THR GLN ASN ILE MET SEQRES 16 A 454 MET ALA ALA THR LEU ALA GLU GLY THR THR VAL ILE GLU SEQRES 17 A 454 ASN VAL ALA ARG GLU PRO GLU ILE VAL ASP LEU ALA ASN SEQRES 18 A 454 PHE LEU ASN GLN MET GLY ALA ARG VAL ILE GLY ALA GLY SEQRES 19 A 454 THR GLU VAL ILE ARG ILE GLU GLY VAL LYS GLU LEU THR SEQRES 20 A 454 ALA THR GLU HIS SER ILE ILE PRO ASP ARG ILE GLU ALA SEQRES 21 A 454 GLY THR PHE MET ILE ALA ALA ALA ILE THR GLY GLY ASN SEQRES 22 A 454 VAL LEU ILE GLU ASP ALA VAL PRO GLU HIS ILE SER SER SEQRES 23 A 454 LEU ILE ALA LYS LEU GLU GLU MET GLY VAL GLN ILE ILE SEQRES 24 A 454 GLU GLU GLU ASN GLY ILE ARG VAL ILE GLY PRO ASP LYS SEQRES 25 A 454 LEU LYS ALA VAL ASP VAL LYS THR MET PRO HIS PRO GLY SEQRES 26 A 454 PHE PRO THR ASP MET GLN SER GLN MET MET VAL ILE GLN SEQRES 27 A 454 MET LEU SER GLU GLY THR SER ILE MET THR GLU THR VAL SEQRES 28 A 454 PHE GLU ASN ARG PHE MET HIS VAL GLU GLU MET ARG ARG SEQRES 29 A 454 MET ASN ALA ASP MET LYS ILE GLU GLY HIS SER VAL ILE SEQRES 30 A 454 ILE SER GLY PRO ALA LYS LEU GLN GLY ALA GLU VAL ALA SEQRES 31 A 454 ALA THR ASP LEU ARG ALA ALA ALA ALA LEU ILE LEU ALA SEQRES 32 A 454 GLY LEU VAL ALA ASP GLY TYR THR GLN VAL THR GLU LEU SEQRES 33 A 454 LYS TYR LEU ASP ARG GLY TYR ASN ASN PHE HIS GLY LYS SEQRES 34 A 454 LEU GLN ALA LEU GLY ALA ASP VAL GLU ARG VAL ASP ASP SEQRES 35 A 454 SER LYS VAL ASP VAL THR ASN LEU ALA SER LEU PHE HET CL A 431 1 HET SO4 A 432 5 HET SO4 A 433 5 HET SO4 A 434 5 HET SO4 A 435 5 HET SO4 A 436 5 HET SO4 A 437 5 HET SO4 A 438 5 HET SO4 A 439 5 HET SO4 A 440 5 HET SO4 A 441 5 HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 2 CL CL 1- FORMUL 3 SO4 10(O4 S 2-) FORMUL 13 HOH *184(H2 O) HELIX 1 1 ALA A 21 THR A 32 1 12 HELIX 2 2 LEU A 48 LEU A 61 1 14 HELIX 3 3 PHE A 86 MET A 92 1 7 HELIX 4 4 ARG A 93 VAL A 97 5 5 HELIX 5 5 VAL A 98 GLY A 107 1 10 HELIX 6 6 VAL A 124 MET A 134 1 11 HELIX 7 7 SER A 163 THR A 175 1 13 HELIX 8 8 GLU A 189 MET A 202 1 14 HELIX 9 9 ASP A 232 THR A 246 1 15 HELIX 10 10 VAL A 256 HIS A 259 5 4 HELIX 11 11 ILE A 260 MET A 270 1 11 HELIX 12 12 PRO A 303 ASP A 305 5 3 HELIX 13 13 MET A 306 SER A 317 1 12 HELIX 14 14 HIS A 334 MET A 341 1 8 HELIX 15 15 ASP A 369 ALA A 383 1 15 HELIX 16 16 LEU A 392 ARG A 397 1 6 HELIX 17 17 ASN A 401 LEU A 409 1 9 HELIX 18 18 ASP A 422 LEU A 429 5 8 SHEET 1 A 4 GLU A 364 ALA A 366 0 SHEET 2 A 4 TYR A 386 THR A 390 1 O GLN A 388 N VAL A 365 SHEET 3 A 4 LYS A 3 ARG A 7 -1 N ILE A 4 O VAL A 389 SHEET 4 A 4 ASP A 412 VAL A 416 -1 O VAL A 416 N LYS A 3 SHEET 1 B 4 ASN A 13 LYS A 17 0 SHEET 2 B 4 ASN A 249 GLU A 253 1 O LEU A 251 N GLY A 14 SHEET 3 B 4 ILE A 281 ILE A 284 -1 O ILE A 281 N ILE A 252 SHEET 4 B 4 GLN A 273 ILE A 275 -1 N ILE A 275 O ARG A 282 SHEET 1 C 2 ALA A 35 LYS A 37 0 SHEET 2 C 2 LEU A 222 THR A 223 1 O LEU A 222 N SER A 36 SHEET 1 D 4 ASP A 64 VAL A 68 0 SHEET 2 D 4 GLU A 71 ASP A 75 -1 O THR A 73 N SER A 66 SHEET 3 D 4 SER A 40 LYS A 43 -1 N LEU A 42 O VAL A 72 SHEET 4 D 4 GLU A 226 SER A 228 1 O HIS A 227 N LYS A 43 SHEET 1 E 4 ASP A 83 ALA A 84 0 SHEET 2 E 4 SER A 108 ALA A 112 1 O ARG A 110 N ALA A 84 SHEET 3 E 4 TYR A 144 THR A 148 -1 O ILE A 145 N VAL A 111 SHEET 4 E 4 VAL A 137 GLU A 141 -1 N VAL A 137 O THR A 148 SHEET 1 F 4 LYS A 156 TYR A 158 0 SHEET 2 F 4 THR A 180 GLU A 184 1 O GLU A 184 N VAL A 157 SHEET 3 F 4 VAL A 213 GLU A 217 -1 O ILE A 214 N ILE A 183 SHEET 4 F 4 VAL A 206 ILE A 207 -1 N ILE A 207 O ARG A 215 SHEET 1 G 4 VAL A 294 LYS A 295 0 SHEET 2 G 4 THR A 320 THR A 324 1 O ILE A 322 N VAL A 294 SHEET 3 G 4 SER A 351 SER A 355 -1 O ILE A 354 N SER A 321 SHEET 4 G 4 MET A 345 GLU A 348 -1 N GLU A 348 O SER A 351 CISPEP 1 HIS A 299 PRO A 300 0 0.80 CISPEP 2 GLY A 356 PRO A 357 0 -0.19 SITE 1 AC1 2 LEU A 370 ARG A 397 SITE 1 AC2 4 GLN A 201 HIS A 227 SER A 228 HOH A 550 SITE 1 AC3 7 SER A 163 VAL A 164 GLY A 165 PHE A 328 SITE 2 AC3 7 HOH A 515 HOH A 557 HOH A 603 SITE 1 AC4 3 ARG A 93 TYR A 394 ARG A 397 SITE 1 AC5 6 ARG A 93 GLY A 116 CYS A 117 ALA A 118 SITE 2 AC5 6 ILE A 119 SER A 121 SITE 1 AC6 1 ARG A 188 SITE 1 AC7 3 VAL A 213 ARG A 215 SO4 A 438 SITE 1 AC8 3 LYS A 156 ARG A 215 SO4 A 437 SITE 1 AC9 2 LYS A 393 ARG A 397 SITE 1 BC1 4 ARG A 7 TYR A 386 ALA A 427 HOH A 612 SITE 1 BC2 1 GLN A 201 CRYST1 144.579 51.923 78.178 90.00 110.95 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006917 0.000000 0.002648 0.00000 SCALE2 0.000000 0.019259 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013696 0.00000