HEADER APOPTOSIS 24-MAR-11 3R8K TITLE CRYSTAL STRUCTURE OF HUMAN SOUL PROTEIN (HEXAGONAL FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEME-BINDING PROTEIN 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PLACENTAL PROTEIN 23, PP23, PROTEIN SOUL; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C6ORF34, HEBP2, SOUL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 C41; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE50 KEYWDS HEBP FAMILY, SOUL PROTEIN, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR E.K.AMBROSI,S.CAPALDI,M.BOVI,G.SACCOMANI,M.PERDUCA,H.L.MONACO REVDAT 3 13-SEP-23 3R8K 1 SEQADV REVDAT 2 24-AUG-11 3R8K 1 JRNL VERSN REVDAT 1 29-JUN-11 3R8K 0 JRNL AUTH E.AMBROSI,S.CAPALDI,M.BOVI,G.SACCOMANI,M.PERDUCA,H.L.MONACO JRNL TITL STRUCTURAL CHANGES IN THE BH3 DOMAIN OF SOUL PROTEIN UPON JRNL TITL 2 INTERACTION WITH THE ANTI-APOPTOTIC PROTEIN BCL-XL. JRNL REF BIOCHEM.J. V. 438 291 2011 JRNL REFN ISSN 0264-6021 JRNL PMID 21639858 JRNL DOI 10.1042/BJ20110257 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.760 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 35223 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.4187 - 6.1377 0.98 3555 198 0.2147 0.2414 REMARK 3 2 6.1377 - 4.8726 1.00 3417 178 0.1950 0.2373 REMARK 3 3 4.8726 - 4.2570 1.00 3374 166 0.1702 0.1818 REMARK 3 4 4.2570 - 3.8678 1.00 3324 197 0.2121 0.2573 REMARK 3 5 3.8678 - 3.5907 1.00 3325 178 0.2547 0.2869 REMARK 3 6 3.5907 - 3.3790 1.00 3306 171 0.2970 0.3180 REMARK 3 7 3.3790 - 3.2098 1.00 3303 169 0.2816 0.3456 REMARK 3 8 3.2098 - 3.0701 1.00 3293 163 0.3088 0.3660 REMARK 3 9 3.0701 - 2.9519 1.00 3300 165 0.3520 0.3768 REMARK 3 10 2.9519 - 2.8500 1.00 3265 176 0.3852 0.4875 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 41.42 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.21020 REMARK 3 B22 (A**2) : -0.21020 REMARK 3 B33 (A**2) : 0.42040 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5773 REMARK 3 ANGLE : 1.169 7835 REMARK 3 CHIRALITY : 0.074 837 REMARK 3 PLANARITY : 0.006 1019 REMARK 3 DIHEDRAL : 15.664 2151 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3R8K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000064624. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : CHANNEL CUT ESRF MONOCHROMATOR, REMARK 200 CRYSTAL TYPE: SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35245 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 55.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.50 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 20.40 REMARK 200 R MERGE FOR SHELL (I) : 0.39000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 8.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3R8J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M AMMONIUM SULPHATE, 0.1M TRIS-HCL, REMARK 280 0.2M 1-BUTYL-3-METHYLIMIDAZOLIUM CHLORIDE, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.70667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 161.41333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 121.06000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 201.76667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.35333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.70667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 161.41333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 201.76667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 121.06000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 40.35333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -2 REMARK 465 ARG A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 PRO A 4 REMARK 465 LEU A 5 REMARK 465 GLN A 6 REMARK 465 PRO A 7 REMARK 465 ASP A 8 REMARK 465 PRO A 9 REMARK 465 GLY A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 GLU A 13 REMARK 465 ASP A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 GLN A 18 REMARK 465 GLU A 199 REMARK 465 PRO A 200 REMARK 465 THR A 201 REMARK 465 LYS A 202 REMARK 465 GLU A 203 REMARK 465 ASN A 204 REMARK 465 GLU A 205 REMARK 465 LEU A 206 REMARK 465 VAL A 207 REMARK 465 PRO A 208 REMARK 465 ARG A 209 REMARK 465 MET B -2 REMARK 465 ARG B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 ALA B 2 REMARK 465 GLU B 3 REMARK 465 PRO B 4 REMARK 465 LEU B 5 REMARK 465 GLN B 6 REMARK 465 PRO B 7 REMARK 465 ASP B 8 REMARK 465 PRO B 9 REMARK 465 GLY B 10 REMARK 465 ALA B 11 REMARK 465 ALA B 12 REMARK 465 GLU B 13 REMARK 465 ASP B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 ALA B 17 REMARK 465 GLN B 18 REMARK 465 GLU B 199 REMARK 465 PRO B 200 REMARK 465 THR B 201 REMARK 465 LYS B 202 REMARK 465 GLU B 203 REMARK 465 ASN B 204 REMARK 465 GLU B 205 REMARK 465 LEU B 206 REMARK 465 VAL B 207 REMARK 465 PRO B 208 REMARK 465 ARG B 209 REMARK 465 MET C -2 REMARK 465 ARG C -1 REMARK 465 GLY C 0 REMARK 465 SER C 1 REMARK 465 ALA C 2 REMARK 465 GLU C 3 REMARK 465 PRO C 4 REMARK 465 LEU C 5 REMARK 465 GLN C 6 REMARK 465 PRO C 7 REMARK 465 ASP C 8 REMARK 465 PRO C 9 REMARK 465 GLY C 10 REMARK 465 ALA C 11 REMARK 465 ALA C 12 REMARK 465 GLU C 13 REMARK 465 ASP C 14 REMARK 465 ALA C 15 REMARK 465 ALA C 16 REMARK 465 ALA C 17 REMARK 465 GLN C 18 REMARK 465 GLU C 29 REMARK 465 ASP C 30 REMARK 465 ALA C 31 REMARK 465 GLY C 32 REMARK 465 PRO C 33 REMARK 465 GLN C 34 REMARK 465 PRO C 35 REMARK 465 GLY C 36 REMARK 465 GLU C 199 REMARK 465 PRO C 200 REMARK 465 THR C 201 REMARK 465 LYS C 202 REMARK 465 GLU C 203 REMARK 465 ASN C 204 REMARK 465 GLU C 205 REMARK 465 LEU C 206 REMARK 465 VAL C 207 REMARK 465 PRO C 208 REMARK 465 ARG C 209 REMARK 465 MET D -2 REMARK 465 ARG D -1 REMARK 465 GLY D 0 REMARK 465 SER D 1 REMARK 465 ALA D 2 REMARK 465 GLU D 3 REMARK 465 PRO D 4 REMARK 465 LEU D 5 REMARK 465 GLN D 6 REMARK 465 PRO D 7 REMARK 465 ASP D 8 REMARK 465 PRO D 9 REMARK 465 GLY D 10 REMARK 465 ALA D 11 REMARK 465 ALA D 12 REMARK 465 GLU D 13 REMARK 465 ASP D 14 REMARK 465 ALA D 15 REMARK 465 ALA D 16 REMARK 465 ALA D 17 REMARK 465 GLN D 18 REMARK 465 ASP D 30 REMARK 465 ALA D 31 REMARK 465 GLY D 32 REMARK 465 PRO D 33 REMARK 465 GLN D 34 REMARK 465 PRO D 35 REMARK 465 GLU D 199 REMARK 465 PRO D 200 REMARK 465 THR D 201 REMARK 465 LYS D 202 REMARK 465 GLU D 203 REMARK 465 ASN D 204 REMARK 465 GLU D 205 REMARK 465 LEU D 206 REMARK 465 VAL D 207 REMARK 465 PRO D 208 REMARK 465 ARG D 209 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 28 -173.58 -66.88 REMARK 500 SER A 37 -75.16 -76.10 REMARK 500 GLU A 54 74.58 -118.67 REMARK 500 LYS A 76 44.15 -76.40 REMARK 500 LYS A 79 12.18 -60.24 REMARK 500 GLU A 80 47.73 39.32 REMARK 500 PRO A 112 171.16 -56.88 REMARK 500 PRO A 120 154.29 -47.97 REMARK 500 SER A 147 145.36 -174.13 REMARK 500 ASP A 165 9.60 -70.00 REMARK 500 ASN A 187 77.94 -104.89 REMARK 500 ASN A 190 176.60 -54.28 REMARK 500 PRO B 23 170.92 -55.61 REMARK 500 ASP B 30 8.22 -61.53 REMARK 500 GLU B 54 60.13 -114.23 REMARK 500 LYS B 76 47.75 -72.01 REMARK 500 LYS B 79 18.75 -69.68 REMARK 500 GLU B 80 35.86 33.57 REMARK 500 PRO B 120 97.86 -61.64 REMARK 500 ARG B 121 132.53 -34.62 REMARK 500 PRO B 182 32.06 -93.32 REMARK 500 LYS B 184 91.48 -66.62 REMARK 500 ASN B 190 157.51 -45.21 REMARK 500 PRO C 23 154.07 -47.41 REMARK 500 TYR C 38 145.51 -172.10 REMARK 500 GLU C 80 43.06 33.28 REMARK 500 TYR C 179 -70.48 -68.31 REMARK 500 LYS C 184 48.33 -77.88 REMARK 500 ASN C 190 173.81 -49.97 REMARK 500 TYR D 38 -166.38 -117.20 REMARK 500 GLU D 80 21.01 47.45 REMARK 500 PRO D 99 -0.95 -56.00 REMARK 500 SER D 125 30.83 -83.61 REMARK 500 ASP D 126 -2.07 -142.75 REMARK 500 PHE D 145 137.43 -33.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3R8J RELATED DB: PDB REMARK 900 THE SAME PROTEIN, ORTHORHOMBIC FORM REMARK 900 RELATED ID: 3R85 RELATED DB: PDB REMARK 900 BH3 DOMAIN CONTAINING PEPTIDE OF SOUL PROTEIN IN COMPLEX WITH BCL-XL DBREF 3R8K A 2 205 UNP Q9Y5Z4 HEBP2_HUMAN 2 205 DBREF 3R8K B 2 205 UNP Q9Y5Z4 HEBP2_HUMAN 2 205 DBREF 3R8K C 2 205 UNP Q9Y5Z4 HEBP2_HUMAN 2 205 DBREF 3R8K D 2 205 UNP Q9Y5Z4 HEBP2_HUMAN 2 205 SEQADV 3R8K MET A -2 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K ARG A -1 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K GLY A 0 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K SER A 1 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K LEU A 206 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K VAL A 207 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K PRO A 208 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K ARG A 209 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K MET B -2 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K ARG B -1 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K GLY B 0 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K SER B 1 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K LEU B 206 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K VAL B 207 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K PRO B 208 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K ARG B 209 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K MET C -2 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K ARG C -1 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K GLY C 0 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K SER C 1 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K LEU C 206 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K VAL C 207 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K PRO C 208 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K ARG C 209 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K MET D -2 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K ARG D -1 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K GLY D 0 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K SER D 1 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K LEU D 206 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K VAL D 207 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K PRO D 208 UNP Q9Y5Z4 EXPRESSION TAG SEQADV 3R8K ARG D 209 UNP Q9Y5Z4 EXPRESSION TAG SEQRES 1 A 212 MET ARG GLY SER ALA GLU PRO LEU GLN PRO ASP PRO GLY SEQRES 2 A 212 ALA ALA GLU ASP ALA ALA ALA GLN ALA VAL GLU THR PRO SEQRES 3 A 212 GLY TRP LYS ALA PRO GLU ASP ALA GLY PRO GLN PRO GLY SEQRES 4 A 212 SER TYR GLU ILE ARG HIS TYR GLY PRO ALA LYS TRP VAL SEQRES 5 A 212 SER THR SER VAL GLU SER MET ASP TRP ASP SER ALA ILE SEQRES 6 A 212 GLN THR GLY PHE THR LYS LEU ASN SER TYR ILE GLN GLY SEQRES 7 A 212 LYS ASN GLU LYS GLU MET LYS ILE LYS MET THR ALA PRO SEQRES 8 A 212 VAL THR SER TYR VAL GLU PRO GLY SER GLY PRO PHE SER SEQRES 9 A 212 GLU SER THR ILE THR ILE SER LEU TYR ILE PRO SER GLU SEQRES 10 A 212 GLN GLN PHE ASP PRO PRO ARG PRO LEU GLU SER ASP VAL SEQRES 11 A 212 PHE ILE GLU ASP ARG ALA GLU MET THR VAL PHE VAL ARG SEQRES 12 A 212 SER PHE ASP GLY PHE SER SER ALA GLN LYS ASN GLN GLU SEQRES 13 A 212 GLN LEU LEU THR LEU ALA SER ILE LEU ARG GLU ASP GLY SEQRES 14 A 212 LYS VAL PHE ASP GLU LYS VAL TYR TYR THR ALA GLY TYR SEQRES 15 A 212 ASN SER PRO VAL LYS LEU LEU ASN ARG ASN ASN GLU VAL SEQRES 16 A 212 TRP LEU ILE GLN LYS ASN GLU PRO THR LYS GLU ASN GLU SEQRES 17 A 212 LEU VAL PRO ARG SEQRES 1 B 212 MET ARG GLY SER ALA GLU PRO LEU GLN PRO ASP PRO GLY SEQRES 2 B 212 ALA ALA GLU ASP ALA ALA ALA GLN ALA VAL GLU THR PRO SEQRES 3 B 212 GLY TRP LYS ALA PRO GLU ASP ALA GLY PRO GLN PRO GLY SEQRES 4 B 212 SER TYR GLU ILE ARG HIS TYR GLY PRO ALA LYS TRP VAL SEQRES 5 B 212 SER THR SER VAL GLU SER MET ASP TRP ASP SER ALA ILE SEQRES 6 B 212 GLN THR GLY PHE THR LYS LEU ASN SER TYR ILE GLN GLY SEQRES 7 B 212 LYS ASN GLU LYS GLU MET LYS ILE LYS MET THR ALA PRO SEQRES 8 B 212 VAL THR SER TYR VAL GLU PRO GLY SER GLY PRO PHE SER SEQRES 9 B 212 GLU SER THR ILE THR ILE SER LEU TYR ILE PRO SER GLU SEQRES 10 B 212 GLN GLN PHE ASP PRO PRO ARG PRO LEU GLU SER ASP VAL SEQRES 11 B 212 PHE ILE GLU ASP ARG ALA GLU MET THR VAL PHE VAL ARG SEQRES 12 B 212 SER PHE ASP GLY PHE SER SER ALA GLN LYS ASN GLN GLU SEQRES 13 B 212 GLN LEU LEU THR LEU ALA SER ILE LEU ARG GLU ASP GLY SEQRES 14 B 212 LYS VAL PHE ASP GLU LYS VAL TYR TYR THR ALA GLY TYR SEQRES 15 B 212 ASN SER PRO VAL LYS LEU LEU ASN ARG ASN ASN GLU VAL SEQRES 16 B 212 TRP LEU ILE GLN LYS ASN GLU PRO THR LYS GLU ASN GLU SEQRES 17 B 212 LEU VAL PRO ARG SEQRES 1 C 212 MET ARG GLY SER ALA GLU PRO LEU GLN PRO ASP PRO GLY SEQRES 2 C 212 ALA ALA GLU ASP ALA ALA ALA GLN ALA VAL GLU THR PRO SEQRES 3 C 212 GLY TRP LYS ALA PRO GLU ASP ALA GLY PRO GLN PRO GLY SEQRES 4 C 212 SER TYR GLU ILE ARG HIS TYR GLY PRO ALA LYS TRP VAL SEQRES 5 C 212 SER THR SER VAL GLU SER MET ASP TRP ASP SER ALA ILE SEQRES 6 C 212 GLN THR GLY PHE THR LYS LEU ASN SER TYR ILE GLN GLY SEQRES 7 C 212 LYS ASN GLU LYS GLU MET LYS ILE LYS MET THR ALA PRO SEQRES 8 C 212 VAL THR SER TYR VAL GLU PRO GLY SER GLY PRO PHE SER SEQRES 9 C 212 GLU SER THR ILE THR ILE SER LEU TYR ILE PRO SER GLU SEQRES 10 C 212 GLN GLN PHE ASP PRO PRO ARG PRO LEU GLU SER ASP VAL SEQRES 11 C 212 PHE ILE GLU ASP ARG ALA GLU MET THR VAL PHE VAL ARG SEQRES 12 C 212 SER PHE ASP GLY PHE SER SER ALA GLN LYS ASN GLN GLU SEQRES 13 C 212 GLN LEU LEU THR LEU ALA SER ILE LEU ARG GLU ASP GLY SEQRES 14 C 212 LYS VAL PHE ASP GLU LYS VAL TYR TYR THR ALA GLY TYR SEQRES 15 C 212 ASN SER PRO VAL LYS LEU LEU ASN ARG ASN ASN GLU VAL SEQRES 16 C 212 TRP LEU ILE GLN LYS ASN GLU PRO THR LYS GLU ASN GLU SEQRES 17 C 212 LEU VAL PRO ARG SEQRES 1 D 212 MET ARG GLY SER ALA GLU PRO LEU GLN PRO ASP PRO GLY SEQRES 2 D 212 ALA ALA GLU ASP ALA ALA ALA GLN ALA VAL GLU THR PRO SEQRES 3 D 212 GLY TRP LYS ALA PRO GLU ASP ALA GLY PRO GLN PRO GLY SEQRES 4 D 212 SER TYR GLU ILE ARG HIS TYR GLY PRO ALA LYS TRP VAL SEQRES 5 D 212 SER THR SER VAL GLU SER MET ASP TRP ASP SER ALA ILE SEQRES 6 D 212 GLN THR GLY PHE THR LYS LEU ASN SER TYR ILE GLN GLY SEQRES 7 D 212 LYS ASN GLU LYS GLU MET LYS ILE LYS MET THR ALA PRO SEQRES 8 D 212 VAL THR SER TYR VAL GLU PRO GLY SER GLY PRO PHE SER SEQRES 9 D 212 GLU SER THR ILE THR ILE SER LEU TYR ILE PRO SER GLU SEQRES 10 D 212 GLN GLN PHE ASP PRO PRO ARG PRO LEU GLU SER ASP VAL SEQRES 11 D 212 PHE ILE GLU ASP ARG ALA GLU MET THR VAL PHE VAL ARG SEQRES 12 D 212 SER PHE ASP GLY PHE SER SER ALA GLN LYS ASN GLN GLU SEQRES 13 D 212 GLN LEU LEU THR LEU ALA SER ILE LEU ARG GLU ASP GLY SEQRES 14 D 212 LYS VAL PHE ASP GLU LYS VAL TYR TYR THR ALA GLY TYR SEQRES 15 D 212 ASN SER PRO VAL LYS LEU LEU ASN ARG ASN ASN GLU VAL SEQRES 16 D 212 TRP LEU ILE GLN LYS ASN GLU PRO THR LYS GLU ASN GLU SEQRES 17 D 212 LEU VAL PRO ARG HELIX 1 1 PRO A 28 GLY A 32 5 5 HELIX 2 2 ASP A 57 GLN A 74 1 18 HELIX 3 3 SER A 147 ASP A 165 1 19 HELIX 4 4 PRO B 28 GLY B 32 5 5 HELIX 5 5 ASP B 57 GLN B 74 1 18 HELIX 6 6 SER B 147 ASP B 165 1 19 HELIX 7 7 ASP C 57 GLY C 75 1 19 HELIX 8 8 PRO C 112 PHE C 117 1 6 HELIX 9 9 SER C 147 GLU C 164 1 18 HELIX 10 10 ASP D 57 GLN D 74 1 18 HELIX 11 11 PRO D 112 GLN D 116 5 5 HELIX 12 12 SER D 147 ASP D 165 1 19 SHEET 1 A 9 TRP A 25 LYS A 26 0 SHEET 2 A 9 GLU B 39 TYR B 43 -1 O HIS B 42 N LYS A 26 SHEET 3 A 9 MET B 135 SER B 141 -1 O VAL B 139 N GLU B 39 SHEET 4 A 9 GLU B 191 ILE B 195 -1 O LEU B 194 N PHE B 138 SHEET 5 A 9 TYR B 174 GLY B 178 -1 N ALA B 177 O GLU B 191 SHEET 6 A 9 VAL B 89 GLU B 94 -1 N VAL B 89 O GLY B 178 SHEET 7 A 9 THR B 104 TYR B 110 -1 O SER B 108 N THR B 90 SHEET 8 A 9 ALA B 46 VAL B 53 -1 N THR B 51 O ILE B 107 SHEET 9 A 9 VAL B 127 ARG B 132 -1 O GLU B 130 N TRP B 48 SHEET 1 B 9 VAL A 127 ARG A 132 0 SHEET 2 B 9 ALA A 46 SER A 55 -1 N TRP A 48 O GLU A 130 SHEET 3 B 9 SER A 103 TYR A 110 -1 O SER A 103 N SER A 55 SHEET 4 B 9 VAL A 89 GLU A 94 -1 N GLU A 94 O THR A 104 SHEET 5 B 9 TYR A 174 GLY A 178 -1 O GLY A 178 N VAL A 89 SHEET 6 B 9 GLU A 191 ILE A 195 -1 O GLU A 191 N ALA A 177 SHEET 7 B 9 MET A 135 SER A 141 -1 N PHE A 138 O LEU A 194 SHEET 8 B 9 GLU A 39 TYR A 43 -1 N TYR A 43 O MET A 135 SHEET 9 B 9 TRP B 25 LYS B 26 -1 O LYS B 26 N HIS A 42 SHEET 1 C 9 TRP C 25 LYS C 26 0 SHEET 2 C 9 GLU C 39 TYR C 43 -1 O HIS C 42 N LYS C 26 SHEET 3 C 9 MET C 135 SER C 141 -1 O VAL C 139 N GLU C 39 SHEET 4 C 9 GLU C 191 ILE C 195 -1 O LEU C 194 N PHE C 138 SHEET 5 C 9 TYR C 174 ALA C 177 -1 N TYR C 175 O TRP C 193 SHEET 6 C 9 THR C 90 GLU C 94 -1 N SER C 91 O THR C 176 SHEET 7 C 9 SER C 103 TYR C 110 -1 O THR C 106 N TYR C 92 SHEET 8 C 9 ALA C 46 SER C 55 -1 N VAL C 53 O ILE C 105 SHEET 9 C 9 VAL C 127 ARG C 132 -1 O GLU C 130 N TRP C 48 SHEET 1 D 9 TRP D 25 LYS D 26 0 SHEET 2 D 9 GLU D 39 TYR D 43 -1 O HIS D 42 N LYS D 26 SHEET 3 D 9 MET D 135 SER D 141 -1 O VAL D 137 N ARG D 41 SHEET 4 D 9 GLU D 191 ILE D 195 -1 O LEU D 194 N PHE D 138 SHEET 5 D 9 TYR D 174 GLY D 178 -1 N ALA D 177 O GLU D 191 SHEET 6 D 9 VAL D 89 GLU D 94 -1 N VAL D 89 O GLY D 178 SHEET 7 D 9 SER D 103 TYR D 110 -1 O THR D 106 N TYR D 92 SHEET 8 D 9 ALA D 46 SER D 55 -1 N SER D 55 O SER D 103 SHEET 9 D 9 VAL D 127 ARG D 132 -1 O GLU D 130 N TRP D 48 CISPEP 1 ALA A 87 PRO A 88 0 1.22 CISPEP 2 SER A 181 PRO A 182 0 8.25 CISPEP 3 ALA B 87 PRO B 88 0 3.61 CISPEP 4 SER B 181 PRO B 182 0 0.93 CISPEP 5 ALA C 87 PRO C 88 0 5.64 CISPEP 6 SER C 181 PRO C 182 0 -1.76 CISPEP 7 ALA D 87 PRO D 88 0 0.04 CISPEP 8 SER D 181 PRO D 182 0 6.30 CRYST1 143.919 143.919 242.120 90.00 90.00 120.00 P 61 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006948 0.004012 0.000000 0.00000 SCALE2 0.000000 0.008023 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004130 0.00000