HEADER TRANSFERASE/DNA 28-MAR-11 3RAQ TITLE DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER C BASE OPPOSITE TITLE 2 THE 1-METHYLGUANINE (MG1) LESION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: POL IV; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3'); COMPND 9 CHAIN: D, H; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: DNA PRIMER STRAND (DIDEOXY-TERMINATED AT THE 3-END); COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*C*CP*TP*AP*AP*CP*(MG1) COMPND 14 P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'); COMPND 15 CHAIN: E, J; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: DNA M1G-MODIFIED TEMPLATE STRAND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 2287; SOURCE 4 STRAIN: P2; SOURCE 5 GENE: DBH, DPO4, SSO2448; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) RIL CODON PLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET28A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: SYNTHETIC; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 OTHER_DETAILS: SYNTHETIC KEYWDS PROTEIN-DNA COMPLEX, DNA DAMAGE, DNA REPAIR, DNA REPLICATION, DNA- KEYWDS 2 BINDING, DNA-DIRECTED DNA POLYMERASE, NUCLEOTIDYLTRANSFERASE, KEYWDS 3 TRANSFERASE, TRANSFERASE-DNA COMPLEX, LESION BYPASS, DNA POLYMERASE, KEYWDS 4 Y-FAMILY POLYMERASE, DNA BINDING, NUCLEOTIDE (DNTP) BINDING, KEYWDS 5 MAGNESIUM, METAL-BINDING, 1-METHYLGUANINE EXPDTA X-RAY DIFFRACTION AUTHOR O.RECHKOBLIT,D.J.PATEL REVDAT 3 13-SEP-23 3RAQ 1 REMARK SEQADV LINK REVDAT 2 19-JUN-13 3RAQ 1 JRNL VERSN REVDAT 1 15-JUN-11 3RAQ 0 JRNL AUTH O.RECHKOBLIT,J.C.DELANEY,J.M.ESSIGMANN,D.J.PATEL JRNL TITL IMPLICATIONS FOR DAMAGE RECOGNITION DURING DPO4-MEDIATED JRNL TITL 2 MUTAGENIC BYPASS OF M1G AND M3C LESIONS. JRNL REF STRUCTURE V. 19 821 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 21645853 JRNL DOI 10.1016/J.STR.2011.03.020 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 48438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2578 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3544 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 180 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5480 REMARK 3 NUCLEIC ACID ATOMS : 1237 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 298 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.05000 REMARK 3 B22 (A**2) : 0.05000 REMARK 3 B33 (A**2) : 1.84000 REMARK 3 B12 (A**2) : 0.06000 REMARK 3 B13 (A**2) : -0.32000 REMARK 3 B23 (A**2) : -0.05000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.269 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.208 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.144 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.384 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7079 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4638 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9770 ; 1.420 ; 2.230 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11356 ; 0.895 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 680 ; 5.200 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 242 ;31.672 ;23.636 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1120 ;14.870 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;18.619 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1109 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6677 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1232 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3415 ; 0.523 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1376 ; 0.077 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5518 ; 0.883 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3664 ; 1.259 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4252 ; 2.040 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 341 REMARK 3 ORIGIN FOR THE GROUP (A): 1.5725 0.7113 2.2632 REMARK 3 T TENSOR REMARK 3 T11: 0.0574 T22: 0.0386 REMARK 3 T33: 0.0712 T12: 0.0169 REMARK 3 T13: 0.0420 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 1.3522 L22: 1.3675 REMARK 3 L33: 0.5555 L12: 0.3909 REMARK 3 L13: 0.1166 L23: -0.1826 REMARK 3 S TENSOR REMARK 3 S11: -0.0417 S12: 0.0910 S13: -0.0822 REMARK 3 S21: -0.0804 S22: 0.0197 S23: -0.0501 REMARK 3 S31: -0.0007 S32: -0.0408 S33: 0.0219 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1001 B 1341 REMARK 3 ORIGIN FOR THE GROUP (A): 25.3052 24.1449 40.9650 REMARK 3 T TENSOR REMARK 3 T11: 0.1082 T22: 0.1191 REMARK 3 T33: 0.0601 T12: 0.0464 REMARK 3 T13: 0.0089 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 2.5698 L22: 0.8958 REMARK 3 L33: 1.7123 L12: 0.1067 REMARK 3 L13: 1.1978 L23: -0.2411 REMARK 3 S TENSOR REMARK 3 S11: -0.2173 S12: 0.0047 S13: 0.1205 REMARK 3 S21: 0.0137 S22: 0.0337 S23: 0.0034 REMARK 3 S31: -0.2446 S32: -0.0445 S33: 0.1836 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 802 D 814 REMARK 3 RESIDUE RANGE : E 902 E 919 REMARK 3 RESIDUE RANGE : A 414 A 414 REMARK 3 ORIGIN FOR THE GROUP (A): -7.8608 -3.7993 -10.1665 REMARK 3 T TENSOR REMARK 3 T11: 0.1649 T22: 0.1929 REMARK 3 T33: 0.1341 T12: -0.0263 REMARK 3 T13: -0.0073 T23: -0.0510 REMARK 3 L TENSOR REMARK 3 L11: 2.0322 L22: 2.1626 REMARK 3 L33: 2.0911 L12: 0.7785 REMARK 3 L13: 0.5208 L23: -0.2162 REMARK 3 S TENSOR REMARK 3 S11: -0.2770 S12: 0.4778 S13: -0.1026 REMARK 3 S21: -0.4594 S22: 0.1990 S23: 0.2486 REMARK 3 S31: -0.0550 S32: -0.1936 S33: 0.0780 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1802 H 1814 REMARK 3 RESIDUE RANGE : J 1903 J 1919 REMARK 3 RESIDUE RANGE : B 1414 B 1414 REMARK 3 ORIGIN FOR THE GROUP (A): 35.4094 33.0140 51.5841 REMARK 3 T TENSOR REMARK 3 T11: 0.2269 T22: 0.3297 REMARK 3 T33: 0.2236 T12: -0.0194 REMARK 3 T13: -0.0922 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 4.1170 L22: 2.6208 REMARK 3 L33: 2.2824 L12: 0.9785 REMARK 3 L13: 1.5664 L23: 0.5014 REMARK 3 S TENSOR REMARK 3 S11: -0.3864 S12: -0.4314 S13: 0.5472 REMARK 3 S21: 0.0470 S22: -0.0469 S23: -0.3240 REMARK 3 S31: -0.5102 S32: 0.2826 S33: 0.4333 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3RAQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000064699. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : KOHZU HLD8-24 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51859 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3GIJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, PH 7.0, 100 MM CALCIUM REMARK 280 ACETATE AND 10% PEG 4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, H, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC E 900 REMARK 465 DC E 901 REMARK 465 DC J 1900 REMARK 465 DC J 1901 REMARK 465 DT J 1902 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT E 902 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT D 803 O4' - C1' - N1 ANGL. DEV. = 3.8 DEGREES REMARK 500 DG D 805 O4' - C1' - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 DT D 808 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA D 812 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG D 813 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC E 905 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC E 907 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DT E 908 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 DC E 915 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA E 917 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC E 919 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DT H1803 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG H1805 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DA H1807 O4' - C1' - N9 ANGL. DEV. = -7.0 DEGREES REMARK 500 DA H1812 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC J1910 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT J1913 C3' - O3' - P ANGL. DEV. = 7.6 DEGREES REMARK 500 DC J1918 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 10 55.02 27.31 REMARK 500 LEU A 68 70.45 -118.50 REMARK 500 ARG A 77 77.16 -107.08 REMARK 500 SER A 145 -167.83 -160.54 REMARK 500 LYS A 278 -25.82 87.13 REMARK 500 TYR B1010 56.28 26.47 REMARK 500 ARG B1077 72.30 -114.51 REMARK 500 LYS B1098 77.17 -68.48 REMARK 500 SER B1145 -163.79 -160.51 REMARK 500 ASN B1234 50.72 -149.30 REMARK 500 ASP B1277 70.43 49.70 REMARK 500 LYS B1278 -32.43 88.68 REMARK 500 ASP B1326 112.48 -160.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 415 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 7 OD2 REMARK 620 2 ASP A 105 OD1 84.3 REMARK 620 3 GLU A 106 OE2 99.9 97.3 REMARK 620 4 DGT A 414 O1A 85.8 91.7 169.8 REMARK 620 5 HOH A 519 O 99.4 169.6 91.8 78.9 REMARK 620 6 HOH A 538 O 165.4 81.5 78.7 97.9 95.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 416 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 7 OD1 REMARK 620 2 ASP A 7 OD2 51.6 REMARK 620 3 PHE A 8 O 90.8 110.6 REMARK 620 4 ASP A 105 OD2 118.3 76.3 77.5 REMARK 620 5 DGT A 414 O1B 155.8 151.0 85.5 84.3 REMARK 620 6 DGT A 414 O1A 111.8 75.7 153.0 78.7 79.5 REMARK 620 7 DGT A 414 O1G 80.0 108.8 119.8 156.1 81.2 80.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 417 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 181 O REMARK 620 2 ILE A 186 O 82.9 REMARK 620 3 HOH A 513 O 81.1 153.1 REMARK 620 4 HOH A 515 O 79.3 73.0 82.8 REMARK 620 5 HOH A 516 O 86.4 76.5 123.7 147.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1415 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 60 O REMARK 620 2 ASP B1007 OD2 146.5 REMARK 620 3 ASP B1007 OD1 165.6 44.0 REMARK 620 4 ASP B1105 OD1 77.3 112.8 89.0 REMARK 620 5 GLU B1106 OE2 77.5 69.3 112.9 114.9 REMARK 620 6 DGT B1414 O2A 101.1 109.9 74.6 92.2 151.4 REMARK 620 7 HOH B1519 O 92.1 79.3 100.9 167.9 67.7 83.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1416 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B1007 OD1 REMARK 620 2 PHE B1008 O 94.5 REMARK 620 3 ASP B1105 OD2 81.4 81.9 REMARK 620 4 DGT B1414 O2B 167.0 87.8 86.3 REMARK 620 5 DGT B1414 O1G 102.7 121.0 155.7 86.8 REMARK 620 6 DGT B1414 O2A 90.3 156.4 76.0 82.7 80.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1417 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B1181 O REMARK 620 2 ILE B1186 O 78.2 REMARK 620 3 HOH B1514 O 86.0 143.3 REMARK 620 4 HOH B1515 O 81.5 64.7 145.4 REMARK 620 5 HOH B1516 O 71.5 67.6 76.0 128.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGT A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE D 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGT B 1414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1417 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE H 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GIK RELATED DB: PDB REMARK 900 DPO4 EXTENSION TERNARY COMPLEX WITH THE OXOG(ANTI)-C(ANTI) PAIR REMARK 900 RELATED ID: 2ASD RELATED DB: PDB REMARK 900 OXOG-MODIFIED INSERTION TERNARY COMPLEX DBREF 3RAQ A 2 341 UNP Q97W02 DPO42_SULSO 2 341 DBREF 3RAQ B 1002 1341 UNP Q97W02 DPO42_SULSO 2 341 DBREF 3RAQ D 802 814 PDB 3RAQ 3RAQ 802 814 DBREF 3RAQ H 1802 1814 PDB 3RAQ 3RAQ 1802 1814 DBREF 3RAQ E 900 919 PDB 3RAQ 3RAQ 900 919 DBREF 3RAQ J 1900 1919 PDB 3RAQ 3RAQ 1900 1919 SEQADV 3RAQ GLY A 1 UNP Q97W02 EXPRESSION TAG SEQADV 3RAQ GLY B 1001 UNP Q97W02 EXPRESSION TAG SEQRES 1 A 341 GLY ILE VAL LEU PHE VAL ASP PHE ASP TYR PHE TYR ALA SEQRES 2 A 341 GLN VAL GLU GLU VAL LEU ASN PRO SER LEU LYS GLY LYS SEQRES 3 A 341 PRO VAL VAL VAL CYS VAL PHE SER GLY ARG PHE GLU ASP SEQRES 4 A 341 SER GLY ALA VAL ALA THR ALA ASN TYR GLU ALA ARG LYS SEQRES 5 A 341 PHE GLY VAL LYS ALA GLY ILE PRO ILE VAL GLU ALA LYS SEQRES 6 A 341 LYS ILE LEU PRO ASN ALA VAL TYR LEU PRO MET ARG LYS SEQRES 7 A 341 GLU VAL TYR GLN GLN VAL SER SER ARG ILE MET ASN LEU SEQRES 8 A 341 LEU ARG GLU TYR SER GLU LYS ILE GLU ILE ALA SER ILE SEQRES 9 A 341 ASP GLU ALA TYR LEU ASP ILE SER ASP LYS VAL ARG ASP SEQRES 10 A 341 TYR ARG GLU ALA TYR ASN LEU GLY LEU GLU ILE LYS ASN SEQRES 11 A 341 LYS ILE LEU GLU LYS GLU LYS ILE THR VAL THR VAL GLY SEQRES 12 A 341 ILE SER LYS ASN LYS VAL PHE ALA LYS ILE ALA ALA ASP SEQRES 13 A 341 MET ALA LYS PRO ASN GLY ILE LYS VAL ILE ASP ASP GLU SEQRES 14 A 341 GLU VAL LYS ARG LEU ILE ARG GLU LEU ASP ILE ALA ASP SEQRES 15 A 341 VAL PRO GLY ILE GLY ASN ILE THR ALA GLU LYS LEU LYS SEQRES 16 A 341 LYS LEU GLY ILE ASN LYS LEU VAL ASP THR LEU SER ILE SEQRES 17 A 341 GLU PHE ASP LYS LEU LYS GLY MET ILE GLY GLU ALA LYS SEQRES 18 A 341 ALA LYS TYR LEU ILE SER LEU ALA ARG ASP GLU TYR ASN SEQRES 19 A 341 GLU PRO ILE ARG THR ARG VAL ARG LYS SER ILE GLY ARG SEQRES 20 A 341 ILE VAL THR MET LYS ARG ASN SER ARG ASN LEU GLU GLU SEQRES 21 A 341 ILE LYS PRO TYR LEU PHE ARG ALA ILE GLU GLU SER TYR SEQRES 22 A 341 TYR LYS LEU ASP LYS ARG ILE PRO LYS ALA ILE HIS VAL SEQRES 23 A 341 VAL ALA VAL THR GLU ASP LEU ASP ILE VAL SER ARG GLY SEQRES 24 A 341 ARG THR PHE PRO HIS GLY ILE SER LYS GLU THR ALA TYR SEQRES 25 A 341 SER GLU SER VAL LYS LEU LEU GLN LYS ILE LEU GLU GLU SEQRES 26 A 341 ASP GLU ARG LYS ILE ARG ARG ILE GLY VAL ARG PHE SER SEQRES 27 A 341 LYS PHE ILE SEQRES 1 D 13 DG DT DT DG DG DA DT DG DG DT DA DG DOC SEQRES 1 E 20 DC DC DT DA DA DC MG1 DC DT DA DC DC DA SEQRES 2 E 20 DT DC DC DA DA DC DC SEQRES 1 B 341 GLY ILE VAL LEU PHE VAL ASP PHE ASP TYR PHE TYR ALA SEQRES 2 B 341 GLN VAL GLU GLU VAL LEU ASN PRO SER LEU LYS GLY LYS SEQRES 3 B 341 PRO VAL VAL VAL CYS VAL PHE SER GLY ARG PHE GLU ASP SEQRES 4 B 341 SER GLY ALA VAL ALA THR ALA ASN TYR GLU ALA ARG LYS SEQRES 5 B 341 PHE GLY VAL LYS ALA GLY ILE PRO ILE VAL GLU ALA LYS SEQRES 6 B 341 LYS ILE LEU PRO ASN ALA VAL TYR LEU PRO MET ARG LYS SEQRES 7 B 341 GLU VAL TYR GLN GLN VAL SER SER ARG ILE MET ASN LEU SEQRES 8 B 341 LEU ARG GLU TYR SER GLU LYS ILE GLU ILE ALA SER ILE SEQRES 9 B 341 ASP GLU ALA TYR LEU ASP ILE SER ASP LYS VAL ARG ASP SEQRES 10 B 341 TYR ARG GLU ALA TYR ASN LEU GLY LEU GLU ILE LYS ASN SEQRES 11 B 341 LYS ILE LEU GLU LYS GLU LYS ILE THR VAL THR VAL GLY SEQRES 12 B 341 ILE SER LYS ASN LYS VAL PHE ALA LYS ILE ALA ALA ASP SEQRES 13 B 341 MET ALA LYS PRO ASN GLY ILE LYS VAL ILE ASP ASP GLU SEQRES 14 B 341 GLU VAL LYS ARG LEU ILE ARG GLU LEU ASP ILE ALA ASP SEQRES 15 B 341 VAL PRO GLY ILE GLY ASN ILE THR ALA GLU LYS LEU LYS SEQRES 16 B 341 LYS LEU GLY ILE ASN LYS LEU VAL ASP THR LEU SER ILE SEQRES 17 B 341 GLU PHE ASP LYS LEU LYS GLY MET ILE GLY GLU ALA LYS SEQRES 18 B 341 ALA LYS TYR LEU ILE SER LEU ALA ARG ASP GLU TYR ASN SEQRES 19 B 341 GLU PRO ILE ARG THR ARG VAL ARG LYS SER ILE GLY ARG SEQRES 20 B 341 ILE VAL THR MET LYS ARG ASN SER ARG ASN LEU GLU GLU SEQRES 21 B 341 ILE LYS PRO TYR LEU PHE ARG ALA ILE GLU GLU SER TYR SEQRES 22 B 341 TYR LYS LEU ASP LYS ARG ILE PRO LYS ALA ILE HIS VAL SEQRES 23 B 341 VAL ALA VAL THR GLU ASP LEU ASP ILE VAL SER ARG GLY SEQRES 24 B 341 ARG THR PHE PRO HIS GLY ILE SER LYS GLU THR ALA TYR SEQRES 25 B 341 SER GLU SER VAL LYS LEU LEU GLN LYS ILE LEU GLU GLU SEQRES 26 B 341 ASP GLU ARG LYS ILE ARG ARG ILE GLY VAL ARG PHE SER SEQRES 27 B 341 LYS PHE ILE SEQRES 1 H 13 DG DT DT DG DG DA DT DG DG DT DA DG DOC SEQRES 1 J 20 DC DC DT DA DA DC MG1 DC DT DA DC DC DA SEQRES 2 J 20 DT DC DC DA DA DC DC MODRES 3RAQ DOC D 814 DC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE MODRES 3RAQ MG1 E 906 DG MODRES 3RAQ DOC H 1814 DC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE MODRES 3RAQ MG1 J 1906 DG HET DOC D 814 36 HET MG1 E 906 23 HET DOC H1814 18 HET MG1 J1906 23 HET DGT A 414 31 HET CA A 415 1 HET CA A 416 1 HET CA A 417 1 HET EPE D 1 15 HET DGT B1414 31 HET CA B1415 1 HET CA B1416 1 HET CA B1417 1 HET EPE H1001 15 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM MG1 2'-DEOXY-1-METHYLGUANOSINE 5'-(DIHYDROGEN PHOSPHATE) HETNAM DGT 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE HETNAM CA CALCIUM ION HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EPE HEPES FORMUL 2 DOC 2(C9 H14 N3 O6 P) FORMUL 3 MG1 2(C11 H16 N5 O7 P) FORMUL 7 DGT 2(C10 H16 N5 O13 P3) FORMUL 8 CA 6(CA 2+) FORMUL 11 EPE 2(C8 H18 N2 O4 S) FORMUL 17 HOH *298(H2 O) HELIX 1 1 TYR A 10 ASN A 20 1 11 HELIX 2 2 PRO A 21 LYS A 24 5 4 HELIX 3 3 ASN A 47 LYS A 52 1 6 HELIX 4 4 PRO A 60 LEU A 68 1 9 HELIX 5 5 ARG A 77 GLU A 94 1 18 HELIX 6 6 ASP A 117 LYS A 137 1 21 HELIX 7 7 ASN A 147 LYS A 159 1 13 HELIX 8 8 ASP A 167 LEU A 178 1 12 HELIX 9 9 ASP A 179 VAL A 183 5 5 HELIX 10 10 GLY A 187 LEU A 197 1 11 HELIX 11 11 LYS A 201 SER A 207 5 7 HELIX 12 12 GLU A 209 GLY A 218 1 10 HELIX 13 13 GLY A 218 ARG A 230 1 13 HELIX 14 14 ASN A 257 ASP A 277 1 21 HELIX 15 15 SER A 307 ASP A 326 1 20 HELIX 16 16 TYR B 1010 ASN B 1020 1 11 HELIX 17 17 PRO B 1021 LYS B 1024 5 4 HELIX 18 18 ASN B 1047 LYS B 1052 1 6 HELIX 19 19 PRO B 1060 LEU B 1068 1 9 HELIX 20 20 ARG B 1077 GLU B 1094 1 18 HELIX 21 21 ASP B 1117 LYS B 1137 1 21 HELIX 22 22 ASN B 1147 LYS B 1159 1 13 HELIX 23 23 ASP B 1167 LEU B 1178 1 12 HELIX 24 24 ASP B 1179 VAL B 1183 5 5 HELIX 25 25 GLY B 1187 LEU B 1197 1 11 HELIX 26 26 VAL B 1203 ILE B 1208 1 6 HELIX 27 27 GLU B 1209 GLY B 1218 1 10 HELIX 28 28 GLY B 1218 ARG B 1230 1 13 HELIX 29 29 ASN B 1257 ASP B 1277 1 21 HELIX 30 30 SER B 1307 GLU B 1325 1 19 SHEET 1 A 5 ILE A 99 SER A 103 0 SHEET 2 A 5 GLU A 106 ASP A 110 -1 O TYR A 108 N GLU A 100 SHEET 3 A 5 VAL A 3 PHE A 8 -1 N LEU A 4 O LEU A 109 SHEET 4 A 5 VAL A 140 SER A 145 -1 O GLY A 143 N PHE A 5 SHEET 5 A 5 ILE A 163 VAL A 165 1 O LYS A 164 N ILE A 144 SHEET 1 B 3 GLY A 41 ALA A 46 0 SHEET 2 B 3 VAL A 28 PHE A 33 -1 N VAL A 30 O THR A 45 SHEET 3 B 3 VAL A 72 PRO A 75 1 O LEU A 74 N CYS A 31 SHEET 1 C 4 SER A 244 SER A 255 0 SHEET 2 C 4 ILE A 330 PHE A 340 -1 O PHE A 337 N ILE A 245 SHEET 3 C 4 PRO A 281 THR A 290 -1 N VAL A 289 O ARG A 331 SHEET 4 C 4 ILE A 295 THR A 301 -1 O ARG A 298 N VAL A 286 SHEET 1 D 5 ILE B1099 SER B1103 0 SHEET 2 D 5 GLU B1106 ASP B1110 -1 O TYR B1108 N GLU B1100 SHEET 3 D 5 VAL B1003 PHE B1008 -1 N LEU B1004 O LEU B1109 SHEET 4 D 5 VAL B1140 SER B1145 -1 O GLY B1143 N PHE B1005 SHEET 5 D 5 ILE B1163 VAL B1165 1 O LYS B1164 N ILE B1144 SHEET 1 E 3 GLY B1041 ALA B1046 0 SHEET 2 E 3 VAL B1028 PHE B1033 -1 N VAL B1032 O ALA B1042 SHEET 3 E 3 VAL B1072 PRO B1075 1 O LEU B1074 N CYS B1031 SHEET 1 F 4 SER B1244 SER B1255 0 SHEET 2 F 4 ILE B1330 PHE B1340 -1 O PHE B1337 N ILE B1245 SHEET 3 F 4 PRO B1281 THR B1290 -1 N VAL B1289 O ARG B1331 SHEET 4 F 4 ILE B1295 THR B1301 -1 O VAL B1296 N ALA B1288 LINK O3' DG D 813 P ADOC D 814 1555 1555 1.62 LINK O3' DG D 813 P BDOC D 814 1555 1555 1.61 LINK O3' DC E 905 P MG1 E 906 1555 1555 1.60 LINK O3' MG1 E 906 P DC E 907 1555 1555 1.60 LINK O3' DG H1813 P DOC H1814 1555 1555 1.61 LINK O3' DC J1905 P MG1 J1906 1555 1555 1.59 LINK O3' MG1 J1906 P DC J1907 1555 1555 1.60 LINK OD2 ASP A 7 CA CA A 415 1555 1555 2.32 LINK OD1 ASP A 7 CA CA A 416 1555 1555 2.33 LINK OD2 ASP A 7 CA CA A 416 1555 1555 2.69 LINK O PHE A 8 CA CA A 416 1555 1555 2.31 LINK OD1 ASP A 105 CA CA A 415 1555 1555 2.33 LINK OD2 ASP A 105 CA CA A 416 1555 1555 2.32 LINK OE2 GLU A 106 CA CA A 415 1555 1555 2.33 LINK O ALA A 181 CA CA A 417 1555 1555 2.32 LINK O ILE A 186 CA CA A 417 1555 1555 2.32 LINK O1A DGT A 414 CA CA A 415 1555 1555 2.33 LINK O1B DGT A 414 CA CA A 416 1555 1555 2.33 LINK O1A DGT A 414 CA CA A 416 1555 1555 2.45 LINK O1G DGT A 414 CA CA A 416 1555 1555 2.47 LINK CA CA A 415 O HOH A 519 1555 1555 2.27 LINK CA CA A 415 O HOH A 538 1555 1555 2.31 LINK CA CA A 417 O HOH A 513 1555 1555 2.26 LINK CA CA A 417 O HOH A 515 1555 1555 2.23 LINK CA CA A 417 O HOH A 516 1555 1555 2.37 LINK O HOH B 60 CA CA B1415 1555 1555 2.41 LINK OD2 ASP B1007 CA CA B1415 1555 1555 2.33 LINK OD1 ASP B1007 CA CA B1415 1555 1555 3.08 LINK OD1 ASP B1007 CA CA B1416 1555 1555 2.26 LINK O PHE B1008 CA CA B1416 1555 1555 2.30 LINK OD1 ASP B1105 CA CA B1415 1555 1555 2.33 LINK OD2 ASP B1105 CA CA B1416 1555 1555 2.30 LINK OE2 GLU B1106 CA CA B1415 1555 1555 2.31 LINK O ALA B1181 CA CA B1417 1555 1555 2.32 LINK O ILE B1186 CA CA B1417 1555 1555 2.65 LINK O2A DGT B1414 CA CA B1415 1555 1555 2.32 LINK O2B DGT B1414 CA CA B1416 1555 1555 2.30 LINK O1G DGT B1414 CA CA B1416 1555 1555 2.39 LINK O2A DGT B1414 CA CA B1416 1555 1555 2.43 LINK CA CA B1415 O HOH B1519 1555 1555 2.45 LINK CA CA B1417 O HOH B1514 1555 1555 2.51 LINK CA CA B1417 O HOH B1515 1555 1555 2.30 LINK CA CA B1417 O HOH B1516 1555 1555 2.31 CISPEP 1 LYS A 159 PRO A 160 0 -2.38 CISPEP 2 LYS B 1159 PRO B 1160 0 -0.03 SITE 1 AC1 23 ASP A 7 PHE A 8 TYR A 10 PHE A 11 SITE 2 AC1 23 TYR A 12 ALA A 44 THR A 45 TYR A 48 SITE 3 AC1 23 ARG A 51 ASP A 105 LYS A 159 CA A 415 SITE 4 AC1 23 CA A 416 HOH A 519 HOH A 522 HOH A 532 SITE 5 AC1 23 HOH A 537 HOH A 540 HOH A 598 HOH A 606 SITE 6 AC1 23 HOH A 630 DC E 905 MG1 E 906 SITE 1 AC2 7 ASP A 7 ASP A 105 GLU A 106 DGT A 414 SITE 2 AC2 7 CA A 416 HOH A 519 HOH A 538 SITE 1 AC3 5 ASP A 7 PHE A 8 ASP A 105 DGT A 414 SITE 2 AC3 5 CA A 415 SITE 1 AC4 6 ALA A 181 ILE A 186 HOH A 513 HOH A 515 SITE 2 AC4 6 HOH A 516 DG D 813 SITE 1 AC5 10 ALA A 102 SER A 103 ILE A 104 HOH A 537 SITE 2 AC5 10 HOH D 148 DG D 813 DOC D 814 DC E 907 SITE 3 AC5 10 DT E 908 DA E 909 SITE 1 AC6 20 HOH B 15 HOH B 31 HOH B 64 HOH B 261 SITE 2 AC6 20 ASP B1007 PHE B1008 TYR B1010 PHE B1011 SITE 3 AC6 20 TYR B1012 ALA B1044 THR B1045 TYR B1048 SITE 4 AC6 20 ARG B1051 ASP B1105 LYS B1159 CA B1415 SITE 5 AC6 20 CA B1416 HOH H 122 DC J1905 MG1 J1906 SITE 1 AC7 6 HOH B 60 ASP B1007 ASP B1105 GLU B1106 SITE 2 AC7 6 DGT B1414 HOH B1519 SITE 1 AC8 4 ASP B1007 PHE B1008 ASP B1105 DGT B1414 SITE 1 AC9 6 ALA B1181 ILE B1186 HOH B1514 HOH B1515 SITE 2 AC9 6 HOH B1516 DG H1813 SITE 1 BC1 10 HOH B 121 ALA B1102 SER B1103 ILE B1104 SITE 2 BC1 10 HOH H 122 DG H1813 DOC H1814 DC J1907 SITE 3 BC1 10 DT J1908 DA J1909 CRYST1 52.194 62.077 91.459 98.97 103.82 93.72 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019159 0.001246 0.005012 0.00000 SCALE2 0.000000 0.016143 0.002901 0.00000 SCALE3 0.000000 0.000000 0.011440 0.00000