HEADER UNKNOWN FUNCTION 28-MAR-11 3RB8 TITLE STRUCTURE OF THE PHAGE TUBULIN PHUZ(SEMET)-GDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE 201PHI2-1; SOURCE 3 ORGANISM_TAXID: 198110; SOURCE 4 GENE: 201PHI2-1P059; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TUBULIN, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR D.A.AGARD,J.POGLIANO,J.A.KRAEMER,M.L.ERB,C.A.WADDLING,E.A.MONTABANA, AUTHOR 2 H.WANG,K.NGUYEN,S.PHAM REVDAT 2 23-JAN-13 3RB8 1 JRNL REVDAT 1 04-JUL-12 3RB8 0 JRNL AUTH J.A.KRAEMER,M.L.ERB,C.A.WADDLING,E.A.MONTABANA,E.A.ZEHR, JRNL AUTH 2 H.WANG,K.NGUYEN,D.S.PHAM,D.A.AGARD,J.POGLIANO JRNL TITL A PHAGE TUBULIN ASSEMBLES DYNAMIC FILAMENTS BY AN ATYPICAL JRNL TITL 2 MECHANISM TO CENTER VIRAL DNA WITHIN THE HOST CELL. JRNL REF CELL(CAMBRIDGE,MASS.) V. 149 1488 2012 JRNL REFN ISSN 0092-8674 JRNL PMID 22726436 JRNL DOI 10.1016/J.CELL.2012.04.034 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 18830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1867 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3864 - 6.1095 1.00 1363 156 0.1487 0.2029 REMARK 3 2 6.1095 - 4.8510 1.00 1378 147 0.1451 0.1969 REMARK 3 3 4.8510 - 4.2383 1.00 1348 150 0.1095 0.1678 REMARK 3 4 4.2383 - 3.8510 0.99 1376 141 0.1345 0.2244 REMARK 3 5 3.8510 - 3.5751 0.99 1329 157 0.1500 0.2044 REMARK 3 6 3.5751 - 3.3643 0.98 1346 154 0.1838 0.2490 REMARK 3 7 3.3643 - 3.1959 0.99 1360 151 0.1935 0.3240 REMARK 3 8 3.1959 - 3.0568 0.97 1332 147 0.2061 0.3134 REMARK 3 9 3.0568 - 2.9392 0.94 1271 136 0.2125 0.2815 REMARK 3 10 2.9392 - 2.8377 0.91 1253 138 0.2158 0.3427 REMARK 3 11 2.8377 - 2.7490 0.90 1223 133 0.2336 0.3505 REMARK 3 12 2.7490 - 2.6705 0.88 1203 134 0.2537 0.3643 REMARK 3 13 2.6705 - 2.6000 0.85 1181 123 0.2491 0.3415 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 40.43 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.28660 REMARK 3 B22 (A**2) : -3.24480 REMARK 3 B33 (A**2) : 8.53130 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2487 REMARK 3 ANGLE : 1.141 3385 REMARK 3 CHIRALITY : 0.070 404 REMARK 3 PLANARITY : 0.004 435 REMARK 3 DIHEDRAL : 14.645 922 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 2:32) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4315 4.7768 -1.7166 REMARK 3 T TENSOR REMARK 3 T11: 0.6371 T22: 0.2404 REMARK 3 T33: 0.6271 T12: 0.0575 REMARK 3 T13: -0.3866 T23: -0.0387 REMARK 3 L TENSOR REMARK 3 L11: 0.4376 L22: 0.2989 REMARK 3 L33: 0.3723 L12: -0.1173 REMARK 3 L13: 0.1835 L23: 0.0534 REMARK 3 S TENSOR REMARK 3 S11: -0.2409 S12: -0.0226 S13: 0.0966 REMARK 3 S21: 0.3750 S22: 0.0152 S23: -0.2567 REMARK 3 S31: -0.4987 S32: 0.1391 S33: -0.0396 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 33:59) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3378 1.2578 2.7740 REMARK 3 T TENSOR REMARK 3 T11: 1.0642 T22: 0.6127 REMARK 3 T33: 1.0126 T12: 0.1336 REMARK 3 T13: -0.6223 T23: -0.1859 REMARK 3 L TENSOR REMARK 3 L11: 0.2574 L22: 0.9652 REMARK 3 L33: 1.3724 L12: 0.1223 REMARK 3 L13: -0.4037 L23: -0.9981 REMARK 3 S TENSOR REMARK 3 S11: -0.6739 S12: 0.0922 S13: 1.0339 REMARK 3 S21: -0.1421 S22: -0.2885 S23: -0.2168 REMARK 3 S31: -0.8433 S32: 0.1541 S33: -0.3363 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 60:94) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8419 -7.5469 0.4418 REMARK 3 T TENSOR REMARK 3 T11: 0.6524 T22: 0.4547 REMARK 3 T33: 0.3370 T12: 0.1498 REMARK 3 T13: -0.1345 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 0.3878 L22: 1.2592 REMARK 3 L33: 0.3549 L12: -0.1716 REMARK 3 L13: 0.1849 L23: -0.6157 REMARK 3 S TENSOR REMARK 3 S11: -0.1435 S12: -0.3146 S13: 0.1726 REMARK 3 S21: 0.7655 S22: 0.3376 S23: -0.1374 REMARK 3 S31: -0.3441 S32: -0.0830 S33: 0.0542 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 95:143) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6162 -10.2373 -9.1494 REMARK 3 T TENSOR REMARK 3 T11: 0.3654 T22: 0.2277 REMARK 3 T33: 0.2402 T12: 0.0489 REMARK 3 T13: -0.0838 T23: 0.0166 REMARK 3 L TENSOR REMARK 3 L11: 1.1826 L22: 1.3256 REMARK 3 L33: 0.3878 L12: -0.1424 REMARK 3 L13: 0.3951 L23: 0.3443 REMARK 3 S TENSOR REMARK 3 S11: -0.0761 S12: 0.1502 S13: 0.0520 REMARK 3 S21: 0.4865 S22: 0.1355 S23: -0.0110 REMARK 3 S31: 0.3279 S32: 0.0970 S33: -0.0291 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 144:160) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4398 -4.8005 -16.0528 REMARK 3 T TENSOR REMARK 3 T11: 0.4147 T22: 0.4572 REMARK 3 T33: 0.3691 T12: -0.0609 REMARK 3 T13: 0.0416 T23: 0.0634 REMARK 3 L TENSOR REMARK 3 L11: 0.0576 L22: 0.9841 REMARK 3 L33: 1.3251 L12: 0.1788 REMARK 3 L13: 0.0959 L23: -0.3975 REMARK 3 S TENSOR REMARK 3 S11: -0.2244 S12: -0.1420 S13: 0.0535 REMARK 3 S21: -0.0748 S22: -0.0012 S23: -0.3685 REMARK 3 S31: 0.0384 S32: 0.1337 S33: 0.1099 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 161:178) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3084 7.4044 -13.4600 REMARK 3 T TENSOR REMARK 3 T11: 0.8194 T22: -0.0133 REMARK 3 T33: 0.6451 T12: -0.0155 REMARK 3 T13: -0.4026 T23: 0.1721 REMARK 3 L TENSOR REMARK 3 L11: 0.0472 L22: 1.0535 REMARK 3 L33: 0.3613 L12: -0.2227 REMARK 3 L13: 0.0754 L23: -0.3535 REMARK 3 S TENSOR REMARK 3 S11: -0.1019 S12: -0.0518 S13: 0.2332 REMARK 3 S21: 0.0428 S22: -0.1802 S23: -0.7389 REMARK 3 S31: -0.1497 S32: 0.2202 S33: -0.3389 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 179:214) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4030 -4.6901 -12.2029 REMARK 3 T TENSOR REMARK 3 T11: 0.3522 T22: 0.6025 REMARK 3 T33: 0.6554 T12: -0.0259 REMARK 3 T13: 0.0556 T23: 0.0397 REMARK 3 L TENSOR REMARK 3 L11: 0.3312 L22: 1.5603 REMARK 3 L33: 0.6330 L12: -0.1326 REMARK 3 L13: 0.3471 L23: 0.4785 REMARK 3 S TENSOR REMARK 3 S11: 0.0613 S12: -0.4202 S13: -0.1868 REMARK 3 S21: -0.1545 S22: -0.1649 S23: 1.0436 REMARK 3 S31: 0.0081 S32: -0.4157 S33: 0.0630 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 215:238) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1523 3.5360 -23.9418 REMARK 3 T TENSOR REMARK 3 T11: 0.5746 T22: 0.3561 REMARK 3 T33: 0.6366 T12: 0.0381 REMARK 3 T13: -0.6264 T23: 0.1298 REMARK 3 L TENSOR REMARK 3 L11: 0.5000 L22: 0.9815 REMARK 3 L33: 0.4134 L12: -0.0394 REMARK 3 L13: -0.4166 L23: -0.1673 REMARK 3 S TENSOR REMARK 3 S11: -0.7129 S12: 0.4377 S13: 0.3982 REMARK 3 S21: -0.7006 S22: -0.2493 S23: 0.0880 REMARK 3 S31: -0.7716 S32: 0.1361 S33: -1.1284 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 239:271) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2321 5.7334 -18.2082 REMARK 3 T TENSOR REMARK 3 T11: 0.4966 T22: 0.4976 REMARK 3 T33: 0.6915 T12: 0.1734 REMARK 3 T13: -0.2825 T23: -0.0677 REMARK 3 L TENSOR REMARK 3 L11: 1.3228 L22: 1.2904 REMARK 3 L33: 0.5104 L12: -0.5100 REMARK 3 L13: -0.5542 L23: -0.3410 REMARK 3 S TENSOR REMARK 3 S11: -0.4024 S12: -0.0795 S13: 0.4734 REMARK 3 S21: -0.3468 S22: 0.0751 S23: 0.5228 REMARK 3 S31: -0.5750 S32: -0.5213 S33: -0.5398 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 272:294) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4310 -13.4639 -24.7090 REMARK 3 T TENSOR REMARK 3 T11: 0.4508 T22: 0.6621 REMARK 3 T33: 0.4001 T12: -0.1126 REMARK 3 T13: 0.0226 T23: -0.0905 REMARK 3 L TENSOR REMARK 3 L11: 0.4177 L22: 0.9921 REMARK 3 L33: 1.5117 L12: 0.0838 REMARK 3 L13: -0.4826 L23: 0.3668 REMARK 3 S TENSOR REMARK 3 S11: -0.3794 S12: 0.4884 S13: 0.1639 REMARK 3 S21: -0.1978 S22: 0.2387 S23: -0.5352 REMARK 3 S31: -0.0032 S32: 0.2427 S33: 0.0568 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 295:315) REMARK 3 ORIGIN FOR THE GROUP (A): 49.9479 -20.4309 -13.0733 REMARK 3 T TENSOR REMARK 3 T11: 0.5422 T22: 0.5183 REMARK 3 T33: 0.5026 T12: -0.0496 REMARK 3 T13: -0.0752 T23: 0.0672 REMARK 3 L TENSOR REMARK 3 L11: 2.3849 L22: 2.9910 REMARK 3 L33: 0.5958 L12: -1.1648 REMARK 3 L13: -0.1854 L23: 0.1304 REMARK 3 S TENSOR REMARK 3 S11: -0.1396 S12: 0.3501 S13: -0.5466 REMARK 3 S21: 0.9078 S22: 0.1846 S23: 0.5487 REMARK 3 S31: 0.4390 S32: -0.1196 S33: 0.0286 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RB8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAR-11. REMARK 100 THE RCSB ID CODE IS RCSB064716. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97201, 0.97969 REMARK 200 MONOCHROMATOR : DOUBLE FLAT CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23023 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 46.379 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 6000, 0.1M HEPES, 0.5M REMARK 280 AMMONIUM ACETATE, 0.05M MGCL2, PH 7.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.49050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.37900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.03100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.37900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.49050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.03100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 107 O HOH A 323 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 54 62.02 36.72 REMARK 500 ALA A 56 -89.79 -109.56 REMARK 500 HIS A 145 79.50 46.57 REMARK 500 LEU A 146 132.38 -170.80 REMARK 500 ARG A 185 -14.52 76.44 REMARK 500 LEU A 230 110.73 -160.73 REMARK 500 ASP A 309 -169.92 -77.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 328 O REMARK 620 2 GDP A 400 O1B 72.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3R4V RELATED DB: PDB REMARK 900 SAME PROTEIN, WILD-TYPE DBREF 3RB8 A 2 315 UNP B3FK34 B3FK34_9CAUD 2 315 SEQADV 3RB8 SER A 1 UNP B3FK34 EXPRESSION TAG SEQRES 1 A 315 SER PRO VAL LYS VAL CYS LEU ILE PHE ALA GLY GLY THR SEQRES 2 A 315 GLY MSE ASN VAL ALA THR LYS LEU VAL ASP LEU GLY GLU SEQRES 3 A 315 ALA VAL HIS CYS PHE ASP THR CYS ASP LYS ASN VAL VAL SEQRES 4 A 315 ASP VAL HIS ARG SER VAL ASN VAL THR LEU THR LYS GLY SEQRES 5 A 315 THR ARG GLY ALA GLY GLY ASN ARG LYS VAL ILE LEU PRO SEQRES 6 A 315 LEU VAL ARG PRO GLN ILE PRO ALA LEU MSE ASP THR ILE SEQRES 7 A 315 PRO GLU ALA ASP PHE TYR ILE VAL CYS TYR SER LEU GLY SEQRES 8 A 315 GLY GLY SER GLY SER VAL LEU GLY PRO LEU ILE THR GLY SEQRES 9 A 315 GLN LEU ALA ASP ARG LYS ALA SER PHE VAL SER PHE VAL SEQRES 10 A 315 VAL GLY ALA MSE GLU SER THR ASP ASN LEU GLY ASN ASP SEQRES 11 A 315 ILE ASP THR MSE LYS THR LEU GLU ALA ILE ALA VAL ASN SEQRES 12 A 315 LYS HIS LEU PRO ILE VAL VAL ASN TYR VAL PRO ASN THR SEQRES 13 A 315 GLN GLY ARG SER TYR GLU SER ILE ASN ASP GLU ILE ALA SEQRES 14 A 315 GLU LYS ILE ARG LYS VAL VAL LEU LEU VAL ASN GLN ASN SEQRES 15 A 315 HIS GLY ARG LEU ASP VAL HIS ASP VAL ALA ASN TRP VAL SEQRES 16 A 315 ARG PHE THR ASP LYS HIS ASN TYR LEU ILE PRO GLN VAL SEQRES 17 A 315 CYS GLU LEU HIS ILE GLU THR THR ARG LYS ASP ALA GLU SEQRES 18 A 315 ASN VAL PRO GLU ALA ILE SER GLN LEU SER LEU TYR LEU SEQRES 19 A 315 ASP PRO SER LYS GLU VAL ALA PHE GLY THR PRO ILE TYR SEQRES 20 A 315 ARG LYS VAL GLY ILE MSE LYS VAL ASP ASP LEU ASP VAL SEQRES 21 A 315 THR ASP ASP GLN ILE HIS PHE VAL ILE ASN SER VAL GLY SEQRES 22 A 315 VAL VAL GLU ILE MSE LYS THR ILE THR ASP SER LYS LEU SEQRES 23 A 315 GLU MSE THR ARG GLN GLN SER LYS PHE THR GLN ARG ASN SEQRES 24 A 315 PRO ILE ILE ASP ALA ASP ASP ASN VAL ASP GLU ASP GLY SEQRES 25 A 315 MSE VAL VAL MODRES 3RB8 MSE A 15 MET SELENOMETHIONINE MODRES 3RB8 MSE A 75 MET SELENOMETHIONINE MODRES 3RB8 MSE A 121 MET SELENOMETHIONINE MODRES 3RB8 MSE A 134 MET SELENOMETHIONINE MODRES 3RB8 MSE A 253 MET SELENOMETHIONINE MODRES 3RB8 MSE A 278 MET SELENOMETHIONINE MODRES 3RB8 MSE A 288 MET SELENOMETHIONINE MODRES 3RB8 MSE A 313 MET SELENOMETHIONINE HET MSE A 15 8 HET MSE A 75 8 HET MSE A 121 8 HET MSE A 134 8 HET MSE A 253 8 HET MSE A 278 8 HET MSE A 288 8 HET MSE A 313 8 HET GDP A 400 28 HET MG A 401 1 HETNAM MSE SELENOMETHIONINE HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 GDP C10 H15 N5 O11 P2 FORMUL 3 MG MG 2+ FORMUL 4 HOH *14(H2 O) HELIX 1 1 GLY A 11 THR A 19 1 9 HELIX 2 2 LYS A 20 GLU A 26 5 7 HELIX 3 3 VAL A 39 ARG A 43 5 5 HELIX 4 4 ASN A 59 ARG A 68 1 10 HELIX 5 5 GLN A 70 THR A 77 1 8 HELIX 6 6 SER A 94 ARG A 109 1 16 HELIX 7 7 SER A 123 HIS A 145 1 23 HELIX 8 8 SER A 160 VAL A 179 1 20 HELIX 9 9 ASP A 187 ARG A 196 1 10 HELIX 10 10 PHE A 197 LYS A 200 5 4 HELIX 11 11 THR A 216 ASN A 222 1 7 HELIX 12 12 ASP A 235 GLU A 239 5 5 HELIX 13 13 GLY A 273 SER A 293 1 21 SHEET 1 A10 ASN A 46 LEU A 49 0 SHEET 2 A10 VAL A 28 ASP A 32 1 N CYS A 30 O ASN A 46 SHEET 3 A10 CYS A 6 ALA A 10 1 N LEU A 7 O HIS A 29 SHEET 4 A10 TYR A 84 SER A 89 1 O ILE A 85 N ILE A 8 SHEET 5 A10 PHE A 113 GLY A 119 1 O PHE A 116 N VAL A 86 SHEET 6 A10 ILE A 148 PRO A 154 1 O ASN A 151 N SER A 115 SHEET 7 A10 VAL A 208 GLU A 214 1 O CYS A 209 N VAL A 150 SHEET 8 A10 GLN A 264 ASN A 270 -1 O ASN A 270 N GLU A 210 SHEET 9 A10 SER A 231 TYR A 233 -1 N LEU A 232 O ILE A 265 SHEET 10 A10 VAL A 250 ILE A 252 1 O GLY A 251 N SER A 231 LINK C GLY A 14 N MSE A 15 1555 1555 1.33 LINK C MSE A 15 N ASN A 16 1555 1555 1.32 LINK C LEU A 74 N MSE A 75 1555 1555 1.33 LINK C MSE A 75 N ASP A 76 1555 1555 1.33 LINK C ALA A 120 N MSE A 121 1555 1555 1.33 LINK C MSE A 121 N GLU A 122 1555 1555 1.34 LINK C THR A 133 N MSE A 134 1555 1555 1.33 LINK C MSE A 134 N LYS A 135 1555 1555 1.34 LINK C ILE A 252 N MSE A 253 1555 1555 1.33 LINK C MSE A 253 N LYS A 254 1555 1555 1.33 LINK C ILE A 277 N MSE A 278 1555 1555 1.34 LINK C MSE A 278 N LYS A 279 1555 1555 1.33 LINK C GLU A 287 N MSE A 288 1555 1555 1.33 LINK C MSE A 288 N THR A 289 1555 1555 1.33 LINK C GLY A 312 N MSE A 313 1555 1555 1.33 LINK C MSE A 313 N VAL A 314 1555 1555 1.33 LINK MG MG A 401 O HOH A 328 1555 1555 2.45 LINK O1B GDP A 400 MG MG A 401 1555 1555 2.81 CISPEP 1 GLY A 57 GLY A 58 0 4.39 SITE 1 AC1 18 GLY A 11 GLY A 12 THR A 13 ASN A 16 SITE 2 AC1 18 SER A 89 GLY A 92 GLY A 93 SER A 94 SITE 3 AC1 18 GLY A 95 ALA A 120 GLU A 122 ASN A 126 SITE 4 AC1 18 ASN A 155 TYR A 161 ILE A 164 ASN A 165 SITE 5 AC1 18 HOH A 316 MG A 401 SITE 1 AC2 2 HOH A 328 GDP A 400 CRYST1 46.981 76.062 92.758 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021285 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013147 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010781 0.00000