data_3RDC # _entry.id 3RDC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RDC pdb_00003rdc 10.2210/pdb3rdc/pdb RCSB RCSB064791 ? ? WWPDB D_1000064791 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3R49 . unspecified PDB 3R4G . unspecified PDB 3R54 . unspecified PDB 3R56 . unspecified PDB 3R57 . unspecified PDB 3R59 . unspecified PDB 3RCF . unspecified PDB 3RCG . unspecified PDB 3RCI . unspecified PDB 3RCK . unspecified PDB 3RCL . unspecified PDB 3RD9 . unspecified PDB 3RDA . unspecified PDB 3RDB . unspecified PDB 3RDD . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RDC _pdbx_database_status.recvd_initial_deposition_date 2011-04-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Colliandre, L.' 1 'Ahmed-Belkacem, H.' 2 'Bessin, Y.' 3 'Pawlotsky, J.M.' 4 'Guichou, J.F.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Combining 'dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography. ; 'Acta Crystallogr.,Sect.D' 71 1777 1787 2015 ABCRE6 DK 0907-4449 0766 ? 26249358 10.1107/S1399004715010342 1 'Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.' 'Nat Commun' 7 12777 12777 2016 ? UK 2041-1723 ? ? 27652979 10.1038/ncomms12777 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gelin, M.' 1 ? primary 'Delfosse, V.' 2 ? primary 'Allemand, F.' 3 ? primary 'Hoh, F.' 4 ? primary 'Sallaz-Damaz, Y.' 5 ? primary 'Pirocchi, M.' 6 ? primary 'Bourguet, W.' 7 ? primary 'Ferrer, J.L.' 8 ? primary 'Labesse, G.' 9 ? primary 'Guichou, J.F.' 10 ? 1 'Ahmed-Belkacem, A.' 11 ? 1 'Colliandre, L.' 12 ? 1 'Ahnou, N.' 13 ? 1 'Nevers, Q.' 14 ? 1 'Gelin, M.' 15 ? 1 'Bessin, Y.' 16 ? 1 'Brillet, R.' 17 ? 1 'Cala, O.' 18 ? 1 'Douguet, D.' 19 ? 1 'Bourguet, W.' 20 ? 1 'Krimm, I.' 21 ? 1 'Pawlotsky, J.M.' 22 ? 1 'Guichou, J.F.' 23 ? # _cell.entry_id 3RDC _cell.length_a 56.445 _cell.length_b 56.445 _cell.length_c 86.995 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RDC _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidyl-prolyl cis-trans isomerase F, mitochondrial' 17870.400 1 5.2.1.8 K175I 'UNP residues 43-207' ? 2 non-polymer syn 'ethyl N-[(4-aminobenzyl)carbamoyl]glycinate' 251.282 1 ? ? ? ? 3 water nat water 18.015 223 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PPIase F, Cyclophilin F, Rotamase F' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIY GSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVIT DCGQLS ; _entity_poly.pdbx_seq_one_letter_code_can ;MSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIY GSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVIT DCGQLS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 GLY n 1 4 ASN n 1 5 PRO n 1 6 LEU n 1 7 VAL n 1 8 TYR n 1 9 LEU n 1 10 ASP n 1 11 VAL n 1 12 ASP n 1 13 ALA n 1 14 ASN n 1 15 GLY n 1 16 LYS n 1 17 PRO n 1 18 LEU n 1 19 GLY n 1 20 ARG n 1 21 VAL n 1 22 VAL n 1 23 LEU n 1 24 GLU n 1 25 LEU n 1 26 LYS n 1 27 ALA n 1 28 ASP n 1 29 VAL n 1 30 VAL n 1 31 PRO n 1 32 LYS n 1 33 THR n 1 34 ALA n 1 35 GLU n 1 36 ASN n 1 37 PHE n 1 38 ARG n 1 39 ALA n 1 40 LEU n 1 41 CYS n 1 42 THR n 1 43 GLY n 1 44 GLU n 1 45 LYS n 1 46 GLY n 1 47 PHE n 1 48 GLY n 1 49 TYR n 1 50 LYS n 1 51 GLY n 1 52 SER n 1 53 THR n 1 54 PHE n 1 55 HIS n 1 56 ARG n 1 57 VAL n 1 58 ILE n 1 59 PRO n 1 60 SER n 1 61 PHE n 1 62 MET n 1 63 CYS n 1 64 GLN n 1 65 ALA n 1 66 GLY n 1 67 ASP n 1 68 PHE n 1 69 THR n 1 70 ASN n 1 71 HIS n 1 72 ASN n 1 73 GLY n 1 74 THR n 1 75 GLY n 1 76 GLY n 1 77 LYS n 1 78 SER n 1 79 ILE n 1 80 TYR n 1 81 GLY n 1 82 SER n 1 83 ARG n 1 84 PHE n 1 85 PRO n 1 86 ASP n 1 87 GLU n 1 88 ASN n 1 89 PHE n 1 90 THR n 1 91 LEU n 1 92 LYS n 1 93 HIS n 1 94 VAL n 1 95 GLY n 1 96 PRO n 1 97 GLY n 1 98 VAL n 1 99 LEU n 1 100 SER n 1 101 MET n 1 102 ALA n 1 103 ASN n 1 104 ALA n 1 105 GLY n 1 106 PRO n 1 107 ASN n 1 108 THR n 1 109 ASN n 1 110 GLY n 1 111 SER n 1 112 GLN n 1 113 PHE n 1 114 PHE n 1 115 ILE n 1 116 CYS n 1 117 THR n 1 118 ILE n 1 119 LYS n 1 120 THR n 1 121 ASP n 1 122 TRP n 1 123 LEU n 1 124 ASP n 1 125 GLY n 1 126 LYS n 1 127 HIS n 1 128 VAL n 1 129 VAL n 1 130 PHE n 1 131 GLY n 1 132 HIS n 1 133 VAL n 1 134 ILE n 1 135 GLU n 1 136 GLY n 1 137 MET n 1 138 ASP n 1 139 VAL n 1 140 VAL n 1 141 LYS n 1 142 LYS n 1 143 ILE n 1 144 GLU n 1 145 SER n 1 146 PHE n 1 147 GLY n 1 148 SER n 1 149 LYS n 1 150 SER n 1 151 GLY n 1 152 ARG n 1 153 THR n 1 154 SER n 1 155 LYS n 1 156 LYS n 1 157 ILE n 1 158 VAL n 1 159 ILE n 1 160 THR n 1 161 ASP n 1 162 CYS n 1 163 GLY n 1 164 GLN n 1 165 LEU n 1 166 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PPIF, CYP3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PPIF_HUMAN _struct_ref.pdbx_db_accession P30405 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITD CGQLS ; _struct_ref.pdbx_align_begin 43 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RDC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 166 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P30405 _struct_ref_seq.db_align_beg 43 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 207 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 43 _struct_ref_seq.pdbx_auth_seq_align_end 207 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3RDC MET A 1 ? UNP P30405 ? ? 'initiating methionine' 42 1 1 3RDC ILE A 134 ? UNP P30405 LYS 175 'engineered mutation' 175 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EA4 non-polymer . 'ethyl N-[(4-aminobenzyl)carbamoyl]glycinate' ? 'C12 H17 N3 O3' 251.282 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3RDC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.94 _exptl_crystal.density_percent_sol 36.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.3 _exptl_crystal_grow.pdbx_details '30% PEG4000, pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2008-10-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'yale mirror' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3RDC _reflns.observed_criterion_sigma_I 9.1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 28.2 _reflns.d_resolution_high 1.93 _reflns.number_obs 10358 _reflns.number_all 10623 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.059 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.93 _reflns_shell.d_res_low 1.987 _reflns_shell.percent_possible_all 84.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.188 _reflns_shell.meanI_over_sigI_obs 3.5 _reflns_shell.pdbx_redundancy 4.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3RDC _refine.ls_number_reflns_obs 10358 _refine.ls_number_reflns_all 10623 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.79 _refine.ls_d_res_high 1.94 _refine.ls_percent_reflns_obs 98.99 _refine.ls_R_factor_obs 0.20781 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20461 _refine.ls_R_factor_R_free 0.27014 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 529 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.908 _refine.correlation_coeff_Fo_to_Fc_free 0.853 _refine.B_iso_mean 12.287 _refine.aniso_B[1][1] -0.58 _refine.aniso_B[2][2] -0.58 _refine.aniso_B[3][3] 1.15 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 2BIT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.201 _refine.overall_SU_ML 0.130 _refine.overall_SU_B 4.259 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.232 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1232 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 223 _refine_hist.number_atoms_total 1473 _refine_hist.d_res_high 1.94 _refine_hist.d_res_low 25.79 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.022 ? 1277 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.002 0.020 ? 865 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.063 1.962 ? 1721 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.809 3.003 ? 2102 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.879 5.000 ? 163 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 33.292 24.510 ? 51 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 10.362 15.000 ? 208 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 12.106 15.000 ? 4 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.063 0.200 ? 186 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.004 0.021 ? 1439 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 256 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.349 1.500 ? 810 ? 'X-RAY DIFFRACTION' r_mcbond_other 0.084 1.500 ? 345 ? 'X-RAY DIFFRACTION' r_mcangle_it 0.605 2.000 ? 1301 ? 'X-RAY DIFFRACTION' r_scbond_it 0.970 3.000 ? 467 ? 'X-RAY DIFFRACTION' r_scangle_it 1.477 4.500 ? 420 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.937 _refine_ls_shell.d_res_low 1.987 _refine_ls_shell.number_reflns_R_work 672 _refine_ls_shell.R_factor_R_work 0.186 _refine_ls_shell.percent_reflns_obs 90.66 _refine_ls_shell.R_factor_R_free 0.340 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 37 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3RDC _struct.title 'Human Cyclophilin D Complexed with an Inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RDC _struct_keywords.pdbx_keywords 'ISOMERASE/ISOMERASE INHIBITOR' _struct_keywords.text 'beta barrel, prolyl cis/trans isomerase, mitochondria, inhibitor, ISOMERASE-ISOMERASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 30 ? GLY A 43 ? VAL A 71 GLY A 84 1 ? 14 HELX_P HELX_P2 2 THR A 120 ? ASP A 124 ? THR A 161 ASP A 165 5 ? 5 HELX_P HELX_P3 3 GLY A 136 ? PHE A 146 ? GLY A 177 PHE A 187 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 54 ? ILE A 58 ? PHE A 95 ILE A 99 A 2 MET A 62 ? ALA A 65 ? MET A 103 ALA A 106 A 3 PHE A 113 ? CYS A 116 ? PHE A 154 CYS A 157 A 4 VAL A 98 ? MET A 101 ? VAL A 139 MET A 142 A 5 VAL A 129 ? GLU A 135 ? VAL A 170 GLU A 176 A 6 LYS A 16 ? LEU A 25 ? LYS A 57 LEU A 66 A 7 LEU A 6 ? ALA A 13 ? LEU A 47 ALA A 54 A 8 ILE A 157 ? GLN A 164 ? ILE A 198 GLN A 205 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 56 ? N ARG A 97 O GLN A 64 ? O GLN A 105 A 2 3 N ALA A 65 ? N ALA A 106 O PHE A 113 ? O PHE A 154 A 3 4 O PHE A 114 ? O PHE A 155 N SER A 100 ? N SER A 141 A 4 5 N LEU A 99 ? N LEU A 140 O GLY A 131 ? O GLY A 172 A 5 6 O GLU A 135 ? O GLU A 176 N VAL A 22 ? N VAL A 63 A 6 7 O LEU A 18 ? O LEU A 59 N VAL A 11 ? N VAL A 52 A 7 8 N ASP A 10 ? N ASP A 51 O ASP A 161 ? O ASP A 202 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EA4 _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE EA4 A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 ARG A 56 ? ARG A 97 . ? 1_555 ? 2 AC1 14 GLN A 64 ? GLN A 105 . ? 1_555 ? 3 AC1 14 GLY A 73 ? GLY A 114 . ? 1_555 ? 4 AC1 14 ARG A 83 ? ARG A 124 . ? 1_555 ? 5 AC1 14 ALA A 102 ? ALA A 143 . ? 1_555 ? 6 AC1 14 ASN A 103 ? ASN A 144 . ? 1_555 ? 7 AC1 14 THR A 108 ? THR A 149 . ? 1_555 ? 8 AC1 14 GLY A 110 ? GLY A 151 . ? 1_555 ? 9 AC1 14 GLN A 112 ? GLN A 153 . ? 1_555 ? 10 AC1 14 PHE A 114 ? PHE A 155 . ? 1_555 ? 11 AC1 14 HIS A 127 ? HIS A 168 . ? 1_555 ? 12 AC1 14 HOH C . ? HOH A 283 . ? 1_555 ? 13 AC1 14 HOH C . ? HOH A 303 . ? 1_555 ? 14 AC1 14 HOH C . ? HOH A 315 . ? 4_454 ? # _database_PDB_matrix.entry_id 3RDC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3RDC _atom_sites.fract_transf_matrix[1][1] 0.017716 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017716 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011495 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 42 ? ? ? A . n A 1 2 SER 2 43 ? ? ? A . n A 1 3 GLY 3 44 44 GLY GLY A . n A 1 4 ASN 4 45 45 ASN ASN A . n A 1 5 PRO 5 46 46 PRO PRO A . n A 1 6 LEU 6 47 47 LEU LEU A . n A 1 7 VAL 7 48 48 VAL VAL A . n A 1 8 TYR 8 49 49 TYR TYR A . n A 1 9 LEU 9 50 50 LEU LEU A . n A 1 10 ASP 10 51 51 ASP ASP A . n A 1 11 VAL 11 52 52 VAL VAL A . n A 1 12 ASP 12 53 53 ASP ASP A . n A 1 13 ALA 13 54 54 ALA ALA A . n A 1 14 ASN 14 55 55 ASN ASN A . n A 1 15 GLY 15 56 56 GLY GLY A . n A 1 16 LYS 16 57 57 LYS LYS A . n A 1 17 PRO 17 58 58 PRO PRO A . n A 1 18 LEU 18 59 59 LEU LEU A . n A 1 19 GLY 19 60 60 GLY GLY A . n A 1 20 ARG 20 61 61 ARG ARG A . n A 1 21 VAL 21 62 62 VAL VAL A . n A 1 22 VAL 22 63 63 VAL VAL A . n A 1 23 LEU 23 64 64 LEU LEU A . n A 1 24 GLU 24 65 65 GLU GLU A . n A 1 25 LEU 25 66 66 LEU LEU A . n A 1 26 LYS 26 67 67 LYS LYS A . n A 1 27 ALA 27 68 68 ALA ALA A . n A 1 28 ASP 28 69 69 ASP ASP A . n A 1 29 VAL 29 70 70 VAL VAL A . n A 1 30 VAL 30 71 71 VAL VAL A . n A 1 31 PRO 31 72 72 PRO PRO A . n A 1 32 LYS 32 73 73 LYS LYS A . n A 1 33 THR 33 74 74 THR THR A . n A 1 34 ALA 34 75 75 ALA ALA A . n A 1 35 GLU 35 76 76 GLU GLU A . n A 1 36 ASN 36 77 77 ASN ASN A . n A 1 37 PHE 37 78 78 PHE PHE A . n A 1 38 ARG 38 79 79 ARG ARG A . n A 1 39 ALA 39 80 80 ALA ALA A . n A 1 40 LEU 40 81 81 LEU LEU A . n A 1 41 CYS 41 82 82 CYS CYS A . n A 1 42 THR 42 83 83 THR THR A . n A 1 43 GLY 43 84 84 GLY GLY A . n A 1 44 GLU 44 85 85 GLU GLU A . n A 1 45 LYS 45 86 86 LYS LYS A . n A 1 46 GLY 46 87 87 GLY GLY A . n A 1 47 PHE 47 88 88 PHE PHE A . n A 1 48 GLY 48 89 89 GLY GLY A . n A 1 49 TYR 49 90 90 TYR TYR A . n A 1 50 LYS 50 91 91 LYS LYS A . n A 1 51 GLY 51 92 92 GLY GLY A . n A 1 52 SER 52 93 93 SER SER A . n A 1 53 THR 53 94 94 THR THR A . n A 1 54 PHE 54 95 95 PHE PHE A . n A 1 55 HIS 55 96 96 HIS HIS A . n A 1 56 ARG 56 97 97 ARG ARG A . n A 1 57 VAL 57 98 98 VAL VAL A . n A 1 58 ILE 58 99 99 ILE ILE A . n A 1 59 PRO 59 100 100 PRO PRO A . n A 1 60 SER 60 101 101 SER SER A . n A 1 61 PHE 61 102 102 PHE PHE A . n A 1 62 MET 62 103 103 MET MET A . n A 1 63 CYS 63 104 104 CYS CYS A . n A 1 64 GLN 64 105 105 GLN GLN A . n A 1 65 ALA 65 106 106 ALA ALA A . n A 1 66 GLY 66 107 107 GLY GLY A . n A 1 67 ASP 67 108 108 ASP ASP A . n A 1 68 PHE 68 109 109 PHE PHE A . n A 1 69 THR 69 110 110 THR THR A . n A 1 70 ASN 70 111 111 ASN ASN A . n A 1 71 HIS 71 112 112 HIS HIS A . n A 1 72 ASN 72 113 113 ASN ASN A . n A 1 73 GLY 73 114 114 GLY GLY A . n A 1 74 THR 74 115 115 THR THR A . n A 1 75 GLY 75 116 116 GLY GLY A . n A 1 76 GLY 76 117 117 GLY GLY A . n A 1 77 LYS 77 118 118 LYS LYS A . n A 1 78 SER 78 119 119 SER SER A . n A 1 79 ILE 79 120 120 ILE ILE A . n A 1 80 TYR 80 121 121 TYR TYR A . n A 1 81 GLY 81 122 122 GLY GLY A . n A 1 82 SER 82 123 123 SER SER A . n A 1 83 ARG 83 124 124 ARG ARG A . n A 1 84 PHE 84 125 125 PHE PHE A . n A 1 85 PRO 85 126 126 PRO PRO A . n A 1 86 ASP 86 127 127 ASP ASP A . n A 1 87 GLU 87 128 128 GLU GLU A . n A 1 88 ASN 88 129 129 ASN ASN A . n A 1 89 PHE 89 130 130 PHE PHE A . n A 1 90 THR 90 131 131 THR THR A . n A 1 91 LEU 91 132 132 LEU LEU A . n A 1 92 LYS 92 133 133 LYS LYS A . n A 1 93 HIS 93 134 134 HIS HIS A . n A 1 94 VAL 94 135 135 VAL VAL A . n A 1 95 GLY 95 136 136 GLY GLY A . n A 1 96 PRO 96 137 137 PRO PRO A . n A 1 97 GLY 97 138 138 GLY GLY A . n A 1 98 VAL 98 139 139 VAL VAL A . n A 1 99 LEU 99 140 140 LEU LEU A . n A 1 100 SER 100 141 141 SER SER A . n A 1 101 MET 101 142 142 MET MET A . n A 1 102 ALA 102 143 143 ALA ALA A . n A 1 103 ASN 103 144 144 ASN ASN A . n A 1 104 ALA 104 145 145 ALA ALA A . n A 1 105 GLY 105 146 146 GLY GLY A . n A 1 106 PRO 106 147 147 PRO PRO A . n A 1 107 ASN 107 148 148 ASN ASN A . n A 1 108 THR 108 149 149 THR THR A . n A 1 109 ASN 109 150 150 ASN ASN A . n A 1 110 GLY 110 151 151 GLY GLY A . n A 1 111 SER 111 152 152 SER SER A . n A 1 112 GLN 112 153 153 GLN GLN A . n A 1 113 PHE 113 154 154 PHE PHE A . n A 1 114 PHE 114 155 155 PHE PHE A . n A 1 115 ILE 115 156 156 ILE ILE A . n A 1 116 CYS 116 157 157 CYS CYS A . n A 1 117 THR 117 158 158 THR THR A . n A 1 118 ILE 118 159 159 ILE ILE A . n A 1 119 LYS 119 160 160 LYS LYS A . n A 1 120 THR 120 161 161 THR THR A . n A 1 121 ASP 121 162 162 ASP ASP A . n A 1 122 TRP 122 163 163 TRP TRP A . n A 1 123 LEU 123 164 164 LEU LEU A . n A 1 124 ASP 124 165 165 ASP ASP A . n A 1 125 GLY 125 166 166 GLY GLY A . n A 1 126 LYS 126 167 167 LYS LYS A . n A 1 127 HIS 127 168 168 HIS HIS A . n A 1 128 VAL 128 169 169 VAL VAL A . n A 1 129 VAL 129 170 170 VAL VAL A . n A 1 130 PHE 130 171 171 PHE PHE A . n A 1 131 GLY 131 172 172 GLY GLY A . n A 1 132 HIS 132 173 173 HIS HIS A . n A 1 133 VAL 133 174 174 VAL VAL A . n A 1 134 ILE 134 175 175 ILE ILE A . n A 1 135 GLU 135 176 176 GLU GLU A . n A 1 136 GLY 136 177 177 GLY GLY A . n A 1 137 MET 137 178 178 MET MET A . n A 1 138 ASP 138 179 179 ASP ASP A . n A 1 139 VAL 139 180 180 VAL VAL A . n A 1 140 VAL 140 181 181 VAL VAL A . n A 1 141 LYS 141 182 182 LYS LYS A . n A 1 142 LYS 142 183 183 LYS LYS A . n A 1 143 ILE 143 184 184 ILE ILE A . n A 1 144 GLU 144 185 185 GLU GLU A . n A 1 145 SER 145 186 186 SER SER A . n A 1 146 PHE 146 187 187 PHE PHE A . n A 1 147 GLY 147 188 188 GLY GLY A . n A 1 148 SER 148 189 189 SER SER A . n A 1 149 LYS 149 190 190 LYS LYS A . n A 1 150 SER 150 191 191 SER SER A . n A 1 151 GLY 151 192 192 GLY GLY A . n A 1 152 ARG 152 193 193 ARG ARG A . n A 1 153 THR 153 194 194 THR THR A . n A 1 154 SER 154 195 195 SER SER A . n A 1 155 LYS 155 196 196 LYS LYS A . n A 1 156 LYS 156 197 197 LYS LYS A . n A 1 157 ILE 157 198 198 ILE ILE A . n A 1 158 VAL 158 199 199 VAL VAL A . n A 1 159 ILE 159 200 200 ILE ILE A . n A 1 160 THR 160 201 201 THR THR A . n A 1 161 ASP 161 202 202 ASP ASP A . n A 1 162 CYS 162 203 203 CYS CYS A . n A 1 163 GLY 163 204 204 GLY GLY A . n A 1 164 GLN 164 205 205 GLN GLN A . n A 1 165 LEU 165 206 206 LEU LEU A . n A 1 166 SER 166 207 207 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EA4 1 1 1 EA4 EA4 A . C 3 HOH 1 2 2 HOH HOH A . C 3 HOH 2 3 3 HOH HOH A . C 3 HOH 3 4 4 HOH HOH A . C 3 HOH 4 5 5 HOH HOH A . C 3 HOH 5 6 6 HOH HOH A . C 3 HOH 6 7 7 HOH HOH A . C 3 HOH 7 8 8 HOH HOH A . C 3 HOH 8 10 10 HOH HOH A . C 3 HOH 9 11 11 HOH HOH A . C 3 HOH 10 12 12 HOH HOH A . C 3 HOH 11 13 13 HOH HOH A . C 3 HOH 12 14 14 HOH HOH A . C 3 HOH 13 17 17 HOH HOH A . C 3 HOH 14 18 18 HOH HOH A . C 3 HOH 15 19 19 HOH HOH A . C 3 HOH 16 20 20 HOH HOH A . C 3 HOH 17 22 22 HOH HOH A . C 3 HOH 18 23 23 HOH HOH A . C 3 HOH 19 24 24 HOH HOH A . C 3 HOH 20 25 25 HOH HOH A . C 3 HOH 21 27 27 HOH HOH A . C 3 HOH 22 28 28 HOH HOH A . C 3 HOH 23 29 29 HOH HOH A . C 3 HOH 24 30 30 HOH HOH A . C 3 HOH 25 31 31 HOH HOH A . C 3 HOH 26 32 32 HOH HOH A . C 3 HOH 27 33 33 HOH HOH A . C 3 HOH 28 34 34 HOH HOH A . C 3 HOH 29 36 36 HOH HOH A . C 3 HOH 30 37 37 HOH HOH A . C 3 HOH 31 38 38 HOH HOH A . C 3 HOH 32 39 39 HOH HOH A . C 3 HOH 33 40 40 HOH HOH A . C 3 HOH 34 41 41 HOH HOH A . C 3 HOH 35 208 208 HOH HOH A . C 3 HOH 36 209 1 HOH HOH A . C 3 HOH 37 210 210 HOH HOH A . C 3 HOH 38 211 42 HOH HOH A . C 3 HOH 39 212 212 HOH HOH A . C 3 HOH 40 213 43 HOH HOH A . C 3 HOH 41 214 44 HOH HOH A . C 3 HOH 42 215 215 HOH HOH A . C 3 HOH 43 216 45 HOH HOH A . C 3 HOH 44 217 47 HOH HOH A . C 3 HOH 45 218 48 HOH HOH A . C 3 HOH 46 219 49 HOH HOH A . C 3 HOH 47 220 220 HOH HOH A . C 3 HOH 48 221 221 HOH HOH A . C 3 HOH 49 222 222 HOH HOH A . C 3 HOH 50 223 223 HOH HOH A . C 3 HOH 51 224 50 HOH HOH A . C 3 HOH 52 225 225 HOH HOH A . C 3 HOH 53 226 51 HOH HOH A . C 3 HOH 54 227 227 HOH HOH A . C 3 HOH 55 228 52 HOH HOH A . C 3 HOH 56 229 53 HOH HOH A . C 3 HOH 57 230 230 HOH HOH A . C 3 HOH 58 231 55 HOH HOH A . C 3 HOH 59 232 232 HOH HOH A . C 3 HOH 60 233 233 HOH HOH A . C 3 HOH 61 234 234 HOH HOH A . C 3 HOH 62 235 56 HOH HOH A . C 3 HOH 63 236 236 HOH HOH A . C 3 HOH 64 237 237 HOH HOH A . C 3 HOH 65 238 238 HOH HOH A . C 3 HOH 66 239 239 HOH HOH A . C 3 HOH 67 240 240 HOH HOH A . C 3 HOH 68 241 241 HOH HOH A . C 3 HOH 69 242 242 HOH HOH A . C 3 HOH 70 243 243 HOH HOH A . C 3 HOH 71 244 244 HOH HOH A . C 3 HOH 72 245 245 HOH HOH A . C 3 HOH 73 246 246 HOH HOH A . C 3 HOH 74 247 247 HOH HOH A . C 3 HOH 75 248 248 HOH HOH A . C 3 HOH 76 249 249 HOH HOH A . C 3 HOH 77 250 250 HOH HOH A . C 3 HOH 78 251 251 HOH HOH A . C 3 HOH 79 252 252 HOH HOH A . C 3 HOH 80 253 253 HOH HOH A . C 3 HOH 81 254 254 HOH HOH A . C 3 HOH 82 255 255 HOH HOH A . C 3 HOH 83 256 256 HOH HOH A . C 3 HOH 84 257 257 HOH HOH A . C 3 HOH 85 258 258 HOH HOH A . C 3 HOH 86 259 259 HOH HOH A . C 3 HOH 87 260 260 HOH HOH A . C 3 HOH 88 261 261 HOH HOH A . C 3 HOH 89 262 262 HOH HOH A . C 3 HOH 90 263 57 HOH HOH A . C 3 HOH 91 264 58 HOH HOH A . C 3 HOH 92 265 59 HOH HOH A . C 3 HOH 93 266 60 HOH HOH A . C 3 HOH 94 267 61 HOH HOH A . C 3 HOH 95 268 62 HOH HOH A . C 3 HOH 96 269 63 HOH HOH A . C 3 HOH 97 270 64 HOH HOH A . C 3 HOH 98 271 65 HOH HOH A . C 3 HOH 99 272 66 HOH HOH A . C 3 HOH 100 273 67 HOH HOH A . C 3 HOH 101 274 68 HOH HOH A . C 3 HOH 102 275 70 HOH HOH A . C 3 HOH 103 276 72 HOH HOH A . C 3 HOH 104 277 73 HOH HOH A . C 3 HOH 105 278 74 HOH HOH A . C 3 HOH 106 279 75 HOH HOH A . C 3 HOH 107 280 76 HOH HOH A . C 3 HOH 108 281 77 HOH HOH A . C 3 HOH 109 282 78 HOH HOH A . C 3 HOH 110 283 79 HOH HOH A . C 3 HOH 111 284 80 HOH HOH A . C 3 HOH 112 285 81 HOH HOH A . C 3 HOH 113 286 82 HOH HOH A . C 3 HOH 114 287 83 HOH HOH A . C 3 HOH 115 288 84 HOH HOH A . C 3 HOH 116 289 85 HOH HOH A . C 3 HOH 117 290 86 HOH HOH A . C 3 HOH 118 291 87 HOH HOH A . C 3 HOH 119 292 88 HOH HOH A . C 3 HOH 120 293 89 HOH HOH A . C 3 HOH 121 294 90 HOH HOH A . C 3 HOH 122 295 91 HOH HOH A . C 3 HOH 123 296 92 HOH HOH A . C 3 HOH 124 297 93 HOH HOH A . C 3 HOH 125 298 95 HOH HOH A . C 3 HOH 126 299 96 HOH HOH A . C 3 HOH 127 300 97 HOH HOH A . C 3 HOH 128 301 98 HOH HOH A . C 3 HOH 129 302 99 HOH HOH A . C 3 HOH 130 303 101 HOH HOH A . C 3 HOH 131 304 102 HOH HOH A . C 3 HOH 132 305 103 HOH HOH A . C 3 HOH 133 306 105 HOH HOH A . C 3 HOH 134 307 106 HOH HOH A . C 3 HOH 135 308 107 HOH HOH A . C 3 HOH 136 309 108 HOH HOH A . C 3 HOH 137 310 109 HOH HOH A . C 3 HOH 138 311 110 HOH HOH A . C 3 HOH 139 312 112 HOH HOH A . C 3 HOH 140 313 113 HOH HOH A . C 3 HOH 141 314 114 HOH HOH A . C 3 HOH 142 315 115 HOH HOH A . C 3 HOH 143 316 116 HOH HOH A . C 3 HOH 144 317 117 HOH HOH A . C 3 HOH 145 318 118 HOH HOH A . C 3 HOH 146 319 119 HOH HOH A . C 3 HOH 147 320 120 HOH HOH A . C 3 HOH 148 321 121 HOH HOH A . C 3 HOH 149 322 122 HOH HOH A . C 3 HOH 150 323 123 HOH HOH A . C 3 HOH 151 324 124 HOH HOH A . C 3 HOH 152 325 125 HOH HOH A . C 3 HOH 153 326 126 HOH HOH A . C 3 HOH 154 327 127 HOH HOH A . C 3 HOH 155 328 128 HOH HOH A . C 3 HOH 156 329 129 HOH HOH A . C 3 HOH 157 330 130 HOH HOH A . C 3 HOH 158 331 131 HOH HOH A . C 3 HOH 159 332 132 HOH HOH A . C 3 HOH 160 333 133 HOH HOH A . C 3 HOH 161 334 134 HOH HOH A . C 3 HOH 162 335 136 HOH HOH A . C 3 HOH 163 336 137 HOH HOH A . C 3 HOH 164 337 139 HOH HOH A . C 3 HOH 165 338 140 HOH HOH A . C 3 HOH 166 339 141 HOH HOH A . C 3 HOH 167 340 142 HOH HOH A . C 3 HOH 168 341 143 HOH HOH A . C 3 HOH 169 342 144 HOH HOH A . C 3 HOH 170 343 145 HOH HOH A . C 3 HOH 171 344 146 HOH HOH A . C 3 HOH 172 345 147 HOH HOH A . C 3 HOH 173 346 148 HOH HOH A . C 3 HOH 174 347 149 HOH HOH A . C 3 HOH 175 348 150 HOH HOH A . C 3 HOH 176 349 151 HOH HOH A . C 3 HOH 177 350 152 HOH HOH A . C 3 HOH 178 351 153 HOH HOH A . C 3 HOH 179 352 154 HOH HOH A . C 3 HOH 180 353 155 HOH HOH A . C 3 HOH 181 354 156 HOH HOH A . C 3 HOH 182 355 157 HOH HOH A . C 3 HOH 183 356 158 HOH HOH A . C 3 HOH 184 357 159 HOH HOH A . C 3 HOH 185 358 160 HOH HOH A . C 3 HOH 186 359 162 HOH HOH A . C 3 HOH 187 360 164 HOH HOH A . C 3 HOH 188 361 165 HOH HOH A . C 3 HOH 189 362 166 HOH HOH A . C 3 HOH 190 363 167 HOH HOH A . C 3 HOH 191 364 168 HOH HOH A . C 3 HOH 192 365 169 HOH HOH A . C 3 HOH 193 366 170 HOH HOH A . C 3 HOH 194 367 171 HOH HOH A . C 3 HOH 195 368 172 HOH HOH A . C 3 HOH 196 369 173 HOH HOH A . C 3 HOH 197 370 174 HOH HOH A . C 3 HOH 198 371 175 HOH HOH A . C 3 HOH 199 372 176 HOH HOH A . C 3 HOH 200 373 177 HOH HOH A . C 3 HOH 201 374 178 HOH HOH A . C 3 HOH 202 375 179 HOH HOH A . C 3 HOH 203 376 180 HOH HOH A . C 3 HOH 204 377 181 HOH HOH A . C 3 HOH 205 378 182 HOH HOH A . C 3 HOH 206 379 183 HOH HOH A . C 3 HOH 207 380 189 HOH HOH A . C 3 HOH 208 381 191 HOH HOH A . C 3 HOH 209 382 192 HOH HOH A . C 3 HOH 210 383 193 HOH HOH A . C 3 HOH 211 384 194 HOH HOH A . C 3 HOH 212 385 195 HOH HOH A . C 3 HOH 213 386 196 HOH HOH A . C 3 HOH 214 387 197 HOH HOH A . C 3 HOH 215 388 198 HOH HOH A . C 3 HOH 216 389 199 HOH HOH A . C 3 HOH 217 390 201 HOH HOH A . C 3 HOH 218 391 202 HOH HOH A . C 3 HOH 219 392 203 HOH HOH A . C 3 HOH 220 393 204 HOH HOH A . C 3 HOH 221 394 205 HOH HOH A . C 3 HOH 222 395 206 HOH HOH A . C 3 HOH 223 396 207 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-21 2 'Structure model' 1 1 2015-08-12 3 'Structure model' 1 2 2016-10-19 4 'Structure model' 1 3 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 X-PLOR 'model building' . ? 2 REFMAC refinement 5.4.0062 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 X-PLOR phasing . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 102 ? ? -149.19 -77.55 2 1 THR A 161 ? ? -115.45 64.24 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 57 ? CD ? A LYS 16 CD 2 1 Y 1 A LYS 57 ? CE ? A LYS 16 CE 3 1 Y 1 A LYS 57 ? NZ ? A LYS 16 NZ 4 1 Y 1 A ARG 193 ? CD ? A ARG 152 CD 5 1 Y 1 A ARG 193 ? NE ? A ARG 152 NE 6 1 Y 1 A ARG 193 ? CZ ? A ARG 152 CZ 7 1 Y 1 A ARG 193 ? NH1 ? A ARG 152 NH1 8 1 Y 1 A ARG 193 ? NH2 ? A ARG 152 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 42 ? A MET 1 2 1 Y 1 A SER 43 ? A SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EA4 C C N N 88 EA4 N N N N 89 EA4 O O N N 90 EA4 CA C N N 91 EA4 CAA C N N 92 EA4 NAB N N N 93 EA4 OAC O N N 94 EA4 CAE C Y N 95 EA4 CAF C Y N 96 EA4 CAG C Y N 97 EA4 CAH C Y N 98 EA4 CAI C N N 99 EA4 CAK C N N 100 EA4 NAM N N N 101 EA4 OAN O N N 102 EA4 CAO C N N 103 EA4 CAQ C Y N 104 EA4 CAR C Y N 105 EA4 HN H N N 106 EA4 HA H N N 107 EA4 HAA H N N 108 EA4 HAAA H N N 109 EA4 HAAB H N N 110 EA4 HAAC H N N 111 EA4 HNAB H N N 112 EA4 HNAA H N N 113 EA4 HAE H N N 114 EA4 HAF H N N 115 EA4 HAG H N N 116 EA4 HAH H N N 117 EA4 HAI H N N 118 EA4 HAIA H N N 119 EA4 HAK H N N 120 EA4 HAKA H N N 121 EA4 HNAM H N N 122 GLN N N N N 123 GLN CA C N S 124 GLN C C N N 125 GLN O O N N 126 GLN CB C N N 127 GLN CG C N N 128 GLN CD C N N 129 GLN OE1 O N N 130 GLN NE2 N N N 131 GLN OXT O N N 132 GLN H H N N 133 GLN H2 H N N 134 GLN HA H N N 135 GLN HB2 H N N 136 GLN HB3 H N N 137 GLN HG2 H N N 138 GLN HG3 H N N 139 GLN HE21 H N N 140 GLN HE22 H N N 141 GLN HXT H N N 142 GLU N N N N 143 GLU CA C N S 144 GLU C C N N 145 GLU O O N N 146 GLU CB C N N 147 GLU CG C N N 148 GLU CD C N N 149 GLU OE1 O N N 150 GLU OE2 O N N 151 GLU OXT O N N 152 GLU H H N N 153 GLU H2 H N N 154 GLU HA H N N 155 GLU HB2 H N N 156 GLU HB3 H N N 157 GLU HG2 H N N 158 GLU HG3 H N N 159 GLU HE2 H N N 160 GLU HXT H N N 161 GLY N N N N 162 GLY CA C N N 163 GLY C C N N 164 GLY O O N N 165 GLY OXT O N N 166 GLY H H N N 167 GLY H2 H N N 168 GLY HA2 H N N 169 GLY HA3 H N N 170 GLY HXT H N N 171 HIS N N N N 172 HIS CA C N S 173 HIS C C N N 174 HIS O O N N 175 HIS CB C N N 176 HIS CG C Y N 177 HIS ND1 N Y N 178 HIS CD2 C Y N 179 HIS CE1 C Y N 180 HIS NE2 N Y N 181 HIS OXT O N N 182 HIS H H N N 183 HIS H2 H N N 184 HIS HA H N N 185 HIS HB2 H N N 186 HIS HB3 H N N 187 HIS HD1 H N N 188 HIS HD2 H N N 189 HIS HE1 H N N 190 HIS HE2 H N N 191 HIS HXT H N N 192 HOH O O N N 193 HOH H1 H N N 194 HOH H2 H N N 195 ILE N N N N 196 ILE CA C N S 197 ILE C C N N 198 ILE O O N N 199 ILE CB C N S 200 ILE CG1 C N N 201 ILE CG2 C N N 202 ILE CD1 C N N 203 ILE OXT O N N 204 ILE H H N N 205 ILE H2 H N N 206 ILE HA H N N 207 ILE HB H N N 208 ILE HG12 H N N 209 ILE HG13 H N N 210 ILE HG21 H N N 211 ILE HG22 H N N 212 ILE HG23 H N N 213 ILE HD11 H N N 214 ILE HD12 H N N 215 ILE HD13 H N N 216 ILE HXT H N N 217 LEU N N N N 218 LEU CA C N S 219 LEU C C N N 220 LEU O O N N 221 LEU CB C N N 222 LEU CG C N N 223 LEU CD1 C N N 224 LEU CD2 C N N 225 LEU OXT O N N 226 LEU H H N N 227 LEU H2 H N N 228 LEU HA H N N 229 LEU HB2 H N N 230 LEU HB3 H N N 231 LEU HG H N N 232 LEU HD11 H N N 233 LEU HD12 H N N 234 LEU HD13 H N N 235 LEU HD21 H N N 236 LEU HD22 H N N 237 LEU HD23 H N N 238 LEU HXT H N N 239 LYS N N N N 240 LYS CA C N S 241 LYS C C N N 242 LYS O O N N 243 LYS CB C N N 244 LYS CG C N N 245 LYS CD C N N 246 LYS CE C N N 247 LYS NZ N N N 248 LYS OXT O N N 249 LYS H H N N 250 LYS H2 H N N 251 LYS HA H N N 252 LYS HB2 H N N 253 LYS HB3 H N N 254 LYS HG2 H N N 255 LYS HG3 H N N 256 LYS HD2 H N N 257 LYS HD3 H N N 258 LYS HE2 H N N 259 LYS HE3 H N N 260 LYS HZ1 H N N 261 LYS HZ2 H N N 262 LYS HZ3 H N N 263 LYS HXT H N N 264 MET N N N N 265 MET CA C N S 266 MET C C N N 267 MET O O N N 268 MET CB C N N 269 MET CG C N N 270 MET SD S N N 271 MET CE C N N 272 MET OXT O N N 273 MET H H N N 274 MET H2 H N N 275 MET HA H N N 276 MET HB2 H N N 277 MET HB3 H N N 278 MET HG2 H N N 279 MET HG3 H N N 280 MET HE1 H N N 281 MET HE2 H N N 282 MET HE3 H N N 283 MET HXT H N N 284 PHE N N N N 285 PHE CA C N S 286 PHE C C N N 287 PHE O O N N 288 PHE CB C N N 289 PHE CG C Y N 290 PHE CD1 C Y N 291 PHE CD2 C Y N 292 PHE CE1 C Y N 293 PHE CE2 C Y N 294 PHE CZ C Y N 295 PHE OXT O N N 296 PHE H H N N 297 PHE H2 H N N 298 PHE HA H N N 299 PHE HB2 H N N 300 PHE HB3 H N N 301 PHE HD1 H N N 302 PHE HD2 H N N 303 PHE HE1 H N N 304 PHE HE2 H N N 305 PHE HZ H N N 306 PHE HXT H N N 307 PRO N N N N 308 PRO CA C N S 309 PRO C C N N 310 PRO O O N N 311 PRO CB C N N 312 PRO CG C N N 313 PRO CD C N N 314 PRO OXT O N N 315 PRO H H N N 316 PRO HA H N N 317 PRO HB2 H N N 318 PRO HB3 H N N 319 PRO HG2 H N N 320 PRO HG3 H N N 321 PRO HD2 H N N 322 PRO HD3 H N N 323 PRO HXT H N N 324 SER N N N N 325 SER CA C N S 326 SER C C N N 327 SER O O N N 328 SER CB C N N 329 SER OG O N N 330 SER OXT O N N 331 SER H H N N 332 SER H2 H N N 333 SER HA H N N 334 SER HB2 H N N 335 SER HB3 H N N 336 SER HG H N N 337 SER HXT H N N 338 THR N N N N 339 THR CA C N S 340 THR C C N N 341 THR O O N N 342 THR CB C N R 343 THR OG1 O N N 344 THR CG2 C N N 345 THR OXT O N N 346 THR H H N N 347 THR H2 H N N 348 THR HA H N N 349 THR HB H N N 350 THR HG1 H N N 351 THR HG21 H N N 352 THR HG22 H N N 353 THR HG23 H N N 354 THR HXT H N N 355 TRP N N N N 356 TRP CA C N S 357 TRP C C N N 358 TRP O O N N 359 TRP CB C N N 360 TRP CG C Y N 361 TRP CD1 C Y N 362 TRP CD2 C Y N 363 TRP NE1 N Y N 364 TRP CE2 C Y N 365 TRP CE3 C Y N 366 TRP CZ2 C Y N 367 TRP CZ3 C Y N 368 TRP CH2 C Y N 369 TRP OXT O N N 370 TRP H H N N 371 TRP H2 H N N 372 TRP HA H N N 373 TRP HB2 H N N 374 TRP HB3 H N N 375 TRP HD1 H N N 376 TRP HE1 H N N 377 TRP HE3 H N N 378 TRP HZ2 H N N 379 TRP HZ3 H N N 380 TRP HH2 H N N 381 TRP HXT H N N 382 TYR N N N N 383 TYR CA C N S 384 TYR C C N N 385 TYR O O N N 386 TYR CB C N N 387 TYR CG C Y N 388 TYR CD1 C Y N 389 TYR CD2 C Y N 390 TYR CE1 C Y N 391 TYR CE2 C Y N 392 TYR CZ C Y N 393 TYR OH O N N 394 TYR OXT O N N 395 TYR H H N N 396 TYR H2 H N N 397 TYR HA H N N 398 TYR HB2 H N N 399 TYR HB3 H N N 400 TYR HD1 H N N 401 TYR HD2 H N N 402 TYR HE1 H N N 403 TYR HE2 H N N 404 TYR HH H N N 405 TYR HXT H N N 406 VAL N N N N 407 VAL CA C N S 408 VAL C C N N 409 VAL O O N N 410 VAL CB C N N 411 VAL CG1 C N N 412 VAL CG2 C N N 413 VAL OXT O N N 414 VAL H H N N 415 VAL H2 H N N 416 VAL HA H N N 417 VAL HB H N N 418 VAL HG11 H N N 419 VAL HG12 H N N 420 VAL HG13 H N N 421 VAL HG21 H N N 422 VAL HG22 H N N 423 VAL HG23 H N N 424 VAL HXT H N N 425 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EA4 C O doub N N 83 EA4 C CA sing N N 84 EA4 C OAN sing N N 85 EA4 N CA sing N N 86 EA4 N CAO sing N N 87 EA4 CAA CAI sing N N 88 EA4 NAB CAQ sing N N 89 EA4 OAC CAO doub N N 90 EA4 CAE CAG doub Y N 91 EA4 CAE CAQ sing Y N 92 EA4 CAF CAH sing Y N 93 EA4 CAF CAQ doub Y N 94 EA4 CAG CAR sing Y N 95 EA4 CAH CAR doub Y N 96 EA4 CAI OAN sing N N 97 EA4 CAK NAM sing N N 98 EA4 CAK CAR sing N N 99 EA4 NAM CAO sing N N 100 EA4 N HN sing N N 101 EA4 CA HA sing N N 102 EA4 CA HAA sing N N 103 EA4 CAA HAAA sing N N 104 EA4 CAA HAAB sing N N 105 EA4 CAA HAAC sing N N 106 EA4 NAB HNAB sing N N 107 EA4 NAB HNAA sing N N 108 EA4 CAE HAE sing N N 109 EA4 CAF HAF sing N N 110 EA4 CAG HAG sing N N 111 EA4 CAH HAH sing N N 112 EA4 CAI HAI sing N N 113 EA4 CAI HAIA sing N N 114 EA4 CAK HAK sing N N 115 EA4 CAK HAKA sing N N 116 EA4 NAM HNAM sing N N 117 GLN N CA sing N N 118 GLN N H sing N N 119 GLN N H2 sing N N 120 GLN CA C sing N N 121 GLN CA CB sing N N 122 GLN CA HA sing N N 123 GLN C O doub N N 124 GLN C OXT sing N N 125 GLN CB CG sing N N 126 GLN CB HB2 sing N N 127 GLN CB HB3 sing N N 128 GLN CG CD sing N N 129 GLN CG HG2 sing N N 130 GLN CG HG3 sing N N 131 GLN CD OE1 doub N N 132 GLN CD NE2 sing N N 133 GLN NE2 HE21 sing N N 134 GLN NE2 HE22 sing N N 135 GLN OXT HXT sing N N 136 GLU N CA sing N N 137 GLU N H sing N N 138 GLU N H2 sing N N 139 GLU CA C sing N N 140 GLU CA CB sing N N 141 GLU CA HA sing N N 142 GLU C O doub N N 143 GLU C OXT sing N N 144 GLU CB CG sing N N 145 GLU CB HB2 sing N N 146 GLU CB HB3 sing N N 147 GLU CG CD sing N N 148 GLU CG HG2 sing N N 149 GLU CG HG3 sing N N 150 GLU CD OE1 doub N N 151 GLU CD OE2 sing N N 152 GLU OE2 HE2 sing N N 153 GLU OXT HXT sing N N 154 GLY N CA sing N N 155 GLY N H sing N N 156 GLY N H2 sing N N 157 GLY CA C sing N N 158 GLY CA HA2 sing N N 159 GLY CA HA3 sing N N 160 GLY C O doub N N 161 GLY C OXT sing N N 162 GLY OXT HXT sing N N 163 HIS N CA sing N N 164 HIS N H sing N N 165 HIS N H2 sing N N 166 HIS CA C sing N N 167 HIS CA CB sing N N 168 HIS CA HA sing N N 169 HIS C O doub N N 170 HIS C OXT sing N N 171 HIS CB CG sing N N 172 HIS CB HB2 sing N N 173 HIS CB HB3 sing N N 174 HIS CG ND1 sing Y N 175 HIS CG CD2 doub Y N 176 HIS ND1 CE1 doub Y N 177 HIS ND1 HD1 sing N N 178 HIS CD2 NE2 sing Y N 179 HIS CD2 HD2 sing N N 180 HIS CE1 NE2 sing Y N 181 HIS CE1 HE1 sing N N 182 HIS NE2 HE2 sing N N 183 HIS OXT HXT sing N N 184 HOH O H1 sing N N 185 HOH O H2 sing N N 186 ILE N CA sing N N 187 ILE N H sing N N 188 ILE N H2 sing N N 189 ILE CA C sing N N 190 ILE CA CB sing N N 191 ILE CA HA sing N N 192 ILE C O doub N N 193 ILE C OXT sing N N 194 ILE CB CG1 sing N N 195 ILE CB CG2 sing N N 196 ILE CB HB sing N N 197 ILE CG1 CD1 sing N N 198 ILE CG1 HG12 sing N N 199 ILE CG1 HG13 sing N N 200 ILE CG2 HG21 sing N N 201 ILE CG2 HG22 sing N N 202 ILE CG2 HG23 sing N N 203 ILE CD1 HD11 sing N N 204 ILE CD1 HD12 sing N N 205 ILE CD1 HD13 sing N N 206 ILE OXT HXT sing N N 207 LEU N CA sing N N 208 LEU N H sing N N 209 LEU N H2 sing N N 210 LEU CA C sing N N 211 LEU CA CB sing N N 212 LEU CA HA sing N N 213 LEU C O doub N N 214 LEU C OXT sing N N 215 LEU CB CG sing N N 216 LEU CB HB2 sing N N 217 LEU CB HB3 sing N N 218 LEU CG CD1 sing N N 219 LEU CG CD2 sing N N 220 LEU CG HG sing N N 221 LEU CD1 HD11 sing N N 222 LEU CD1 HD12 sing N N 223 LEU CD1 HD13 sing N N 224 LEU CD2 HD21 sing N N 225 LEU CD2 HD22 sing N N 226 LEU CD2 HD23 sing N N 227 LEU OXT HXT sing N N 228 LYS N CA sing N N 229 LYS N H sing N N 230 LYS N H2 sing N N 231 LYS CA C sing N N 232 LYS CA CB sing N N 233 LYS CA HA sing N N 234 LYS C O doub N N 235 LYS C OXT sing N N 236 LYS CB CG sing N N 237 LYS CB HB2 sing N N 238 LYS CB HB3 sing N N 239 LYS CG CD sing N N 240 LYS CG HG2 sing N N 241 LYS CG HG3 sing N N 242 LYS CD CE sing N N 243 LYS CD HD2 sing N N 244 LYS CD HD3 sing N N 245 LYS CE NZ sing N N 246 LYS CE HE2 sing N N 247 LYS CE HE3 sing N N 248 LYS NZ HZ1 sing N N 249 LYS NZ HZ2 sing N N 250 LYS NZ HZ3 sing N N 251 LYS OXT HXT sing N N 252 MET N CA sing N N 253 MET N H sing N N 254 MET N H2 sing N N 255 MET CA C sing N N 256 MET CA CB sing N N 257 MET CA HA sing N N 258 MET C O doub N N 259 MET C OXT sing N N 260 MET CB CG sing N N 261 MET CB HB2 sing N N 262 MET CB HB3 sing N N 263 MET CG SD sing N N 264 MET CG HG2 sing N N 265 MET CG HG3 sing N N 266 MET SD CE sing N N 267 MET CE HE1 sing N N 268 MET CE HE2 sing N N 269 MET CE HE3 sing N N 270 MET OXT HXT sing N N 271 PHE N CA sing N N 272 PHE N H sing N N 273 PHE N H2 sing N N 274 PHE CA C sing N N 275 PHE CA CB sing N N 276 PHE CA HA sing N N 277 PHE C O doub N N 278 PHE C OXT sing N N 279 PHE CB CG sing N N 280 PHE CB HB2 sing N N 281 PHE CB HB3 sing N N 282 PHE CG CD1 doub Y N 283 PHE CG CD2 sing Y N 284 PHE CD1 CE1 sing Y N 285 PHE CD1 HD1 sing N N 286 PHE CD2 CE2 doub Y N 287 PHE CD2 HD2 sing N N 288 PHE CE1 CZ doub Y N 289 PHE CE1 HE1 sing N N 290 PHE CE2 CZ sing Y N 291 PHE CE2 HE2 sing N N 292 PHE CZ HZ sing N N 293 PHE OXT HXT sing N N 294 PRO N CA sing N N 295 PRO N CD sing N N 296 PRO N H sing N N 297 PRO CA C sing N N 298 PRO CA CB sing N N 299 PRO CA HA sing N N 300 PRO C O doub N N 301 PRO C OXT sing N N 302 PRO CB CG sing N N 303 PRO CB HB2 sing N N 304 PRO CB HB3 sing N N 305 PRO CG CD sing N N 306 PRO CG HG2 sing N N 307 PRO CG HG3 sing N N 308 PRO CD HD2 sing N N 309 PRO CD HD3 sing N N 310 PRO OXT HXT sing N N 311 SER N CA sing N N 312 SER N H sing N N 313 SER N H2 sing N N 314 SER CA C sing N N 315 SER CA CB sing N N 316 SER CA HA sing N N 317 SER C O doub N N 318 SER C OXT sing N N 319 SER CB OG sing N N 320 SER CB HB2 sing N N 321 SER CB HB3 sing N N 322 SER OG HG sing N N 323 SER OXT HXT sing N N 324 THR N CA sing N N 325 THR N H sing N N 326 THR N H2 sing N N 327 THR CA C sing N N 328 THR CA CB sing N N 329 THR CA HA sing N N 330 THR C O doub N N 331 THR C OXT sing N N 332 THR CB OG1 sing N N 333 THR CB CG2 sing N N 334 THR CB HB sing N N 335 THR OG1 HG1 sing N N 336 THR CG2 HG21 sing N N 337 THR CG2 HG22 sing N N 338 THR CG2 HG23 sing N N 339 THR OXT HXT sing N N 340 TRP N CA sing N N 341 TRP N H sing N N 342 TRP N H2 sing N N 343 TRP CA C sing N N 344 TRP CA CB sing N N 345 TRP CA HA sing N N 346 TRP C O doub N N 347 TRP C OXT sing N N 348 TRP CB CG sing N N 349 TRP CB HB2 sing N N 350 TRP CB HB3 sing N N 351 TRP CG CD1 doub Y N 352 TRP CG CD2 sing Y N 353 TRP CD1 NE1 sing Y N 354 TRP CD1 HD1 sing N N 355 TRP CD2 CE2 doub Y N 356 TRP CD2 CE3 sing Y N 357 TRP NE1 CE2 sing Y N 358 TRP NE1 HE1 sing N N 359 TRP CE2 CZ2 sing Y N 360 TRP CE3 CZ3 doub Y N 361 TRP CE3 HE3 sing N N 362 TRP CZ2 CH2 doub Y N 363 TRP CZ2 HZ2 sing N N 364 TRP CZ3 CH2 sing Y N 365 TRP CZ3 HZ3 sing N N 366 TRP CH2 HH2 sing N N 367 TRP OXT HXT sing N N 368 TYR N CA sing N N 369 TYR N H sing N N 370 TYR N H2 sing N N 371 TYR CA C sing N N 372 TYR CA CB sing N N 373 TYR CA HA sing N N 374 TYR C O doub N N 375 TYR C OXT sing N N 376 TYR CB CG sing N N 377 TYR CB HB2 sing N N 378 TYR CB HB3 sing N N 379 TYR CG CD1 doub Y N 380 TYR CG CD2 sing Y N 381 TYR CD1 CE1 sing Y N 382 TYR CD1 HD1 sing N N 383 TYR CD2 CE2 doub Y N 384 TYR CD2 HD2 sing N N 385 TYR CE1 CZ doub Y N 386 TYR CE1 HE1 sing N N 387 TYR CE2 CZ sing Y N 388 TYR CE2 HE2 sing N N 389 TYR CZ OH sing N N 390 TYR OH HH sing N N 391 TYR OXT HXT sing N N 392 VAL N CA sing N N 393 VAL N H sing N N 394 VAL N H2 sing N N 395 VAL CA C sing N N 396 VAL CA CB sing N N 397 VAL CA HA sing N N 398 VAL C O doub N N 399 VAL C OXT sing N N 400 VAL CB CG1 sing N N 401 VAL CB CG2 sing N N 402 VAL CB HB sing N N 403 VAL CG1 HG11 sing N N 404 VAL CG1 HG12 sing N N 405 VAL CG1 HG13 sing N N 406 VAL CG2 HG21 sing N N 407 VAL CG2 HG22 sing N N 408 VAL CG2 HG23 sing N N 409 VAL OXT HXT sing N N 410 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ethyl N-[(4-aminobenzyl)carbamoyl]glycinate' EA4 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2BIT _pdbx_initial_refinement_model.details 'PDB ENTRY 2BIT' #