HEADER SIGNALING PROTEIN 04-APR-11 3REG TITLE CRYSTAL STRUCTURE OF EHRHO1 BOUND TO A GTP ANALOG AND MAGNESIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO-LIKE SMALL GTPASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-191; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 5759; SOURCE 4 STRAIN: HM1:IMSS; SOURCE 5 GENE: EHRHO1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PLIC-HIS KEYWDS CYTOSKELETON, NUCLEOTIDE-BINDING, GTP-BINDING, SIGNALING PROTEIN, KEYWDS 2 LIPOPROTEIN, PRENYLATION EXPDTA X-RAY DIFFRACTION AUTHOR D.E.BOSCH,C.QIU,D.P.SIDEROVSKI REVDAT 3 13-SEP-23 3REG 1 REMARK SEQADV LINK REVDAT 2 14-MAR-12 3REG 1 JRNL REVDAT 1 28-SEP-11 3REG 0 JRNL AUTH D.E.BOSCH,E.S.WITTCHEN,C.QIU,K.BURRIDGE,D.P.SIDEROVSKI JRNL TITL UNIQUE STRUCTURAL AND NUCLEOTIDE EXCHANGE FEATURES OF THE JRNL TITL 2 RHO1 GTPASE OF ENTAMOEBA HISTOLYTICA. JRNL REF J.BIOL.CHEM. V. 286 39236 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21930699 JRNL DOI 10.1074/JBC.M111.253898 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6_289) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 81.4 REMARK 3 NUMBER OF REFLECTIONS : 23882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.9637 - 3.7454 0.97 2995 166 0.1527 0.1928 REMARK 3 2 3.7454 - 2.9735 0.96 2998 168 0.1579 0.1980 REMARK 3 3 2.9735 - 2.5978 0.95 2914 170 0.1834 0.2413 REMARK 3 4 2.5978 - 2.3603 0.92 2863 146 0.1821 0.2334 REMARK 3 5 2.3603 - 2.1912 0.87 2679 124 0.1814 0.2339 REMARK 3 6 2.1912 - 2.0620 0.80 2480 123 0.1858 0.2512 REMARK 3 7 2.0620 - 1.9588 0.73 2250 126 0.1985 0.2454 REMARK 3 8 1.9588 - 1.8735 0.62 1931 105 0.2029 0.2994 REMARK 3 9 1.8735 - 1.8010 0.50 1558 86 0.2154 0.2907 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 41.11 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.36830 REMARK 3 B22 (A**2) : -1.80010 REMARK 3 B33 (A**2) : 1.43180 REMARK 3 B12 (A**2) : 0.70300 REMARK 3 B13 (A**2) : -0.56070 REMARK 3 B23 (A**2) : 2.60310 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2775 REMARK 3 ANGLE : 1.200 3770 REMARK 3 CHIRALITY : 0.078 431 REMARK 3 PLANARITY : 0.005 465 REMARK 3 DIHEDRAL : 13.895 1004 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:23) REMARK 3 ORIGIN FOR THE GROUP (A): -1.8339 -24.3945 47.4485 REMARK 3 T TENSOR REMARK 3 T11: 0.6149 T22: 0.0741 REMARK 3 T33: 0.2797 T12: -0.0157 REMARK 3 T13: 0.2628 T23: -0.0986 REMARK 3 L TENSOR REMARK 3 L11: 4.9367 L22: 4.4703 REMARK 3 L33: 4.0311 L12: -0.5922 REMARK 3 L13: 3.5337 L23: -1.3992 REMARK 3 S TENSOR REMARK 3 S11: 0.7437 S12: 0.0655 S13: -0.2250 REMARK 3 S21: -0.2245 S22: -0.0765 S23: 0.4631 REMARK 3 S31: -0.0229 S32: -0.0377 S33: -0.5635 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 24:56) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4396 -2.9443 45.0753 REMARK 3 T TENSOR REMARK 3 T11: 0.1921 T22: 0.1738 REMARK 3 T33: 0.1627 T12: 0.0646 REMARK 3 T13: -0.0051 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.8707 L22: 0.8641 REMARK 3 L33: 2.8793 L12: -0.0434 REMARK 3 L13: -0.9119 L23: 0.3262 REMARK 3 S TENSOR REMARK 3 S11: -0.0902 S12: -0.0225 S13: 0.1827 REMARK 3 S21: 0.0403 S22: 0.0626 S23: 0.2917 REMARK 3 S31: -0.4391 S32: -0.1785 S33: -0.0049 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 57:64) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1367 -9.5921 47.7797 REMARK 3 T TENSOR REMARK 3 T11: 0.1294 T22: 0.2630 REMARK 3 T33: 0.1555 T12: -0.0120 REMARK 3 T13: 0.0537 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 5.3582 L22: 5.5469 REMARK 3 L33: 5.6838 L12: -4.5507 REMARK 3 L13: -2.7741 L23: 4.3569 REMARK 3 S TENSOR REMARK 3 S11: -0.2721 S12: -0.5693 S13: -0.4568 REMARK 3 S21: -0.0242 S22: 0.1338 S23: 0.6851 REMARK 3 S31: -0.3516 S32: -0.0911 S33: 0.1617 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 65:93) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1606 -9.7803 51.8831 REMARK 3 T TENSOR REMARK 3 T11: 0.1605 T22: 0.2474 REMARK 3 T33: 0.1038 T12: 0.0254 REMARK 3 T13: 0.0358 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.4918 L22: 0.8695 REMARK 3 L33: 0.9176 L12: -0.7286 REMARK 3 L13: -0.8939 L23: 0.3702 REMARK 3 S TENSOR REMARK 3 S11: 0.0092 S12: -0.3694 S13: -0.0973 REMARK 3 S21: 0.0473 S22: -0.1405 S23: 0.2227 REMARK 3 S31: -0.0367 S32: -0.1455 S33: 0.1169 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 94:135) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1894 -8.7170 51.7257 REMARK 3 T TENSOR REMARK 3 T11: 0.1266 T22: 0.3117 REMARK 3 T33: 0.1446 T12: 0.0138 REMARK 3 T13: -0.0305 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.9644 L22: 1.0542 REMARK 3 L33: 1.5594 L12: 0.1017 REMARK 3 L13: -0.0662 L23: 1.2097 REMARK 3 S TENSOR REMARK 3 S11: 0.0291 S12: -0.4448 S13: -0.1179 REMARK 3 S21: 0.1998 S22: 0.0642 S23: -0.2325 REMARK 3 S31: 0.1534 S32: 0.4359 S33: -0.0751 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 136:167) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0692 -7.6619 40.1067 REMARK 3 T TENSOR REMARK 3 T11: 0.1279 T22: 0.2366 REMARK 3 T33: 0.1472 T12: -0.0138 REMARK 3 T13: 0.0012 T23: -0.0501 REMARK 3 L TENSOR REMARK 3 L11: 2.8405 L22: 0.8724 REMARK 3 L33: 1.6081 L12: 0.0088 REMARK 3 L13: -1.5608 L23: -0.1248 REMARK 3 S TENSOR REMARK 3 S11: -0.0164 S12: -0.3755 S13: -0.1321 REMARK 3 S21: -0.1606 S22: 0.1253 S23: -0.1498 REMARK 3 S31: 0.0067 S32: 0.5186 S33: -0.0818 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 168:185) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3375 -13.0351 38.2427 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.1534 REMARK 3 T33: 0.1965 T12: 0.0007 REMARK 3 T13: 0.0001 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 1.5538 L22: 3.2383 REMARK 3 L33: 2.8580 L12: 1.7258 REMARK 3 L13: -1.5595 L23: -2.7621 REMARK 3 S TENSOR REMARK 3 S11: -0.1979 S12: 0.0184 S13: -0.3351 REMARK 3 S21: -0.4745 S22: 0.0289 S23: -0.4237 REMARK 3 S31: 0.3956 S32: -0.1392 S33: 0.1451 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 186:191) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6807 -27.5966 44.4662 REMARK 3 T TENSOR REMARK 3 T11: 0.4543 T22: 0.2935 REMARK 3 T33: 0.8257 T12: -0.0602 REMARK 3 T13: 0.1443 T23: -0.1039 REMARK 3 L TENSOR REMARK 3 L11: 2.6801 L22: 2.5573 REMARK 3 L33: 4.5357 L12: -2.1102 REMARK 3 L13: 0.6179 L23: 1.5072 REMARK 3 S TENSOR REMARK 3 S11: -0.5433 S12: -0.1050 S13: -2.7511 REMARK 3 S21: -0.0582 S22: 0.9596 S23: -0.5478 REMARK 3 S31: -0.4721 S32: 0.0109 S33: -0.1544 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 14:24) REMARK 3 ORIGIN FOR THE GROUP (A): 31.4624 -25.7115 16.8570 REMARK 3 T TENSOR REMARK 3 T11: 0.5712 T22: 0.2966 REMARK 3 T33: 0.3036 T12: 0.2849 REMARK 3 T13: -0.0731 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 4.5466 L22: 7.5308 REMARK 3 L33: 2.8501 L12: -0.2056 REMARK 3 L13: 3.3168 L23: 1.4262 REMARK 3 S TENSOR REMARK 3 S11: 0.7042 S12: 0.3766 S13: -0.5200 REMARK 3 S21: 0.8886 S22: -0.2659 S23: -0.0161 REMARK 3 S31: 0.7444 S32: 0.4553 S33: -0.6694 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 25:57) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5405 -4.8369 15.7781 REMARK 3 T TENSOR REMARK 3 T11: 0.1863 T22: 0.1272 REMARK 3 T33: 0.1486 T12: -0.0677 REMARK 3 T13: 0.0294 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.1571 L22: 0.3865 REMARK 3 L33: 1.9751 L12: 0.3150 REMARK 3 L13: -0.5621 L23: -0.2112 REMARK 3 S TENSOR REMARK 3 S11: 0.2372 S12: 0.1323 S13: 0.2907 REMARK 3 S21: 0.0209 S22: -0.1025 S23: -0.1721 REMARK 3 S31: -0.4582 S32: 0.4039 S33: -0.1136 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 58:75) REMARK 3 ORIGIN FOR THE GROUP (A): 31.3931 -18.9032 20.2195 REMARK 3 T TENSOR REMARK 3 T11: 0.2091 T22: 0.2996 REMARK 3 T33: 0.2656 T12: 0.0575 REMARK 3 T13: -0.0458 T23: 0.0908 REMARK 3 L TENSOR REMARK 3 L11: 2.6311 L22: 2.1834 REMARK 3 L33: 4.6209 L12: -1.9241 REMARK 3 L13: 3.0402 L23: -1.9279 REMARK 3 S TENSOR REMARK 3 S11: 0.3822 S12: 0.1563 S13: -0.6871 REMARK 3 S21: 0.1167 S22: -0.2927 S23: -0.1644 REMARK 3 S31: 0.3712 S32: 0.7509 S33: -0.0545 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 76:94) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6003 -7.9453 3.1973 REMARK 3 T TENSOR REMARK 3 T11: 0.2616 T22: 0.3814 REMARK 3 T33: 0.1052 T12: 0.1205 REMARK 3 T13: 0.0503 T23: 0.0392 REMARK 3 L TENSOR REMARK 3 L11: 1.2164 L22: 0.2573 REMARK 3 L33: 0.1965 L12: 0.5693 REMARK 3 L13: 0.1463 L23: 0.1263 REMARK 3 S TENSOR REMARK 3 S11: 0.1371 S12: 0.5832 S13: 0.1946 REMARK 3 S21: 0.0379 S22: 0.1238 S23: -0.2469 REMARK 3 S31: -0.2775 S32: 0.0885 S33: -0.2001 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 95:140) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3091 -10.6728 12.5713 REMARK 3 T TENSOR REMARK 3 T11: 0.1331 T22: 0.1376 REMARK 3 T33: 0.0984 T12: 0.0474 REMARK 3 T13: -0.0402 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 2.0143 L22: 1.0204 REMARK 3 L33: 3.5010 L12: -0.4102 REMARK 3 L13: -0.7812 L23: 0.3184 REMARK 3 S TENSOR REMARK 3 S11: 0.2490 S12: 0.3324 S13: -0.1549 REMARK 3 S21: -0.0641 S22: -0.0698 S23: 0.0026 REMARK 3 S31: -0.1213 S32: -0.3155 S33: 0.0550 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 141:154) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1762 -5.9240 23.7208 REMARK 3 T TENSOR REMARK 3 T11: 0.1902 T22: 0.3595 REMARK 3 T33: 0.2167 T12: 0.1362 REMARK 3 T13: -0.0040 T23: 0.0449 REMARK 3 L TENSOR REMARK 3 L11: 0.8318 L22: 5.2044 REMARK 3 L33: 4.9455 L12: -1.8425 REMARK 3 L13: -1.2743 L23: 1.7757 REMARK 3 S TENSOR REMARK 3 S11: 0.1452 S12: 0.1467 S13: -0.0332 REMARK 3 S21: 0.3256 S22: -0.0340 S23: 0.5142 REMARK 3 S31: -0.2448 S32: -1.3056 S33: -0.1277 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 155:174) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2568 -12.6091 21.4555 REMARK 3 T TENSOR REMARK 3 T11: 0.1303 T22: 0.0760 REMARK 3 T33: 0.1821 T12: -0.0546 REMARK 3 T13: -0.0192 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 6.3165 L22: 1.5775 REMARK 3 L33: 3.0146 L12: 2.7563 REMARK 3 L13: 2.8312 L23: 2.2867 REMARK 3 S TENSOR REMARK 3 S11: 0.3609 S12: 0.0697 S13: -0.7470 REMARK 3 S21: 0.1947 S22: 0.0292 S23: -0.1633 REMARK 3 S31: 0.2390 S32: -0.0956 S33: -0.3516 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 175:189) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8150 -20.6626 22.1978 REMARK 3 T TENSOR REMARK 3 T11: 0.1874 T22: 0.0988 REMARK 3 T33: 0.2965 T12: -0.0100 REMARK 3 T13: -0.0499 T23: 0.0486 REMARK 3 L TENSOR REMARK 3 L11: 4.1932 L22: 2.1951 REMARK 3 L33: 6.3421 L12: -2.7576 REMARK 3 L13: 0.2279 L23: 0.9027 REMARK 3 S TENSOR REMARK 3 S11: 0.0538 S12: -0.0495 S13: -0.7714 REMARK 3 S21: 0.1319 S22: 0.1159 S23: 0.9197 REMARK 3 S31: 0.7918 S32: 0.3164 S33: -0.1298 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3REG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000064829. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : CUSTOM REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23929 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.6 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 45.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.40 REMARK 200 R MERGE FOR SHELL (I) : 0.27800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ID 1A2B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: EHRHO1 AT 15 MG/ML IN CRYSTALLIZATION REMARK 280 BUFFER (50 MM TRIS PH 8.0, 250 MM NACL, 2.5% (V/V) GLYCEROL, 5 REMARK 280 MM DTT, 50 MICROM GTPGAMMAS, 1 MM MAGNESIUM CHLORIDE) WAS MIXED REMARK 280 1:1 WITH AND EQUILIBRATED AGAINST CRYSTALLIZATION SOLUTION (25% REMARK 280 PEG 4000, 150 MM AMMONIUM ACETATE, 100 MM SODIUM ACETATE PH 4.6), REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 ALA A 3 REMARK 465 PHE A 4 REMARK 465 SER A 5 REMARK 465 ASP A 6 REMARK 465 MET A 7 REMARK 465 ASN A 8 REMARK 465 THR A 9 REMARK 465 GLY A 10 REMARK 465 ALA A 11 REMARK 465 GLY A 12 REMARK 465 LYS A 13 REMARK 465 ILE A 14 REMARK 465 GLU A 15 REMARK 465 ASN A 16 REMARK 465 GLY A 17 REMARK 465 VAL A 189 REMARK 465 PRO A 190 REMARK 465 LYS A 191 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 ALA B 3 REMARK 465 PHE B 4 REMARK 465 SER B 5 REMARK 465 ASP B 6 REMARK 465 MET B 7 REMARK 465 ASN B 8 REMARK 465 THR B 9 REMARK 465 GLY B 10 REMARK 465 ALA B 11 REMARK 465 GLY B 12 REMARK 465 LYS B 13 REMARK 465 ILE B 14 REMARK 465 GLU B 15 REMARK 465 ASN B 16 REMARK 465 GLY B 17 REMARK 465 ASN B 186 REMARK 465 LYS B 187 REMARK 465 PRO B 188 REMARK 465 VAL B 189 REMARK 465 PRO B 190 REMARK 465 LYS B 191 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 53 -60.28 -94.98 REMARK 500 SER A 141 12.47 -146.08 REMARK 500 VAL B 53 -60.21 -91.31 REMARK 500 ILE B 122 65.89 -150.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 550 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 34 OG1 REMARK 620 2 THR A 52 OG1 76.5 REMARK 620 3 HOH A 201 O 89.9 91.9 REMARK 620 4 HOH A 203 O 85.5 94.4 171.1 REMARK 620 5 GSP A 538 O2G 172.6 99.3 96.4 88.8 REMARK 620 6 GSP A 538 O2B 90.4 166.9 86.8 85.6 93.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 550 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 34 OG1 REMARK 620 2 THR B 52 OG1 82.1 REMARK 620 3 HOH B 232 O 87.6 95.6 REMARK 620 4 HOH B 233 O 91.0 88.0 175.9 REMARK 620 5 GSP B 538 O2B 93.6 174.0 88.3 87.9 REMARK 620 6 GSP B 538 O2G 171.8 91.6 87.7 94.1 93.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSP A 538 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSP B 538 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 550 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3REF RELATED DB: PDB REMARK 900 EHRHO1 BOUND TO GDP AND MAGNESIUM REMARK 900 RELATED ID: 1A2B RELATED DB: PDB REMARK 900 HUMAN RHOA BOUND TO GTP-GAMMA-S DBREF 3REG A 1 191 UNP Q95TD4 Q95TD4_ENTHI 1 191 DBREF 3REG B 1 191 UNP Q95TD4 Q95TD4_ENTHI 1 191 SEQADV 3REG SER A -2 UNP Q95TD4 EXPRESSION TAG SEQADV 3REG ASN A -1 UNP Q95TD4 EXPRESSION TAG SEQADV 3REG ALA A 0 UNP Q95TD4 EXPRESSION TAG SEQADV 3REG SER B -2 UNP Q95TD4 EXPRESSION TAG SEQADV 3REG ASN B -1 UNP Q95TD4 EXPRESSION TAG SEQADV 3REG ALA B 0 UNP Q95TD4 EXPRESSION TAG SEQRES 1 A 194 SER ASN ALA MET LEU ALA PHE SER ASP MET ASN THR GLY SEQRES 2 A 194 ALA GLY LYS ILE GLU ASN GLY LYS LYS ALA LEU LYS ILE SEQRES 3 A 194 VAL VAL VAL GLY ASP GLY ALA VAL GLY LYS THR CYS LEU SEQRES 4 A 194 LEU LEU ALA PHE SER LYS GLY GLU ILE PRO THR ALA TYR SEQRES 5 A 194 VAL PRO THR VAL PHE GLU ASN PHE SER HIS VAL MET LYS SEQRES 6 A 194 TYR LYS ASN GLU GLU PHE ILE LEU HIS LEU TRP ASP THR SEQRES 7 A 194 ALA GLY GLN GLU GLU TYR ASP ARG LEU ARG PRO LEU SER SEQRES 8 A 194 TYR ALA ASP SER ASP VAL VAL LEU LEU CYS PHE ALA VAL SEQRES 9 A 194 ASN ASN ARG THR SER PHE ASP ASN ILE SER THR LYS TRP SEQRES 10 A 194 GLU PRO GLU ILE LYS HIS TYR ILE ASP THR ALA LYS THR SEQRES 11 A 194 VAL LEU VAL GLY LEU LYS VAL ASP LEU ARG LYS ASP GLY SEQRES 12 A 194 SER ASP ASP VAL THR LYS GLN GLU GLY ASP ASP LEU CYS SEQRES 13 A 194 GLN LYS LEU GLY CYS VAL ALA TYR ILE GLU ALA SER SER SEQRES 14 A 194 VAL ALA LYS ILE GLY LEU ASN GLU VAL PHE GLU LYS SER SEQRES 15 A 194 VAL ASP CYS ILE PHE SER ASN LYS PRO VAL PRO LYS SEQRES 1 B 194 SER ASN ALA MET LEU ALA PHE SER ASP MET ASN THR GLY SEQRES 2 B 194 ALA GLY LYS ILE GLU ASN GLY LYS LYS ALA LEU LYS ILE SEQRES 3 B 194 VAL VAL VAL GLY ASP GLY ALA VAL GLY LYS THR CYS LEU SEQRES 4 B 194 LEU LEU ALA PHE SER LYS GLY GLU ILE PRO THR ALA TYR SEQRES 5 B 194 VAL PRO THR VAL PHE GLU ASN PHE SER HIS VAL MET LYS SEQRES 6 B 194 TYR LYS ASN GLU GLU PHE ILE LEU HIS LEU TRP ASP THR SEQRES 7 B 194 ALA GLY GLN GLU GLU TYR ASP ARG LEU ARG PRO LEU SER SEQRES 8 B 194 TYR ALA ASP SER ASP VAL VAL LEU LEU CYS PHE ALA VAL SEQRES 9 B 194 ASN ASN ARG THR SER PHE ASP ASN ILE SER THR LYS TRP SEQRES 10 B 194 GLU PRO GLU ILE LYS HIS TYR ILE ASP THR ALA LYS THR SEQRES 11 B 194 VAL LEU VAL GLY LEU LYS VAL ASP LEU ARG LYS ASP GLY SEQRES 12 B 194 SER ASP ASP VAL THR LYS GLN GLU GLY ASP ASP LEU CYS SEQRES 13 B 194 GLN LYS LEU GLY CYS VAL ALA TYR ILE GLU ALA SER SER SEQRES 14 B 194 VAL ALA LYS ILE GLY LEU ASN GLU VAL PHE GLU LYS SER SEQRES 15 B 194 VAL ASP CYS ILE PHE SER ASN LYS PRO VAL PRO LYS HET GSP A 538 32 HET MG A 550 1 HET GSP B 538 32 HET MG B 550 1 HETNAM GSP 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 GSP 2(C10 H16 N5 O13 P3 S) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *229(H2 O) HELIX 1 1 GLY A 32 GLY A 43 1 12 HELIX 2 2 GLN A 78 ASP A 82 5 5 HELIX 3 3 LEU A 84 TYR A 89 5 6 HELIX 4 4 ASN A 103 LYS A 113 1 11 HELIX 5 5 LYS A 113 ILE A 122 1 10 HELIX 6 6 LYS A 133 ARG A 137 5 5 HELIX 7 7 THR A 145 GLY A 157 1 13 HELIX 8 8 GLY A 171 SER A 185 1 15 HELIX 9 9 GLY B 32 GLY B 43 1 12 HELIX 10 10 GLN B 78 ASP B 82 5 5 HELIX 11 11 LEU B 84 TYR B 89 5 6 HELIX 12 12 ASN B 103 LYS B 113 1 11 HELIX 13 13 LYS B 113 ASP B 123 1 11 HELIX 14 14 LYS B 133 ARG B 137 5 5 HELIX 15 15 THR B 145 GLY B 157 1 13 HELIX 16 16 GLY B 171 SER B 185 1 15 SHEET 1 A 6 PHE A 54 TYR A 63 0 SHEET 2 A 6 GLU A 66 THR A 75 -1 O ASP A 74 N GLU A 55 SHEET 3 A 6 LYS A 19 VAL A 26 1 N LEU A 21 O HIS A 71 SHEET 4 A 6 VAL A 94 ALA A 100 1 O LEU A 96 N VAL A 24 SHEET 5 A 6 LYS A 126 LEU A 132 1 O LEU A 132 N PHE A 99 SHEET 6 A 6 TYR A 161 GLU A 163 1 O ILE A 162 N LEU A 129 SHEET 1 B 6 PHE B 54 TYR B 63 0 SHEET 2 B 6 GLU B 66 THR B 75 -1 O ASP B 74 N GLU B 55 SHEET 3 B 6 ALA B 20 VAL B 26 1 N LEU B 21 O HIS B 71 SHEET 4 B 6 VAL B 94 ALA B 100 1 O LEU B 96 N VAL B 24 SHEET 5 B 6 LYS B 126 LEU B 132 1 O LEU B 132 N PHE B 99 SHEET 6 B 6 TYR B 161 GLU B 163 1 O ILE B 162 N LEU B 129 LINK OG1 THR A 34 MG MG A 550 1555 1555 2.16 LINK OG1 THR A 52 MG MG A 550 1555 1555 2.36 LINK O HOH A 201 MG MG A 550 1555 1555 2.15 LINK O HOH A 203 MG MG A 550 1555 1555 2.29 LINK O2G GSP A 538 MG MG A 550 1555 1555 2.11 LINK O2B GSP A 538 MG MG A 550 1555 1555 2.25 LINK OG1 THR B 34 MG MG B 550 1555 1555 2.12 LINK OG1 THR B 52 MG MG B 550 1555 1555 2.25 LINK O HOH B 232 MG MG B 550 1555 1555 2.37 LINK O HOH B 233 MG MG B 550 1555 1555 2.16 LINK O2B GSP B 538 MG MG B 550 1555 1555 2.18 LINK O2G GSP B 538 MG MG B 550 1555 1555 2.21 SITE 1 AC1 23 ALA A 30 VAL A 31 GLY A 32 LYS A 33 SITE 2 AC1 23 THR A 34 CYS A 35 TYR A 49 PRO A 51 SITE 3 AC1 23 THR A 52 GLY A 77 LYS A 133 ASP A 135 SITE 4 AC1 23 LEU A 136 SER A 165 SER A 166 VAL A 167 SITE 5 AC1 23 HOH A 195 HOH A 201 HOH A 203 HOH A 204 SITE 6 AC1 23 HOH A 205 HOH A 238 MG A 550 SITE 1 AC2 5 THR A 34 THR A 52 HOH A 201 HOH A 203 SITE 2 AC2 5 GSP A 538 SITE 1 AC3 26 GLY B 29 ALA B 30 VAL B 31 GLY B 32 SITE 2 AC3 26 LYS B 33 THR B 34 CYS B 35 TYR B 49 SITE 3 AC3 26 PRO B 51 THR B 52 GLY B 77 LYS B 133 SITE 4 AC3 26 ASP B 135 LEU B 136 SER B 165 SER B 166 SITE 5 AC3 26 VAL B 167 HOH B 204 HOH B 205 HOH B 232 SITE 6 AC3 26 HOH B 233 HOH B 238 HOH B 242 HOH B 277 SITE 7 AC3 26 HOH B 283 MG B 550 SITE 1 AC4 5 THR B 34 THR B 52 HOH B 232 HOH B 233 SITE 2 AC4 5 GSP B 538 CRYST1 36.468 39.497 63.578 81.75 80.76 65.44 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027421 -0.012531 -0.003402 0.00000 SCALE2 0.000000 0.027837 -0.002389 0.00000 SCALE3 0.000000 0.000000 0.015994 0.00000