HEADER HYDROLASE 05-APR-11 3RF0 TITLE CRYSTAL STRUCTURE OF EXOPOLYPHOSPHATASE FROM YERSINIA PESTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXOPOLYPHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CHYMOTRIPSIN-TREATED FRAGMENT, C-TERMINAL FRAGMENT (UNP COMPND 5 RESIUES 311-519); COMPND 6 SYNONYM: PUTATIVE EXOPOLYPHOSPHATASE; COMPND 7 EC: 3.6.1.11; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 214092; SOURCE 4 STRAIN: CO92; SOURCE 5 GENE: PPX, Y1397, YPO2837, YP_2704; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, ALPHA-BETA FOLD, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,M.ZHOU,J.HASSEMAN,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 06-DEC-23 3RF0 1 REMARK REVDAT 2 13-SEP-23 3RF0 1 REMARK LINK REVDAT 1 27-APR-11 3RF0 0 JRNL AUTH Y.KIM,M.ZHOU,J.HASSEMAN,W.F.ANDERSON,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF EXOPOLYPHOSPHATASE FROM YERSINIA PESTIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 40375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2033 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.1951 - 4.4350 0.91 2444 131 0.1866 0.2082 REMARK 3 2 4.4350 - 3.5219 0.92 2466 130 0.1534 0.1892 REMARK 3 3 3.5219 - 3.0772 0.93 2482 118 0.1608 0.2097 REMARK 3 4 3.0772 - 2.7961 0.97 2544 131 0.1757 0.2273 REMARK 3 5 2.7961 - 2.5958 0.98 2570 130 0.1693 0.2508 REMARK 3 6 2.5958 - 2.4428 0.98 2582 153 0.1711 0.2259 REMARK 3 7 2.4428 - 2.3206 0.98 2585 147 0.1723 0.2256 REMARK 3 8 2.3206 - 2.2196 0.99 2577 126 0.1696 0.2442 REMARK 3 9 2.2196 - 2.1341 0.99 2608 137 0.1756 0.2279 REMARK 3 10 2.1341 - 2.0605 0.99 2566 157 0.1721 0.2445 REMARK 3 11 2.0605 - 1.9961 0.99 2600 126 0.1898 0.2473 REMARK 3 12 1.9961 - 1.9391 0.99 2593 144 0.2027 0.2780 REMARK 3 13 1.9391 - 1.8880 0.99 2604 126 0.2073 0.2892 REMARK 3 14 1.8880 - 1.8420 0.99 2623 136 0.2373 0.2978 REMARK 3 15 1.8420 - 1.8001 0.96 2498 141 0.2651 0.3227 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 41.12 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.48320 REMARK 3 B22 (A**2) : -4.24700 REMARK 3 B33 (A**2) : -6.23620 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -6.35660 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3740 REMARK 3 ANGLE : 1.366 5113 REMARK 3 CHIRALITY : 0.106 553 REMARK 3 PLANARITY : 0.009 681 REMARK 3 DIHEDRAL : 15.007 1450 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 4:22) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2383 18.3365 2.0274 REMARK 3 T TENSOR REMARK 3 T11: 0.1851 T22: 0.1365 REMARK 3 T33: 0.1243 T12: 0.0432 REMARK 3 T13: 0.0032 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 2.1037 L22: 1.2449 REMARK 3 L33: 1.8925 L12: 0.2490 REMARK 3 L13: 1.6532 L23: 0.4424 REMARK 3 S TENSOR REMARK 3 S11: -0.0939 S12: -0.3659 S13: 0.0896 REMARK 3 S21: 0.1818 S22: -0.0096 S23: -0.0341 REMARK 3 S31: -0.2327 S32: -0.4116 S33: 0.0939 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 23:62) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8877 4.1486 10.6544 REMARK 3 T TENSOR REMARK 3 T11: 0.0532 T22: 0.0596 REMARK 3 T33: 0.0497 T12: 0.0007 REMARK 3 T13: 0.0262 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.1696 L22: 0.9607 REMARK 3 L33: 0.8790 L12: -0.3131 REMARK 3 L13: -0.2931 L23: -0.4232 REMARK 3 S TENSOR REMARK 3 S11: -0.0634 S12: -0.0073 S13: -0.0037 REMARK 3 S21: 0.1622 S22: 0.0250 S23: 0.1007 REMARK 3 S31: -0.2402 S32: -0.0938 S33: -0.0059 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 63:91) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9710 9.0295 -7.1921 REMARK 3 T TENSOR REMARK 3 T11: 0.0544 T22: 0.0906 REMARK 3 T33: 0.0578 T12: -0.0046 REMARK 3 T13: 0.0130 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.1069 L22: 0.7878 REMARK 3 L33: 0.3655 L12: 0.2652 REMARK 3 L13: 0.0957 L23: -0.1545 REMARK 3 S TENSOR REMARK 3 S11: 0.0264 S12: 0.0798 S13: -0.0035 REMARK 3 S21: 0.0936 S22: -0.0330 S23: -0.0095 REMARK 3 S31: 0.0137 S32: -0.0195 S33: -0.0041 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 92:121) REMARK 3 ORIGIN FOR THE GROUP (A): 28.9596 3.3413 -1.1877 REMARK 3 T TENSOR REMARK 3 T11: 0.0687 T22: 0.1127 REMARK 3 T33: 0.0919 T12: 0.0071 REMARK 3 T13: 0.0091 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.4749 L22: 1.1913 REMARK 3 L33: 0.3332 L12: 0.3567 REMARK 3 L13: 0.6065 L23: 0.1499 REMARK 3 S TENSOR REMARK 3 S11: -0.2315 S12: 0.3919 S13: -0.1515 REMARK 3 S21: -0.0965 S22: 0.1376 S23: -0.2427 REMARK 3 S31: -0.0073 S32: 0.1976 S33: 0.0114 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 122:138) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6256 -2.1415 5.5719 REMARK 3 T TENSOR REMARK 3 T11: 0.0926 T22: 0.0566 REMARK 3 T33: 0.0843 T12: 0.0002 REMARK 3 T13: -0.0035 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.3666 L22: 0.4645 REMARK 3 L33: 0.9548 L12: 0.0844 REMARK 3 L13: 0.3179 L23: -0.1313 REMARK 3 S TENSOR REMARK 3 S11: -0.0375 S12: 0.0745 S13: 0.0971 REMARK 3 S21: 0.0733 S22: -0.0099 S23: -0.0437 REMARK 3 S31: -0.0135 S32: 0.1212 S33: 0.0282 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 139:150) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9701 -3.9031 5.9174 REMARK 3 T TENSOR REMARK 3 T11: 0.0812 T22: 0.1513 REMARK 3 T33: 0.1803 T12: -0.0068 REMARK 3 T13: 0.0166 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 0.3464 L22: 0.1846 REMARK 3 L33: 0.9488 L12: 0.2681 REMARK 3 L13: 0.0184 L23: -0.0971 REMARK 3 S TENSOR REMARK 3 S11: -0.0187 S12: 0.0590 S13: 0.1078 REMARK 3 S21: -0.0091 S22: -0.0045 S23: 0.1859 REMARK 3 S31: 0.1846 S32: -0.2161 S33: -0.0380 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 151:164) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3776 -11.1718 12.9887 REMARK 3 T TENSOR REMARK 3 T11: 0.1354 T22: 0.1174 REMARK 3 T33: 0.1025 T12: -0.0068 REMARK 3 T13: 0.0010 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 0.4781 L22: 0.0173 REMARK 3 L33: 0.4024 L12: 0.0869 REMARK 3 L13: 0.2134 L23: -0.0166 REMARK 3 S TENSOR REMARK 3 S11: -0.0162 S12: -0.1306 S13: -0.1163 REMARK 3 S21: -0.0311 S22: 0.0086 S23: 0.0407 REMARK 3 S31: 0.2057 S32: 0.0434 S33: -0.0215 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 165:188) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4663 -14.0744 2.2813 REMARK 3 T TENSOR REMARK 3 T11: 0.1672 T22: 0.0061 REMARK 3 T33: 0.0679 T12: -0.1033 REMARK 3 T13: -0.0571 T23: -0.0343 REMARK 3 L TENSOR REMARK 3 L11: 0.3730 L22: 0.1057 REMARK 3 L33: 0.5510 L12: 0.0774 REMARK 3 L13: 0.1855 L23: -0.0882 REMARK 3 S TENSOR REMARK 3 S11: 0.2660 S12: -0.0083 S13: -0.0199 REMARK 3 S21: -0.2019 S22: -0.1609 S23: -0.0559 REMARK 3 S31: 0.5488 S32: 0.2282 S33: -0.0129 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 189:202) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9587 -15.9405 10.2886 REMARK 3 T TENSOR REMARK 3 T11: 0.1278 T22: -0.1928 REMARK 3 T33: 0.1170 T12: 0.0494 REMARK 3 T13: 0.0013 T23: -0.0744 REMARK 3 L TENSOR REMARK 3 L11: 0.3773 L22: 0.5991 REMARK 3 L33: 0.5331 L12: 0.0142 REMARK 3 L13: 0.4308 L23: 0.2792 REMARK 3 S TENSOR REMARK 3 S11: 0.0687 S12: 0.3966 S13: -0.1960 REMARK 3 S21: 0.7510 S22: -0.1913 S23: -0.0372 REMARK 3 S31: 0.1994 S32: 0.3160 S33: 0.0021 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 3:22) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8169 -21.4811 -27.1940 REMARK 3 T TENSOR REMARK 3 T11: 0.1523 T22: 0.0292 REMARK 3 T33: 0.2005 T12: -0.0196 REMARK 3 T13: -0.0929 T23: -0.0400 REMARK 3 L TENSOR REMARK 3 L11: 0.7465 L22: 2.5333 REMARK 3 L33: 1.2318 L12: -0.9753 REMARK 3 L13: 0.6039 L23: -1.5347 REMARK 3 S TENSOR REMARK 3 S11: -0.1907 S12: 0.2008 S13: 0.1756 REMARK 3 S21: 0.5459 S22: 0.1213 S23: -0.8317 REMARK 3 S31: -0.1834 S32: -0.1405 S33: 0.1037 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 23:62) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0063 -15.4874 -16.5763 REMARK 3 T TENSOR REMARK 3 T11: 0.0901 T22: 0.0877 REMARK 3 T33: 0.0868 T12: -0.0020 REMARK 3 T13: -0.0194 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.4231 L22: 0.6267 REMARK 3 L33: 0.5176 L12: -0.2556 REMARK 3 L13: 0.0592 L23: 0.5484 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: -0.0784 S13: 0.0424 REMARK 3 S21: 0.0716 S22: 0.0467 S23: -0.0991 REMARK 3 S31: 0.0726 S32: 0.0090 S33: -0.0254 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 63:103) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1061 -22.7610 -32.1372 REMARK 3 T TENSOR REMARK 3 T11: 0.0626 T22: 0.0549 REMARK 3 T33: 0.0642 T12: 0.0087 REMARK 3 T13: -0.0003 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.3120 L22: 0.4279 REMARK 3 L33: 0.7837 L12: -0.0652 REMARK 3 L13: 0.1148 L23: 0.2616 REMARK 3 S TENSOR REMARK 3 S11: -0.0634 S12: 0.0386 S13: 0.0183 REMARK 3 S21: -0.0396 S22: -0.0355 S23: -0.0826 REMARK 3 S31: -0.0370 S32: 0.0070 S33: 0.0467 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 104:121) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1451 -26.6205 -24.1196 REMARK 3 T TENSOR REMARK 3 T11: 0.1787 T22: 0.0555 REMARK 3 T33: 0.1147 T12: -0.0087 REMARK 3 T13: -0.0314 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 0.8464 L22: 0.0033 REMARK 3 L33: 1.0181 L12: -0.1144 REMARK 3 L13: 0.0134 L23: -0.0526 REMARK 3 S TENSOR REMARK 3 S11: 0.1176 S12: 0.1207 S13: -0.2110 REMARK 3 S21: -0.1366 S22: -0.0780 S23: 0.0976 REMARK 3 S31: 0.3942 S32: 0.0756 S33: -0.0224 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 122:172) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8337 -8.4856 -17.5906 REMARK 3 T TENSOR REMARK 3 T11: 0.0727 T22: 0.0418 REMARK 3 T33: 0.0446 T12: -0.0024 REMARK 3 T13: 0.0087 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.7429 L22: 0.2766 REMARK 3 L33: 1.5228 L12: -0.1817 REMARK 3 L13: -0.0159 L23: -0.4766 REMARK 3 S TENSOR REMARK 3 S11: -0.0161 S12: -0.0563 S13: 0.0110 REMARK 3 S21: 0.2042 S22: -0.0185 S23: -0.0718 REMARK 3 S31: -0.2978 S32: -0.1096 S33: 0.0118 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 173:200) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1007 -8.2405 -20.4206 REMARK 3 T TENSOR REMARK 3 T11: 0.0713 T22: 0.1269 REMARK 3 T33: 0.0902 T12: 0.0180 REMARK 3 T13: 0.0184 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.5925 L22: 0.5365 REMARK 3 L33: 1.7674 L12: -0.3820 REMARK 3 L13: -0.2265 L23: -0.4464 REMARK 3 S TENSOR REMARK 3 S11: -0.1517 S12: 0.0650 S13: -0.0723 REMARK 3 S21: 0.0831 S22: 0.0824 S23: 0.1671 REMARK 3 S31: -0.2108 S32: -0.4714 S33: 0.0012 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RF0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000064848. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97942 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41471 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10100 REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.39800 REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: PDBID 1U6Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM NITRATE, 0.1 M BIS-TRIS REMARK 280 -PROPANE PH 7.5, 20 % (V/V) PEG3350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.54150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 3 REMARK 465 GLU A 203 REMARK 465 ALA A 204 REMARK 465 ALA A 205 REMARK 465 LYS A 206 REMARK 465 VAL A 207 REMARK 465 ALA A 208 REMARK 465 PRO A 209 REMARK 465 GLU A 210 REMARK 465 GLU A 211 REMARK 465 PRO B 201 REMARK 465 ASP B 202 REMARK 465 GLU B 203 REMARK 465 ALA B 204 REMARK 465 ALA B 205 REMARK 465 LYS B 206 REMARK 465 VAL B 207 REMARK 465 ALA B 208 REMARK 465 PRO B 209 REMARK 465 GLU B 210 REMARK 465 GLU B 211 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 107 -149.05 57.95 REMARK 500 ARG A 142 -130.86 55.92 REMARK 500 ASP A 157 -128.53 48.39 REMARK 500 ASP A 157 -126.58 45.35 REMARK 500 LYS B 107 -145.04 54.73 REMARK 500 ARG B 142 -129.15 59.34 REMARK 500 ASP B 157 -130.61 45.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN A 44 -10.60 REMARK 500 ASN B 44 -13.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 212 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U6Z RELATED DB: PDB REMARK 900 USED AS THE STARTING MODEL FOR MOLECULAR REPLACEMENT REMARK 900 RELATED ID: IDP02550 RELATED DB: TARGETDB DBREF 3RF0 A 3 211 UNP Q7CJK2 Q7CJK2_YERPE 311 519 DBREF 3RF0 B 3 211 UNP Q7CJK2 Q7CJK2_YERPE 311 519 SEQRES 1 A 209 ARG HIS GLN ASP ILE ARG GLN ARG THR ALA LYS SER LEU SEQRES 2 A 209 ALA ASP HIS TYR ASN ILE ASP ARG GLU GLN ALA ARG ARG SEQRES 3 A 209 VAL LEU GLU THR THR GLU GLN LEU TYR THR GLN TRP LEU SEQRES 4 A 209 ALA GLN ASN THR LYS LEU VAL GLN PRO GLN LEU GLU ALA SEQRES 5 A 209 LEU LEU LYS TRP ALA ALA MSE LEU HIS GLU VAL GLY LEU SEQRES 6 A 209 SER ILE ASN HIS SER GLY MSE HIS ARG HIS SER ALA TYR SEQRES 7 A 209 ILE LEU GLN ASN THR ASN LEU PRO GLY PHE ASN GLN GLU SEQRES 8 A 209 GLN GLN THR LEU LEU ALA THR LEU VAL ARG MSE HIS ARG SEQRES 9 A 209 LYS ALA ILE LYS LEU ASP GLU LEU PRO ARG LEU ASN LEU SEQRES 10 A 209 PHE LYS LYS LYS TYR TYR LEU PRO LEU ILE GLN LEU LEU SEQRES 11 A 209 ARG LEU SER THR LEU LEU ASN ASN GLN ARG GLN SER THR SEQRES 12 A 209 THR THR PRO GLU SER LEU ARG LEU ILE THR ASP ASP SER SEQRES 13 A 209 HIS TRP THR LEU ARG PHE PRO HIS GLY TYR LEU THR GLN SEQRES 14 A 209 ASN SER LEU VAL GLN LEU ASP PHE GLU ARG GLU GLN ALA SEQRES 15 A 209 TYR TRP ASP ASP VAL VAL GLY TRP LYS LEU VAL ILE GLU SEQRES 16 A 209 GLU GLU GLU PRO ASP GLU ALA ALA LYS VAL ALA PRO GLU SEQRES 17 A 209 GLU SEQRES 1 B 209 ARG HIS GLN ASP ILE ARG GLN ARG THR ALA LYS SER LEU SEQRES 2 B 209 ALA ASP HIS TYR ASN ILE ASP ARG GLU GLN ALA ARG ARG SEQRES 3 B 209 VAL LEU GLU THR THR GLU GLN LEU TYR THR GLN TRP LEU SEQRES 4 B 209 ALA GLN ASN THR LYS LEU VAL GLN PRO GLN LEU GLU ALA SEQRES 5 B 209 LEU LEU LYS TRP ALA ALA MSE LEU HIS GLU VAL GLY LEU SEQRES 6 B 209 SER ILE ASN HIS SER GLY MSE HIS ARG HIS SER ALA TYR SEQRES 7 B 209 ILE LEU GLN ASN THR ASN LEU PRO GLY PHE ASN GLN GLU SEQRES 8 B 209 GLN GLN THR LEU LEU ALA THR LEU VAL ARG MSE HIS ARG SEQRES 9 B 209 LYS ALA ILE LYS LEU ASP GLU LEU PRO ARG LEU ASN LEU SEQRES 10 B 209 PHE LYS LYS LYS TYR TYR LEU PRO LEU ILE GLN LEU LEU SEQRES 11 B 209 ARG LEU SER THR LEU LEU ASN ASN GLN ARG GLN SER THR SEQRES 12 B 209 THR THR PRO GLU SER LEU ARG LEU ILE THR ASP ASP SER SEQRES 13 B 209 HIS TRP THR LEU ARG PHE PRO HIS GLY TYR LEU THR GLN SEQRES 14 B 209 ASN SER LEU VAL GLN LEU ASP PHE GLU ARG GLU GLN ALA SEQRES 15 B 209 TYR TRP ASP ASP VAL VAL GLY TRP LYS LEU VAL ILE GLU SEQRES 16 B 209 GLU GLU GLU PRO ASP GLU ALA ALA LYS VAL ALA PRO GLU SEQRES 17 B 209 GLU MODRES 3RF0 MSE A 61 MET SELENOMETHIONINE MODRES 3RF0 MSE A 74 MET SELENOMETHIONINE MODRES 3RF0 MSE A 104 MET SELENOMETHIONINE MODRES 3RF0 MSE B 61 MET SELENOMETHIONINE MODRES 3RF0 MSE B 74 MET SELENOMETHIONINE MODRES 3RF0 MSE B 104 MET SELENOMETHIONINE HET MSE A 61 8 HET MSE A 74 8 HET MSE A 104 16 HET MSE B 61 8 HET MSE B 74 16 HET MSE B 104 16 HET NO3 A 212 4 HET FMT A 213 3 HET NO3 B 212 4 HETNAM MSE SELENOMETHIONINE HETNAM NO3 NITRATE ION HETNAM FMT FORMIC ACID FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 NO3 2(N O3 1-) FORMUL 4 FMT C H2 O2 FORMUL 6 HOH *466(H2 O) HELIX 1 1 HIS A 4 ASN A 20 1 17 HELIX 2 2 ASP A 22 ASN A 44 1 23 HELIX 3 3 THR A 45 VAL A 48 5 4 HELIX 4 4 GLN A 49 HIS A 63 1 15 HELIX 5 5 GLU A 64 ILE A 69 5 6 HELIX 6 6 GLY A 73 THR A 85 1 13 HELIX 7 7 ASN A 91 MSE A 104 1 14 HELIX 8 8 LYS A 110 LEU A 114 5 5 HELIX 9 9 LYS A 121 ASN A 139 1 19 HELIX 10 10 GLN A 141 THR A 145 5 5 HELIX 11 11 GLY A 167 ASN A 172 1 6 HELIX 12 12 ASN A 172 ASP A 187 1 16 HELIX 13 13 ARG B 3 ASN B 20 1 18 HELIX 14 14 ASP B 22 ASN B 44 1 23 HELIX 15 15 THR B 45 VAL B 48 5 4 HELIX 16 16 GLN B 49 HIS B 63 1 15 HELIX 17 17 GLU B 64 ILE B 69 5 6 HELIX 18 18 GLY B 73 THR B 85 1 13 HELIX 19 19 ASN B 91 MSE B 104 1 14 HELIX 20 20 LYS B 110 LEU B 114 5 5 HELIX 21 21 LYS B 121 ASN B 139 1 19 HELIX 22 22 ASN B 140 THR B 145 5 6 HELIX 23 23 GLY B 167 ASN B 172 1 6 HELIX 24 24 ASN B 172 ASP B 188 1 17 SHEET 1 A 3 ARG A 152 ASP A 156 0 SHEET 2 A 3 HIS A 159 PHE A 164 -1 O THR A 161 N ILE A 154 SHEET 3 A 3 LYS A 193 GLU A 198 1 O LYS A 193 N TRP A 160 SHEET 1 B 3 ARG B 152 ASP B 156 0 SHEET 2 B 3 HIS B 159 PHE B 164 -1 O ARG B 163 N ARG B 152 SHEET 3 B 3 LYS B 193 GLU B 198 1 O GLU B 197 N PHE B 164 LINK C ALA A 60 N MSE A 61 1555 1555 1.34 LINK C MSE A 61 N LEU A 62 1555 1555 1.33 LINK C GLY A 73 N MSE A 74 1555 1555 1.33 LINK C MSE A 74 N HIS A 75 1555 1555 1.34 LINK C ARG A 103 N AMSE A 104 1555 1555 1.32 LINK C ARG A 103 N BMSE A 104 1555 1555 1.33 LINK C AMSE A 104 N HIS A 105 1555 1555 1.33 LINK C BMSE A 104 N HIS A 105 1555 1555 1.33 LINK C ALA B 60 N MSE B 61 1555 1555 1.32 LINK C MSE B 61 N LEU B 62 1555 1555 1.33 LINK C GLY B 73 N AMSE B 74 1555 1555 1.34 LINK C GLY B 73 N BMSE B 74 1555 1555 1.33 LINK C AMSE B 74 N HIS B 75 1555 1555 1.34 LINK C BMSE B 74 N HIS B 75 1555 1555 1.33 LINK C ARG B 103 N AMSE B 104 1555 1555 1.33 LINK C ARG B 103 N BMSE B 104 1555 1555 1.33 LINK C AMSE B 104 N HIS B 105 1555 1555 1.33 LINK C BMSE B 104 N HIS B 105 1555 1555 1.33 SITE 1 AC1 6 GLN A 49 LEU A 52 LEU A 119 PHE A 120 SITE 2 AC1 6 LYS A 121 TYR A 124 SITE 1 AC2 7 GLN A 141 ASN A 172 SER A 173 LEU A 174 SITE 2 AC2 7 VAL A 175 HOH A 272 HOH A 454 SITE 1 AC3 6 GLN B 49 LEU B 52 LEU B 119 PHE B 120 SITE 2 AC3 6 LYS B 121 TYR B 124 CRYST1 60.412 71.083 60.195 90.00 118.29 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016553 0.000000 0.008910 0.00000 SCALE2 0.000000 0.014068 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018866 0.00000