HEADER ISOMERASE 08-APR-11 3RGA TITLE CRYSTAL STRUCTURE OF EPOXIDE HYDROLASE FOR POLYETHER LASALOCID A TITLE 2 BIOSYNTHESIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPOXIDE HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.3.2.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES LASALIENSIS; SOURCE 3 ORGANISM_TAXID: 324833; SOURCE 4 GENE: LASB, LSD19; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCOLD1 KEYWDS NTF2-LIKE, EPOXIDE-OPENING CYCLIC ETHER FORMATION, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.HOTTA,I.I.MATHEWS,X.CHEN,C.-Y.KIM REVDAT 3 01-NOV-23 3RGA 1 REMARK SEQADV LINK REVDAT 2 28-MAR-12 3RGA 1 JRNL REVDAT 1 07-MAR-12 3RGA 0 JRNL AUTH K.HOTTA,X.CHEN,R.S.PATON,A.MINAMI,H.LI,K.SWAMINATHAN, JRNL AUTH 2 I.I.MATHEWS,K.WATANABE,H.OIKAWA,K.N.HOUK,C.-Y.KIM JRNL TITL ENZYMATIC CATALYSIS OF ANTI-BALDWIN RING CLOSURE IN JRNL TITL 2 POLYETHER BIOSYNTHESIS JRNL REF NATURE V. 483 355 2012 JRNL REFN ISSN 0028-0836 JRNL PMID 22388816 JRNL DOI 10.1038/NATURE10865 REMARK 2 REMARK 2 RESOLUTION. 1.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 37291 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1966 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.63 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2616 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE SET COUNT : 132 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2126 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 94 REMARK 3 SOLVENT ATOMS : 163 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.52000 REMARK 3 B22 (A**2) : 0.32000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.084 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.080 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.230 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2330 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1608 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3183 ; 1.781 ; 2.015 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3858 ; 0.976 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 300 ; 6.169 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;25.115 ;21.735 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 361 ;12.325 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;12.621 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 365 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2591 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 472 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 280 REMARK 3 ORIGIN FOR THE GROUP (A): 41.6734 43.8500 7.6840 REMARK 3 T TENSOR REMARK 3 T11: 0.0118 T22: 0.0185 REMARK 3 T33: 0.0087 T12: -0.0008 REMARK 3 T13: 0.0071 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.1246 L22: 0.8302 REMARK 3 L33: 1.3759 L12: 0.1322 REMARK 3 L13: 0.2455 L23: 0.1391 REMARK 3 S TENSOR REMARK 3 S11: 0.0278 S12: -0.0933 S13: 0.0308 REMARK 3 S21: 0.0256 S22: 0.0002 S23: -0.0359 REMARK 3 S31: 0.0090 S32: 0.0980 S33: -0.0280 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3RGA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000064894. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39256 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.590 REMARK 200 RESOLUTION RANGE LOW (A) : 29.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09400 REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.94100 REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLREP REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB CODE 1E3V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 1.6M SODIUM REMARK 280 FORMATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.92500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.74000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.92500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.74000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 428 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 281 REMARK 465 ALA A 282 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 265 NH1 ARG A 267 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 210 CG HIS A 210 CD2 0.060 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 139 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 149 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP A 258 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 72 -157.47 -99.68 REMARK 500 THR A 77 -34.62 -136.33 REMARK 500 TRP A 121 142.97 -172.55 REMARK 500 ALA A 133 77.79 -151.42 REMARK 500 SER A 174 -96.15 -108.64 REMARK 500 GLN A 206 31.59 -93.54 REMARK 500 ARG A 209 -46.79 -136.46 REMARK 500 ARG A 209 -48.01 -135.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 LSB A 301 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 312 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 123 O REMARK 620 2 SER A 126 O 90.5 REMARK 620 3 THR A 129 O 130.3 91.3 REMARK 620 4 HOH A 447 O 90.0 177.8 86.7 REMARK 620 5 HOH A 452 O 107.2 88.9 122.5 93.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LSB A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ILD A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 312 DBREF 3RGA A 1 282 UNP B5M9L7 B5M9L7_STRLS 1 282 SEQADV 3RGA HIS A 0 UNP B5M9L7 EXPRESSION TAG SEQRES 1 A 283 HIS MET PRO ALA GLU THR VAL ARG LYS GLU VAL ALA LEU SEQRES 2 A 283 GLU TYR CYS ARG ARG VAL ASN ALA GLY GLU LEU GLU GLY SEQRES 3 A 283 VAL LEU GLN LEU PHE ALA PRO ASP ALA ARG LEU VAL ASP SEQRES 4 A 283 PRO LEU GLY THR GLU PRO VAL VAL GLY ARG ALA ALA LEU SEQRES 5 A 283 ALA ALA ARG LEU ALA PRO ALA LEU ARG GLY ALA VAL HIS SEQRES 6 A 283 GLU GLU PRO GLY ARG PRO TYR ALA ALA HIS ASP GLY THR SEQRES 7 A 283 SER VAL VAL LEU PRO ALA THR VAL THR VAL GLY ALA PRO SEQRES 8 A 283 GLY ALA PRO PRO GLN ARG ARG GLY ARG THR ARG VAL MET SEQRES 9 A 283 GLY VAL ILE GLU VAL GLY GLU ASP GLY LEU ILE ARG GLU SEQRES 10 A 283 MET ARG VAL MET TRP GLY VAL THR ASP SER SER TRP THR SEQRES 11 A 283 ALA ARG PRO ALA PRO ASP GLU GLU ARG ARG LYS GLU LEU SEQRES 12 A 283 ALA ARG GLU HIS CYS LEU ARG ILE ASN ASP GLY ASP VAL SEQRES 13 A 283 ASP GLY LEU LEU LYS LEU TYR SER PRO ARG ILE ARG PHE SEQRES 14 A 283 GLU ASP PRO VAL GLY SER TRP THR ARG THR GLY LEU GLU SEQRES 15 A 283 ALA LEU ARG ALA HIS ALA THR MET ALA VAL GLY SER ASN SEQRES 16 A 283 VAL ARG GLU THR ALA GLY LEU THR VAL ALA GLY GLN ASP SEQRES 17 A 283 GLY ARG HIS ALA ALA VAL THR VAL SER ALA THR MET ASP SEQRES 18 A 283 TYR LEU PRO SER GLY PRO LEU LEU ALA ARG HIS HIS LEU SEQRES 19 A 283 MET THR LEU PRO ALA PRO ALA ASP PRO HIS ARG ALA LEU SEQRES 20 A 283 ILE GLY ILE GLU TYR VAL MET VAL ILE GLY VAL ASP ALA SEQRES 21 A 283 ASP GLY LEU ILE ASP GLU MET ARG ALA TYR TRP GLY ALA SEQRES 22 A 283 THR ASP VAL SER LEU LEU ASP PRO ALA ALA HET LSB A 301 24 HET ILD A 302 36 HET GOL A 303 6 HET GOL A 304 6 HET ACT A 305 4 HET ACT A 306 4 HET MOH A 307 2 HET MOH A 308 2 HET FMT A 309 3 HET FMT A 310 3 HET FMT A 311 6 HET NA A 312 1 HETNAM LSB (4R,5S)-3-[(2R,3S,4S)-2-ETHYL-5-[(3R)-2-ETHYL-3-[2- HETNAM 2 LSB [(2R,3R)-2-ETHYL-3-METHYL-OXIRAN-2-YL]ETHYL]OXIRAN-2- HETNAM 3 LSB YL]-3-HYDROXY-4-METHYL-PENTANOYL]-4-METHYL-5-PHENYL-1, HETNAM 4 LSB 3-OXAZOLIDIN-2-ONE HETNAM ILD (4R,5S)-3-[(2R)-2-{(2S,2'R,4S,5S,5'R)-2,5'-DIETHYL-5'- HETNAM 2 ILD [(1S)-1-HYDROXYETHYL]-4-METHYLOCTAHYDRO-2,2'-BIFURAN- HETNAM 3 ILD 5-YL}BUTANOYL]-4-METHYL-5-PHENYL-1,3-OXAZOLIDIN-2-ONE HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETNAM MOH METHANOL HETNAM FMT FORMIC ACID HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 LSB C29 H43 N O6 FORMUL 3 ILD C29 H43 N O6 FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 ACT 2(C2 H3 O2 1-) FORMUL 8 MOH 2(C H4 O) FORMUL 10 FMT 3(C H2 O2) FORMUL 13 NA NA 1+ FORMUL 14 HOH *163(H2 O) HELIX 1 1 ALA A 3 GLY A 21 1 19 HELIX 2 2 GLU A 22 LEU A 29 1 8 HELIX 3 3 GLY A 47 GLY A 61 1 15 HELIX 4 4 PRO A 93 ARG A 97 5 5 HELIX 5 5 GLY A 122 SER A 126 5 5 HELIX 6 6 ALA A 133 ASP A 152 1 20 HELIX 7 7 ASP A 154 LYS A 160 1 7 HELIX 8 8 GLY A 179 SER A 193 1 15 HELIX 9 9 PRO A 223 HIS A 231 1 9 HELIX 10 10 GLY A 271 THR A 273 5 3 SHEET 1 A 6 VAL A 45 VAL A 46 0 SHEET 2 A 6 PHE A 30 VAL A 37 -1 N LEU A 36 O VAL A 45 SHEET 3 A 6 ILE A 114 MET A 120 1 O MET A 117 N VAL A 37 SHEET 4 A 6 GLY A 98 VAL A 108 -1 N GLU A 107 O ARG A 115 SHEET 5 A 6 SER A 78 VAL A 87 -1 N VAL A 79 O ILE A 106 SHEET 6 A 6 HIS A 64 PRO A 67 -1 N GLU A 66 O THR A 84 SHEET 1 B 6 THR A 176 THR A 178 0 SHEET 2 B 6 TYR A 162 GLU A 169 -1 N PHE A 168 O ARG A 177 SHEET 3 B 6 ILE A 263 TYR A 269 1 O ILE A 263 N SER A 163 SHEET 4 B 6 LEU A 246 VAL A 257 -1 N VAL A 252 O TYR A 269 SHEET 5 B 6 HIS A 210 ASP A 220 -1 N VAL A 215 O TYR A 251 SHEET 6 B 6 ARG A 196 ALA A 204 -1 N GLY A 200 O THR A 214 SHEET 1 C 5 THR A 176 THR A 178 0 SHEET 2 C 5 TYR A 162 GLU A 169 -1 N PHE A 168 O ARG A 177 SHEET 3 C 5 ILE A 263 TYR A 269 1 O ILE A 263 N SER A 163 SHEET 4 C 5 LEU A 246 VAL A 257 -1 N VAL A 252 O TYR A 269 SHEET 5 C 5 VAL A 275 LEU A 278 -1 O SER A 276 N GLY A 248 LINK O VAL A 123 NA NA A 312 1555 1555 2.29 LINK O SER A 126 NA NA A 312 1555 1555 2.32 LINK O THR A 129 NA NA A 312 1555 1555 2.11 LINK NA NA A 312 O HOH A 447 1555 1555 2.42 LINK NA NA A 312 O HOH A 452 1555 1555 2.44 CISPEP 1 ASP A 38 PRO A 39 0 -7.26 CISPEP 2 ASP A 170 PRO A 171 0 -8.47 CISPEP 3 LEU A 222 PRO A 223 0 7.47 CISPEP 4 ASP A 279 PRO A 280 0 -0.79 SITE 1 AC1 15 TYR A 14 CYS A 15 ASP A 38 LEU A 55 SITE 2 AC1 15 GLU A 65 LEU A 81 VAL A 85 VAL A 87 SITE 3 AC1 15 THR A 100 VAL A 102 GLY A 104 ILE A 106 SITE 4 AC1 15 VAL A 119 TRP A 121 HOH A 435 SITE 1 AC2 14 ASP A 170 TRP A 175 ARG A 177 HIS A 186 SITE 2 AC2 14 MET A 189 ALA A 190 GLU A 197 LEU A 228 SITE 3 AC2 14 HIS A 231 ILE A 249 TYR A 251 TRP A 270 SITE 4 AC2 14 FMT A 310 FMT A 311 SITE 1 AC3 5 ARG A 167 GLU A 169 THR A 176 GLU A 265 SITE 2 AC3 5 ARG A 267 SITE 1 AC4 7 PRO A 39 ARG A 131 GLU A 136 GLN A 206 SITE 2 AC4 7 HOH A 423 HOH A 486 HOH A 515 SITE 1 AC5 2 ARG A 35 GLU A 116 SITE 1 AC6 4 HIS A 74 ASP A 152 HIS A 231 HIS A 232 SITE 1 AC7 4 GLU A 137 LYS A 140 THR A 202 HOH A 417 SITE 1 AC8 6 HIS A 146 ILE A 150 HIS A 186 ALA A 190 SITE 2 AC8 6 GLU A 197 ILD A 302 SITE 1 AC9 7 ARG A 177 HIS A 186 THR A 198 ILD A 302 SITE 2 AC9 7 HOH A 449 HOH A 461 HOH A 495 SITE 1 BC1 5 VAL A 123 SER A 126 THR A 129 HOH A 447 SITE 2 BC1 5 HOH A 452 CRYST1 117.850 47.480 62.330 90.00 120.11 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008485 0.000000 0.004921 0.00000 SCALE2 0.000000 0.021061 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018546 0.00000