data_3RJD # _entry.id 3RJD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3RJD RCSB RCSB065003 WWPDB D_1000065003 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RJD _pdbx_database_status.recvd_initial_deposition_date 2011-04-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lu, J.' 1 'Sun, P.D.' 2 # _citation.id primary _citation.title 'Crystal structure of Fc gamma receptor I and its implication in high affinity gamma-immunoglobulin binding.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 286 _citation.page_first 40608 _citation.page_last 40613 _citation.year 2011 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21965667 _citation.pdbx_database_id_DOI 10.1074/jbc.M111.257550 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lu, J.' 1 ? primary 'Ellsworth, J.L.' 2 ? primary 'Hamacher, N.' 3 ? primary 'Oak, S.W.' 4 ? primary 'Sun, P.D.' 5 ? # _cell.entry_id 3RJD _cell.length_a 92.828 _cell.length_b 92.828 _cell.length_c 90.763 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RJD _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'High affinity immunoglobulin gamma Fc receptor I' 29458.416 1 ? ? 'UNP residues 21-282' ? 2 branched man 'alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 3 branched man ;alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 732.682 1 ? ? ? ? 4 branched man 'alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 383.349 1 ? ? ? ? 5 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 6 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 7 non-polymer syn 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL 326.383 1 ? ? ? ? 8 water nat water 18.015 48 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'IgG Fc receptor I, Fc-gamma RI, FcRI, Fc-gamma RIA, FcgammaRIa' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEI HRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWC EAATEDGNVLKRSPELELQVLG ; _entity_poly.pdbx_seq_one_letter_code_can ;KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEI HRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWC EAATEDGNVLKRSPELELQVLG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ALA n 1 3 VAL n 1 4 ILE n 1 5 THR n 1 6 LEU n 1 7 GLN n 1 8 PRO n 1 9 PRO n 1 10 TRP n 1 11 VAL n 1 12 SER n 1 13 VAL n 1 14 PHE n 1 15 GLN n 1 16 GLU n 1 17 GLU n 1 18 THR n 1 19 VAL n 1 20 THR n 1 21 LEU n 1 22 HIS n 1 23 CYS n 1 24 GLU n 1 25 VAL n 1 26 LEU n 1 27 HIS n 1 28 LEU n 1 29 PRO n 1 30 GLY n 1 31 SER n 1 32 SER n 1 33 SER n 1 34 THR n 1 35 GLN n 1 36 TRP n 1 37 PHE n 1 38 LEU n 1 39 ASN n 1 40 GLY n 1 41 THR n 1 42 ALA n 1 43 THR n 1 44 GLN n 1 45 THR n 1 46 SER n 1 47 THR n 1 48 PRO n 1 49 SER n 1 50 TYR n 1 51 ARG n 1 52 ILE n 1 53 THR n 1 54 SER n 1 55 ALA n 1 56 SER n 1 57 VAL n 1 58 ASN n 1 59 ASP n 1 60 SER n 1 61 GLY n 1 62 GLU n 1 63 TYR n 1 64 ARG n 1 65 CYS n 1 66 GLN n 1 67 ARG n 1 68 GLY n 1 69 LEU n 1 70 SER n 1 71 GLY n 1 72 ARG n 1 73 SER n 1 74 ASP n 1 75 PRO n 1 76 ILE n 1 77 GLN n 1 78 LEU n 1 79 GLU n 1 80 ILE n 1 81 HIS n 1 82 ARG n 1 83 GLY n 1 84 TRP n 1 85 LEU n 1 86 LEU n 1 87 LEU n 1 88 GLN n 1 89 VAL n 1 90 SER n 1 91 SER n 1 92 ARG n 1 93 VAL n 1 94 PHE n 1 95 THR n 1 96 GLU n 1 97 GLY n 1 98 GLU n 1 99 PRO n 1 100 LEU n 1 101 ALA n 1 102 LEU n 1 103 ARG n 1 104 CYS n 1 105 HIS n 1 106 ALA n 1 107 TRP n 1 108 LYS n 1 109 ASP n 1 110 LYS n 1 111 LEU n 1 112 VAL n 1 113 TYR n 1 114 ASN n 1 115 VAL n 1 116 LEU n 1 117 TYR n 1 118 TYR n 1 119 ARG n 1 120 ASN n 1 121 GLY n 1 122 LYS n 1 123 ALA n 1 124 PHE n 1 125 LYS n 1 126 PHE n 1 127 PHE n 1 128 HIS n 1 129 TRP n 1 130 ASN n 1 131 SER n 1 132 ASN n 1 133 LEU n 1 134 THR n 1 135 ILE n 1 136 LEU n 1 137 LYS n 1 138 THR n 1 139 ASN n 1 140 ILE n 1 141 SER n 1 142 HIS n 1 143 ASN n 1 144 GLY n 1 145 THR n 1 146 TYR n 1 147 HIS n 1 148 CYS n 1 149 SER n 1 150 GLY n 1 151 MET n 1 152 GLY n 1 153 LYS n 1 154 HIS n 1 155 ARG n 1 156 TYR n 1 157 THR n 1 158 SER n 1 159 ALA n 1 160 GLY n 1 161 ILE n 1 162 SER n 1 163 VAL n 1 164 THR n 1 165 VAL n 1 166 LYS n 1 167 GLU n 1 168 LEU n 1 169 PHE n 1 170 PRO n 1 171 ALA n 1 172 PRO n 1 173 VAL n 1 174 LEU n 1 175 ASN n 1 176 ALA n 1 177 SER n 1 178 VAL n 1 179 THR n 1 180 SER n 1 181 PRO n 1 182 LEU n 1 183 LEU n 1 184 GLU n 1 185 GLY n 1 186 ASN n 1 187 LEU n 1 188 VAL n 1 189 THR n 1 190 LEU n 1 191 SER n 1 192 CYS n 1 193 GLU n 1 194 THR n 1 195 LYS n 1 196 LEU n 1 197 LEU n 1 198 LEU n 1 199 GLN n 1 200 ARG n 1 201 PRO n 1 202 GLY n 1 203 LEU n 1 204 GLN n 1 205 LEU n 1 206 TYR n 1 207 PHE n 1 208 SER n 1 209 PHE n 1 210 TYR n 1 211 MET n 1 212 GLY n 1 213 SER n 1 214 LYS n 1 215 THR n 1 216 LEU n 1 217 ARG n 1 218 GLY n 1 219 ARG n 1 220 ASN n 1 221 THR n 1 222 SER n 1 223 SER n 1 224 GLU n 1 225 TYR n 1 226 GLN n 1 227 ILE n 1 228 LEU n 1 229 THR n 1 230 ALA n 1 231 ARG n 1 232 ARG n 1 233 GLU n 1 234 ASP n 1 235 SER n 1 236 GLY n 1 237 LEU n 1 238 TYR n 1 239 TRP n 1 240 CYS n 1 241 GLU n 1 242 ALA n 1 243 ALA n 1 244 THR n 1 245 GLU n 1 246 ASP n 1 247 GLY n 1 248 ASN n 1 249 VAL n 1 250 LEU n 1 251 LYS n 1 252 ARG n 1 253 SER n 1 254 PRO n 1 255 GLU n 1 256 LEU n 1 257 GLU n 1 258 LEU n 1 259 GLN n 1 260 VAL n 1 261 LEU n 1 262 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'FCGR1A, FCG1, FCGR1, IGFR1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'Chinese hamster' _entity_src_gen.pdbx_host_org_scientific_name 'Cricetulus griseus' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 10029 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'CHINESE HAMSTER OVARY (CHO)' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FCGR1_HUMAN _struct_ref.pdbx_db_accession P12314 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEI HRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWC EAATEDGNVLKRSPELELQVLG ; _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RJD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 262 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P12314 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 282 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 21 _struct_ref_seq.pdbx_auth_seq_align_end 282 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose ? 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 P33 non-polymer . 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL 'HEPTAETHYLENE GLYCOL; PEG330' 'C14 H30 O8' 326.383 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3RJD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.83 _exptl_crystal.density_percent_sol 67.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '10% PEG8000 and 10% PEG1000, VAPOR DIFFUSION, HANGING DROP, temperature 295K' # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3RJD _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 40 _reflns.d_resolution_high 2.65 _reflns.number_obs 13522 _reflns.number_all 13522 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 87.17 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.65 _reflns_shell.d_res_low 2.86 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3RJD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13482 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.75 _refine.ls_d_res_high 2.65 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.250 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.248 _refine.ls_R_factor_R_free 0.276 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.080 _refine.ls_number_reflns_R_free 955 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.908 _refine.correlation_coeff_Fo_to_Fc_free 0.883 _refine.B_iso_mean 84.30 _refine.aniso_B[1][1] -3.69850 _refine.aniso_B[2][2] -3.69850 _refine.aniso_B[3][3] 7.39700 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3RJD _refine_analyze.Luzzati_coordinate_error_obs 0.54 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2036 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 191 _refine_hist.number_atoms_solvent 48 _refine_hist.number_atoms_total 2275 _refine_hist.d_res_high 2.65 _refine_hist.d_res_low 36.75 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.007 ? 2.000 2271 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 1.12 ? 2.000 3110 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.000 703 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.000 59 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.000 339 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.000 2271 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 2.59 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 20.02 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 327 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 2223 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 7 _refine_ls_shell.d_res_high 2.65 _refine_ls_shell.d_res_low 2.86 _refine_ls_shell.number_reflns_R_work 2517 _refine_ls_shell.R_factor_R_work 0.2848 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3041 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 7.02 _refine_ls_shell.number_reflns_R_free 190 _refine_ls_shell.number_reflns_all 2707 _refine_ls_shell.R_factor_all 0.2861 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3RJD _struct.title 'Crystal structure of Fc RI and its implication to high affinity immunoglobulin G binding' _struct.pdbx_descriptor 'High affinity immunoglobulin gamma Fc receptor I' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RJD _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 56 ? SER A 60 ? SER A 76 SER A 80 5 ? 5 HELX_P HELX_P2 2 LYS A 108 ? LYS A 110 ? LYS A 128 LYS A 130 5 ? 3 HELX_P HELX_P3 3 ASN A 139 ? ASN A 143 ? ASN A 159 ASN A 163 5 ? 5 HELX_P HELX_P4 4 ARG A 231 ? SER A 235 ? ARG A 251 SER A 255 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 65 SG ? ? A CYS 43 A CYS 85 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf2 disulf ? ? A CYS 104 SG ? ? ? 1_555 A CYS 148 SG ? ? A CYS 124 A CYS 168 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf3 disulf ? ? A CYS 192 SG ? ? ? 1_555 A CYS 240 SG ? ? A CYS 212 A CYS 260 1_555 ? ? ? ? ? ? ? 2.046 ? ? covale1 covale one ? F NAG . C1 ? ? ? 1_555 A ASN 58 ND2 ? ? A NAG 4 A ASN 78 1_555 ? ? ? ? ? ? ? 1.467 ? N-Glycosylation covale2 covale one ? G NAG . C1 ? ? ? 1_555 A ASN 175 ND2 ? ? A NAG 8 A ASN 195 1_555 ? ? ? ? ? ? ? 1.472 ? N-Glycosylation covale3 covale one ? A ASN 39 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 59 B NAG 1 1_555 ? ? ? ? ? ? ? 1.451 ? N-Glycosylation covale4 covale one ? A ASN 132 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 152 C NAG 1 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale5 covale one ? A ASN 139 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 159 D NAG 1 1_555 ? ? ? ? ? ? ? 1.465 ? N-Glycosylation covale6 covale one ? A ASN 143 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 163 E NAG 1 1_555 ? ? ? ? ? ? ? 1.461 ? N-Glycosylation covale7 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.438 ? ? covale8 covale both ? B NAG . O4 ? ? ? 1_555 B MAN . C1 ? ? B NAG 2 B MAN 3 1_555 ? ? ? ? ? ? ? 1.556 ? ? covale9 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.433 ? ? covale10 covale both ? C NAG . O6 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 4 1_555 ? ? ? ? ? ? ? 1.429 ? ? covale11 covale both ? C NAG . O4 ? ? ? 1_555 C MAN . C1 ? ? C NAG 2 C MAN 3 1_555 ? ? ? ? ? ? ? 1.446 ? ? covale12 covale both ? D NAG . O4 ? ? ? 1_555 D MAN . C1 ? ? D NAG 1 D MAN 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale13 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.448 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 29 A . ? PRO 49 A GLY 30 A ? GLY 50 A 1 5.95 2 SER 180 A . ? SER 200 A PRO 181 A ? PRO 201 A 1 1.79 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 5 ? D ? 7 ? E ? 3 ? F ? 2 ? G ? 4 ? H ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? parallel D 5 6 ? anti-parallel D 6 7 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 3 ? LEU A 6 ? VAL A 23 LEU A 26 A 2 VAL A 19 ? GLU A 24 ? VAL A 39 GLU A 44 A 3 SER A 49 ? ILE A 52 ? SER A 69 ILE A 72 B 1 SER A 12 ? PHE A 14 ? SER A 32 PHE A 34 B 2 ILE A 76 ? HIS A 81 ? ILE A 96 HIS A 101 B 3 GLY A 61 ? ARG A 67 ? GLY A 81 ARG A 87 B 4 THR A 34 ? LEU A 38 ? THR A 54 LEU A 58 B 5 THR A 41 ? ALA A 42 ? THR A 61 ALA A 62 C 1 VAL A 93 ? THR A 95 ? VAL A 113 THR A 115 C 2 ILE A 161 ? LYS A 166 ? ILE A 181 LYS A 186 C 3 GLY A 144 ? MET A 151 ? GLY A 164 MET A 171 C 4 TYR A 113 ? ARG A 119 ? TYR A 133 ARG A 139 C 5 LYS A 122 ? TRP A 129 ? LYS A 142 TRP A 149 D 1 VAL A 93 ? THR A 95 ? VAL A 113 THR A 115 D 2 ILE A 161 ? LYS A 166 ? ILE A 181 LYS A 186 D 3 GLY A 144 ? MET A 151 ? GLY A 164 MET A 171 D 4 ARG A 155 ? ALA A 159 ? ARG A 175 ALA A 179 D 5 LEU A 85 ? VAL A 89 ? LEU A 105 VAL A 109 D 6 LEU A 100 ? ALA A 106 ? LEU A 120 ALA A 126 D 7 LEU A 133 ? ILE A 135 ? LEU A 153 ILE A 155 E 1 VAL A 173 ? ALA A 176 ? VAL A 193 ALA A 196 E 2 VAL A 188 ? GLU A 193 ? VAL A 208 GLU A 213 E 3 GLU A 224 ? ILE A 227 ? GLU A 244 ILE A 247 F 1 LEU A 182 ? LEU A 183 ? LEU A 202 LEU A 203 F 2 VAL A 260 ? LEU A 261 ? VAL A 280 LEU A 281 G 1 LYS A 214 ? ASN A 220 ? LYS A 234 ASN A 240 G 2 LEU A 205 ? MET A 211 ? LEU A 225 MET A 231 G 3 GLY A 236 ? THR A 244 ? GLY A 256 THR A 264 G 4 LEU A 250 ? ARG A 252 ? LEU A 270 ARG A 272 H 1 LYS A 214 ? ASN A 220 ? LYS A 234 ASN A 240 H 2 LEU A 205 ? MET A 211 ? LEU A 225 MET A 231 H 3 GLY A 236 ? THR A 244 ? GLY A 256 THR A 264 H 4 LEU A 256 ? LEU A 258 ? LEU A 276 LEU A 278 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 5 ? N THR A 25 O HIS A 22 ? O HIS A 42 A 2 3 N LEU A 21 ? N LEU A 41 O TYR A 50 ? O TYR A 70 B 1 2 N VAL A 13 ? N VAL A 33 O HIS A 81 ? O HIS A 101 B 2 3 O LEU A 78 ? O LEU A 98 N GLY A 61 ? N GLY A 81 B 3 4 O ARG A 64 ? O ARG A 84 N PHE A 37 ? N PHE A 57 B 4 5 N LEU A 38 ? N LEU A 58 O THR A 41 ? O THR A 61 C 1 2 N PHE A 94 ? N PHE A 114 O LYS A 166 ? O LYS A 186 C 2 3 O ILE A 161 ? O ILE A 181 N TYR A 146 ? N TYR A 166 C 3 4 O MET A 151 ? O MET A 171 N TYR A 113 ? N TYR A 133 C 4 5 N TYR A 117 ? N TYR A 137 O PHE A 124 ? O PHE A 144 D 1 2 N PHE A 94 ? N PHE A 114 O LYS A 166 ? O LYS A 186 D 2 3 O ILE A 161 ? O ILE A 181 N TYR A 146 ? N TYR A 166 D 3 4 N CYS A 148 ? N CYS A 168 O SER A 158 ? O SER A 178 D 4 5 O ALA A 159 ? O ALA A 179 N LEU A 87 ? N LEU A 107 D 5 6 N GLN A 88 ? N GLN A 108 O ARG A 103 ? O ARG A 123 D 6 7 N LEU A 100 ? N LEU A 120 O ILE A 135 ? O ILE A 155 E 1 2 N ASN A 175 ? N ASN A 195 O SER A 191 ? O SER A 211 E 2 3 N LEU A 190 ? N LEU A 210 O TYR A 225 ? O TYR A 245 F 1 2 N LEU A 182 ? N LEU A 202 O LEU A 261 ? O LEU A 281 G 1 2 O ASN A 220 ? O ASN A 240 N PHE A 207 ? N PHE A 227 G 2 3 N TYR A 206 ? N TYR A 226 O ALA A 243 ? O ALA A 263 G 3 4 N ALA A 242 ? N ALA A 262 O LYS A 251 ? O LYS A 271 H 1 2 O ASN A 220 ? O ASN A 240 N PHE A 207 ? N PHE A 227 H 2 3 N TYR A 206 ? N TYR A 226 O ALA A 243 ? O ALA A 263 H 3 4 N TYR A 238 ? N TYR A 258 O LEU A 256 ? O LEU A 276 # _database_PDB_matrix.entry_id 3RJD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3RJD _atom_sites.fract_transf_matrix[1][1] 0.010773 _atom_sites.fract_transf_matrix[1][2] 0.006220 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012439 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011018 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 21 21 LYS LYS A . n A 1 2 ALA 2 22 22 ALA ALA A . n A 1 3 VAL 3 23 23 VAL VAL A . n A 1 4 ILE 4 24 24 ILE ILE A . n A 1 5 THR 5 25 25 THR THR A . n A 1 6 LEU 6 26 26 LEU LEU A . n A 1 7 GLN 7 27 27 GLN GLN A . n A 1 8 PRO 8 28 28 PRO PRO A . n A 1 9 PRO 9 29 29 PRO PRO A . n A 1 10 TRP 10 30 30 TRP TRP A . n A 1 11 VAL 11 31 31 VAL VAL A . n A 1 12 SER 12 32 32 SER SER A . n A 1 13 VAL 13 33 33 VAL VAL A . n A 1 14 PHE 14 34 34 PHE PHE A . n A 1 15 GLN 15 35 35 GLN GLN A . n A 1 16 GLU 16 36 36 GLU GLU A . n A 1 17 GLU 17 37 37 GLU GLU A . n A 1 18 THR 18 38 38 THR THR A . n A 1 19 VAL 19 39 39 VAL VAL A . n A 1 20 THR 20 40 40 THR THR A . n A 1 21 LEU 21 41 41 LEU LEU A . n A 1 22 HIS 22 42 42 HIS HIS A . n A 1 23 CYS 23 43 43 CYS CYS A . n A 1 24 GLU 24 44 44 GLU GLU A . n A 1 25 VAL 25 45 45 VAL VAL A . n A 1 26 LEU 26 46 46 LEU LEU A . n A 1 27 HIS 27 47 47 HIS HIS A . n A 1 28 LEU 28 48 48 LEU LEU A . n A 1 29 PRO 29 49 49 PRO PRO A . n A 1 30 GLY 30 50 50 GLY GLY A . n A 1 31 SER 31 51 51 SER SER A . n A 1 32 SER 32 52 52 SER SER A . n A 1 33 SER 33 53 53 SER SER A . n A 1 34 THR 34 54 54 THR THR A . n A 1 35 GLN 35 55 55 GLN GLN A . n A 1 36 TRP 36 56 56 TRP TRP A . n A 1 37 PHE 37 57 57 PHE PHE A . n A 1 38 LEU 38 58 58 LEU LEU A . n A 1 39 ASN 39 59 59 ASN ASN A . n A 1 40 GLY 40 60 60 GLY GLY A . n A 1 41 THR 41 61 61 THR THR A . n A 1 42 ALA 42 62 62 ALA ALA A . n A 1 43 THR 43 63 63 THR THR A . n A 1 44 GLN 44 64 64 GLN GLN A . n A 1 45 THR 45 65 65 THR THR A . n A 1 46 SER 46 66 66 SER SER A . n A 1 47 THR 47 67 67 THR THR A . n A 1 48 PRO 48 68 68 PRO PRO A . n A 1 49 SER 49 69 69 SER SER A . n A 1 50 TYR 50 70 70 TYR TYR A . n A 1 51 ARG 51 71 71 ARG ARG A . n A 1 52 ILE 52 72 72 ILE ILE A . n A 1 53 THR 53 73 73 THR THR A . n A 1 54 SER 54 74 74 SER SER A . n A 1 55 ALA 55 75 75 ALA ALA A . n A 1 56 SER 56 76 76 SER SER A . n A 1 57 VAL 57 77 77 VAL VAL A . n A 1 58 ASN 58 78 78 ASN ASN A . n A 1 59 ASP 59 79 79 ASP ASP A . n A 1 60 SER 60 80 80 SER SER A . n A 1 61 GLY 61 81 81 GLY GLY A . n A 1 62 GLU 62 82 82 GLU GLU A . n A 1 63 TYR 63 83 83 TYR TYR A . n A 1 64 ARG 64 84 84 ARG ARG A . n A 1 65 CYS 65 85 85 CYS CYS A . n A 1 66 GLN 66 86 86 GLN GLN A . n A 1 67 ARG 67 87 87 ARG ARG A . n A 1 68 GLY 68 88 88 GLY GLY A . n A 1 69 LEU 69 89 89 LEU LEU A . n A 1 70 SER 70 90 90 SER SER A . n A 1 71 GLY 71 91 91 GLY GLY A . n A 1 72 ARG 72 92 92 ARG ARG A . n A 1 73 SER 73 93 93 SER SER A . n A 1 74 ASP 74 94 94 ASP ASP A . n A 1 75 PRO 75 95 95 PRO PRO A . n A 1 76 ILE 76 96 96 ILE ILE A . n A 1 77 GLN 77 97 97 GLN GLN A . n A 1 78 LEU 78 98 98 LEU LEU A . n A 1 79 GLU 79 99 99 GLU GLU A . n A 1 80 ILE 80 100 100 ILE ILE A . n A 1 81 HIS 81 101 101 HIS HIS A . n A 1 82 ARG 82 102 102 ARG ARG A . n A 1 83 GLY 83 103 103 GLY GLY A . n A 1 84 TRP 84 104 104 TRP TRP A . n A 1 85 LEU 85 105 105 LEU LEU A . n A 1 86 LEU 86 106 106 LEU LEU A . n A 1 87 LEU 87 107 107 LEU LEU A . n A 1 88 GLN 88 108 108 GLN GLN A . n A 1 89 VAL 89 109 109 VAL VAL A . n A 1 90 SER 90 110 110 SER SER A . n A 1 91 SER 91 111 111 SER SER A . n A 1 92 ARG 92 112 112 ARG ARG A . n A 1 93 VAL 93 113 113 VAL VAL A . n A 1 94 PHE 94 114 114 PHE PHE A . n A 1 95 THR 95 115 115 THR THR A . n A 1 96 GLU 96 116 116 GLU GLU A . n A 1 97 GLY 97 117 117 GLY GLY A . n A 1 98 GLU 98 118 118 GLU GLU A . n A 1 99 PRO 99 119 119 PRO PRO A . n A 1 100 LEU 100 120 120 LEU LEU A . n A 1 101 ALA 101 121 121 ALA ALA A . n A 1 102 LEU 102 122 122 LEU LEU A . n A 1 103 ARG 103 123 123 ARG ARG A . n A 1 104 CYS 104 124 124 CYS CYS A . n A 1 105 HIS 105 125 125 HIS HIS A . n A 1 106 ALA 106 126 126 ALA ALA A . n A 1 107 TRP 107 127 127 TRP TRP A . n A 1 108 LYS 108 128 128 LYS LYS A . n A 1 109 ASP 109 129 129 ASP ASP A . n A 1 110 LYS 110 130 130 LYS LYS A . n A 1 111 LEU 111 131 131 LEU LEU A . n A 1 112 VAL 112 132 132 VAL VAL A . n A 1 113 TYR 113 133 133 TYR TYR A . n A 1 114 ASN 114 134 134 ASN ASN A . n A 1 115 VAL 115 135 135 VAL VAL A . n A 1 116 LEU 116 136 136 LEU LEU A . n A 1 117 TYR 117 137 137 TYR TYR A . n A 1 118 TYR 118 138 138 TYR TYR A . n A 1 119 ARG 119 139 139 ARG ARG A . n A 1 120 ASN 120 140 140 ASN ASN A . n A 1 121 GLY 121 141 141 GLY GLY A . n A 1 122 LYS 122 142 142 LYS LYS A . n A 1 123 ALA 123 143 143 ALA ALA A . n A 1 124 PHE 124 144 144 PHE PHE A . n A 1 125 LYS 125 145 145 LYS LYS A . n A 1 126 PHE 126 146 146 PHE PHE A . n A 1 127 PHE 127 147 147 PHE PHE A . n A 1 128 HIS 128 148 148 HIS HIS A . n A 1 129 TRP 129 149 149 TRP TRP A . n A 1 130 ASN 130 150 150 ASN ASN A . n A 1 131 SER 131 151 151 SER SER A . n A 1 132 ASN 132 152 152 ASN ASN A . n A 1 133 LEU 133 153 153 LEU LEU A . n A 1 134 THR 134 154 154 THR THR A . n A 1 135 ILE 135 155 155 ILE ILE A . n A 1 136 LEU 136 156 156 LEU LEU A . n A 1 137 LYS 137 157 157 LYS LYS A . n A 1 138 THR 138 158 158 THR THR A . n A 1 139 ASN 139 159 159 ASN ASN A . n A 1 140 ILE 140 160 160 ILE ILE A . n A 1 141 SER 141 161 161 SER SER A . n A 1 142 HIS 142 162 162 HIS HIS A . n A 1 143 ASN 143 163 163 ASN ASN A . n A 1 144 GLY 144 164 164 GLY GLY A . n A 1 145 THR 145 165 165 THR THR A . n A 1 146 TYR 146 166 166 TYR TYR A . n A 1 147 HIS 147 167 167 HIS HIS A . n A 1 148 CYS 148 168 168 CYS CYS A . n A 1 149 SER 149 169 169 SER SER A . n A 1 150 GLY 150 170 170 GLY GLY A . n A 1 151 MET 151 171 171 MET MET A . n A 1 152 GLY 152 172 172 GLY GLY A . n A 1 153 LYS 153 173 173 LYS LYS A . n A 1 154 HIS 154 174 174 HIS HIS A . n A 1 155 ARG 155 175 175 ARG ARG A . n A 1 156 TYR 156 176 176 TYR TYR A . n A 1 157 THR 157 177 177 THR THR A . n A 1 158 SER 158 178 178 SER SER A . n A 1 159 ALA 159 179 179 ALA ALA A . n A 1 160 GLY 160 180 180 GLY GLY A . n A 1 161 ILE 161 181 181 ILE ILE A . n A 1 162 SER 162 182 182 SER SER A . n A 1 163 VAL 163 183 183 VAL VAL A . n A 1 164 THR 164 184 184 THR THR A . n A 1 165 VAL 165 185 185 VAL VAL A . n A 1 166 LYS 166 186 186 LYS LYS A . n A 1 167 GLU 167 187 187 GLU GLU A . n A 1 168 LEU 168 188 188 LEU LEU A . n A 1 169 PHE 169 189 189 PHE PHE A . n A 1 170 PRO 170 190 190 PRO PRO A . n A 1 171 ALA 171 191 191 ALA ALA A . n A 1 172 PRO 172 192 192 PRO PRO A . n A 1 173 VAL 173 193 193 VAL VAL A . n A 1 174 LEU 174 194 194 LEU LEU A . n A 1 175 ASN 175 195 195 ASN ASN A . n A 1 176 ALA 176 196 196 ALA ALA A . n A 1 177 SER 177 197 197 SER SER A . n A 1 178 VAL 178 198 198 VAL VAL A . n A 1 179 THR 179 199 199 THR THR A . n A 1 180 SER 180 200 200 SER SER A . n A 1 181 PRO 181 201 201 PRO PRO A . n A 1 182 LEU 182 202 202 LEU LEU A . n A 1 183 LEU 183 203 203 LEU LEU A . n A 1 184 GLU 184 204 204 GLU GLU A . n A 1 185 GLY 185 205 205 GLY GLY A . n A 1 186 ASN 186 206 206 ASN ASN A . n A 1 187 LEU 187 207 207 LEU LEU A . n A 1 188 VAL 188 208 208 VAL VAL A . n A 1 189 THR 189 209 209 THR THR A . n A 1 190 LEU 190 210 210 LEU LEU A . n A 1 191 SER 191 211 211 SER SER A . n A 1 192 CYS 192 212 212 CYS CYS A . n A 1 193 GLU 193 213 213 GLU GLU A . n A 1 194 THR 194 214 214 THR THR A . n A 1 195 LYS 195 215 215 LYS LYS A . n A 1 196 LEU 196 216 216 LEU LEU A . n A 1 197 LEU 197 217 217 LEU LEU A . n A 1 198 LEU 198 218 218 LEU LEU A . n A 1 199 GLN 199 219 ? ? ? A . n A 1 200 ARG 200 220 ? ? ? A . n A 1 201 PRO 201 221 ? ? ? A . n A 1 202 GLY 202 222 ? ? ? A . n A 1 203 LEU 203 223 ? ? ? A . n A 1 204 GLN 204 224 224 GLN GLN A . n A 1 205 LEU 205 225 225 LEU LEU A . n A 1 206 TYR 206 226 226 TYR TYR A . n A 1 207 PHE 207 227 227 PHE PHE A . n A 1 208 SER 208 228 228 SER SER A . n A 1 209 PHE 209 229 229 PHE PHE A . n A 1 210 TYR 210 230 230 TYR TYR A . n A 1 211 MET 211 231 231 MET MET A . n A 1 212 GLY 212 232 232 GLY GLY A . n A 1 213 SER 213 233 233 SER SER A . n A 1 214 LYS 214 234 234 LYS LYS A . n A 1 215 THR 215 235 235 THR THR A . n A 1 216 LEU 216 236 236 LEU LEU A . n A 1 217 ARG 217 237 237 ARG ARG A . n A 1 218 GLY 218 238 238 GLY GLY A . n A 1 219 ARG 219 239 239 ARG ARG A . n A 1 220 ASN 220 240 240 ASN ASN A . n A 1 221 THR 221 241 241 THR THR A . n A 1 222 SER 222 242 242 SER SER A . n A 1 223 SER 223 243 243 SER SER A . n A 1 224 GLU 224 244 244 GLU GLU A . n A 1 225 TYR 225 245 245 TYR TYR A . n A 1 226 GLN 226 246 246 GLN GLN A . n A 1 227 ILE 227 247 247 ILE ILE A . n A 1 228 LEU 228 248 248 LEU LEU A . n A 1 229 THR 229 249 249 THR THR A . n A 1 230 ALA 230 250 250 ALA ALA A . n A 1 231 ARG 231 251 251 ARG ARG A . n A 1 232 ARG 232 252 252 ARG ARG A . n A 1 233 GLU 233 253 253 GLU GLU A . n A 1 234 ASP 234 254 254 ASP ASP A . n A 1 235 SER 235 255 255 SER SER A . n A 1 236 GLY 236 256 256 GLY GLY A . n A 1 237 LEU 237 257 257 LEU LEU A . n A 1 238 TYR 238 258 258 TYR TYR A . n A 1 239 TRP 239 259 259 TRP TRP A . n A 1 240 CYS 240 260 260 CYS CYS A . n A 1 241 GLU 241 261 261 GLU GLU A . n A 1 242 ALA 242 262 262 ALA ALA A . n A 1 243 ALA 243 263 263 ALA ALA A . n A 1 244 THR 244 264 264 THR THR A . n A 1 245 GLU 245 265 265 GLU GLU A . n A 1 246 ASP 246 266 266 ASP ASP A . n A 1 247 GLY 247 267 267 GLY GLY A . n A 1 248 ASN 248 268 268 ASN ASN A . n A 1 249 VAL 249 269 269 VAL VAL A . n A 1 250 LEU 250 270 270 LEU LEU A . n A 1 251 LYS 251 271 271 LYS LYS A . n A 1 252 ARG 252 272 272 ARG ARG A . n A 1 253 SER 253 273 273 SER SER A . n A 1 254 PRO 254 274 274 PRO PRO A . n A 1 255 GLU 255 275 275 GLU GLU A . n A 1 256 LEU 256 276 276 LEU LEU A . n A 1 257 GLU 257 277 277 GLU GLU A . n A 1 258 LEU 258 278 278 LEU LEU A . n A 1 259 GLN 259 279 279 GLN GLN A . n A 1 260 VAL 260 280 280 VAL VAL A . n A 1 261 LEU 261 281 281 LEU LEU A . n A 1 262 GLY 262 282 282 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 NAG 1 4 4 NAG NAG A . G 6 NAG 1 8 8 NAG NAG A . H 7 P33 1 1 1 P33 15P A . I 8 HOH 1 2 2 HOH HOH A . I 8 HOH 2 3 3 HOH HOH A . I 8 HOH 3 5 5 HOH HOH A . I 8 HOH 4 6 6 HOH HOH A . I 8 HOH 5 7 7 HOH HOH A . I 8 HOH 6 9 9 HOH HOH A . I 8 HOH 7 14 14 HOH HOH A . I 8 HOH 8 15 15 HOH HOH A . I 8 HOH 9 17 17 HOH HOH A . I 8 HOH 10 18 18 HOH HOH A . I 8 HOH 11 19 19 HOH HOH A . I 8 HOH 12 286 1 HOH HOH A . I 8 HOH 13 287 4 HOH HOH A . I 8 HOH 14 288 8 HOH HOH A . I 8 HOH 15 289 10 HOH HOH A . I 8 HOH 16 290 11 HOH HOH A . I 8 HOH 17 291 12 HOH HOH A . I 8 HOH 18 292 21 HOH HOH A . I 8 HOH 19 293 22 HOH HOH A . I 8 HOH 20 294 23 HOH HOH A . I 8 HOH 21 295 24 HOH HOH A . I 8 HOH 22 296 25 HOH HOH A . I 8 HOH 23 297 26 HOH HOH A . I 8 HOH 24 298 27 HOH HOH A . I 8 HOH 25 299 28 HOH HOH A . I 8 HOH 26 300 29 HOH HOH A . I 8 HOH 27 301 31 HOH HOH A . I 8 HOH 28 302 32 HOH HOH A . I 8 HOH 29 303 33 HOH HOH A . I 8 HOH 30 304 34 HOH HOH A . I 8 HOH 31 305 36 HOH HOH A . I 8 HOH 32 306 37 HOH HOH A . I 8 HOH 33 307 38 HOH HOH A . I 8 HOH 34 308 39 HOH HOH A . I 8 HOH 35 309 40 HOH HOH A . I 8 HOH 36 310 41 HOH HOH A . I 8 HOH 37 311 42 HOH HOH A . I 8 HOH 38 312 43 HOH HOH A . I 8 HOH 39 313 44 HOH HOH A . I 8 HOH 40 314 45 HOH HOH A . I 8 HOH 41 315 46 HOH HOH A . I 8 HOH 42 316 47 HOH HOH A . I 8 HOH 43 317 49 HOH HOH A . I 8 HOH 44 318 50 HOH HOH A . I 8 HOH 45 319 51 HOH HOH A . I 8 HOH 46 320 52 HOH HOH A . I 8 HOH 47 321 53 HOH HOH A . I 8 HOH 48 322 54 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 132 A ASN 152 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 39 A ASN 59 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 143 A ASN 163 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 139 A ASN 159 ? ASN 'GLYCOSYLATION SITE' 5 A ASN 58 A ASN 78 ? ASN 'GLYCOSYLATION SITE' 6 A ASN 175 A ASN 195 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-21 2 'Structure model' 1 1 2013-08-28 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' atom_site 3 4 'Structure model' atom_site_anisotrop 4 4 'Structure model' chem_comp 5 4 'Structure model' entity 6 4 'Structure model' pdbx_branch_scheme 7 4 'Structure model' pdbx_chem_comp_identifier 8 4 'Structure model' pdbx_entity_branch 9 4 'Structure model' pdbx_entity_branch_descriptor 10 4 'Structure model' pdbx_entity_branch_link 11 4 'Structure model' pdbx_entity_branch_list 12 4 'Structure model' pdbx_entity_nonpoly 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' pdbx_struct_assembly_gen 15 4 'Structure model' pdbx_validate_close_contact 16 4 'Structure model' struct_asym 17 4 'Structure model' struct_conn 18 4 'Structure model' struct_site 19 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.type_symbol' 14 4 'Structure model' '_atom_site_anisotrop.U[1][1]' 15 4 'Structure model' '_atom_site_anisotrop.U[1][2]' 16 4 'Structure model' '_atom_site_anisotrop.U[1][3]' 17 4 'Structure model' '_atom_site_anisotrop.U[2][2]' 18 4 'Structure model' '_atom_site_anisotrop.U[2][3]' 19 4 'Structure model' '_atom_site_anisotrop.U[3][3]' 20 4 'Structure model' '_atom_site_anisotrop.id' 21 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 22 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 23 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 24 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 25 4 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 26 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 27 4 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 28 4 'Structure model' '_atom_site_anisotrop.type_symbol' 29 4 'Structure model' '_chem_comp.name' 30 4 'Structure model' '_chem_comp.pdbx_synonyms' 31 4 'Structure model' '_chem_comp.type' 32 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 33 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 34 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 35 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 36 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 37 4 'Structure model' '_struct_conn.pdbx_dist_value' 38 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 39 4 'Structure model' '_struct_conn.pdbx_role' 40 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 41 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 42 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 43 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 44 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 45 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 46 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 47 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 48 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 49 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 50 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 51 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 52 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 53 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 BALBES phasing . ? 2 PHASER phasing . ? 3 BUSTER refinement 2.8.0 ? 4 HKL-2000 'data reduction' . ? 5 HKL-2000 'data scaling' . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O3 _pdbx_validate_close_contact.auth_asym_id_1 D _pdbx_validate_close_contact.auth_comp_id_1 NAG _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O2 _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 MAN _pdbx_validate_close_contact.auth_seq_id_2 2 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A LEU 48 ? ? O A LEU 48 ? ? 1.094 1.229 -0.135 0.019 N 2 1 CB A ARG 102 ? ? CG A ARG 102 ? ? 1.356 1.521 -0.165 0.027 N 3 1 C A ARG 102 ? ? O A ARG 102 ? ? 1.035 1.229 -0.194 0.019 N 4 1 CA A LYS 157 ? ? C A LYS 157 ? ? 1.350 1.525 -0.175 0.026 N 5 1 C A LYS 157 ? ? O A LYS 157 ? ? 1.028 1.229 -0.201 0.019 N 6 1 CA A ASP 266 ? ? C A ASP 266 ? ? 1.307 1.525 -0.218 0.026 N 7 1 C A ASP 266 ? ? O A ASP 266 ? ? 1.061 1.229 -0.168 0.019 N 8 1 CA A ASN 268 ? ? C A ASN 268 ? ? 1.293 1.525 -0.232 0.026 N 9 1 C A ASN 268 ? ? O A ASN 268 ? ? 1.071 1.229 -0.158 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A HIS 47 ? ? CA A HIS 47 ? ? C A HIS 47 ? ? 90.92 111.00 -20.08 2.70 N 2 1 CB A LEU 48 ? ? CA A LEU 48 ? ? C A LEU 48 ? ? 88.62 110.20 -21.58 1.90 N 3 1 CA A LEU 48 ? ? CB A LEU 48 ? ? CG A LEU 48 ? ? 100.21 115.30 -15.09 2.30 N 4 1 CB A LEU 48 ? ? CG A LEU 48 ? ? CD2 A LEU 48 ? ? 99.95 111.00 -11.05 1.70 N 5 1 N A SER 53 ? ? CA A SER 53 ? ? C A SER 53 ? ? 91.86 111.00 -19.14 2.70 N 6 1 CB A ARG 102 ? ? CA A ARG 102 ? ? C A ARG 102 ? ? 97.38 110.40 -13.02 2.00 N 7 1 C A THR 158 ? ? N A ASN 159 ? ? CA A ASN 159 ? ? 138.26 121.70 16.56 2.50 Y 8 1 CB A ASP 266 ? ? CA A ASP 266 ? ? C A ASP 266 ? ? 94.53 110.40 -15.87 2.00 N 9 1 CB A ASN 268 ? ? CA A ASN 268 ? ? C A ASN 268 ? ? 97.93 110.40 -12.47 2.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 36 ? ? 83.46 7.31 2 1 SER A 51 ? ? 62.60 -133.70 3 1 LEU A 188 ? ? -83.14 -70.93 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 219 ? A GLN 199 2 1 Y 1 A ARG 220 ? A ARG 200 3 1 Y 1 A PRO 221 ? A PRO 201 4 1 Y 1 A GLY 222 ? A GLY 202 5 1 Y 1 A LEU 223 ? A LEU 203 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 S NAG 242 n B 2 NAG 2 B NAG 2 S NAG 243 n B 2 MAN 3 B MAN 3 A MAN 285 n C 3 NAG 1 C NAG 1 S NAG 10 n C 3 NAG 2 C NAG 2 A NAG 11 n C 3 MAN 3 C MAN 3 A MAN 12 n C 3 FUC 4 C FUC 4 D FUC 999 n D 4 NAG 1 D NAG 1 C NAG 367 n D 4 MAN 2 D MAN 2 C MAN 368 n E 5 NAG 1 E NAG 1 B NAG 366 n E 5 NAG 2 E NAG 2 B NAG 369 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide 5 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpa1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}}' LINUCS PDB-CARE ? 4 3 'DManpa1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-3/a4-b1_a6-d1_b4-c1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? 7 4 DManpa1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 8 4 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 9 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}' LINUCS PDB-CARE ? 10 5 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 11 5 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 12 5 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 MAN C1 O1 2 NAG O4 HO4 sing ? 3 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 4 3 3 MAN C1 O1 2 NAG O4 HO4 sing ? 5 3 4 FUC C1 O1 1 NAG O6 HO6 sing ? 6 4 2 MAN C1 O1 1 NAG O4 HO4 sing ? 7 5 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 MAN 3 n 3 NAG 1 n 3 NAG 2 n 3 MAN 3 n 3 FUC 4 n 4 NAG 1 n 4 MAN 2 n 5 NAG 1 n 5 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 6 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 7 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL P33 8 water HOH #