HEADER HYDROLASE 16-APR-11 3RK1 TITLE 'X-RAY CRYSTAL STRUCTURE OF THE PUTATIVE N-TYPE ATP PYROPHOSPHATASE TITLE 2 (PF0828) IN COMPLEX WITH ATP FROM PYROCOCCUS FURIOSUS, NORTHEAST TITLE 3 STRUCTURAL GENOMICS CONSORTIUM TARGET PFR23 COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-TYPE ATP PYROPHOSPHATASE SUPERFAMILY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 186497; SOURCE 4 STRAIN: DSM 3638; SOURCE 5 GENE: PF0828; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, NORTHEAST STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, NESG, ALPHA-BETA PROTEIN THAT BINDS ATP AND AMP, N-TYPE KEYWDS 3 ATP PYROPHOSPHATASE, ATP AND AMP, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.FOROUHAR,J.SEETHARAMAN,J.JANJUA,R.XIAO,K.CUNNINGHAM,L.MA,R.SHASTRY, AUTHOR 2 J.K.EVERETT,R.NAIR,T.B.ACTON,B.ROST,G.T.MONTELIONE,J.F.HUNT,L.TONG, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 4 06-DEC-23 3RK1 1 REMARK REVDAT 3 13-SEP-23 3RK1 1 REMARK SEQADV LINK REVDAT 2 11-JAN-12 3RK1 1 JRNL VERSN REVDAT 1 11-MAY-11 3RK1 0 JRNL AUTH F.FOROUHAR,N.SAADAT,M.HUSSAIN,J.SEETHARAMAN,I.LEE,H.JANJUA, JRNL AUTH 2 R.XIAO,R.SHASTRY,T.B.ACTON,G.T.MONTELIONE,L.TONG JRNL TITL A LARGE CONFORMATIONAL CHANGE IN THE PUTATIVE ATP JRNL TITL 2 PYROPHOSPHATASE PF0828 INDUCED BY ATP BINDING. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 67 1323 2011 JRNL REFN ESSN 1744-3091 JRNL PMID 22102225 JRNL DOI 10.1107/S1744309111031447 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 & XTALVIEW REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 169881.760 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 83.0 REMARK 3 NUMBER OF REFLECTIONS : 37778 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.700 REMARK 3 FREE R VALUE TEST SET COUNT : 3683 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2390 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 244 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3516 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 77 REMARK 3 SOLVENT ATOMS : 162 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.13000 REMARK 3 B22 (A**2) : 6.92000 REMARK 3 B33 (A**2) : -4.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM SIGMAA (A) : 0.21 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.24 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.690 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 34.10 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RK1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000065027. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97905 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45097 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : 0.06800 REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.33100 REMARK 200 R SYM FOR SHELL (I) : 0.29600 REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: COMO REMARK 200 STARTING MODEL: 3RJZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 10 MM TRIS (PH 7.5), REMARK 280 100 MM SODIUM CHLORIDE, 5 MM DTT, 0.02% NAN3, AND 5MM ATP. REMARK 280 RESERVOIR SOLUTION: 100MM TRIS (PH 8.5), 300MM (NH4)HPO4 AND 1% REMARK 280 (W/V) PEG8000., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.48950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.06700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.03600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.06700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.48950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.03600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 VAL A 2 REMARK 465 GLY A 3 REMARK 465 LEU A 4 REMARK 465 ALA A 123 REMARK 465 TRP A 124 REMARK 465 GLY A 125 REMARK 465 ARG A 126 REMARK 465 LEU A 230 REMARK 465 GLU A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 HIS A 234 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 HIS A 237 REMARK 465 MSE B 1 REMARK 465 VAL B 2 REMARK 465 GLY B 3 REMARK 465 ALA B 123 REMARK 465 TRP B 124 REMARK 465 GLY B 125 REMARK 465 ARG B 126 REMARK 465 GLU B 231 REMARK 465 HIS B 232 REMARK 465 HIS B 233 REMARK 465 HIS B 234 REMARK 465 HIS B 235 REMARK 465 HIS B 236 REMARK 465 HIS B 237 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 148 79.02 -163.71 REMARK 500 ALA A 149 134.65 -171.25 REMARK 500 LYS B 75 -93.42 -3.73 REMARK 500 ALA B 100 -176.35 -58.15 REMARK 500 SER B 148 69.32 -155.93 REMARK 500 ALA B 149 141.95 -173.02 REMARK 500 ASP B 162 -150.38 -106.49 REMARK 500 MSE B 194 147.99 -171.90 REMARK 500 GLU B 223 116.30 -174.31 REMARK 500 SER B 228 157.11 -49.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RJZ RELATED DB: PDB REMARK 900 THIS IS THE APO STRUCTURE REMARK 900 RELATED ID: 3RK0 RELATED DB: PDB REMARK 900 THIS IS THE AMP-BOUND STRUCTURE REMARK 900 RELATED ID: PFR23 RELATED DB: TARGETDB DBREF 3RK1 A 1 229 UNP Q8U2K6 Q8U2K6_PYRFU 1 229 DBREF 3RK1 B 1 229 UNP Q8U2K6 Q8U2K6_PYRFU 1 229 SEQADV 3RK1 LEU A 230 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 GLU A 231 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS A 232 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS A 233 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS A 234 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS A 235 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS A 236 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS A 237 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 LEU B 230 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 GLU B 231 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS B 232 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS B 233 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS B 234 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS B 235 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS B 236 UNP Q8U2K6 EXPRESSION TAG SEQADV 3RK1 HIS B 237 UNP Q8U2K6 EXPRESSION TAG SEQRES 1 A 237 MSE VAL GLY LEU ALA ASP VAL ALA VAL LEU TYR SER GLY SEQRES 2 A 237 GLY LYS ASP SER ASN TYR ALA LEU TYR TRP ALA ILE LYS SEQRES 3 A 237 ASN ARG PHE SER VAL LYS PHE LEU VAL THR MSE VAL SER SEQRES 4 A 237 GLU ASN GLU GLU SER TYR MSE TYR HIS THR ILE ASN ALA SEQRES 5 A 237 ASN LEU THR ASP LEU GLN ALA ARG ALA LEU GLY ILE PRO SEQRES 6 A 237 LEU VAL LYS GLY PHE THR GLN GLY GLU LYS GLU LYS GLU SEQRES 7 A 237 VAL GLU ASP LEU LYS ARG VAL LEU SER GLY LEU LYS ILE SEQRES 8 A 237 GLN GLY ILE VAL ALA GLY ALA LEU ALA SER LYS TYR GLN SEQRES 9 A 237 ARG LYS ARG ILE GLU LYS VAL ALA LYS GLU LEU GLY LEU SEQRES 10 A 237 GLU VAL TYR THR PRO ALA TRP GLY ARG ASP ALA LYS GLU SEQRES 11 A 237 TYR MSE ARG GLU LEU LEU ASN LEU GLY PHE LYS ILE MSE SEQRES 12 A 237 VAL VAL GLY VAL SER ALA TYR GLY LEU ASP GLU SER TRP SEQRES 13 A 237 LEU GLY ARG ILE LEU ASP GLU SER ALA LEU GLU GLU LEU SEQRES 14 A 237 ILE THR LEU ASN GLU LYS TYR LYS VAL HIS VAL ALA GLY SEQRES 15 A 237 GLU GLY GLY GLU PHE GLU THR PHE VAL LEU ASP MSE PRO SEQRES 16 A 237 LEU PHE LYS TYR LYS ILE VAL VAL ASP LYS ALA LYS LYS SEQRES 17 A 237 VAL TRP GLU PRO CYS THR SER SER GLY LYS LEU ILE ILE SEQRES 18 A 237 GLU GLU ALA HIS LEU GLU SER LYS LEU GLU HIS HIS HIS SEQRES 19 A 237 HIS HIS HIS SEQRES 1 B 237 MSE VAL GLY LEU ALA ASP VAL ALA VAL LEU TYR SER GLY SEQRES 2 B 237 GLY LYS ASP SER ASN TYR ALA LEU TYR TRP ALA ILE LYS SEQRES 3 B 237 ASN ARG PHE SER VAL LYS PHE LEU VAL THR MSE VAL SER SEQRES 4 B 237 GLU ASN GLU GLU SER TYR MSE TYR HIS THR ILE ASN ALA SEQRES 5 B 237 ASN LEU THR ASP LEU GLN ALA ARG ALA LEU GLY ILE PRO SEQRES 6 B 237 LEU VAL LYS GLY PHE THR GLN GLY GLU LYS GLU LYS GLU SEQRES 7 B 237 VAL GLU ASP LEU LYS ARG VAL LEU SER GLY LEU LYS ILE SEQRES 8 B 237 GLN GLY ILE VAL ALA GLY ALA LEU ALA SER LYS TYR GLN SEQRES 9 B 237 ARG LYS ARG ILE GLU LYS VAL ALA LYS GLU LEU GLY LEU SEQRES 10 B 237 GLU VAL TYR THR PRO ALA TRP GLY ARG ASP ALA LYS GLU SEQRES 11 B 237 TYR MSE ARG GLU LEU LEU ASN LEU GLY PHE LYS ILE MSE SEQRES 12 B 237 VAL VAL GLY VAL SER ALA TYR GLY LEU ASP GLU SER TRP SEQRES 13 B 237 LEU GLY ARG ILE LEU ASP GLU SER ALA LEU GLU GLU LEU SEQRES 14 B 237 ILE THR LEU ASN GLU LYS TYR LYS VAL HIS VAL ALA GLY SEQRES 15 B 237 GLU GLY GLY GLU PHE GLU THR PHE VAL LEU ASP MSE PRO SEQRES 16 B 237 LEU PHE LYS TYR LYS ILE VAL VAL ASP LYS ALA LYS LYS SEQRES 17 B 237 VAL TRP GLU PRO CYS THR SER SER GLY LYS LEU ILE ILE SEQRES 18 B 237 GLU GLU ALA HIS LEU GLU SER LYS LEU GLU HIS HIS HIS SEQRES 19 B 237 HIS HIS HIS MODRES 3RK1 MSE A 37 MET SELENOMETHIONINE MODRES 3RK1 MSE A 46 MET SELENOMETHIONINE MODRES 3RK1 MSE A 132 MET SELENOMETHIONINE MODRES 3RK1 MSE A 143 MET SELENOMETHIONINE MODRES 3RK1 MSE A 194 MET SELENOMETHIONINE MODRES 3RK1 MSE B 37 MET SELENOMETHIONINE MODRES 3RK1 MSE B 46 MET SELENOMETHIONINE MODRES 3RK1 MSE B 132 MET SELENOMETHIONINE MODRES 3RK1 MSE B 143 MET SELENOMETHIONINE MODRES 3RK1 MSE B 194 MET SELENOMETHIONINE HET MSE A 37 8 HET MSE A 46 8 HET MSE A 132 8 HET MSE A 143 8 HET MSE A 194 8 HET MSE B 37 8 HET MSE B 46 8 HET MSE B 132 8 HET MSE B 143 8 HET MSE B 194 8 HET ATP A 301 31 HET PO4 A 302 5 HET PO4 A 303 5 HET ATP B 301 31 HET PO4 B 302 5 HETNAM MSE SELENOMETHIONINE HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM PO4 PHOSPHATE ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 4 PO4 3(O4 P 3-) FORMUL 8 HOH *162(H2 O) HELIX 1 1 GLY A 14 ASN A 27 1 14 HELIX 2 2 ASN A 51 ASN A 53 5 3 HELIX 3 3 LEU A 54 GLY A 63 1 10 HELIX 4 4 GLU A 74 GLU A 76 5 3 HELIX 5 5 LYS A 77 SER A 87 1 11 HELIX 6 6 SER A 101 LEU A 115 1 15 HELIX 7 7 ASP A 127 LEU A 138 1 12 HELIX 8 8 ASP A 153 LEU A 157 5 5 HELIX 9 9 ASP A 162 TYR A 176 1 15 HELIX 10 10 GLY B 14 ASN B 27 1 14 HELIX 11 11 LEU B 54 GLY B 63 1 10 HELIX 12 12 GLU B 76 SER B 87 1 12 HELIX 13 13 SER B 101 GLY B 116 1 16 HELIX 14 14 ASP B 127 LEU B 138 1 12 HELIX 15 15 ASP B 153 LEU B 157 5 5 HELIX 16 16 ASP B 162 LYS B 177 1 16 SHEET 1 A10 GLU A 118 TYR A 120 0 SHEET 2 A10 GLY A 93 VAL A 95 1 N ILE A 94 O TYR A 120 SHEET 3 A10 ASP A 6 LEU A 10 1 N LEU A 10 O VAL A 95 SHEET 4 A10 SER A 30 SER A 39 1 O VAL A 35 N VAL A 9 SHEET 5 A10 LEU A 66 THR A 71 1 O VAL A 67 N THR A 36 SHEET 6 A10 LEU B 66 THR B 71 -1 O LEU B 66 N LYS A 68 SHEET 7 A10 SER B 30 SER B 39 1 N LEU B 34 O VAL B 67 SHEET 8 A10 ASP B 6 LEU B 10 1 N VAL B 7 O SER B 30 SHEET 9 A10 GLY B 93 VAL B 95 1 O VAL B 95 N LEU B 10 SHEET 10 A10 GLU B 118 TYR B 120 1 O TYR B 120 N ILE B 94 SHEET 1 B 4 PHE A 187 ASP A 193 0 SHEET 2 B 4 LYS A 141 VAL A 147 -1 N GLY A 146 O GLU A 188 SHEET 3 B 4 SER A 216 GLU A 227 -1 O LEU A 219 N VAL A 145 SHEET 4 B 4 LYS A 200 GLU A 211 -1 N GLU A 211 O SER A 216 SHEET 1 C 4 PHE B 187 ASP B 193 0 SHEET 2 C 4 LYS B 141 VAL B 147 -1 N VAL B 145 O GLU B 188 SHEET 3 C 4 SER B 216 GLU B 227 -1 O LEU B 219 N VAL B 145 SHEET 4 C 4 LYS B 200 GLU B 211 -1 N GLU B 211 O SER B 216 LINK C THR A 36 N MSE A 37 1555 1555 1.32 LINK C MSE A 37 N VAL A 38 1555 1555 1.33 LINK C TYR A 45 N MSE A 46 1555 1555 1.33 LINK C MSE A 46 N TYR A 47 1555 1555 1.32 LINK C TYR A 131 N MSE A 132 1555 1555 1.33 LINK C MSE A 132 N ARG A 133 1555 1555 1.33 LINK C ILE A 142 N MSE A 143 1555 1555 1.33 LINK C MSE A 143 N VAL A 144 1555 1555 1.33 LINK C ASP A 193 N MSE A 194 1555 1555 1.32 LINK C MSE A 194 N PRO A 195 1555 1555 1.34 LINK C THR B 36 N MSE B 37 1555 1555 1.33 LINK C MSE B 37 N VAL B 38 1555 1555 1.32 LINK C TYR B 45 N MSE B 46 1555 1555 1.33 LINK C MSE B 46 N TYR B 47 1555 1555 1.33 LINK C TYR B 131 N MSE B 132 1555 1555 1.33 LINK C MSE B 132 N ARG B 133 1555 1555 1.33 LINK C ILE B 142 N MSE B 143 1555 1555 1.34 LINK C MSE B 143 N VAL B 144 1555 1555 1.33 LINK C ASP B 193 N MSE B 194 1555 1555 1.32 LINK C MSE B 194 N PRO B 195 1555 1555 1.34 SITE 1 AC1 16 LEU A 10 SER A 12 GLY A 14 LYS A 15 SITE 2 AC1 16 ASP A 16 SER A 17 VAL A 35 MSE A 37 SITE 3 AC1 16 TYR A 47 HIS A 48 ALA A 96 GLY A 97 SITE 4 AC1 16 GLN A 104 GLU A 188 THR A 189 HOH A 288 SITE 1 AC2 6 ALA A 128 HIS A 179 VAL A 180 ALA A 181 SITE 2 AC2 6 GLU A 183 HOH A 318 SITE 1 AC3 8 LYS A 77 GLU A 80 ASP A 81 ARG A 84 SITE 2 AC3 8 LYS A 208 VAL A 209 TRP A 210 HOH A 291 SITE 1 AC4 16 LEU B 10 SER B 12 GLY B 14 LYS B 15 SITE 2 AC4 16 ASP B 16 SER B 17 VAL B 35 MSE B 37 SITE 3 AC4 16 TYR B 47 HIS B 48 ALA B 96 GLY B 97 SITE 4 AC4 16 GLN B 104 HOH B 238 HOH B 246 HOH B 283 SITE 1 AC5 6 GLU B 42 HIS B 48 THR B 49 ILE B 50 SITE 2 AC5 6 GLU B 188 LYS B 218 CRYST1 58.979 64.072 140.134 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016955 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015607 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007136 0.00000