HEADER LIGASE 19-APR-11 3RL6 TITLE CRYSTAL STRUCTURE OF THE ARCHAEAL ASPARAGINE SYNTHETASE A COMPLEXED TITLE 2 WITH L-ASPARAGINE AND ADENOSINE MONOPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARCHAEAL ASPARAGINE SYNTHETASE A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ASNS-LIKE ASPARAGINYL-TRNA SYNTHETASE RELATED PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS ABYSSI; SOURCE 3 ORGANISM_TAXID: 272844; SOURCE 4 STRAIN: GE5/ORSAY; SOURCE 5 GENE: ASNS-LIKE, PYRAB02460, PAB2356; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMP AND ASN BINDING, SEVEN STRANDED ANTIPARALLEL BETA-SHEET, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR M.BLAISE,M.FRECHIN,C.CHARRON,H.ROY,C.SAUTER,B.LORBER,V.OLIERIC,D.KERN REVDAT 3 28-FEB-24 3RL6 1 REMARK LINK REVDAT 2 21-SEP-11 3RL6 1 JRNL REVDAT 1 17-AUG-11 3RL6 0 JRNL AUTH M.BLAISE,M.FRECHIN,V.OLIERIC,C.CHARRON,C.SAUTER,B.LORBER, JRNL AUTH 2 H.ROY,D.KERN JRNL TITL CRYSTAL STRUCTURE OF THE ARCHAEAL ASPARAGINE SYNTHETASE: JRNL TITL 2 INTERRELATION WITH ASPARTYL-TRNA AND ASPARAGINYL-TRNA JRNL TITL 3 SYNTHETASES. JRNL REF J.MOL.BIOL. V. 412 437 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21820443 JRNL DOI 10.1016/J.JMB.2011.07.050 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 37791 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8889 - 4.8188 0.91 2554 145 0.1666 0.1844 REMARK 3 2 4.8188 - 3.8253 0.96 2545 142 0.1406 0.2027 REMARK 3 3 3.8253 - 3.3419 0.97 2550 142 0.1529 0.2105 REMARK 3 4 3.3419 - 3.0364 0.98 2546 140 0.1711 0.2348 REMARK 3 5 3.0364 - 2.8188 0.99 2553 143 0.1740 0.2127 REMARK 3 6 2.8188 - 2.6526 0.99 2581 141 0.1634 0.2422 REMARK 3 7 2.6526 - 2.5198 1.00 2569 143 0.1771 0.2101 REMARK 3 8 2.5198 - 2.4101 1.00 2581 137 0.1764 0.2309 REMARK 3 9 2.4101 - 2.3173 1.00 2558 152 0.1700 0.2270 REMARK 3 10 2.3173 - 2.2374 1.00 2540 138 0.1785 0.1986 REMARK 3 11 2.2374 - 2.1674 1.00 2534 145 0.1814 0.2474 REMARK 3 12 2.1674 - 2.1055 1.00 2563 132 0.2000 0.2650 REMARK 3 13 2.1055 - 2.0500 1.00 2568 153 0.2039 0.2675 REMARK 3 14 2.0500 - 2.0000 1.00 2560 136 0.2130 0.2833 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 31.41 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.95040 REMARK 3 B22 (A**2) : -0.76640 REMARK 3 B33 (A**2) : 6.33820 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4931 REMARK 3 ANGLE : 1.022 6655 REMARK 3 CHIRALITY : 0.075 694 REMARK 3 PLANARITY : 0.004 851 REMARK 3 DIHEDRAL : 13.558 1881 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 1:32) REMARK 3 ORIGIN FOR THE GROUP (A): -21.7967 6.8591 25.1055 REMARK 3 T TENSOR REMARK 3 T11: 0.0371 T22: 0.0640 REMARK 3 T33: 0.0705 T12: -0.0215 REMARK 3 T13: 0.0472 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 0.0651 L22: 0.0102 REMARK 3 L33: 0.1005 L12: -0.0028 REMARK 3 L13: -0.0192 L23: -0.0147 REMARK 3 S TENSOR REMARK 3 S11: 0.0184 S12: -0.0057 S13: 0.0277 REMARK 3 S21: 0.0388 S22: 0.0146 S23: 0.0063 REMARK 3 S31: -0.0347 S32: -0.0156 S33: 0.0027 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 33:52) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4314 -3.6200 6.8909 REMARK 3 T TENSOR REMARK 3 T11: 0.0369 T22: 0.0325 REMARK 3 T33: 0.0442 T12: -0.0009 REMARK 3 T13: 0.0109 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 0.0325 L22: 0.0307 REMARK 3 L33: 0.1142 L12: -0.0288 REMARK 3 L13: -0.0040 L23: -0.0218 REMARK 3 S TENSOR REMARK 3 S11: -0.0128 S12: 0.0496 S13: 0.0175 REMARK 3 S21: -0.0256 S22: -0.0312 S23: -0.0346 REMARK 3 S31: 0.0511 S32: 0.0034 S33: 0.0200 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 53:85) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5740 -4.7905 5.2118 REMARK 3 T TENSOR REMARK 3 T11: 0.0348 T22: 0.0266 REMARK 3 T33: 0.1319 T12: 0.0226 REMARK 3 T13: 0.0079 T23: 0.0436 REMARK 3 L TENSOR REMARK 3 L11: 0.0114 L22: 0.0525 REMARK 3 L33: 0.0814 L12: -0.0158 REMARK 3 L13: -0.0123 L23: -0.0247 REMARK 3 S TENSOR REMARK 3 S11: -0.0334 S12: -0.0208 S13: -0.0140 REMARK 3 S21: 0.0004 S22: -0.0230 S23: -0.0708 REMARK 3 S31: 0.0249 S32: 0.0556 S33: -0.0516 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 86:148) REMARK 3 ORIGIN FOR THE GROUP (A): -23.4025 6.2758 10.7801 REMARK 3 T TENSOR REMARK 3 T11: -0.0498 T22: -0.0355 REMARK 3 T33: 0.0383 T12: 0.0025 REMARK 3 T13: 0.0163 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.0135 L22: 0.0336 REMARK 3 L33: 0.0138 L12: -0.0174 REMARK 3 L13: 0.0032 L23: -0.0036 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: 0.0044 S13: 0.0245 REMARK 3 S21: 0.0091 S22: -0.0138 S23: -0.0125 REMARK 3 S31: -0.0127 S32: -0.0086 S33: -0.0619 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 149:169) REMARK 3 ORIGIN FOR THE GROUP (A): -27.3368 20.7631 5.2017 REMARK 3 T TENSOR REMARK 3 T11: 0.0548 T22: 0.0295 REMARK 3 T33: 0.1011 T12: 0.0211 REMARK 3 T13: 0.0042 T23: 0.0276 REMARK 3 L TENSOR REMARK 3 L11: 0.0526 L22: 0.0724 REMARK 3 L33: 0.0174 L12: -0.0589 REMARK 3 L13: 0.0115 L23: -0.0015 REMARK 3 S TENSOR REMARK 3 S11: -0.0040 S12: 0.0104 S13: 0.0353 REMARK 3 S21: -0.0108 S22: 0.0020 S23: -0.0326 REMARK 3 S31: -0.0198 S32: 0.0022 S33: 0.0103 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 170:213) REMARK 3 ORIGIN FOR THE GROUP (A): -21.3864 15.1632 0.8597 REMARK 3 T TENSOR REMARK 3 T11: -0.0173 T22: -0.0210 REMARK 3 T33: 0.0480 T12: 0.0253 REMARK 3 T13: -0.0302 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 0.0654 L22: 0.0179 REMARK 3 L33: 0.0425 L12: -0.0294 REMARK 3 L13: 0.0257 L23: -0.0194 REMARK 3 S TENSOR REMARK 3 S11: -0.0275 S12: -0.0077 S13: 0.0713 REMARK 3 S21: 0.0047 S22: -0.0121 S23: -0.0221 REMARK 3 S31: -0.0288 S32: 0.0109 S33: -0.1115 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 214:294) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4097 2.0731 4.5108 REMARK 3 T TENSOR REMARK 3 T11: 0.0085 T22: -0.0126 REMARK 3 T33: 0.0031 T12: 0.0058 REMARK 3 T13: 0.0038 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.0308 L22: 0.0609 REMARK 3 L33: 0.0334 L12: -0.0027 REMARK 3 L13: 0.0111 L23: -0.0377 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: 0.0023 S13: 0.0090 REMARK 3 S21: -0.0355 S22: -0.0199 S23: -0.0315 REMARK 3 S31: 0.0243 S32: 0.0127 S33: -0.0942 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 1:85) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8447 -7.7646 20.7817 REMARK 3 T TENSOR REMARK 3 T11: 0.0617 T22: 0.0248 REMARK 3 T33: 0.0255 T12: -0.0430 REMARK 3 T13: 0.0222 T23: 0.0600 REMARK 3 L TENSOR REMARK 3 L11: 0.0536 L22: 0.0928 REMARK 3 L33: 0.1332 L12: 0.0333 REMARK 3 L13: -0.0477 L23: -0.0951 REMARK 3 S TENSOR REMARK 3 S11: -0.0413 S12: -0.0347 S13: -0.0346 REMARK 3 S21: 0.0180 S22: -0.0486 S23: -0.0866 REMARK 3 S31: 0.0576 S32: 0.0860 S33: -0.2127 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 86:148) REMARK 3 ORIGIN FOR THE GROUP (A): -20.6101 -13.4798 28.2504 REMARK 3 T TENSOR REMARK 3 T11: 0.1509 T22: 0.0721 REMARK 3 T33: -0.0447 T12: -0.0394 REMARK 3 T13: 0.0911 T23: 0.0702 REMARK 3 L TENSOR REMARK 3 L11: 0.0558 L22: 0.0240 REMARK 3 L33: 0.0162 L12: 0.0375 REMARK 3 L13: 0.0225 L23: 0.0060 REMARK 3 S TENSOR REMARK 3 S11: -0.0105 S12: -0.0585 S13: -0.0283 REMARK 3 S21: 0.0258 S22: -0.0267 S23: -0.0226 REMARK 3 S31: 0.0921 S32: 0.0003 S33: -0.0255 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 149:197) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2493 -25.5203 35.7862 REMARK 3 T TENSOR REMARK 3 T11: 0.2501 T22: 0.1554 REMARK 3 T33: 0.1129 T12: -0.0318 REMARK 3 T13: -0.0088 T23: 0.1420 REMARK 3 L TENSOR REMARK 3 L11: 0.0432 L22: 0.0059 REMARK 3 L33: 0.0655 L12: -0.0095 REMARK 3 L13: 0.0296 L23: 0.0018 REMARK 3 S TENSOR REMARK 3 S11: -0.0229 S12: -0.0164 S13: -0.0205 REMARK 3 S21: 0.0306 S22: -0.0135 S23: -0.0197 REMARK 3 S31: 0.0393 S32: 0.0181 S33: -0.0976 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 198:294) REMARK 3 ORIGIN FOR THE GROUP (A): -11.0999 -13.4413 30.2997 REMARK 3 T TENSOR REMARK 3 T11: 0.1699 T22: 0.1299 REMARK 3 T33: 0.0450 T12: -0.0532 REMARK 3 T13: -0.0340 T23: 0.1942 REMARK 3 L TENSOR REMARK 3 L11: 0.0894 L22: 0.1376 REMARK 3 L33: 0.1996 L12: 0.0862 REMARK 3 L13: -0.0066 L23: -0.0163 REMARK 3 S TENSOR REMARK 3 S11: -0.0056 S12: -0.1370 S13: -0.0394 REMARK 3 S21: 0.0626 S22: -0.1433 S23: -0.1625 REMARK 3 S31: 0.0421 S32: 0.1759 S33: -0.3294 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RL6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000065068. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37794 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 50.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS-HCL PH7, 0.2M NACL, 32% REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.36500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.46000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.46000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.36500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP B 50 REMARK 465 PRO B 51 REMARK 465 ASP B 52 REMARK 465 PRO B 53 REMARK 465 ALA B 54 REMARK 465 GLY B 55 REMARK 465 GLU B 56 REMARK 465 GLY B 57 REMARK 465 ILE B 58 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 49 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 52 116.94 -172.87 REMARK 500 GLU A 89 -59.17 73.36 REMARK 500 ASN A 188 64.55 65.99 REMARK 500 ARG A 191 -130.31 -152.21 REMARK 500 GLU B 89 -65.20 77.11 REMARK 500 ARG B 191 -131.61 -140.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 297 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 215 OE2 REMARK 620 2 SER A 218 OG 89.3 REMARK 620 3 AMP A 296 O1P 90.4 136.3 REMARK 620 4 AMP A 296 O2P 108.0 79.3 59.4 REMARK 620 5 HOH A 515 O 89.5 85.3 138.4 156.3 REMARK 620 6 HOH A 516 O 163.0 75.5 105.8 77.0 81.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASN A 295 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP A 296 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 297 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASN B 295 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP B 296 DBREF 3RL6 A 1 294 UNP Q9V228 Q9V228_PYRAB 1 294 DBREF 3RL6 B 1 294 UNP Q9V228 Q9V228_PYRAB 1 294 SEQRES 1 A 294 MET ASN ALA VAL GLU ILE ILE SER ARG ASP ILE TYR LYS SEQRES 2 A 294 ALA ILE ASP ILE GLN THR LYS ILE LEU ASP TYR MET THR SEQRES 3 A 294 LYS PHE PHE THR ASP ARG GLY PHE LYS TRP LEU LEU PRO SEQRES 4 A 294 ILE MET LEU SER PRO ILE THR ASP PRO LEU TRP PRO ASP SEQRES 5 A 294 PRO ALA GLY GLU GLY ILE ARG PRO ALA GLU VAL ASP VAL SEQRES 6 A 294 TYR GLY VAL ARG MET ARG LEU THR HIS SER MET ILE LEU SEQRES 7 A 294 HIS LYS GLN LEU ALA ILE ALA MET GLY LEU GLU LYS ILE SEQRES 8 A 294 PHE VAL LEU SER PRO ASN ILE ARG LEU GLU SER ARG ARG SEQRES 9 A 294 LYS ASP ASP GLY ARG HIS SER TYR GLU PHE THR GLN LEU SEQRES 10 A 294 ASP PHE GLU ILE GLU GLY ALA LYS MET LYS ASP VAL MET SEQRES 11 A 294 ARG LEU ILE GLU GLU LEU ILE TYR GLY LEU PHE ARG LYS SEQRES 12 A 294 ALA GLU GLU TRP THR GLY ARG GLU PHE PRO ARG ALA ARG SEQRES 13 A 294 HIS PHE LYS VAL TYR ASP TYR LYS ASP ILE LEU GLU GLU SEQRES 14 A 294 PHE GLY SER ASP GLU LYS ALA SER MET GLU MET GLU GLU SEQRES 15 A 294 PRO PHE TRP ILE VAL ASN ILE PRO ARG GLU PHE TYR ASP SEQRES 16 A 294 ARG GLU GLU ASN GLY VAL TRP LYS ASN TYR ASP LEU ILE SEQRES 17 A 294 LEU PRO TYR GLY TYR GLY GLU VAL SER SER GLY GLY GLU SEQRES 18 A 294 ARG GLU TRP GLU TYR GLU LYS ILE VAL ALA LYS ILE ARG SEQRES 19 A 294 ALA ALA GLY LEU LYS GLU ASP SER PHE ARG PRO TYR LEU SEQRES 20 A 294 GLU ILE ALA ARG ALA GLY LYS LEU LYS PRO SER ALA GLY SEQRES 21 A 294 ALA GLY ILE GLY VAL GLU ARG LEU VAL ARG PHE ILE VAL SEQRES 22 A 294 GLY ALA LYS HIS ILE ALA GLU VAL GLN PRO PHE PRO ARG SEQRES 23 A 294 VAL PRO GLY ILE PRO ALA VAL ILE SEQRES 1 B 294 MET ASN ALA VAL GLU ILE ILE SER ARG ASP ILE TYR LYS SEQRES 2 B 294 ALA ILE ASP ILE GLN THR LYS ILE LEU ASP TYR MET THR SEQRES 3 B 294 LYS PHE PHE THR ASP ARG GLY PHE LYS TRP LEU LEU PRO SEQRES 4 B 294 ILE MET LEU SER PRO ILE THR ASP PRO LEU TRP PRO ASP SEQRES 5 B 294 PRO ALA GLY GLU GLY ILE ARG PRO ALA GLU VAL ASP VAL SEQRES 6 B 294 TYR GLY VAL ARG MET ARG LEU THR HIS SER MET ILE LEU SEQRES 7 B 294 HIS LYS GLN LEU ALA ILE ALA MET GLY LEU GLU LYS ILE SEQRES 8 B 294 PHE VAL LEU SER PRO ASN ILE ARG LEU GLU SER ARG ARG SEQRES 9 B 294 LYS ASP ASP GLY ARG HIS SER TYR GLU PHE THR GLN LEU SEQRES 10 B 294 ASP PHE GLU ILE GLU GLY ALA LYS MET LYS ASP VAL MET SEQRES 11 B 294 ARG LEU ILE GLU GLU LEU ILE TYR GLY LEU PHE ARG LYS SEQRES 12 B 294 ALA GLU GLU TRP THR GLY ARG GLU PHE PRO ARG ALA ARG SEQRES 13 B 294 HIS PHE LYS VAL TYR ASP TYR LYS ASP ILE LEU GLU GLU SEQRES 14 B 294 PHE GLY SER ASP GLU LYS ALA SER MET GLU MET GLU GLU SEQRES 15 B 294 PRO PHE TRP ILE VAL ASN ILE PRO ARG GLU PHE TYR ASP SEQRES 16 B 294 ARG GLU GLU ASN GLY VAL TRP LYS ASN TYR ASP LEU ILE SEQRES 17 B 294 LEU PRO TYR GLY TYR GLY GLU VAL SER SER GLY GLY GLU SEQRES 18 B 294 ARG GLU TRP GLU TYR GLU LYS ILE VAL ALA LYS ILE ARG SEQRES 19 B 294 ALA ALA GLY LEU LYS GLU ASP SER PHE ARG PRO TYR LEU SEQRES 20 B 294 GLU ILE ALA ARG ALA GLY LYS LEU LYS PRO SER ALA GLY SEQRES 21 B 294 ALA GLY ILE GLY VAL GLU ARG LEU VAL ARG PHE ILE VAL SEQRES 22 B 294 GLY ALA LYS HIS ILE ALA GLU VAL GLN PRO PHE PRO ARG SEQRES 23 B 294 VAL PRO GLY ILE PRO ALA VAL ILE HET ASN A 295 9 HET AMP A 296 23 HET MG A 297 1 HET ASN B 295 9 HET AMP B 296 23 HETNAM ASN ASPARAGINE HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 ASN 2(C4 H8 N2 O3) FORMUL 4 AMP 2(C10 H14 N5 O7 P) FORMUL 5 MG MG 2+ FORMUL 8 HOH *334(H2 O) HELIX 1 1 ASN A 2 ARG A 9 1 8 HELIX 2 2 ILE A 11 ASP A 31 1 21 HELIX 3 3 MET A 76 MET A 86 1 11 HELIX 4 4 SER A 102 ASP A 106 5 5 HELIX 5 5 LYS A 125 GLY A 149 1 25 HELIX 6 6 TYR A 163 PHE A 170 1 8 HELIX 7 7 SER A 172 MET A 180 1 9 HELIX 8 8 GLU A 225 ALA A 236 1 12 HELIX 9 9 LYS A 239 SER A 242 5 4 HELIX 10 10 PHE A 243 ALA A 252 1 10 HELIX 11 11 VAL A 265 GLY A 274 1 10 HELIX 12 12 HIS A 277 GLN A 282 5 6 HELIX 13 13 ASN B 2 ARG B 9 1 8 HELIX 14 14 ILE B 11 ASP B 31 1 21 HELIX 15 15 MET B 76 MET B 86 1 11 HELIX 16 16 SER B 102 ASP B 106 5 5 HELIX 17 17 LYS B 125 GLY B 149 1 25 HELIX 18 18 TYR B 163 GLY B 171 1 9 HELIX 19 19 SER B 172 MET B 180 1 9 HELIX 20 20 GLU B 225 ALA B 236 1 12 HELIX 21 21 LYS B 239 SER B 242 5 4 HELIX 22 22 PHE B 243 ALA B 252 1 10 HELIX 23 23 VAL B 265 GLY B 274 1 10 HELIX 24 24 HIS B 277 GLN B 282 5 6 SHEET 1 A 8 LYS A 35 LEU A 37 0 SHEET 2 A 8 LYS A 90 ILE A 98 1 O PHE A 92 N LEU A 37 SHEET 3 A 8 GLU A 113 GLU A 122 -1 O PHE A 114 N ASN A 97 SHEET 4 A 8 SER A 258 GLY A 264 -1 O ALA A 261 N PHE A 119 SHEET 5 A 8 GLY A 214 GLU A 221 -1 N VAL A 216 O GLY A 264 SHEET 6 A 8 ASN A 204 LEU A 209 -1 N LEU A 207 O VAL A 216 SHEET 7 A 8 PHE A 184 VAL A 187 -1 N PHE A 184 O ILE A 208 SHEET 8 A 8 LYS A 159 ASP A 162 1 N LYS A 159 O TRP A 185 SHEET 1 B 3 LEU A 42 SER A 43 0 SHEET 2 B 3 VAL A 68 LEU A 72 -1 O ARG A 71 N SER A 43 SHEET 3 B 3 GLU A 62 VAL A 65 -1 N VAL A 65 O VAL A 68 SHEET 1 C 2 GLU A 197 GLU A 198 0 SHEET 2 C 2 VAL A 201 TRP A 202 -1 O VAL A 201 N GLU A 198 SHEET 1 D 8 LYS B 35 LEU B 37 0 SHEET 2 D 8 LYS B 90 ILE B 98 1 O LYS B 90 N LYS B 35 SHEET 3 D 8 GLU B 113 GLU B 122 -1 O PHE B 114 N ASN B 97 SHEET 4 D 8 SER B 258 GLY B 264 -1 O ALA B 261 N PHE B 119 SHEET 5 D 8 GLY B 214 GLU B 221 -1 N VAL B 216 O GLY B 264 SHEET 6 D 8 ASN B 204 LEU B 209 -1 N TYR B 205 O GLY B 219 SHEET 7 D 8 PHE B 184 VAL B 187 -1 N PHE B 184 O ILE B 208 SHEET 8 D 8 LYS B 159 ASP B 162 1 N LYS B 159 O TRP B 185 SHEET 1 E 3 LEU B 42 SER B 43 0 SHEET 2 E 3 VAL B 68 LEU B 72 -1 O ARG B 71 N SER B 43 SHEET 3 E 3 GLU B 62 VAL B 65 -1 N VAL B 65 O VAL B 68 SHEET 1 F 2 GLU B 197 GLU B 198 0 SHEET 2 F 2 VAL B 201 TRP B 202 -1 O VAL B 201 N GLU B 198 LINK OE2 GLU A 215 MG MG A 297 1555 1555 2.52 LINK OG SER A 218 MG MG A 297 1555 1555 2.91 LINK O1P AMP A 296 MG MG A 297 1555 1555 2.58 LINK O2P AMP A 296 MG MG A 297 1555 1555 2.66 LINK MG MG A 297 O HOH A 515 1555 1555 2.63 LINK MG MG A 297 O HOH A 516 1555 1555 2.31 CISPEP 1 TRP A 50 PRO A 51 0 -8.21 SITE 1 AC1 16 ASP A 47 SER A 75 LYS A 80 ARG A 99 SITE 2 AC1 16 GLN A 116 ASP A 118 TYR A 194 SER A 218 SITE 3 AC1 16 GLY A 219 ARG A 222 ALA A 261 GLY A 262 SITE 4 AC1 16 AMP A 296 HOH A 356 HOH A 511 HOH A 512 SITE 1 AC2 17 ARG A 99 GLU A 101 ARG A 109 HIS A 110 SITE 2 AC2 17 SER A 111 PHE A 114 GLN A 116 GLU A 215 SITE 3 AC2 17 VAL A 216 SER A 217 SER A 218 GLY A 264 SITE 4 AC2 17 ARG A 267 ASN A 295 MG A 297 HOH A 298 SITE 5 AC2 17 HOH A 441 SITE 1 AC3 5 GLU A 215 SER A 218 AMP A 296 HOH A 515 SITE 2 AC3 5 HOH A 516 SITE 1 AC4 14 ASP B 47 SER B 75 LYS B 80 ARG B 99 SITE 2 AC4 14 GLN B 116 ASP B 118 SER B 218 GLY B 219 SITE 3 AC4 14 ARG B 222 ALA B 261 GLY B 262 AMP B 296 SITE 4 AC4 14 HOH B 344 HOH B 382 SITE 1 AC5 11 ARG B 99 HIS B 110 SER B 111 PHE B 114 SITE 2 AC5 11 GLN B 116 GLU B 215 ARG B 267 ILE B 278 SITE 3 AC5 11 ASN B 295 HOH B 313 HOH B 383 CRYST1 58.730 60.900 154.920 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017027 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006455 0.00000