HEADER TRANSCRIPTION REGULATOR 26-APR-11 3RPJ TITLE STRUCTURE OF A CURLIN GENES TRANSCRIPTIONAL REGULATOR PROTEIN FROM TITLE 2 PROTEUS MIRABILIS HI4320. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CURLIN GENES TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: TARGETED DOMAIN 2-131; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PROTEUS MIRABILIS; SOURCE 3 ORGANISM_TAXID: 529507; SOURCE 4 STRAIN: HI4320; SOURCE 5 GENE: CRL, PMI0368; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19B KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, TRANSCRIPTIONAL REGULATOR, TRANSCRIPTION REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR M.E.CUFF,R.WU,B.FELDMANN,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 2 08-NOV-17 3RPJ 1 REMARK REVDAT 1 31-AUG-11 3RPJ 0 JRNL AUTH M.E.CUFF,R.WU,B.FELDMANN,A.JOACHIMIAK JRNL TITL STRUCTURE OF A CURLIN GENES TRANSCRIPTIONAL REGULATOR JRNL TITL 2 PROTEIN FROM PROTEUS MIRABILIS HI4320. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 27125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1364 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1863 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2089 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 61 REMARK 3 SOLVENT ATOMS : 120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.52000 REMARK 3 B22 (A**2) : 1.07000 REMARK 3 B33 (A**2) : -3.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.081 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.203 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2193 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1520 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2955 ; 1.339 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3674 ; 0.859 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 249 ; 5.559 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;38.459 ;24.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 368 ;14.276 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;21.282 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 305 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2369 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 459 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1259 ; 0.888 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 502 ; 0.228 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2036 ; 1.703 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 934 ; 2.533 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 919 ; 4.188 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): 50.2069 30.4517 2.9199 REMARK 3 T TENSOR REMARK 3 T11: 0.0501 T22: 0.0748 REMARK 3 T33: 0.0658 T12: 0.0038 REMARK 3 T13: -0.0095 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.4644 L22: 1.6209 REMARK 3 L33: 6.0739 L12: 0.0961 REMARK 3 L13: 1.3507 L23: 1.1640 REMARK 3 S TENSOR REMARK 3 S11: -0.0708 S12: 0.0873 S13: 0.1122 REMARK 3 S21: 0.1546 S22: 0.0766 S23: -0.1607 REMARK 3 S31: -0.1745 S32: 0.5316 S33: -0.0058 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 131 REMARK 3 ORIGIN FOR THE GROUP (A): 58.7549 14.5632 25.7297 REMARK 3 T TENSOR REMARK 3 T11: 0.1307 T22: 0.1211 REMARK 3 T33: 0.0072 T12: 0.0531 REMARK 3 T13: -0.0004 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 1.5699 L22: 3.3676 REMARK 3 L33: 2.7669 L12: -0.9919 REMARK 3 L13: -0.5535 L23: 0.0927 REMARK 3 S TENSOR REMARK 3 S11: -0.2455 S12: -0.2907 S13: -0.0097 REMARK 3 S21: 0.5771 S22: 0.2212 S23: 0.0493 REMARK 3 S31: -0.1752 S32: -0.1297 S33: 0.0244 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 3RPJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065218. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97904 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27263 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 0.57900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: MLPHARE, DM 6.0, HKL-3000, SHELXD, SOLVE, RESOLVE, REMARK 200 CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PROPANE, 2.0M AMMONIUM REMARK 280 SULFATE, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.19000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.08150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.97600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.08150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.19000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.97600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: LIKELY DIMER IN AU REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 100.76000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 38.97600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 43.08150 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -25.19000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 38.97600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 GLN A 29 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 LEU B 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 GLU A 49 CG CD OE1 OE2 REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 GLU B 30 CG CD OE1 OE2 REMARK 470 LYS B 78 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 EDO B 134 O HOH B 180 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 84 47.87 -77.22 REMARK 500 TYR B 22 -51.37 -123.29 REMARK 500 ASN B 43 106.74 -163.51 REMARK 500 ASN B 84 46.14 -76.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 134 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 133 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 135 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 136 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 134 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 137 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 138 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 139 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 140 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 135 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 141 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC102117 RELATED DB: TARGETDB DBREF 3RPJ A 1 131 UNP B4EUU9 B4EUU9_PROMH 1 131 DBREF 3RPJ B 1 131 UNP B4EUU9 B4EUU9_PROMH 1 131 SEQADV 3RPJ SER A -2 UNP B4EUU9 EXPRESSION TAG SEQADV 3RPJ ASN A -1 UNP B4EUU9 EXPRESSION TAG SEQADV 3RPJ ALA A 0 UNP B4EUU9 EXPRESSION TAG SEQADV 3RPJ SER B -2 UNP B4EUU9 EXPRESSION TAG SEQADV 3RPJ ASN B -1 UNP B4EUU9 EXPRESSION TAG SEQADV 3RPJ ALA B 0 UNP B4EUU9 EXPRESSION TAG SEQRES 1 A 134 SER ASN ALA MSE THR SER SER LEU HIS PRO THR ARG GLY SEQRES 2 A 134 LYS LEU LEU LYS ARG PHE ALA GLN ILE GLY PRO TYR ILE SEQRES 3 A 134 ARG GLU GLN GLN CYS GLN GLU SER GLN PHE PHE PHE ASP SEQRES 4 A 134 CYS LEU ALA VAL CYS VAL ASN LYS LYS VAL THR PRO GLU SEQRES 5 A 134 LYS ARG GLU PHE TRP GLY TRP TRP MSE GLU LEU GLU ARG SEQRES 6 A 134 ASN GLY GLU GLN LEU ILE TYR TYR TYR GLN VAL GLY LEU SEQRES 7 A 134 PHE ASP LYS ASN GLY ASP TRP VAL ASN GLN VAL ILE SER SEQRES 8 A 134 LYS LYS ASP VAL ILE GLU SER ILE HIS GLU THR LEU ILE SEQRES 9 A 134 ARG PHE HIS ASP PHE LEU GLN ALA ALA VAL SER GLU LEU SEQRES 10 A 134 GLU MSE THR LEU VAL PRO ASP GLU LYS MSE SER ASN PHE SEQRES 11 A 134 PRO LEU PRO LEU SEQRES 1 B 134 SER ASN ALA MSE THR SER SER LEU HIS PRO THR ARG GLY SEQRES 2 B 134 LYS LEU LEU LYS ARG PHE ALA GLN ILE GLY PRO TYR ILE SEQRES 3 B 134 ARG GLU GLN GLN CYS GLN GLU SER GLN PHE PHE PHE ASP SEQRES 4 B 134 CYS LEU ALA VAL CYS VAL ASN LYS LYS VAL THR PRO GLU SEQRES 5 B 134 LYS ARG GLU PHE TRP GLY TRP TRP MSE GLU LEU GLU ARG SEQRES 6 B 134 ASN GLY GLU GLN LEU ILE TYR TYR TYR GLN VAL GLY LEU SEQRES 7 B 134 PHE ASP LYS ASN GLY ASP TRP VAL ASN GLN VAL ILE SER SEQRES 8 B 134 LYS LYS ASP VAL ILE GLU SER ILE HIS GLU THR LEU ILE SEQRES 9 B 134 ARG PHE HIS ASP PHE LEU GLN ALA ALA VAL SER GLU LEU SEQRES 10 B 134 GLU MSE THR LEU VAL PRO ASP GLU LYS MSE SER ASN PHE SEQRES 11 B 134 PRO LEU PRO LEU MODRES 3RPJ MSE A 58 MET SELENOMETHIONINE MODRES 3RPJ MSE A 116 MET SELENOMETHIONINE MODRES 3RPJ MSE A 124 MET SELENOMETHIONINE MODRES 3RPJ MSE B 58 MET SELENOMETHIONINE MODRES 3RPJ MSE B 116 MET SELENOMETHIONINE MODRES 3RPJ MSE B 124 MET SELENOMETHIONINE HET MSE A 58 8 HET MSE A 116 8 HET MSE A 124 8 HET MSE B 58 8 HET MSE B 116 8 HET MSE B 124 8 HET SO4 A 132 5 HET SO4 A 133 5 HET SO4 A 134 5 HET EDO A 135 4 HET EDO A 136 4 HET EDO A 137 4 HET EDO A 138 4 HET EDO A 139 4 HET EDO A 140 4 HET EDO A 141 4 HET SO4 B 132 5 HET SO4 B 133 5 HET EDO B 134 4 HET EDO B 135 4 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 SO4 5(O4 S 2-) FORMUL 6 EDO 9(C2 H6 O2) FORMUL 17 HOH *120(H2 O) HELIX 1 1 THR A 8 GLN A 18 1 11 HELIX 2 2 ARG A 24 CYS A 28 5 5 HELIX 3 3 LYS A 89 LEU A 114 1 26 HELIX 4 4 GLU A 122 PHE A 127 5 6 HELIX 5 5 THR B 8 GLN B 18 1 11 HELIX 6 6 ARG B 24 CYS B 28 5 5 HELIX 7 7 THR B 47 ARG B 51 5 5 HELIX 8 8 LYS B 89 LEU B 114 1 26 HELIX 9 9 GLU B 122 PHE B 127 5 6 SHEET 1 A 4 GLN A 32 CYS A 41 0 SHEET 2 A 4 PHE A 53 ASN A 63 -1 O TRP A 54 N VAL A 40 SHEET 3 A 4 GLN A 66 PHE A 76 -1 O PHE A 76 N PHE A 53 SHEET 4 A 4 TRP A 82 VAL A 83 -1 O VAL A 83 N LEU A 75 SHEET 1 B 4 GLN A 32 CYS A 41 0 SHEET 2 B 4 PHE A 53 ASN A 63 -1 O TRP A 54 N VAL A 40 SHEET 3 B 4 GLN A 66 PHE A 76 -1 O PHE A 76 N PHE A 53 SHEET 4 B 4 THR A 117 PRO A 120 1 O THR A 117 N LEU A 67 SHEET 1 C 4 GLN B 32 CYS B 41 0 SHEET 2 C 4 PHE B 53 ASN B 63 -1 O TRP B 54 N VAL B 40 SHEET 3 C 4 GLN B 66 PHE B 76 -1 O GLN B 66 N ASN B 63 SHEET 4 C 4 TRP B 82 VAL B 83 -1 O VAL B 83 N LEU B 75 SHEET 1 D 4 GLN B 32 CYS B 41 0 SHEET 2 D 4 PHE B 53 ASN B 63 -1 O TRP B 54 N VAL B 40 SHEET 3 D 4 GLN B 66 PHE B 76 -1 O GLN B 66 N ASN B 63 SHEET 4 D 4 THR B 117 PRO B 120 1 O THR B 117 N LEU B 67 LINK C TRP A 57 N MSE A 58 1555 1555 1.33 LINK C MSE A 58 N GLU A 59 1555 1555 1.32 LINK C GLU A 115 N MSE A 116 1555 1555 1.32 LINK C MSE A 116 N THR A 117 1555 1555 1.33 LINK C LYS A 123 N MSE A 124 1555 1555 1.32 LINK C MSE A 124 N SER A 125 1555 1555 1.33 LINK C TRP B 57 N MSE B 58 1555 1555 1.33 LINK C MSE B 58 N GLU B 59 1555 1555 1.33 LINK C GLU B 115 N MSE B 116 1555 1555 1.32 LINK C MSE B 116 N THR B 117 1555 1555 1.33 LINK C LYS B 123 N MSE B 124 1555 1555 1.34 LINK C MSE B 124 N SER B 125 1555 1555 1.33 CISPEP 1 HIS A 6 PRO A 7 0 0.87 CISPEP 2 HIS B 6 PRO B 7 0 -9.63 SITE 1 AC1 4 SER A 112 HOH A 187 HOH A 198 ARG B 51 SITE 1 AC2 4 LYS A 89 EDO A 136 HOH A 197 ASN B 84 SITE 1 AC3 4 ARG A 24 GLU A 25 GLN A 26 HOH A 182 SITE 1 AC4 5 HOH A 192 ARG B 24 GLU B 25 GLN B 26 SITE 2 AC4 5 HOH B 183 SITE 1 AC5 4 ASN A 84 HOH A 191 ILE B 87 LYS B 89 SITE 1 AC6 6 TYR A 70 GLN A 72 ASN A 84 HOH A 142 SITE 2 AC6 6 SER B 88 LYS B 89 SITE 1 AC7 7 VAL A 42 TRP A 54 ILE A 87 LYS A 89 SITE 2 AC7 7 VAL A 92 SO4 A 133 HOH A 153 SITE 1 AC8 7 SER A 88 HOH A 148 TYR B 70 TYR B 71 SITE 2 AC8 7 ASN B 126 PHE B 127 HOH B 180 SITE 1 AC9 2 CYS A 41 LYS A 44 SITE 1 BC1 4 ILE A 19 TYR A 22 PHE A 106 PRO B 130 SITE 1 BC2 5 TRP A 57 GLU A 59 GLN A 72 EDO A 140 SITE 2 BC2 5 HOH A 174 SITE 1 BC3 5 PHE A 34 ASP A 81 TRP A 82 EDO A 139 SITE 2 BC3 5 HOH A 195 SITE 1 BC4 6 EDO A 141 ILE B 101 HIS B 104 ASP B 105 SITE 2 BC4 6 GLN B 108 LEU B 131 SITE 1 BC5 2 PHE A 106 EDO B 135 CRYST1 50.380 77.952 86.163 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019849 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012828 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011606 0.00000