HEADER HYDROLASE 27-APR-11 3RQ0 TITLE THE CRYSTAL STRUCTURE OF A GLYCOSYL HYDROLASES (GH) FAMILY PROTEIN 16 TITLE 2 FROM MYCOBACTERIUM SMEGMATIS STR. MC2 155 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSYL HYDROLASES FAMILY PROTEIN 16; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS; SOURCE 3 ORGANISM_TAXID: 246196; SOURCE 4 STRAIN: MC2 155; SOURCE 5 GENE: MSMEG_5345; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE) MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,G.CHHOR,J.BEARDEN,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 2 09-OCT-24 3RQ0 1 REMARK SEQADV LINK REVDAT 1 11-MAY-11 3RQ0 0 JRNL AUTH K.TAN,G.CHHOR,J.BEARDEN,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A GLYCOSYL HYDROLASES (GH) FAMILY JRNL TITL 2 PROTEIN 16 FROM MYCOBACTERIUM SMEGMATIS STR. MC2 155 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 3 NUMBER OF REFLECTIONS : 23354 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1197 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.5230 - 4.2000 0.95 2764 133 0.1532 0.1621 REMARK 3 2 4.2000 - 3.3341 0.96 2644 134 0.1453 0.1831 REMARK 3 3 3.3341 - 2.9128 0.96 2614 150 0.1561 0.1877 REMARK 3 4 2.9128 - 2.6465 0.94 2546 133 0.1568 0.1897 REMARK 3 5 2.6465 - 2.4569 0.92 2446 156 0.1626 0.2053 REMARK 3 6 2.4569 - 2.3120 0.91 2442 124 0.1740 0.2255 REMARK 3 7 2.3120 - 2.1962 0.88 2362 124 0.1849 0.2207 REMARK 3 8 2.1962 - 2.1006 0.84 2247 116 0.1867 0.2238 REMARK 3 9 2.1006 - 2.0198 0.79 2092 127 0.2067 0.2669 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 40.35 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.36640 REMARK 3 B22 (A**2) : -9.36640 REMARK 3 B33 (A**2) : 18.73280 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1990 REMARK 3 ANGLE : 1.081 2678 REMARK 3 CHIRALITY : 0.083 249 REMARK 3 PLANARITY : 0.004 339 REMARK 3 DIHEDRAL : 13.896 705 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 41.1964 16.9586 13.3747 REMARK 3 T TENSOR REMARK 3 T11: 0.1651 T22: 0.1591 REMARK 3 T33: 0.1766 T12: 0.0028 REMARK 3 T13: 0.0013 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.4856 L22: 0.4906 REMARK 3 L33: 0.6912 L12: -0.3199 REMARK 3 L13: 0.2292 L23: -0.3609 REMARK 3 S TENSOR REMARK 3 S11: 0.0101 S12: 0.0011 S13: 0.0557 REMARK 3 S21: 0.0502 S22: 0.0058 S23: 0.0007 REMARK 3 S31: -0.0163 S32: -0.0037 S33: -0.0072 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RQ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000065235. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24834 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 46.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 9.40 REMARK 200 R MERGE FOR SHELL (I) : 0.68400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, HKL-3000, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA2HPO4:CITRIC ACID, 40% (V/V) REMARK 280 PEG300, PH 4.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.45450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 58.71000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 58.71000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 13.72725 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 58.71000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 58.71000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 41.18175 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 58.71000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.71000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 13.72725 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 58.71000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.71000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 41.18175 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 27.45450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE AUTHOR STATES THAT THE BIOLOGICAL UNIT OF THIS PROTEIN REMARK 300 IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 VAL A 4 REMARK 465 ASP A 5 REMARK 465 ARG A 6 REMARK 465 ARG A 7 REMARK 465 GLN A 8 REMARK 465 MSE A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 LEU A 12 REMARK 465 SER A 13 REMARK 465 GLY A 14 REMARK 465 LEU A 15 REMARK 465 GLY A 16 REMARK 465 ALA A 17 REMARK 465 THR A 18 REMARK 465 ALA A 19 REMARK 465 ALA A 20 REMARK 465 VAL A 21 REMARK 465 LEU A 22 REMARK 465 PRO A 23 REMARK 465 VAL A 24 REMARK 465 PRO A 25 REMARK 465 ARG A 26 REMARK 465 ALA A 27 REMARK 465 ALA A 28 REMARK 465 ALA A 29 REMARK 465 VAL A 30 REMARK 465 PRO A 31 REMARK 465 ASN A 32 REMARK 465 GLN A 33 REMARK 465 THR A 34 REMARK 465 ALA A 35 REMARK 465 ALA A 36 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 94 14.13 80.62 REMARK 500 SER A 109 -157.46 -151.91 REMARK 500 ASN A 131 37.52 -94.69 REMARK 500 CYS A 132 24.64 -146.67 REMARK 500 TRP A 138 75.20 -152.25 REMARK 500 LYS A 171 144.56 80.56 REMARK 500 TRP A 224 105.02 -27.81 REMARK 500 ALA A 242 -148.03 56.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 43 O REMARK 620 2 SER A 94 O 88.3 REMARK 620 3 SER A 94 OG 88.4 78.0 REMARK 620 4 ASP A 261 O 87.4 84.3 161.9 REMARK 620 5 ASP A 261 OD1 163.5 81.5 102.0 78.7 REMARK 620 6 HOH A 308 O 95.6 167.7 90.5 107.5 97.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 267 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 268 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 269 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 270 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 271 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 272 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 273 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 274 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 275 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 276 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 277 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 278 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 279 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 211 A 280 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC100127 RELATED DB: TARGETDB DBREF 3RQ0 A 1 266 UNP A0R351 A0R351_MYCS2 1 266 SEQADV 3RQ0 SER A -2 UNP A0R351 EXPRESSION TAG SEQADV 3RQ0 ASN A -1 UNP A0R351 EXPRESSION TAG SEQADV 3RQ0 ALA A 0 UNP A0R351 EXPRESSION TAG SEQRES 1 A 269 SER ASN ALA MSE ALA ASN VAL ASP ARG ARG GLN MSE LEU SEQRES 2 A 269 LEU LEU SER GLY LEU GLY ALA THR ALA ALA VAL LEU PRO SEQRES 3 A 269 VAL PRO ARG ALA ALA ALA VAL PRO ASN GLN THR ALA ALA SEQRES 4 A 269 SER TYR VAL PHE ALA ASP GLU PHE ASP GLY PRO ALA GLY SEQRES 5 A 269 SER ALA PRO SER ALA ALA LYS TRP THR ILE ALA LYS ALA SEQRES 6 A 269 ARG GLU THR ILE GLN ASP PRO THR TYR TRP GLU GLN PRO SEQRES 7 A 269 GLY ARG ILE GLY GLN TYR ARG ASN ASP ARG ARG ASN VAL SEQRES 8 A 269 PHE LEU ASP GLY LYS SER ASN LEU VAL ILE ARG ALA ALA SEQRES 9 A 269 LYS ASP GLY ASP THR TYR TYR SER ALA LYS LEU ALA SER SEQRES 10 A 269 VAL TRP GLU GLY GLY ALA GLY HIS THR TRP GLU ALA ARG SEQRES 11 A 269 ILE LYS PHE ASN CYS LEU THR ALA GLY ALA TRP PRO ALA SEQRES 12 A 269 PHE TRP LEU GLY ASN THR GLY GLU GLY GLU LEU ASP ILE SEQRES 13 A 269 ILE GLU TRP TYR GLY ASN GLY SER TRP PRO SER ALA THR SEQRES 14 A 269 THR VAL HIS ALA LYS SER ASN GLY GLY GLU TRP LYS THR SEQRES 15 A 269 HIS ASN ILE ALA VAL ASP ASN GLY TRP HIS ARG TRP ARG SEQRES 16 A 269 THR GLN TRP ASP ALA GLU GLY ALA ARG PHE TRP LEU ASP SEQRES 17 A 269 TYR THR ASP GLY ALA GLN PRO TYR PHE GLU VAL ALA ALA SEQRES 18 A 269 SER SER LEU PRO ASP TRP PRO PHE ASP GLN PRO GLY TYR SEQRES 19 A 269 THR MSE PHE VAL VAL LEU ASN LEU ALA VAL ALA GLY SER SEQRES 20 A 269 GLY GLY GLY ASP PRO SER GLY GLY THR TYR PRO ALA ASP SEQRES 21 A 269 MSE LEU VAL ASP TRP VAL ARG VAL TRP MODRES 3RQ0 MSE A 233 MET SELENOMETHIONINE MODRES 3RQ0 MSE A 258 MET SELENOMETHIONINE HET MSE A 233 8 HET MSE A 258 8 HET CA A 301 1 HET PO4 A 267 5 HET PEG A 268 7 HET PEG A 269 7 HET PG4 A 270 13 HET PG4 A 271 13 HET PG4 A 272 13 HET PG4 A 273 13 HET PG4 A 274 13 HET GOL A 275 6 HET GOL A 276 6 HET GOL A 277 6 HET GOL A 278 6 HET GOL A 279 6 HET 211 A 280 10 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION HETNAM PO4 PHOSPHATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM GOL GLYCEROL HETNAM 211 2,2',2''-NITRILOTRIETHANOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 CA CA 2+ FORMUL 3 PO4 O4 P 3- FORMUL 4 PEG 2(C4 H10 O3) FORMUL 6 PG4 5(C8 H18 O5) FORMUL 11 GOL 5(C3 H8 O3) FORMUL 16 211 C6 H15 N O3 FORMUL 17 HOH *186(H2 O) HELIX 1 1 THR A 70 GLN A 74 5 5 HELIX 2 2 SER A 219 LEU A 221 5 3 HELIX 3 3 ALA A 242 GLY A 247 1 6 SHEET 1 A 6 PHE A 40 ASP A 42 0 SHEET 2 A 6 ALA A 256 VAL A 265 -1 O VAL A 265 N PHE A 40 SHEET 3 A 6 HIS A 122 ASN A 131 -1 N GLU A 125 O ARG A 264 SHEET 4 A 6 TRP A 188 ASP A 196 -1 O THR A 193 N TRP A 124 SHEET 5 A 6 GLY A 199 LEU A 204 -1 O ARG A 201 N GLN A 194 SHEET 6 A 6 PHE A 214 ALA A 217 -1 O VAL A 216 N ALA A 200 SHEET 1 B 8 ALA A 256 VAL A 265 0 SHEET 2 B 8 LEU A 96 ASP A 103 -1 N LEU A 96 O VAL A 260 SHEET 3 B 8 VAL A 88 LEU A 90 -1 N PHE A 89 O VAL A 97 SHEET 4 B 8 LEU A 96 ASP A 103 -1 O VAL A 97 N PHE A 89 SHEET 5 B 8 THR A 106 SER A 114 -1 O THR A 106 N ASP A 103 SHEET 6 B 8 TRP A 57 ILE A 59 -1 N THR A 58 O ALA A 113 SHEET 7 B 8 THR A 106 SER A 114 -1 O ALA A 113 N THR A 58 SHEET 8 B 8 GLN A 80 TYR A 81 1 N GLN A 80 O TYR A 107 SHEET 1 C 6 THR A 106 SER A 114 0 SHEET 2 C 6 PHE A 234 VAL A 241 -1 O LEU A 237 N LEU A 112 SHEET 3 C 6 ALA A 137 GLY A 144 -1 N TRP A 142 O VAL A 236 SHEET 4 C 6 GLU A 150 GLU A 155 -1 O LEU A 151 N LEU A 143 SHEET 5 C 6 ALA A 165 ALA A 170 -1 O HIS A 169 N GLU A 150 SHEET 6 C 6 GLU A 176 ASN A 181 -1 O GLU A 176 N ALA A 170 LINK C THR A 232 N MSE A 233 1555 1555 1.33 LINK C MSE A 233 N PHE A 234 1555 1555 1.33 LINK C ASP A 257 N MSE A 258 1555 1555 1.33 LINK C MSE A 258 N LEU A 259 1555 1555 1.33 LINK O GLU A 43 CA CA A 301 1555 1555 2.36 LINK O SER A 94 CA CA A 301 1555 1555 2.46 LINK OG SER A 94 CA CA A 301 1555 1555 2.51 LINK O ASP A 261 CA CA A 301 1555 1555 2.32 LINK OD1 ASP A 261 CA CA A 301 1555 1555 2.49 LINK CA CA A 301 O HOH A 308 1555 1555 2.49 CISPEP 1 TYR A 254 PRO A 255 0 2.72 SITE 1 AC1 4 GLU A 43 SER A 94 ASP A 261 HOH A 308 SITE 1 AC2 8 ALA A 60 LYS A 61 ALA A 62 ARG A 86 SITE 2 AC2 8 ASP A 103 PG4 A 270 HOH A 393 HOH A 459 SITE 1 AC3 5 TYR A 38 GLU A 125 ASP A 208 ARG A 264 SITE 2 AC3 5 TRP A 266 SITE 1 AC4 1 LEU A 204 SITE 1 AC5 10 ALA A 60 GLU A 64 LYS A 111 ALA A 113 SITE 2 AC5 10 TRP A 142 PHE A 234 PO4 A 267 PG4 A 272 SITE 3 AC5 10 GOL A 278 HOH A 300 SITE 1 AC6 6 LYS A 61 ASP A 103 GLY A 104 ASP A 105 SITE 2 AC6 6 TYR A 108 HOH A 369 SITE 1 AC7 9 ASP A 84 ARG A 85 ARG A 86 GLU A 117 SITE 2 AC7 9 PHE A 234 PG4 A 270 HOH A 286 HOH A 288 SITE 3 AC7 9 HOH A 426 SITE 1 AC8 2 THR A 70 TRP A 162 SITE 1 AC9 5 TYR A 157 HIS A 169 TRP A 177 HOH A 342 SITE 2 AC9 5 HOH A 466 SITE 1 BC1 4 ARG A 127 TRP A 188 ARG A 190 ASP A 205 SITE 1 BC2 5 ARG A 127 ASP A 261 TRP A 262 HOH A 400 SITE 2 BC2 5 HOH A 458 SITE 1 BC3 4 GLY A 160 SER A 161 TRP A 162 211 A 280 SITE 1 BC4 8 TRP A 138 ALA A 140 TRP A 142 GLU A 150 SITE 2 BC4 8 ASP A 152 GLU A 155 PG4 A 270 HOH A 396 SITE 1 BC5 6 ASP A 91 LYS A 93 VAL A 97 SER A 172 SITE 2 BC5 6 HOH A 328 HOH A 457 SITE 1 BC6 4 TYR A 157 GLY A 158 GLY A 160 GOL A 277 CRYST1 117.420 117.420 54.909 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008516 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008516 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018212 0.00000