HEADER TRANSFERASE 27-APR-11 3RQ4 TITLE CRYSTAL STRUCTURE OF SUPPRESSOR OF VARIEGATION 4-20 HOMOLOG 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE SUV420H2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LYSINE N-METHYLTRANSFERASE 5C, SUPPRESSOR OF VARIEGATION 4- COMPND 5 20 HOMOLOG 2, SU(VAR)4-20 HOMOLOG 2, SUV4-20H2; COMPND 6 EC: 2.1.1.43; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUV420H2, KMT5C, PP7130; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3)V2RPRARE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS SUV420H2, SUPPRESSOR, VARIEGATION 4-20 HOMOLOG 2, STRUCTURAL KEYWDS 2 GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,H.ZENG,W.TEMPEL,P.LOPPNAU,C.BOUNTRA,J.WEIGELT,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,J.MIN,H.WU,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 4 03-APR-24 3RQ4 1 REMARK REVDAT 3 28-FEB-24 3RQ4 1 REMARK LINK REVDAT 2 15-JAN-14 3RQ4 1 JRNL VERSN REVDAT 1 01-JUN-11 3RQ4 0 JRNL AUTH H.WU,A.SIARHEYEVA,H.ZENG,R.LAM,A.DONG,X.H.WU,Y.LI, JRNL AUTH 2 M.SCHAPIRA,M.VEDADI,J.MIN JRNL TITL CRYSTAL STRUCTURES OF THE HUMAN HISTONE H4K20 JRNL TITL 2 METHYLTRANSFERASES SUV420H1 AND SUV420H2. JRNL REF FEBS LETT. V. 587 3859 2013 JRNL REFN ISSN 0014-5793 JRNL PMID 24396869 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 24269 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 805 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1529 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1872 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.66000 REMARK 3 B22 (A**2) : 1.37000 REMARK 3 B33 (A**2) : -0.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.122 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.163 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2029 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1412 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2765 ; 1.423 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3416 ; 0.903 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 264 ; 5.918 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;28.737 ;22.660 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 332 ;11.659 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;18.699 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 300 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2312 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 444 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1250 ; 0.777 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 505 ; 0.224 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2012 ; 1.370 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 779 ; 2.254 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 745 ; 3.635 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 243 REMARK 3 ORIGIN FOR THE GROUP (A): 20.2704 18.0271 81.0210 REMARK 3 T TENSOR REMARK 3 T11: 0.0175 T22: 0.0553 REMARK 3 T33: 0.0359 T12: 0.0000 REMARK 3 T13: -0.0005 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.2324 L22: 1.9400 REMARK 3 L33: 1.5844 L12: 0.2446 REMARK 3 L13: -0.1185 L23: -0.5682 REMARK 3 S TENSOR REMARK 3 S11: 0.0168 S12: 0.0133 S13: -0.0328 REMARK 3 S21: -0.0463 S22: 0.0005 S23: -0.0758 REMARK 3 S31: 0.1368 S32: -0.0034 S33: -0.0173 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3RQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000065239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25132 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 63.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : 0.11900 REMARK 200 FOR THE DATA SET : 26.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.35800 REMARK 200 R SYM FOR SHELL (I) : 0.35800 REMARK 200 FOR SHELL : 2.550 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: SUV420H1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG8K, 0.1MHEPES, 12% ETHYLENE REMARK 280 GLYCOL, PH 7.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.34000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.30050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.07550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.30050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.34000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.07550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL ASSEMBLY IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 PRO A 3 REMARK 465 THR A 244 REMARK 465 ARG A 245 REMARK 465 PRO A 246 REMARK 465 ARG A 247 REMARK 465 GLU A 248 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 4 CG OD1 OD2 REMARK 470 ARG A 5 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 44 NE CZ NH1 NH2 REMARK 470 GLN A 46 CG CD OE1 NE2 REMARK 470 GLU A 53 CD OE1 OE2 REMARK 470 GLU A 62 CD OE1 OE2 REMARK 470 ARG A 84 CD NE CZ NH1 NH2 REMARK 470 LYS A 130 CD CE NZ REMARK 470 LYS A 186 CD CE NZ REMARK 470 GLU A 224 CG CD OE1 OE2 REMARK 470 LYS A 225 CE NZ REMARK 470 ARG A 243 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 122 UNK UNX A 2198 1.55 REMARK 500 SG CYS A 111 UNK UNX A 2198 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 132 -2.94 83.37 REMARK 500 GLU A 157 -70.97 -113.98 REMARK 500 SER A 161 59.77 -140.40 REMARK 500 CYS A 200 -159.90 -131.31 REMARK 500 PHE A 222 63.37 -118.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 185 SG REMARK 620 2 CYS A 229 SG 105.7 REMARK 620 3 CYS A 231 SG 112.7 106.2 REMARK 620 4 CYS A 234 SG 105.7 116.1 110.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1006 DBREF 3RQ4 A 2 248 UNP Q86Y97 SV422_HUMAN 2 248 SEQRES 1 A 247 GLY PRO ASP ARG VAL THR ALA ARG GLU LEU CYS GLU ASN SEQRES 2 A 247 ASP ASP LEU ALA THR SER LEU VAL LEU ASP PRO TYR LEU SEQRES 3 A 247 GLY PHE ARG THR HIS LYS MET ASN VAL SER PRO VAL PRO SEQRES 4 A 247 PRO LEU ARG ARG GLN GLN HIS LEU ARG SER ALA LEU GLU SEQRES 5 A 247 THR PHE LEU ARG GLN ARG ASP LEU GLU ALA ALA TYR ARG SEQRES 6 A 247 ALA LEU THR LEU GLY GLY TRP THR ALA ARG TYR PHE GLN SEQRES 7 A 247 SER ARG GLY PRO ARG GLN GLU ALA ALA LEU LYS THR HIS SEQRES 8 A 247 VAL TYR ARG TYR LEU ARG ALA PHE LEU PRO GLU SER GLY SEQRES 9 A 247 PHE THR ILE LEU PRO CYS THR ARG TYR SER MET GLU THR SEQRES 10 A 247 ASN GLY ALA LYS ILE VAL SER THR ARG ALA TRP LYS LYS SEQRES 11 A 247 ASN GLU LYS LEU GLU LEU LEU VAL GLY CYS ILE ALA GLU SEQRES 12 A 247 LEU ARG GLU ALA ASP GLU GLY LEU LEU ARG ALA GLY GLU SEQRES 13 A 247 ASN ASP PHE SER ILE MET TYR SER THR ARG LYS ARG SER SEQRES 14 A 247 ALA GLN LEU TRP LEU GLY PRO ALA ALA PHE ILE ASN HIS SEQRES 15 A 247 ASP CYS LYS PRO ASN CYS LYS PHE VAL PRO ALA ASP GLY SEQRES 16 A 247 ASN ALA ALA CYS VAL LYS VAL LEU ARG ASP ILE GLU PRO SEQRES 17 A 247 GLY ASP GLU VAL THR CYS PHE TYR GLY GLU GLY PHE PHE SEQRES 18 A 247 GLY GLU LYS ASN GLU HIS CYS GLU CYS HIS THR CYS GLU SEQRES 19 A 247 ARG LYS GLY GLU GLY ALA PHE ARG THR ARG PRO ARG GLU HET ZN A1000 1 HET SAM A 500 27 HET EDO A1006 4 HET UNX A2194 1 HET UNX A2195 1 HET UNX A2196 1 HET UNX A2197 1 HET UNX A2198 1 HET UNX A2199 1 HET UNX A2200 1 HET UNX A2201 1 HET UNX A2202 1 HET UNX A2203 1 HET UNX A2204 1 HET UNX A2205 1 HET UNX A2206 1 HET UNX A2207 1 HET UNX A2208 1 HET UNX A2209 1 HET UNX A2210 1 HET UNX A2211 1 HET UNX A2212 1 HET UNX A2213 1 HET UNX A2214 1 HET UNX A2215 1 HET UNX A2216 1 HET UNX A2217 1 HET UNX A2218 1 HET UNX A2219 1 HET UNX A2220 1 HET UNX A2221 1 HETNAM ZN ZINC ION HETNAM SAM S-ADENOSYLMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM UNX UNKNOWN ATOM OR ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ZN ZN 2+ FORMUL 3 SAM C15 H22 N6 O5 S FORMUL 4 EDO C2 H6 O2 FORMUL 5 UNX 28(X) FORMUL 33 HOH *230(H2 O) HELIX 1 1 THR A 7 GLY A 28 1 22 HELIX 2 2 ARG A 44 ARG A 59 1 16 HELIX 3 3 ASP A 60 LEU A 70 1 11 HELIX 4 4 GLY A 82 PHE A 100 1 19 HELIX 5 5 LEU A 101 SER A 104 5 4 HELIX 6 6 ARG A 146 LEU A 153 5 8 HELIX 7 7 GLY A 176 ILE A 181 5 6 HELIX 8 8 GLY A 223 GLU A 227 5 5 HELIX 9 9 CYS A 231 GLY A 238 1 8 HELIX 10 10 GLU A 239 ARG A 243 5 5 SHEET 1 A 2 PHE A 106 PRO A 110 0 SHEET 2 A 2 ALA A 121 SER A 125 -1 O VAL A 124 N THR A 107 SHEET 1 B 5 ILE A 162 SER A 165 0 SHEET 2 B 5 SER A 170 LEU A 175 -1 O SER A 170 N SER A 165 SHEET 3 B 5 LYS A 134 GLU A 144 -1 N CYS A 141 O LEU A 175 SHEET 4 B 5 ALA A 198 VAL A 203 -1 O VAL A 201 N LEU A 135 SHEET 5 B 5 CYS A 189 ALA A 194 -1 N LYS A 190 O LYS A 202 SHEET 1 C 2 ASN A 182 HIS A 183 0 SHEET 2 C 2 THR A 214 CYS A 215 1 O CYS A 215 N ASN A 182 LINK SG CYS A 185 ZN ZN A1000 1555 1555 2.39 LINK SG CYS A 229 ZN ZN A1000 1555 1555 2.33 LINK SG CYS A 231 ZN ZN A1000 1555 1555 2.29 LINK SG CYS A 234 ZN ZN A1000 1555 1555 2.32 SITE 1 AC1 4 CYS A 185 CYS A 229 CYS A 231 CYS A 234 SITE 1 AC2 22 HIS A 32 TYR A 114 MET A 116 GLU A 117 SITE 2 AC2 22 GLY A 120 ALA A 121 PHE A 160 ARG A 169 SITE 3 AC2 22 ALA A 179 PHE A 180 ILE A 181 ASN A 182 SITE 4 AC2 22 HIS A 183 TYR A 217 PHE A 222 CYS A 229 SITE 5 AC2 22 GLU A 230 CYS A 231 HOH A 259 HOH A 262 SITE 6 AC2 22 HOH A 266 EDO A1006 SITE 1 AC3 7 ASP A 159 PHE A 160 SER A 161 ILE A 162 SITE 2 AC3 7 PHE A 221 HOH A 370 SAM A 500 CRYST1 34.680 60.151 126.601 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028835 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007899 0.00000